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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Aug 26;65(Pt 9):o2237. doi: 10.1107/S160053680903311X

(E)-N′-(3,5-Dibromo-2-hydroxy­benzyl­idene)-2-nitro­benzohydrazide methanol solvate

Heng-Yu Qian a,*, Da-Ping Qu b
PMCID: PMC2969957  PMID: 21577635

Abstract

In the title compound, C14H9Br2N3O4·CH3OH, the Schiff base mol­ecule adopts an E geometry with respect to the C=N bond and the benzene rings are oriented at a dihedral angle of 45.3 (2)°. An intra­molecular O—H⋯N hydrogen bond helps to establish the conformation. In the crystal, the methanol solvent mol­ecule is linked to the Schiff base mol­ecule through an O—H⋯O hydrogen bond and inter­molecular N—H⋯O hydrogen bonds link the components to form layers parallel to the bc direction.

Related literature

For our previous work in this area, see: Yin, Qian et al. (2007); Yin, Guo et al. (2007); Qian et al. (2009).graphic file with name e-65-o2237-scheme1.jpg

Experimental

Crystal data

  • C14H9Br2N3O4·CH4O

  • M r = 475.10

  • Monoclinic, Inline graphic

  • a = 18.981 (1) Å

  • b = 10.054 (2) Å

  • c = 19.746 (2) Å

  • β = 110.974 (2)°

  • V = 3518.6 (8) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 4.64 mm−1

  • T = 298 K

  • 0.18 × 0.17 × 0.16 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.490, T max = 0.524

  • 10461 measured reflections

  • 3784 independent reflections

  • 2670 reflections with I > 2σ(I)

  • R int = 0.041

Refinement

  • R[F 2 > 2σ(F 2)] = 0.036

  • wR(F 2) = 0.094

  • S = 1.02

  • 3784 reflections

  • 232 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.36 e Å−3

  • Δρmin = −0.66 e Å−3

Data collection: SMART (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903311X/hb5053sup1.cif

e-65-o2237-sup1.cif (17KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680903311X/hb5053Isup2.hkl

e-65-o2237-Isup2.hkl (185.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1⋯N1 0.82 1.87 2.587 (3) 146
O5—H5⋯O2 0.82 1.94 2.735 (4) 165
N2—H2⋯O5i 0.893 (10) 1.958 (13) 2.840 (3) 169 (4)

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

As part of our ongoing studies of Schiff bases (Yin, Qian et al., 2007; Yin, Guo et al., 2007; Qian et al., 2009), we now report the synthesis and structure of the title compound, (I), (Fig. 1).

The Schiff base molecule adopts an E geometry with respect to the C=N bond, and there forms an intramolecular O—H···N hydrogen bond. The two benzene rings forms a dihedral angle of 45.3 (2)°. The dihedral angle between the O3/N3/O4 plane and the C9—C14 benzene ring is 37.1 (2)°. The methanol molecule is linked to the Schiff base molecule through the O—H···O hydrogen bond (Table 1). In the crystal structure, molecules are linked through intermolecular N—H···O hydrogen bonds (Table 1) to form layers parallel to the bc direction (Fig. 2).

Experimental

2-Nitrobenzohydrazide (1 mmol, 0.181 g) and 3,5-dibromosalicylaldehyde (1 mmol, 0.280 g) were dissolved in anhydrous methanol (15 ml). The mixture was stirred for several minutes at room temperature. The product was isolated and recrystallized from methanol, colourless blocks of (I) were obtained after five days.

Refinement

The imino H atom was located in a difference map and its positional parameters were refined with a fixed isotropic thermal parameter of 0.08 Å2. Other H atoms were positioned geometrically and refined as riding with C—H = 0.93 Å (aromatic) and 0.96 Å (methyl), O—H = 0.82 Å, and with Uiso(H) = 1.2Ueq(C) and 1.5Ueq(C15 and O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I). Displacement ellipsoids are drawn at the 30% probability level. Hydrogen bonding is shown as dashed lines.

Fig. 2.

Fig. 2.

The molecular packing of the title compound, viewed along the b axis. Hydrogen bonding is shown in dashed lines.

Crystal data

C14H9Br2N3O4·CH4O F(000) = 1872
Mr = 475.10 Dx = 1.794 Mg m3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 3081 reflections
a = 18.981 (1) Å θ = 2.7–25.0°
b = 10.054 (2) Å µ = 4.64 mm1
c = 19.746 (2) Å T = 298 K
β = 110.974 (2)° Block, colourless
V = 3518.6 (8) Å3 0.18 × 0.17 × 0.16 mm
Z = 8

Data collection

Bruker SMART CCD diffractometer 3784 independent reflections
Radiation source: fine-focus sealed tube 2670 reflections with I > 2σ(I)
graphite Rint = 0.041
ω scans θmax = 26.9°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −24→20
Tmin = 0.490, Tmax = 0.524 k = −12→12
10461 measured reflections l = −19→25

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094 H atoms treated by a mixture of independent and constrained refinement
S = 1.02 w = 1/[σ2(Fo2) + (0.0488P)2] where P = (Fo2 + 2Fc2)/3
3784 reflections (Δ/σ)max < 0.001
232 parameters Δρmax = 0.36 e Å3
1 restraint Δρmin = −0.65 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.07056 (2) 0.15611 (4) 0.382792 (19) 0.05768 (14)
Br2 0.14655 (2) 0.69346 (4) 0.365230 (19) 0.06064 (15)
O1 0.16461 (14) 0.1962 (2) 0.53986 (11) 0.0507 (6)
H1 0.1901 0.2081 0.5828 0.076*
O2 0.26477 (13) 0.1296 (2) 0.74915 (11) 0.0556 (6)
O3 0.42343 (15) 0.0570 (3) 0.78985 (13) 0.0758 (8)
O4 0.43759 (18) −0.0577 (3) 0.88592 (14) 0.0873 (9)
O5 0.12161 (14) 0.0782 (2) 0.74447 (13) 0.0640 (7)
H5 0.1605 0.1003 0.7384 0.096*
N1 0.25316 (14) 0.3244 (2) 0.65150 (13) 0.0403 (6)
N2 0.30067 (15) 0.3314 (2) 0.72253 (13) 0.0421 (6)
N3 0.42213 (15) 0.0446 (3) 0.85052 (15) 0.0526 (7)
C1 0.20261 (16) 0.4236 (3) 0.53512 (14) 0.0357 (6)
C2 0.16312 (16) 0.3082 (3) 0.50269 (15) 0.0369 (7)
C3 0.12163 (17) 0.3109 (3) 0.42817 (15) 0.0391 (7)
C4 0.11755 (16) 0.4237 (3) 0.38783 (15) 0.0429 (7)
H4 0.0893 0.4242 0.3384 0.052*
C5 0.15566 (17) 0.5361 (3) 0.42122 (15) 0.0422 (7)
C6 0.19789 (16) 0.5366 (3) 0.49391 (15) 0.0405 (7)
H6 0.2235 0.6133 0.5156 0.049*
C7 0.24867 (16) 0.4255 (3) 0.61175 (15) 0.0390 (7)
H7 0.2753 0.5021 0.6320 0.047*
C8 0.30280 (16) 0.2312 (3) 0.76752 (16) 0.0384 (7)
C9 0.35228 (16) 0.2548 (3) 0.84468 (15) 0.0365 (7)
C10 0.40432 (17) 0.1623 (3) 0.88545 (15) 0.0391 (7)
C11 0.4444 (2) 0.1791 (3) 0.95794 (16) 0.0517 (9)
H11 0.4787 0.1150 0.9840 0.062*
C12 0.4331 (2) 0.2913 (4) 0.99107 (18) 0.0608 (10)
H12 0.4601 0.3039 1.0402 0.073*
C13 0.3827 (2) 0.3856 (4) 0.95328 (18) 0.0622 (10)
H13 0.3756 0.4621 0.9766 0.075*
C14 0.34200 (19) 0.3670 (3) 0.87998 (16) 0.0494 (8)
H14 0.3074 0.4312 0.8544 0.059*
C15 0.0603 (2) 0.1292 (4) 0.6894 (2) 0.0898 (15)
H15A 0.0148 0.0934 0.6928 0.135*
H15B 0.0634 0.1056 0.6435 0.135*
H15C 0.0599 0.2243 0.6937 0.135*
H2 0.3299 (18) 0.403 (2) 0.7369 (19) 0.080*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.0549 (2) 0.0620 (2) 0.0483 (2) −0.01531 (16) 0.00887 (17) −0.01568 (16)
Br2 0.0684 (3) 0.0597 (2) 0.0450 (2) 0.00128 (17) 0.00967 (18) 0.02143 (16)
O1 0.0630 (16) 0.0411 (12) 0.0378 (12) −0.0092 (10) 0.0055 (11) 0.0045 (10)
O2 0.0565 (15) 0.0490 (13) 0.0457 (13) −0.0159 (11) −0.0007 (11) 0.0061 (10)
O3 0.095 (2) 0.091 (2) 0.0403 (15) 0.0193 (16) 0.0228 (14) −0.0040 (13)
O4 0.131 (3) 0.0544 (16) 0.0632 (17) 0.0358 (16) 0.0182 (17) 0.0122 (14)
O5 0.0643 (17) 0.0531 (15) 0.0629 (15) 0.0092 (13) 0.0086 (13) 0.0013 (12)
N1 0.0377 (15) 0.0457 (15) 0.0276 (12) −0.0015 (10) −0.0005 (11) 0.0039 (10)
N2 0.0436 (16) 0.0422 (15) 0.0268 (12) −0.0059 (11) −0.0041 (11) 0.0071 (11)
N3 0.0528 (18) 0.0576 (18) 0.0380 (16) 0.0095 (13) 0.0051 (13) 0.0014 (13)
C1 0.0332 (17) 0.0404 (16) 0.0293 (14) −0.0005 (12) 0.0062 (12) 0.0007 (12)
C2 0.0336 (17) 0.0408 (16) 0.0339 (15) 0.0000 (12) 0.0091 (13) 0.0012 (13)
C3 0.0345 (17) 0.0461 (17) 0.0333 (16) −0.0041 (12) 0.0080 (13) −0.0061 (13)
C4 0.0366 (18) 0.061 (2) 0.0263 (15) 0.0010 (14) 0.0054 (13) 0.0032 (14)
C5 0.0431 (19) 0.0491 (19) 0.0317 (15) 0.0051 (13) 0.0100 (13) 0.0102 (13)
C6 0.0414 (18) 0.0387 (17) 0.0362 (16) −0.0008 (13) 0.0075 (13) 0.0038 (13)
C7 0.0398 (18) 0.0382 (16) 0.0313 (15) −0.0013 (12) 0.0034 (13) 0.0032 (13)
C8 0.0325 (17) 0.0425 (17) 0.0343 (15) 0.0014 (13) 0.0049 (13) 0.0040 (13)
C9 0.0386 (17) 0.0378 (15) 0.0308 (14) −0.0031 (12) 0.0097 (13) 0.0061 (12)
C10 0.0412 (19) 0.0422 (17) 0.0300 (15) −0.0001 (12) 0.0078 (13) 0.0036 (12)
C11 0.055 (2) 0.058 (2) 0.0309 (17) 0.0027 (15) 0.0018 (15) 0.0105 (15)
C12 0.081 (3) 0.064 (2) 0.0268 (16) −0.0072 (19) 0.0065 (17) −0.0010 (16)
C13 0.093 (3) 0.051 (2) 0.041 (2) −0.0017 (19) 0.022 (2) −0.0061 (16)
C14 0.059 (2) 0.0438 (19) 0.0419 (19) 0.0029 (15) 0.0138 (17) 0.0044 (14)
C15 0.080 (3) 0.075 (3) 0.081 (3) 0.018 (2) −0.013 (3) −0.005 (2)

Geometric parameters (Å, °)

Br1—C3 1.882 (3) C4—C5 1.377 (4)
Br2—C5 1.902 (3) C4—H4 0.9300
O1—C2 1.338 (3) C5—C6 1.371 (4)
O1—H1 0.8200 C6—H6 0.9300
O2—C8 1.228 (4) C7—H7 0.9300
O3—N3 1.214 (3) C8—C9 1.495 (4)
O4—N3 1.218 (4) C9—C14 1.376 (5)
O5—C15 1.376 (4) C9—C10 1.385 (4)
O5—H5 0.8200 C10—C11 1.370 (4)
N1—C7 1.269 (4) C11—C12 1.359 (5)
N1—N2 1.371 (3) C11—H11 0.9300
N2—C8 1.335 (4) C12—C13 1.364 (5)
N2—H2 0.893 (10) C12—H12 0.9300
N3—C10 1.469 (4) C13—C14 1.388 (4)
C1—C6 1.382 (4) C13—H13 0.9300
C1—C2 1.405 (4) C14—H14 0.9300
C1—C7 1.452 (4) C15—H15A 0.9600
C2—C3 1.399 (4) C15—H15B 0.9600
C3—C4 1.372 (4) C15—H15C 0.9600
C2—O1—H1 109.5 C1—C7—H7 119.5
C15—O5—H5 109.5 O2—C8—N2 123.8 (3)
C7—N1—N2 117.7 (2) O2—C8—C9 121.4 (3)
C8—N2—N1 119.6 (2) N2—C8—C9 114.6 (3)
C8—N2—H2 122 (2) C14—C9—C10 117.2 (3)
N1—N2—H2 118 (2) C14—C9—C8 119.7 (3)
O3—N3—O4 124.6 (3) C10—C9—C8 122.9 (3)
O3—N3—C10 118.0 (3) C11—C10—C9 122.6 (3)
O4—N3—C10 117.3 (3) C11—C10—N3 117.0 (3)
C6—C1—C2 120.0 (3) C9—C10—N3 120.3 (3)
C6—C1—C7 119.4 (3) C12—C11—C10 118.7 (3)
C2—C1—C7 120.7 (3) C12—C11—H11 120.6
O1—C2—C3 119.1 (3) C10—C11—H11 120.6
O1—C2—C1 122.8 (2) C11—C12—C13 121.0 (3)
C3—C2—C1 118.1 (3) C11—C12—H12 119.5
C4—C3—C2 121.4 (3) C13—C12—H12 119.5
C4—C3—Br1 119.6 (2) C12—C13—C14 119.8 (3)
C2—C3—Br1 119.0 (2) C12—C13—H13 120.1
C3—C4—C5 119.3 (3) C14—C13—H13 120.1
C3—C4—H4 120.3 C9—C14—C13 120.8 (3)
C5—C4—H4 120.3 C9—C14—H14 119.6
C6—C5—C4 121.0 (3) C13—C14—H14 119.6
C6—C5—Br2 120.2 (2) O5—C15—H15A 109.5
C4—C5—Br2 118.8 (2) O5—C15—H15B 109.5
C5—C6—C1 120.3 (3) H15A—C15—H15B 109.5
C5—C6—H6 119.9 O5—C15—H15C 109.5
C1—C6—H6 119.9 H15A—C15—H15C 109.5
N1—C7—C1 121.1 (3) H15B—C15—H15C 109.5
N1—C7—H7 119.5

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O1—H1···N1 0.82 1.87 2.587 (3) 146
O5—H5···O2 0.82 1.94 2.735 (4) 165
N2—H2···O5i 0.89 (1) 1.96 (1) 2.840 (3) 169 (4)

Symmetry codes: (i) −x+1/2, y+1/2, −z+3/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5053).

References

  1. Bruker (2001). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Bruker (2007). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Qian, H., Yin, Z. & Yao, Z. (2009). Acta Cryst. E65, o2155. [DOI] [PMC free article] [PubMed]
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Yin, Z., Guo, S., Qian, H. & Feng, Y. (2007). Acta Cryst. E63, o4407.
  6. Yin, Z.-G., Qian, H.-Y., Jie, H. & Yu-Li, F. (2007). Acta Cryst. E63, o4406.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903311X/hb5053sup1.cif

e-65-o2237-sup1.cif (17KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680903311X/hb5053Isup2.hkl

e-65-o2237-Isup2.hkl (185.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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