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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Aug 29;65(Pt 9):o2269. doi: 10.1107/S1600536809033509

5-(4-Bromo­phen­yl)-2-methyl-3-methyl­sulfinyl-1-benzofuran

Hong Dae Choi a, Pil Ja Seo a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC2969963  PMID: 21577664

Abstract

In the title compound, C16H13BrO2S, the O atom and the methyl group of the methyl­sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. The 4-bromo­phenyl ring is rotated out of the benzofuran plane, making a dihedral angle of 39.23 (8)°. The crystal structure exhibits weak non-classical inter­molecular C—H⋯O hydrogen bonds and two inter­molecular C—H⋯π inter­actions.

Related literature

For the crystal structures of similar 5-aryl-2-methyl-1-benzofuran derivatives, see: Choi et al. (2006a,b ). For the pharmacological activity of benzofuran compounds, see: Howlett et al. (1999); Twyman & Allsop (1999). For natural products with benzofuran rings, see: Akgul & Anil (2003); von Reuss & König (2004).graphic file with name e-65-o2269-scheme1.jpg

Experimental

Crystal data

  • C16H13BrO2S

  • M r = 349.23

  • Monoclinic, Inline graphic

  • a = 11.410 (1) Å

  • b = 7.9508 (8) Å

  • c = 15.728 (2) Å

  • β = 99.399 (1)°

  • V = 1407.7 (3) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 3.07 mm−1

  • T = 173 K

  • 0.30 × 0.30 × 0.20 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2000) T min = 0.460, T max = 0.579

  • 8551 measured reflections

  • 3195 independent reflections

  • 2551 reflections with I > 2σ(I)

  • R int = 0.035

Refinement

  • R[F 2 > 2σ(F 2)] = 0.028

  • wR(F 2) = 0.076

  • S = 1.04

  • 3195 reflections

  • 183 parameters

  • H-atom parameters constrained

  • Δρmax = 0.52 e Å−3

  • Δρmin = −0.43 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033509/zl2233sup1.cif

e-65-o2269-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033509/zl2233Isup2.hkl

e-65-o2269-Isup2.hkl (156.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C10—H10⋯O2i 0.93 2.66 3.416 (3) 139
C15—H15B⋯O1ii 0.96 2.66 3.380 (3) 132
C16—H16A⋯O2i 0.96 2.63 3.463 (3) 145
C13—H13⋯Cg2iii 0.93 2.86 3.624 (3) 140
C16—H16BCg1iv 0.96 2.90 3.768 (3) 152

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic. Cg1 and Cg2 are the centroids of the C9–C14 phenyl ring and the C1/C2/C7/O2/C8 furan ring, respectively.

supplementary crystallographic information

Comment

Benzofuran ring systems have attracted particular interest in the view of their pharmacological properties (Howlett et al., 1999; Twyman & Allsop, 1999), and these compounds are occurring in natural products (Akgul & Anil, 2003; von Reuss & König, 2004). As a part of our ongoing studies on the synthesis and structures of 5-aryl-2-methyl-1-benzofuran analogues, the crystal structure of 5-(4-bromophenyl)-2-methyl-3-methylsulfanyl-1-benzofuran (Choi et al., 2006a) and 2-methyl-3-methylsulfinyl-5-phenyl-1-benzofuran (Choi et al., 2006b) have been described in the literature. Here we report the crystal structure of the title compound (Fig. 1).

The benzofuran unit is essentially planar, with a mean deviation of 0.005 (2) Å from the least-squares plane defined by the nine constituent atoms. The 4-bromophenyl ring is rotated out of the benzofuran plane, with a dihedral angle of 39.23 (8)°. The molecular packing (Fig. 2) is stabilized by weak non-classical intermolecular C–H···O hydrogen bonds; the first between the 4-bromophenyl H atom and the furan O atom, with C10–H10···O2i, the second between the methyl H atom and the oxygen of the S═O unit, with C15–H15B···O1ii, the third between the methyl H atom of the methylsulfinyl substituent and the furan O atom, with C16–H16A···O2i, respectively (Table 1). The crystal packing (Fig. 3) is further stabilized by two intermolecular C–H···π interactions; the first between the 4-bromophenyl H atom and the furan ring of a neighbouring molecule, with C13–H13···Cg2iii, the second between the methyl H atom of the methylsulfinyl substituent and the 4-bromophenyl ring of an adjacent molecule, with C16–H16B···Cg1iv, respectively (Table 1; Cg1 and Cg2 are the centroids of the C9-C14 phenyl ring and the C1/C2/C7/O2/C8 furan ring, respectively).

Experimental

77% 3-chloroperoxybenzoic acid (247 mg, 1.1 mmol) was added in small portions to a stirred solution of 5-(4-bromophenyl)-2-methyl-3-methylsulfanyl-1-benzofuran (333 mg, 1.0 mmol) in dichloromethane (40 ml) at 273 K. After being stirred for 4 hr at room temperature, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by column chromatography (ethyl acetate) to afford the title compound as a colorless solid [yield 78%, m.p. 458-459 K; Rf = 0.31 (ethyl acetate)]. Single crystals suitable for X-ray diffraction were prepared by evaporation of a solution of the title compound in acetone at room temperature. Spectroscopic analysis; EI-MS 348 [M+], 350 [M+2].

Refinement

All H atoms were geometrically positioned and refined using a riding model, with C–H = 0.93 Å for the aryl and 0.96 Å for the methyl H atoms. Uiso(H) = 1.2Ueq(C) for the aryl and 1.5Ueq(C) for the methyl H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

C–H···O interactions (dotted lines) in the title compound. [Symmetry codes: (i) -x+1, -y, -z+1; (ii) -x+2, -y+1, -z+1.]

Fig. 3.

Fig. 3.

C–H···π interactions (dotted lines) in the title compound. Cg denotes the ring centroids. [Symmetry codes: (iii) -x+1, y+1/2, -z+1/2; (iv) -x + 1, -y+1, -z+1.]

Crystal data

C16H13BrO2S F(000) = 704
Mr = 349.23 Dx = 1.648 Mg m3
Monoclinic, P21/c Melting point = 458–459 K
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 11.410 (1) Å Cell parameters from 4055 reflections
b = 7.9508 (8) Å θ = 2.4–27.5°
c = 15.728 (2) Å µ = 3.07 mm1
β = 99.399 (1)° T = 173 K
V = 1407.7 (3) Å3 Block, colorless
Z = 4 0.30 × 0.30 × 0.20 mm

Data collection

Bruker SMART CCD diffractometer 3195 independent reflections
Radiation source: fine-focus sealed tube 2551 reflections with I > 2σ(I)
graphite Rint = 0.035
Detector resolution: 10.0 pixels mm-1 θmax = 27.5°, θmin = 1.8°
φ and ω scans h = −14→14
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) k = −10→10
Tmin = 0.460, Tmax = 0.579 l = −13→20
8551 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028 Hydrogen site location: difference Fourier map
wR(F2) = 0.076 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0363P)2 + 0.3706P] where P = (Fo2 + 2Fc2)/3
3195 reflections (Δ/σ)max = 0.001
183 parameters Δρmax = 0.52 e Å3
0 restraints Δρmin = −0.43 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br −0.03613 (2) 0.52211 (3) 0.242047 (16) 0.03659 (10)
S 0.73123 (5) 0.01241 (6) 0.54088 (4) 0.02489 (13)
O1 0.86485 (12) 0.41164 (18) 0.44262 (10) 0.0257 (3)
O2 0.64757 (15) −0.0857 (2) 0.47714 (11) 0.0356 (4)
C1 0.75941 (18) 0.2037 (2) 0.49091 (13) 0.0212 (4)
C2 0.67604 (18) 0.3123 (2) 0.43719 (13) 0.0210 (4)
C3 0.55377 (18) 0.3170 (2) 0.41169 (13) 0.0225 (4)
H3 0.5054 0.2356 0.4306 0.027*
C4 0.50462 (19) 0.4463 (3) 0.35708 (14) 0.0226 (4)
C5 0.5801 (2) 0.5711 (3) 0.33141 (15) 0.0264 (5)
H5 0.5463 0.6577 0.2959 0.032*
C6 0.7013 (2) 0.5696 (3) 0.35685 (14) 0.0273 (5)
H6 0.7499 0.6525 0.3397 0.033*
C7 0.74681 (18) 0.4375 (3) 0.40949 (14) 0.0229 (4)
C8 0.86971 (18) 0.2669 (3) 0.49163 (14) 0.0238 (4)
C9 0.37431 (19) 0.4570 (2) 0.32810 (14) 0.0222 (4)
C10 0.29488 (19) 0.4165 (3) 0.38373 (13) 0.0235 (4)
H10 0.3242 0.3774 0.4388 0.028*
C11 0.17330 (19) 0.4334 (3) 0.35854 (14) 0.0256 (5)
H11 0.1214 0.4053 0.3962 0.031*
C12 0.1300 (2) 0.4926 (3) 0.27679 (15) 0.0263 (5)
C13 0.2063 (2) 0.5303 (3) 0.21940 (15) 0.0307 (5)
H13 0.1763 0.5679 0.1641 0.037*
C14 0.3277 (2) 0.5114 (3) 0.24500 (15) 0.0283 (5)
H14 0.3789 0.5353 0.2063 0.034*
C15 0.98997 (18) 0.2164 (3) 0.53466 (16) 0.0308 (5)
H15A 0.9851 0.1114 0.5640 0.046*
H15B 1.0215 0.3012 0.5756 0.046*
H15C 1.0411 0.2040 0.4923 0.046*
C16 0.6480 (2) 0.0947 (3) 0.61869 (15) 0.0338 (5)
H16A 0.5756 0.1439 0.5895 0.051*
H16B 0.6942 0.1790 0.6528 0.051*
H16C 0.6296 0.0054 0.6554 0.051*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br 0.02728 (13) 0.04720 (17) 0.03369 (15) 0.00609 (10) 0.00023 (10) −0.00305 (11)
S 0.0277 (3) 0.0206 (3) 0.0263 (3) −0.0030 (2) 0.0041 (2) 0.0032 (2)
O1 0.0247 (8) 0.0238 (8) 0.0286 (8) −0.0054 (6) 0.0047 (6) 0.0041 (6)
O2 0.0416 (10) 0.0281 (8) 0.0358 (9) −0.0115 (7) 0.0027 (8) −0.0036 (7)
C1 0.0264 (10) 0.0180 (10) 0.0195 (10) −0.0035 (8) 0.0044 (8) −0.0012 (8)
C2 0.0285 (11) 0.0174 (9) 0.0178 (10) −0.0026 (8) 0.0062 (8) −0.0021 (8)
C3 0.0271 (11) 0.0181 (10) 0.0231 (11) −0.0043 (8) 0.0061 (9) −0.0005 (8)
C4 0.0267 (11) 0.0221 (10) 0.0199 (10) −0.0006 (8) 0.0060 (9) −0.0022 (8)
C5 0.0327 (12) 0.0228 (10) 0.0247 (11) 0.0015 (9) 0.0079 (9) 0.0047 (9)
C6 0.0327 (12) 0.0219 (11) 0.0294 (12) −0.0049 (9) 0.0112 (10) 0.0032 (9)
C7 0.0254 (11) 0.0216 (10) 0.0224 (11) −0.0042 (8) 0.0059 (9) −0.0034 (9)
C8 0.0287 (11) 0.0207 (10) 0.0226 (11) −0.0036 (9) 0.0059 (9) −0.0003 (8)
C9 0.0281 (11) 0.0172 (9) 0.0215 (11) 0.0001 (8) 0.0042 (9) −0.0002 (8)
C10 0.0319 (11) 0.0208 (10) 0.0178 (10) 0.0004 (9) 0.0041 (9) 0.0023 (8)
C11 0.0289 (11) 0.0265 (11) 0.0227 (11) −0.0022 (9) 0.0080 (9) −0.0001 (9)
C12 0.0253 (11) 0.0266 (11) 0.0264 (12) 0.0017 (8) 0.0023 (9) −0.0027 (9)
C13 0.0354 (12) 0.0350 (12) 0.0210 (11) 0.0005 (10) 0.0024 (10) 0.0047 (10)
C14 0.0310 (12) 0.0336 (12) 0.0216 (11) −0.0014 (9) 0.0080 (9) 0.0035 (9)
C15 0.0259 (11) 0.0283 (12) 0.0376 (13) −0.0052 (9) 0.0036 (10) 0.0024 (10)
C16 0.0380 (13) 0.0381 (13) 0.0268 (12) −0.0047 (10) 0.0103 (10) 0.0019 (10)

Geometric parameters (Å, °)

Br—C12 1.900 (2) C8—C15 1.483 (3)
S—O2 1.4874 (17) C9—C10 1.396 (3)
S—C1 1.766 (2) C9—C14 1.397 (3)
S—C16 1.791 (2) C10—C11 1.386 (3)
O1—C7 1.378 (3) C10—H10 0.9300
O1—C8 1.381 (2) C11—C12 1.382 (3)
C1—C8 1.353 (3) C11—H11 0.9300
C1—C2 1.450 (3) C12—C13 1.385 (3)
C2—C3 1.388 (3) C13—C14 1.386 (3)
C2—C7 1.396 (3) C13—H13 0.9300
C3—C4 1.397 (3) C14—H14 0.9300
C3—H3 0.9300 C15—H15A 0.9600
C4—C5 1.415 (3) C15—H15B 0.9600
C4—C9 1.485 (3) C15—H15C 0.9600
C5—C6 1.376 (3) C16—H16A 0.9600
C5—H5 0.9300 C16—H16B 0.9600
C6—C7 1.385 (3) C16—H16C 0.9600
C6—H6 0.9300
O2—S—C1 107.18 (10) C10—C9—C4 120.96 (19)
O2—S—C16 107.39 (11) C14—C9—C4 120.94 (19)
C1—S—C16 98.32 (11) C11—C10—C9 121.36 (19)
C7—O1—C8 106.44 (15) C11—C10—H10 119.3
C8—C1—C2 107.74 (17) C9—C10—H10 119.3
C8—C1—S 123.55 (16) C12—C11—C10 119.2 (2)
C2—C1—S 128.51 (15) C12—C11—H11 120.4
C3—C2—C7 119.74 (19) C10—C11—H11 120.4
C3—C2—C1 135.85 (18) C11—C12—C13 120.8 (2)
C7—C2—C1 104.40 (17) C11—C12—Br 119.84 (17)
C2—C3—C4 118.77 (19) C13—C12—Br 119.31 (18)
C2—C3—H3 120.6 C12—C13—C14 119.5 (2)
C4—C3—H3 120.6 C12—C13—H13 120.3
C3—C4—C5 119.3 (2) C14—C13—H13 120.3
C3—C4—C9 120.81 (19) C13—C14—C9 121.0 (2)
C5—C4—C9 119.84 (19) C13—C14—H14 119.5
C6—C5—C4 122.7 (2) C9—C14—H14 119.5
C6—C5—H5 118.6 C8—C15—H15A 109.5
C4—C5—H5 118.6 C8—C15—H15B 109.5
C5—C6—C7 116.20 (19) H15A—C15—H15B 109.5
C5—C6—H6 121.9 C8—C15—H15C 109.5
C7—C6—H6 121.9 H15A—C15—H15C 109.5
O1—C7—C6 125.96 (18) H15B—C15—H15C 109.5
O1—C7—C2 110.80 (18) S—C16—H16A 109.5
C6—C7—C2 123.2 (2) S—C16—H16B 109.5
C1—C8—O1 110.61 (18) H16A—C16—H16B 109.5
C1—C8—C15 133.9 (2) S—C16—H16C 109.5
O1—C8—C15 115.47 (17) H16A—C16—H16C 109.5
C10—C9—C14 118.1 (2) H16B—C16—H16C 109.5
O2—S—C1—C8 −131.80 (18) C1—C2—C7—C6 −179.2 (2)
C16—S—C1—C8 117.0 (2) C2—C1—C8—O1 0.7 (2)
O2—S—C1—C2 42.4 (2) S—C1—C8—O1 175.91 (14)
C16—S—C1—C2 −68.8 (2) C2—C1—C8—C15 178.9 (2)
C8—C1—C2—C3 −179.4 (2) S—C1—C8—C15 −5.9 (4)
S—C1—C2—C3 5.6 (4) C7—O1—C8—C1 −0.7 (2)
C8—C1—C2—C7 −0.3 (2) C7—O1—C8—C15 −179.28 (18)
S—C1—C2—C7 −175.27 (16) C3—C4—C9—C10 37.8 (3)
C7—C2—C3—C4 1.3 (3) C5—C4—C9—C10 −140.3 (2)
C1—C2—C3—C4 −179.7 (2) C3—C4—C9—C14 −143.6 (2)
C2—C3—C4—C5 −1.8 (3) C5—C4—C9—C14 38.3 (3)
C2—C3—C4—C9 −179.89 (19) C14—C9—C10—C11 −1.6 (3)
C3—C4—C5—C6 1.1 (3) C4—C9—C10—C11 177.03 (19)
C9—C4—C5—C6 179.2 (2) C9—C10—C11—C12 −0.4 (3)
C4—C5—C6—C7 0.2 (3) C10—C11—C12—C13 1.9 (3)
C8—O1—C7—C6 179.6 (2) C10—C11—C12—Br −178.41 (16)
C8—O1—C7—C2 0.5 (2) C11—C12—C13—C14 −1.3 (3)
C5—C6—C7—O1 −179.8 (2) Br—C12—C13—C14 179.01 (16)
C5—C6—C7—C2 −0.8 (3) C12—C13—C14—C9 −0.8 (3)
C3—C2—C7—O1 179.17 (17) C10—C9—C14—C13 2.2 (3)
C1—C2—C7—O1 −0.1 (2) C4—C9—C14—C13 −176.4 (2)
C3—C2—C7—C6 0.1 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C10—H10···O2i 0.93 2.66 3.416 (3) 139
C15—H15B···O1ii 0.96 2.66 3.380 (3) 132
C16—H16A···O2i 0.96 2.63 3.463 (3) 145
C13—H13···Cg2iii 0.93 2.86 3.624 (3) 140
C16—H16B···Cg1iv 0.96 2.90 3.768 (3) 152

Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+2, −y+1, −z+1; (iii) −x+1, y+1/2, −z+1/2; (iv) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZL2233).

References

  1. Akgul, Y. Y. & Anil, H. (2003). Phytochemistry, 63, 939–943. [DOI] [PubMed]
  2. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  3. Bruker (2001). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Choi, H. D., Seo, P. J., Lee, H. K., Son, B. W. & Lee, U. (2006b). Acta Cryst. E62, o4480–o4481.
  5. Choi, H. D., Woo, H. M., Seo, P. J., Son, B. W. & Lee, U. (2006a). Acta Cryst. E62, o4253–o4254.
  6. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  7. Howlett, D. R., Perry, A. E., Godfrey, F., Swatton, J. E., Jennings, K. H., Spitzfaden, C., Wadsworth, H., Wood, S. J. & Markwell, R. E. (1999). Biochem. J 340, 283–289. [PMC free article] [PubMed]
  8. Reuss, S. H. von & König, W. A. (2004). Phytochemistry, 65, 3113–3118. [DOI] [PubMed]
  9. Sheldrick, G. M. (2000). SADABS University of Göttingen, Germany.
  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  11. Twyman, L. J. & Allsop, D. (1999). Tetrahedron Lett 40, 9383–9384.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033509/zl2233sup1.cif

e-65-o2269-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033509/zl2233Isup2.hkl

e-65-o2269-Isup2.hkl (156.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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