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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Sep 30;65(Pt 10):o2586. doi: 10.1107/S1600536809038781

(Z)-3-(3-Phenyl­allyl­idene)-1,5-dioxa­spiro­[5.5]undecane-2,4-dione

Wu-Lan Zeng a, Hua-Xiang Zhang a, Fang-Fang Jian b,*
PMCID: PMC2970375  PMID: 21578022

Abstract

In the title compound, C18H18O4, the 1,3-dioxane ring adopts a distorted envelope conformation with the C atom common to the cyclo­hexane ring forming the flap. In the crystal, inversion dimers linked by pairs of C—H⋯O hydrogen bonds occur.

Related literature

For background information on spiro-compounds, see: Jiang et al. (1998); Lian et al. (2008); Wei et al. (2008).graphic file with name e-65-o2586-scheme1.jpg

Experimental

Crystal data

  • C18H18O4

  • M r = 298.32

  • Triclinic, Inline graphic

  • a = 7.1177 (14) Å

  • b = 9.5506 (19) Å

  • c = 11.734 (2) Å

  • α = 106.82 (3)°

  • β = 100.14 (3)°

  • γ = 93.35 (3)°

  • V = 746.6 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 K

  • 0.22 × 0.18 × 0.10 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: none

  • 7448 measured reflections

  • 3401 independent reflections

  • 2309 reflections with I > 2σ(I)

  • R int = 0.016

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.130

  • S = 1.17

  • 3401 reflections

  • 199 parameters

  • H-atom parameters constrained

  • Δρmax = 0.30 e Å−3

  • Δρmin = −0.21 e Å−3

Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809038781/hb5108sup1.cif

e-65-o2586-sup1.cif (17.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809038781/hb5108Isup2.hkl

e-65-o2586-Isup2.hkl (166.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C10—H10A⋯O2i 0.97 2.52 3.440 (2) 158

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Spiro compounds are widely used in medicine, catalysis and optical materials (Lian et al., 2008; Jiang et al., 1998; Wei et al., 2008) owing to their interesting conformational features. We report here the synthesis and structure of the title compound, (I) (Fig. 1), as part of our ongoing studies on new spiro compounds with potentially higher bioactivity.

The 1,3-dioxane ring is in a distored envelope conformation with atom C11 atom common to the cyclohexane forming the flap. The crystal structure is stabilized by weak intermolecular C—H···O hydrogen bonds (Table 1).

Experimental

A mixture of malonic acid (6.24 g, 0.06 mol) and acetic anhydride(9 ml) in strong sulfuric acid (0.25 ml) was stirred with water at 303K, After dissolving, cyclohexanone (5.88 g, 0.06 mol) was added dropwise into solution for 1 h. The reaction was allowed to proceed for 4 h. The mixture was cooled and filtered, and then an ethanol solution of (Z)-3-phenylacrylaldehyde (7.92g, 0.06 mol) was added. The solution was then filtered and concentrated. Yellow blocks of (I) were obtained by evaporation of a petroleum ether–ethylacetate (3:1 v/v) solution at room temperature over a period of one week.

Refinement

The H atoms were placed in calculated positions (C—H = 0.93–0.97 Å), and refined as riding with Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), drawn with 30% probability ellipsoids and spheres of arbritrary size for the H atoms.

Crystal data

C18H18O4 Z = 2
Mr = 298.32 F(000) = 316
Triclinic, P1 Dx = 1.327 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.1177 (14) Å Cell parameters from 3401 reflections
b = 9.5506 (19) Å θ = 3.1–27.5°
c = 11.734 (2) Å µ = 0.09 mm1
α = 106.82 (3)° T = 293 K
β = 100.14 (3)° Block, yellow
γ = 93.35 (3)° 0.22 × 0.18 × 0.10 mm
V = 746.6 (3) Å3

Data collection

Bruker SMART CCD diffractometer 2309 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.016
graphite θmax = 27.5°, θmin = 3.1°
ω scans h = −8→9
7448 measured reflections k = −12→12
3401 independent reflections l = −15→15

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130 H-atom parameters constrained
S = 1.17 w = 1/[σ2(Fo2) + (0.0724P)2] where P = (Fo2 + 2Fc2)/3
3401 reflections (Δ/σ)max < 0.001
199 parameters Δρmax = 0.30 e Å3
0 restraints Δρmin = −0.21 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O4 0.07551 (13) 0.64682 (9) 0.13593 (9) 0.0440 (3)
O3 0.27862 (12) 0.86963 (9) 0.18966 (9) 0.0435 (3)
C18 −0.01600 (18) 0.86915 (14) 0.26210 (12) 0.0386 (3)
O2 −0.18747 (14) 0.63080 (11) 0.20875 (11) 0.0555 (3)
C17 −0.05451 (19) 0.70896 (14) 0.20042 (13) 0.0408 (3)
C11 0.19207 (18) 0.73899 (13) 0.09196 (12) 0.0375 (3)
C12 0.07076 (19) 0.77924 (15) −0.01133 (13) 0.0443 (3)
H12A −0.0251 0.8396 0.0195 0.053*
H12B 0.0042 0.6902 −0.0723 0.053*
C10 0.35558 (19) 0.65608 (14) 0.05319 (14) 0.0440 (3)
H10A 0.3043 0.5604 −0.0042 0.053*
H10B 0.4353 0.6405 0.1235 0.053*
C16 0.16915 (19) 0.94609 (15) 0.26336 (13) 0.0443 (3)
C4 −0.2995 (2) 1.28109 (15) 0.52506 (13) 0.0430 (3)
C14 −0.1418 (2) 1.08555 (15) 0.39392 (13) 0.0450 (3)
H14A −0.0315 1.1500 0.4069 0.054*
C15 −0.15033 (19) 0.93622 (15) 0.32054 (13) 0.0426 (3)
H15A −0.2635 0.8767 0.3116 0.051*
O1 0.23340 (15) 1.06908 (12) 0.32633 (13) 0.0728 (4)
C13 −0.2902 (2) 1.13463 (16) 0.44451 (13) 0.0453 (3)
H13A −0.3994 1.0674 0.4260 0.054*
C5 −0.4695 (2) 1.31394 (17) 0.56535 (14) 0.0511 (4)
H5A −0.5745 1.2418 0.5408 0.061*
C9 0.4779 (2) 0.74002 (16) −0.00542 (15) 0.0520 (4)
H9A 0.5422 0.8302 0.0551 0.062*
H9B 0.5757 0.6807 −0.0346 0.062*
C3 −0.1442 (2) 1.39115 (17) 0.56447 (14) 0.0505 (4)
H3A −0.0287 1.3716 0.5399 0.061*
C6 −0.4845 (2) 1.45175 (18) 0.64115 (15) 0.0576 (4)
H6A −0.5987 1.4717 0.6676 0.069*
C8 0.3571 (2) 0.77756 (18) −0.11085 (16) 0.0584 (4)
H8A 0.3042 0.6875 −0.1755 0.070*
H8B 0.4376 0.8363 −0.1426 0.070*
C2 −0.1606 (2) 1.52867 (18) 0.63955 (15) 0.0585 (4)
H2A −0.0563 1.6015 0.6649 0.070*
C7 0.1938 (2) 0.86284 (17) −0.06957 (15) 0.0551 (4)
H7A 0.2471 0.9577 −0.0115 0.066*
H7B 0.1140 0.8803 −0.1390 0.066*
C1 −0.3313 (3) 1.55903 (18) 0.67735 (15) 0.0590 (4)
H1A −0.3420 1.6523 0.7274 0.071*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O4 0.0515 (5) 0.0329 (5) 0.0487 (6) 0.0045 (4) 0.0164 (4) 0.0102 (4)
O3 0.0393 (5) 0.0384 (5) 0.0451 (6) 0.0004 (4) 0.0101 (4) 0.0006 (4)
C18 0.0396 (6) 0.0387 (7) 0.0341 (7) 0.0034 (5) 0.0056 (5) 0.0072 (6)
O2 0.0517 (6) 0.0479 (6) 0.0653 (8) −0.0055 (5) 0.0172 (5) 0.0136 (5)
C17 0.0412 (7) 0.0411 (7) 0.0386 (7) 0.0026 (6) 0.0063 (6) 0.0112 (6)
C11 0.0407 (6) 0.0300 (6) 0.0389 (7) 0.0024 (5) 0.0092 (5) 0.0059 (5)
C12 0.0454 (7) 0.0429 (7) 0.0438 (8) 0.0112 (6) 0.0078 (6) 0.0113 (6)
C10 0.0470 (7) 0.0359 (6) 0.0493 (8) 0.0123 (6) 0.0113 (6) 0.0110 (6)
C16 0.0415 (7) 0.0416 (7) 0.0428 (8) 0.0034 (6) 0.0089 (6) 0.0024 (6)
C4 0.0470 (7) 0.0489 (7) 0.0366 (7) 0.0114 (6) 0.0134 (6) 0.0144 (6)
C14 0.0458 (7) 0.0465 (7) 0.0407 (8) 0.0060 (6) 0.0115 (6) 0.0082 (6)
C15 0.0420 (7) 0.0462 (7) 0.0384 (7) 0.0034 (6) 0.0086 (6) 0.0112 (6)
O1 0.0542 (6) 0.0493 (6) 0.0873 (9) −0.0122 (5) 0.0238 (6) −0.0238 (6)
C13 0.0448 (7) 0.0481 (7) 0.0426 (8) 0.0063 (6) 0.0109 (6) 0.0118 (6)
C5 0.0522 (8) 0.0555 (8) 0.0493 (9) 0.0097 (7) 0.0199 (7) 0.0151 (7)
C9 0.0492 (8) 0.0500 (8) 0.0612 (10) 0.0158 (7) 0.0235 (7) 0.0145 (7)
C3 0.0492 (8) 0.0571 (9) 0.0440 (9) 0.0071 (7) 0.0147 (6) 0.0104 (7)
C6 0.0644 (10) 0.0632 (9) 0.0533 (10) 0.0229 (8) 0.0298 (8) 0.0165 (8)
C8 0.0696 (10) 0.0579 (9) 0.0577 (10) 0.0154 (8) 0.0298 (8) 0.0216 (8)
C2 0.0685 (10) 0.0551 (9) 0.0474 (9) 0.0000 (8) 0.0143 (8) 0.0086 (8)
C7 0.0685 (10) 0.0530 (8) 0.0541 (10) 0.0214 (7) 0.0191 (8) 0.0253 (8)
C1 0.0802 (11) 0.0530 (9) 0.0458 (9) 0.0170 (8) 0.0236 (8) 0.0099 (7)

Geometric parameters (Å, °)

O4—C17 1.3536 (17) C14—C15 1.428 (2)
O4—C11 1.4344 (16) C14—H14A 0.9300
O3—C16 1.3515 (17) C15—H15A 0.9300
O3—C11 1.4437 (16) C13—H13A 0.9300
C18—C15 1.3575 (19) C5—C6 1.381 (2)
C18—C16 1.4665 (19) C5—H5A 0.9300
C18—C17 1.4765 (19) C9—C8 1.522 (2)
O2—C17 1.2062 (17) C9—H9A 0.9700
C11—C10 1.5080 (18) C9—H9B 0.9700
C11—C12 1.5174 (18) C3—C2 1.378 (2)
C12—C7 1.522 (2) C3—H3A 0.9300
C12—H12A 0.9700 C6—C1 1.369 (2)
C12—H12B 0.9700 C6—H6A 0.9300
C10—C9 1.524 (2) C8—C7 1.526 (2)
C10—H10A 0.9700 C8—H8A 0.9700
C10—H10B 0.9700 C8—H8B 0.9700
C16—O1 1.2045 (17) C2—C1 1.384 (2)
C4—C3 1.394 (2) C2—H2A 0.9300
C4—C5 1.395 (2) C7—H7A 0.9700
C4—C13 1.457 (2) C7—H7B 0.9700
C14—C13 1.344 (2) C1—H1A 0.9300
C17—O4—C11 118.14 (10) C14—C15—H15A 115.5
C16—O3—C11 119.54 (10) C14—C13—C4 127.39 (14)
C15—C18—C16 123.28 (12) C14—C13—H13A 116.3
C15—C18—C17 117.99 (12) C4—C13—H13A 116.3
C16—C18—C17 118.63 (12) C6—C5—C4 121.11 (15)
O2—C17—O4 118.86 (12) C6—C5—H5A 119.4
O2—C17—C18 124.36 (14) C4—C5—H5A 119.4
O4—C17—C18 116.68 (12) C8—C9—C10 111.66 (12)
O4—C11—O3 110.01 (11) C8—C9—H9A 109.3
O4—C11—C10 107.54 (10) C10—C9—H9A 109.3
O3—C11—C10 106.20 (10) C8—C9—H9B 109.3
O4—C11—C12 109.82 (10) C10—C9—H9B 109.3
O3—C11—C12 110.77 (10) H9A—C9—H9B 107.9
C10—C11—C12 112.40 (12) C2—C3—C4 120.55 (15)
C11—C12—C7 111.29 (12) C2—C3—H3A 119.7
C11—C12—H12A 109.4 C4—C3—H3A 119.7
C7—C12—H12A 109.4 C1—C6—C5 119.95 (15)
C11—C12—H12B 109.4 C1—C6—H6A 120.0
C7—C12—H12B 109.4 C5—C6—H6A 120.0
H12A—C12—H12B 108.0 C9—C8—C7 110.64 (13)
C11—C10—C9 111.33 (10) C9—C8—H8A 109.5
C11—C10—H10A 109.4 C7—C8—H8A 109.5
C9—C10—H10A 109.4 C9—C8—H8B 109.5
C11—C10—H10B 109.4 C7—C8—H8B 109.5
C9—C10—H10B 109.4 H8A—C8—H8B 108.1
H10A—C10—H10B 108.0 C3—C2—C1 120.34 (16)
O1—C16—O3 117.67 (13) C3—C2—H2A 119.8
O1—C16—C18 125.75 (14) C1—C2—H2A 119.8
O3—C16—C18 116.55 (12) C12—C7—C8 111.50 (12)
C3—C4—C5 118.04 (14) C12—C7—H7A 109.3
C3—C4—C13 122.64 (13) C8—C7—H7A 109.3
C5—C4—C13 119.32 (14) C12—C7—H7B 109.3
C13—C14—C15 121.18 (14) C8—C7—H7B 109.3
C13—C14—H14A 119.4 H7A—C7—H7B 108.0
C15—C14—H14A 119.4 C6—C1—C2 120.00 (16)
C18—C15—C14 128.93 (13) C6—C1—H1A 120.0
C18—C15—H15A 115.5 C2—C1—H1A 120.0

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C10—H10A···O2i 0.97 2.52 3.440 (2) 158

Symmetry codes: (i) −x, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5108).

References

  1. Bruker (1997). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Jiang, Y. Z., Xue, S., Li, Z., Deng, J. G., Mi, A. Q. & Albert, S. C. C. (1998). Tetrahedron, 9, 3185–3189.
  3. Lian, Y., Guo, J. J., Liu, X. M. & Wei, R. B. (2008). Chem. Res. Chin. Univ.24, 441–444.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Wei, R. B., Liu, B., Liu, Y., Guo, J. J. & Zhang, D. W. (2008). Chin. J. Or. C 28, 1501–1514.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809038781/hb5108sup1.cif

e-65-o2586-sup1.cif (17.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809038781/hb5108Isup2.hkl

e-65-o2586-Isup2.hkl (166.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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