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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Sep 5;65(Pt 10):o2318. doi: 10.1107/S1600536809033911

7-Chloro-5-(2-ethoxy­phen­yl)-1-methyl-3-propyl-2,6-dihydro-1H-pyrazolo[4,3-d]pyrimidine

Ming-Qiu Zhou a, Kai Zhu a, Xiao-Ping Lv a, Ping-Fang Han a,*, Ping Wei a
PMCID: PMC2970445  PMID: 21577789

Abstract

In the title compound, C17H21ClN4O, the benzene ring is oriented at dihedral angles of 1.59 (3) and 1.27 (3)° with respect to the pyrimidine and pyrazole rings, while the dihedral angle between the pyrimidine and pyrazole rings is 0.83 (3)°. An intra­molecular N—H⋯O hydrogen bond results in the formation of a planar (r.m.s. deviation 0.004 Å) six-membered ring.

Related literature

For a related structure, see: Rajesh & Joshi (2007). For bond-length data, see: Allen et al. (1987).graphic file with name e-65-o2318-scheme1.jpg

Experimental

Crystal data

  • C17H21ClN4O

  • M r = 332.83

  • Triclinic, Inline graphic

  • a = 4.6700 (9) Å

  • b = 11.647 (2) Å

  • c = 16.064 (3) Å

  • α = 78.56 (3)°

  • β = 86.75 (3)°

  • γ = 79.81 (3)°

  • V = 842.7 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.24 mm−1

  • T = 294 K

  • 0.30 × 0.10 × 0.10 mm

Data collection

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: ψ scan (North et al., 1968) T min = 0.932, T max = 0.977

  • 3470 measured reflections

  • 3061 independent reflections

  • 2353 reflections with I > 2σ(I)

  • R int = 0.033

  • 3 standard reflections frequency: 120 min intensity decay: 1%

Refinement

  • R[F 2 > 2σ(F 2)] = 0.064

  • wR(F 2) = 0.182

  • S = 1.00

  • 3061 reflections

  • 208 parameters

  • H-atom parameters constrained

  • Δρmax = 0.38 e Å−3

  • Δρmin = −0.52 e Å−3

Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 and PLATON.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033911/hk2761sup1.cif

e-65-o2318-sup1.cif (20.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033911/hk2761Isup2.hkl

e-65-o2318-Isup2.hkl (150.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O1 0.86 1.91 2.616 (3) 138

Acknowledgments

The authors thank the Innovation Fund for Doctoral Theses (BSCX200811) and Nanjing University of Technology for support.

supplementary crystallographic information

Comment

Some derivatives of 5-(2-ethoxyphenyl)-1-methyl-3-propyl-1,6-dihydro-7H -pyrazolo[4,3-d]pyrimidin-7-one are important chemical materials. We report herein the crystal structure of the title compound.

In the molecule of the title compound, (Fig. 1), the bond lengths (Allen et al., 1987) and angles are within normal ranges. Rings A (C3-C8), B (N1/N2/C9-C12) and C (N3/N4/C10/C11/C13) are, of course, planar. The dihedral angles between them are A/B = 1.59 (3), A/C = 1.27 (3) and B/C = 0.83 (3) °. The intramolecular N-H···O hydrogen bond (Table 1) results in the formation of a planar six-membered ring D (O1/N1/C3/C8/C9/H1A), which is oriented with respect to the other rings at dihedral angles of A/D = 1.01 (3), B/D = 0.63 (3) and C/D = 0.83 (3) °. So, the rings are almost coplanar.

Experimental

For the preparation of the title compound, 5-(2-ethoxyphenyl)-1-methyl-3-propyl -1,6-dihydro-7H-pyrazolo[4,3-d]pyrimidin-7-one (15.6 g) and phosphorus trichloride (13.7 g) were added into carbon tetrachloride (100 ml) at 345-350 K. The gross products were extracted with n-hexane, dried under vaccum, and then recrystallized in dichloromethane. Finally the title compound is obtained (yield; 1.5 g) (Rajesh et al., 2007). Crystals suitable for X-ray analysis were obtained by slow evaporation of a methanol solution.

Refinement

H atoms were positioned geometrically with N-H = 0.86 Å (for NH) and C-H = 0.93, 0.97 and 0.96 Å for aromatic, methylene and methyl H atoms, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title molecule, with the atom-numbering scheme. Hydrogen bond is shown as dashed line.

Crystal data

C17H21ClN4O Z = 2
Mr = 332.83 F(000) = 352
Triclinic, P1 Dx = 1.312 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 4.6700 (9) Å Cell parameters from 25 reflections
b = 11.647 (2) Å θ = 9–13°
c = 16.064 (3) Å µ = 0.24 mm1
α = 78.56 (3)° T = 294 K
β = 86.75 (3)° BlocK, yellow
γ = 79.81 (3)° 0.30 × 0.10 × 0.10 mm
V = 842.7 (3) Å3

Data collection

Enraf–Nonius CAD-4 diffractometer 2353 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.033
graphite θmax = 25.3°, θmin = 1.3°
ω/2θ scans h = 0→5
Absorption correction: ψ scan (North et al., 1968) k = −13→13
Tmin = 0.932, Tmax = 0.977 l = −19→19
3470 measured reflections 3 standard reflections every 120 min
3061 independent reflections intensity decay: 1%

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.182 H-atom parameters constrained
S = 1.00 w = 1/[σ2(Fo2) + (0.1P)2 + 0.6P] where P = (Fo2 + 2Fc2)/3
3061 reflections (Δ/σ)max = 0.001
208 parameters Δρmax = 0.38 e Å3
0 restraints Δρmin = −0.52 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl 0.45734 (19) 0.18716 (7) 0.56202 (5) 0.0581 (3)
O1 0.4864 (5) 0.49028 (18) 0.68108 (14) 0.0528 (6)
N1 0.6871 (5) 0.2658 (2) 0.68131 (14) 0.0420 (6)
H1A 0.5753 0.3313 0.6613 0.050*
N2 1.0314 (5) 0.1732 (2) 0.78486 (14) 0.0414 (6)
N3 1.1345 (6) −0.1091 (2) 0.72458 (16) 0.0506 (7)
H3A 1.2075 −0.1828 0.7269 0.061*
N4 0.9354 (6) −0.0435 (2) 0.66884 (16) 0.0466 (6)
C1 0.1508 (7) 0.5709 (3) 0.5722 (2) 0.0605 (9)
H1B 0.0284 0.6416 0.5443 0.091*
H1C 0.0335 0.5119 0.5956 0.091*
H1D 0.2893 0.5410 0.5319 0.091*
C2 0.3079 (7) 0.5992 (3) 0.6417 (2) 0.0550 (8)
H2B 0.4278 0.6587 0.6189 0.066*
H2C 0.1703 0.6297 0.6829 0.066*
C3 0.6554 (7) 0.4882 (3) 0.74759 (19) 0.0452 (7)
C4 0.6545 (8) 0.5877 (3) 0.7839 (2) 0.0597 (9)
H4A 0.5325 0.6587 0.7632 0.072*
C5 0.8344 (9) 0.5806 (3) 0.8503 (2) 0.0671 (10)
H5A 0.8325 0.6470 0.8744 0.081*
C6 1.0161 (9) 0.4770 (3) 0.8812 (2) 0.0635 (9)
H6A 1.1384 0.4735 0.9257 0.076*
C7 1.0177 (7) 0.3782 (3) 0.8465 (2) 0.0528 (8)
H7A 1.1418 0.3082 0.8683 0.063*
C8 0.8384 (6) 0.3800 (3) 0.77958 (18) 0.0428 (7)
C9 0.8566 (6) 0.2674 (2) 0.74811 (17) 0.0393 (6)
C10 1.0325 (6) 0.0743 (2) 0.75138 (17) 0.0397 (6)
C11 0.8671 (6) 0.0690 (2) 0.68347 (17) 0.0398 (6)
C12 0.6759 (6) 0.1717 (2) 0.64296 (17) 0.0389 (6)
C13 1.1973 (6) −0.0409 (3) 0.77464 (19) 0.0443 (7)
C14 0.8296 (8) −0.0978 (3) 0.6049 (2) 0.0606 (9)
H14A 0.9214 −0.1795 0.6116 0.091*
H14B 0.8752 −0.0562 0.5493 0.091*
H14C 0.6226 −0.0934 0.6116 0.091*
C15 1.3994 (7) −0.0863 (3) 0.84708 (19) 0.0502 (8)
H15A 1.4993 −0.0232 0.8551 0.060*
H15B 1.5449 −0.1506 0.8332 0.060*
C16 1.2456 (9) −0.1304 (5) 0.9283 (2) 0.0868 (14)
H16A 1.0974 −0.0661 0.9409 0.104*
H16B 1.1471 −0.1936 0.9197 0.104*
C17 1.4345 (10) −0.1757 (5) 1.0040 (2) 0.0865 (13)
H17A 1.3173 −0.2021 1.0527 0.130*
H17B 1.5283 −0.1132 1.0147 0.130*
H17C 1.5793 −0.2410 0.9932 0.130*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl 0.0624 (5) 0.0586 (5) 0.0533 (5) −0.0064 (4) −0.0254 (4) −0.0076 (4)
O1 0.0595 (13) 0.0387 (11) 0.0578 (13) 0.0041 (10) −0.0213 (11) −0.0087 (9)
N1 0.0438 (13) 0.0384 (13) 0.0421 (13) −0.0020 (10) −0.0136 (11) −0.0050 (10)
N2 0.0417 (13) 0.0432 (13) 0.0385 (12) −0.0065 (10) −0.0090 (10) −0.0040 (10)
N3 0.0554 (16) 0.0390 (13) 0.0539 (15) 0.0040 (12) −0.0135 (12) −0.0079 (11)
N4 0.0530 (15) 0.0395 (13) 0.0472 (14) −0.0013 (11) −0.0119 (12) −0.0106 (11)
C1 0.0518 (19) 0.061 (2) 0.063 (2) 0.0071 (16) −0.0128 (16) −0.0078 (17)
C2 0.0521 (19) 0.0433 (17) 0.063 (2) 0.0070 (14) −0.0095 (16) −0.0055 (15)
C3 0.0453 (16) 0.0440 (16) 0.0469 (17) −0.0074 (13) −0.0020 (13) −0.0102 (13)
C4 0.065 (2) 0.0452 (18) 0.070 (2) −0.0044 (16) −0.0089 (18) −0.0163 (16)
C5 0.081 (3) 0.057 (2) 0.072 (2) −0.0113 (19) −0.012 (2) −0.0298 (18)
C6 0.074 (2) 0.065 (2) 0.057 (2) −0.0163 (19) −0.0199 (18) −0.0194 (17)
C7 0.0583 (19) 0.0499 (18) 0.0516 (18) −0.0076 (15) −0.0168 (15) −0.0102 (14)
C8 0.0430 (16) 0.0428 (16) 0.0432 (15) −0.0088 (13) −0.0052 (13) −0.0068 (12)
C9 0.0376 (14) 0.0407 (15) 0.0383 (14) −0.0069 (12) −0.0037 (12) −0.0037 (12)
C10 0.0399 (15) 0.0404 (15) 0.0374 (14) −0.0049 (12) −0.0043 (12) −0.0044 (12)
C11 0.0409 (15) 0.0400 (15) 0.0379 (14) −0.0066 (12) −0.0045 (12) −0.0048 (12)
C12 0.0376 (14) 0.0413 (15) 0.0377 (14) −0.0097 (12) −0.0031 (12) −0.0040 (12)
C13 0.0419 (16) 0.0431 (16) 0.0441 (16) −0.0004 (12) −0.0055 (13) −0.0042 (13)
C14 0.074 (2) 0.0503 (19) 0.061 (2) −0.0034 (17) −0.0181 (18) −0.0203 (16)
C15 0.0476 (17) 0.0463 (17) 0.0524 (18) 0.0036 (13) −0.0128 (14) −0.0060 (14)
C16 0.060 (2) 0.135 (4) 0.057 (2) −0.028 (2) −0.0162 (19) 0.014 (2)
C17 0.081 (3) 0.117 (4) 0.055 (2) −0.024 (3) −0.015 (2) 0.010 (2)

Geometric parameters (Å, °)

Cl—C12 1.660 (3) C5—C6 1.367 (5)
O1—C2 1.439 (4) C5—H5A 0.9300
O1—C3 1.358 (4) C6—C7 1.373 (5)
N1—C9 1.374 (3) C6—H6A 0.9300
N1—C12 1.369 (4) C7—C8 1.395 (4)
N1—H1A 0.8600 C7—H7A 0.9300
N2—C9 1.304 (4) C8—C9 1.484 (4)
N2—C10 1.363 (4) C10—C11 1.389 (4)
N3—N4 1.350 (3) C10—C13 1.414 (4)
N3—C13 1.315 (4) C11—C12 1.425 (4)
N3—H3A 0.8600 C13—C15 1.493 (4)
N4—C11 1.356 (4) C14—H14A 0.9600
N4—C14 1.458 (4) C14—H14B 0.9600
C1—C2 1.489 (5) C14—H14C 0.9600
C1—H1B 0.9600 C15—C16 1.497 (5)
C1—H1C 0.9600 C15—H15A 0.9700
C1—H1D 0.9600 C15—H15B 0.9700
C2—H2B 0.9700 C16—C17 1.496 (5)
C2—H2C 0.9700 C16—H16A 0.9700
C3—C4 1.396 (4) C16—H16B 0.9700
C3—C8 1.412 (4) C17—H17A 0.9600
C4—C5 1.375 (5) C17—H17B 0.9600
C4—H4A 0.9300 C17—H17C 0.9600
C3—O1—C2 120.4 (2) C3—C8—C9 125.6 (3)
C12—N1—C9 127.4 (2) N2—C9—N1 122.1 (3)
C12—N1—H1A 116.3 N2—C9—C8 119.1 (3)
C9—N1—H1A 116.3 N1—C9—C8 118.8 (2)
C9—N2—C10 114.6 (2) N2—C10—C11 125.1 (3)
C13—N3—N4 108.1 (2) N2—C10—C13 129.4 (3)
C13—N3—H3A 125.9 C11—C10—C13 105.4 (3)
N4—N3—H3A 125.9 N4—C11—C10 106.8 (2)
N3—N4—C11 110.3 (2) N4—C11—C12 132.7 (3)
N3—N4—C14 119.5 (2) C10—C11—C12 120.5 (3)
C11—N4—C14 130.2 (3) N1—C12—C11 110.1 (2)
C2—C1—H1B 109.5 N1—C12—Cl 120.5 (2)
C2—C1—H1C 109.5 C11—C12—Cl 129.4 (2)
H1B—C1—H1C 109.5 N3—C13—C10 109.3 (3)
C2—C1—H1D 109.5 N3—C13—C15 122.6 (3)
H1B—C1—H1D 109.5 C10—C13—C15 127.9 (3)
H1C—C1—H1D 109.5 N4—C14—H14A 109.5
O1—C2—C1 106.9 (3) N4—C14—H14B 109.5
O1—C2—H2B 110.3 H14A—C14—H14B 109.5
C1—C2—H2B 110.3 N4—C14—H14C 109.5
O1—C2—H2C 110.3 H14A—C14—H14C 109.5
C1—C2—H2C 110.3 H14B—C14—H14C 109.5
H2B—C2—H2C 108.6 C13—C15—C16 112.7 (3)
O1—C3—C4 122.6 (3) C13—C15—H15A 109.1
O1—C3—C8 117.3 (3) C16—C15—H15A 109.1
C4—C3—C8 120.1 (3) C13—C15—H15B 109.1
C5—C4—C3 119.9 (3) C16—C15—H15B 109.1
C5—C4—H4A 120.0 H15A—C15—H15B 107.8
C3—C4—H4A 120.0 C17—C16—C15 115.6 (3)
C6—C5—C4 120.8 (3) C17—C16—H16A 108.4
C6—C5—H5A 119.6 C15—C16—H16A 108.4
C4—C5—H5A 119.6 C17—C16—H16B 108.4
C5—C6—C7 119.9 (3) C15—C16—H16B 108.4
C5—C6—H6A 120.1 H16A—C16—H16B 107.5
C7—C6—H6A 120.1 C16—C17—H17A 109.5
C6—C7—C8 121.8 (3) C16—C17—H17B 109.5
C6—C7—H7A 119.1 H17A—C17—H17B 109.5
C8—C7—H7A 119.1 C16—C17—H17C 109.5
C7—C8—C3 117.5 (3) H17A—C17—H17C 109.5
C7—C8—C9 116.9 (3) H17B—C17—H17C 109.5
C3—O1—C2—C1 −179.6 (3) C6—C7—C8—C9 −179.3 (3)
C2—O1—C3—C4 3.4 (5) O1—C3—C8—C7 178.4 (3)
C2—O1—C3—C8 −176.2 (3) C4—C3—C8—C7 −1.2 (5)
C12—N1—C9—N2 −1.2 (5) O1—C3—C8—C9 −1.6 (5)
C12—N1—C9—C8 179.2 (3) C4—C3—C8—C9 178.8 (3)
C9—N1—C12—C11 1.1 (4) C7—C8—C9—N2 1.4 (4)
C9—N1—C12—Cl −179.6 (2) C3—C8—C9—N2 −178.6 (3)
C10—N2—C9—N1 0.4 (4) C7—C8—C9—N1 −179.0 (3)
C10—N2—C9—C8 180.0 (2) C3—C8—C9—N1 1.1 (4)
C9—N2—C10—C11 0.3 (4) N2—C10—C11—N4 178.7 (3)
C9—N2—C10—C13 178.9 (3) C13—C10—C11—N4 −0.2 (3)
C13—N3—N4—C11 −0.4 (3) N2—C10—C11—C12 −0.3 (4)
C13—N3—N4—C14 179.3 (3) C13—C10—C11—C12 −179.1 (3)
N4—N3—C13—C10 0.2 (3) N4—C11—C12—N1 −179.1 (3)
N4—N3—C13—C15 176.7 (3) C10—C11—C12—N1 −0.4 (4)
N3—N4—C11—C10 0.3 (3) N4—C11—C12—Cl 1.7 (5)
C14—N4—C11—C10 −179.3 (3) C10—C11—C12—Cl −179.6 (2)
N3—N4—C11—C12 179.1 (3) N2—C10—C13—N3 −178.9 (3)
C14—N4—C11—C12 −0.5 (6) C11—C10—C13—N3 −0.1 (3)
O1—C3—C4—C5 −178.9 (3) N2—C10—C13—C15 4.9 (5)
C8—C3—C4—C5 0.7 (5) C11—C10—C13—C15 −176.3 (3)
C3—C4—C5—C6 0.3 (6) N3—C13—C15—C16 −90.3 (4)
C4—C5—C6—C7 −0.7 (6) C10—C13—C15—C16 85.5 (4)
C5—C6—C7—C8 0.2 (6) C13—C15—C16—C17 −179.2 (4)
C6—C7—C8—C3 0.7 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O1 0.86 1.91 2.616 (3) 138

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HK2761).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Enraf–Nonius (1989). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
  3. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  4. Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
  5. North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
  6. Rajesh, K. & Joshi, Y. C. (2007). Arkivoc, pp. 142–149.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033911/hk2761sup1.cif

e-65-o2318-sup1.cif (20.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033911/hk2761Isup2.hkl

e-65-o2318-Isup2.hkl (150.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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