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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Oct 31;65(Pt 11):o2912. doi: 10.1107/S1600536809044146

Naphthalene-1,4,5,8-tetra­carboxylic acid 1,8-anhydride–4,4′-bipyridine (1/1)

Ji-Hua Deng a,*, Meng-Ping Guo b, Qiao-Chu Zhang a, Lin Yuan a, Hui-Rui Guo b, Guang-Quan Mei a
PMCID: PMC2970960  PMID: 21578491

Abstract

The title compound, C14H6O7·C10H8N2, has been hydro­thermally synthesized. Structural ananlysis indicates that the crystals are produced by cocrystallization of naphthalene-1,4,5,8-tetra­carboxylic acid 1,8-anhydride and 4,4′-bipyridine (bpy) mol­ecules. The crystal packing is stabilized by inter­molecular O—H⋯N and C—H⋯O hydrogen bonds and π–π stacking inter­actions [centroid–centroid distances = 3.5846 (9) Å].

Related literature

For the structures of naphthalene-1,4,5,8-tetra­carboxylic acid 1,8-anhydride, its DMSO solvate and several metal complexes, see: Blackburn et al. (1997); Fitzgerald et al. (1992); Robl (1987); Xu et al. (2005a ,b .) For hydrogen bonds, see: Desiraju & Steiner (1999).graphic file with name e-65-o2912-scheme1.jpg

Experimental

Crystal data

  • C14H6O7·C10H8N2

  • M r = 442.37

  • Triclinic, Inline graphic

  • a = 9.6193 (8) Å

  • b = 9.6964 (3) Å

  • c = 10.192 (1) Å

  • α = 81.384 (5)°

  • β = 85.615 (6)°

  • γ = 83.947 (3)°

  • V = 932.9 (1) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.12 mm−1

  • T = 173 K

  • 0.28 × 0.24 × 0.20 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 1998) T min = 0.968, T max = 0.977

  • 6648 measured reflections

  • 3240 independent reflections

  • 2772 reflections with I > 2σ(I)

  • R int = 0.017

Refinement

  • R[F 2 > 2σ(F 2)] = 0.033

  • wR(F 2) = 0.104

  • S = 1.06

  • 3240 reflections

  • 300 parameters

  • H-atom parameters constrained

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.21 e Å−3

Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809044146/im2151sup1.cif

e-65-o2912-sup1.cif (19.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044146/im2151Isup2.hkl

e-65-o2912-Isup2.hkl (158.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯N2i 0.84 1.77 2.594 (2) 167
O4—H4A⋯N1ii 0.84 1.74 2.573 (2) 171
C16—H16⋯O1iii 0.95 2.36 3.254 (2) 157
C22—H22⋯O3iv 0.95 2.57 3.425 (2) 150

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The authors thank the Youth Foundation of Jiangxi Provincial Office of Education (GJJ09605, GJJ09355) and the Natural Science Foundation of Jiangxi Province (2008GZH0063) for financial support.

supplementary crystallographic information

Comment

Several crystal structures of naphthalene-1,4,5,8-tetracarboxylic acid 1,8-anhydride (ntaa) (Xu et al., 2005b), its DMSO solvate (Blackburn et al., 1997) and some metal complexes (Fitzgerald et al., 1992; Robl et al., 1987; Xu et al., 2005a) have been reported in the literature. Herein, we report the synthesis and crystal crystal structure of a new compound of ntaa.

The structure of the title compound, (I), consists of one ntaa molecule and one bpy molecule. The two carboxylate groups of the ntaa are not coplanar with the naphthalene ring. The corresponding dihedral angles O1-C1-C2-C13 and O3-C12-C11-C10 are 50.8 (2)° and 52.7 (2)°, respectively. The two pyridyl rings of the bpy molecule are almost coplanar with a dihedral angle of 3.6 (3)° (Fig. 1).

The molecules are held together by intermolecular hydrogen bonding interactions (Desiraju et al. 1999) and π-π stacking interactions, forming a three-dimensional supramolecular network. Two O–H···N hydrogen bonds with O···O distances of 2.594 (2) and 2.573 (2) Å are formed with the two carboxylic acid OH groups as donors and the N atoms of the two inequivalent bpy molecules as acceptors (Table 1, Fig. 1 and Fig. 2). In addition, π-π stacking interactions between two pyridyl rings (3.346 Å) and two naphthalene rings (3.357 Å), are also observed.

Experimental

A mixture of 0.5 mmol NiCl2 × 6 H2O, 0.5 mmol of naphthalene-1,4,5,8-tetracarboxylic acid, 0.5 mmol of 4,4-bipyridine, 1.0 mmol of NaOH and 10 ml distilled water was heated to 383 K for six days in a 20 ml sealed Teflon-lined stainless steel vessel. After the autoclave was cooled to room temperature, block-shaped yellow crystals of (I) were isolated by filtration, washed with water, and dried in air. (yield: 53.2% based on naphthalene-1,4,5,8-tetracarboxylic acid)

Refinement

Hydrogen atoms attached to carbon and oxygen atoms were positioned geometrically and treated as riding, with C—H = 0.95 Å, O—H = 0.84 Å, and Uiso(H) = 1.2Ueq(C), Uiso(H) = 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The crystal structure of (I), Symmetry code: -x + 1, -y + 1, -z + 1.

Fig. 2.

Fig. 2.

The intermolecular hydrogen bonds (dashed lines) and π-π stacking interactions existing in the crystal structure of (I).

Crystal data

C14H6O7·C10H8N2 Z = 2
Mr = 442.37 F(000) = 456
Triclinic, P1 Dx = 1.575 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 9.6193 (8) Å Cell parameters from 5003 reflections
b = 9.6964 (3) Å θ = 2.9–27.1°
c = 10.192 (1) Å µ = 0.12 mm1
α = 81.384 (5)° T = 173 K
β = 85.615 (6)° Block, yellow
γ = 83.947 (3)° 0.28 × 0.24 × 0.20 mm
V = 932.9 (1) Å3

Data collection

Bruker SMART CCD area-detector diffractometer 3240 independent reflections
Radiation source: fine-focus sealed tube 2772 reflections with I > 2σ(I)
graphite Rint = 0.017
φ and ω scans θmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 1998\bbr00) h = −11→11
Tmin = 0.968, Tmax = 0.977 k = −11→11
6648 measured reflections l = −12→12

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104 H-atom parameters constrained
S = 1.06 w = 1/[σ2(Fo2) + (0.0664P)2 + 0.1626P] where P = (Fo2 + 2Fc2)/3
3240 reflections (Δ/σ)max < 0.001
300 parameters Δρmax = 0.21 e Å3
0 restraints Δρmin = −0.21 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O6 1.12369 (10) 0.85984 (10) 0.57565 (9) 0.0273 (2)
O3 0.55296 (10) 0.61928 (11) 0.24288 (10) 0.0327 (3)
O7 0.92667 (10) 0.94482 (10) 0.67238 (10) 0.0299 (3)
O1 0.83856 (10) 0.51984 (10) 0.08988 (9) 0.0296 (2)
O5 1.31804 (10) 0.81386 (10) 0.45444 (10) 0.0304 (3)
C8 0.90124 (14) 0.79831 (13) 0.50961 (13) 0.0228 (3)
C14 0.97444 (13) 0.70939 (13) 0.42367 (13) 0.0207 (3)
C13 0.89868 (13) 0.63253 (13) 0.34836 (12) 0.0207 (3)
C11 0.74906 (14) 0.65192 (13) 0.36207 (13) 0.0226 (3)
C2 0.98025 (14) 0.54118 (13) 0.26762 (13) 0.0219 (3)
C5 1.12245 (14) 0.69889 (13) 0.41277 (13) 0.0230 (3)
C10 0.68213 (14) 0.74534 (14) 0.44146 (14) 0.0262 (3)
H10 0.5828 0.7608 0.4452 0.031*
C7 0.97886 (14) 0.87102 (13) 0.59342 (13) 0.0243 (3)
C6 1.19789 (14) 0.79167 (14) 0.47810 (13) 0.0246 (3)
C12 0.65343 (14) 0.56573 (14) 0.30445 (13) 0.0241 (3)
C4 1.19675 (14) 0.60634 (14) 0.33777 (14) 0.0261 (3)
H4 1.2962 0.5972 0.3331 0.031*
C1 0.91902 (14) 0.46243 (14) 0.17226 (13) 0.0229 (3)
C9 0.75773 (15) 0.81770 (14) 0.51654 (14) 0.0265 (3)
H9 0.7098 0.8800 0.5721 0.032*
C3 1.12416 (14) 0.52589 (14) 0.26854 (14) 0.0257 (3)
H3 1.1757 0.4585 0.2205 0.031*
N1 0.46466 (12) 0.72761 (13) 0.75937 (12) 0.0280 (3)
N2 0.84743 (12) 1.16076 (13) 1.06975 (12) 0.0298 (3)
C17 0.62220 (13) 0.89707 (14) 0.87676 (13) 0.0228 (3)
C18 0.70313 (13) 0.98835 (14) 0.94187 (13) 0.0227 (3)
C23 0.52433 (15) 0.95430 (15) 0.78427 (14) 0.0272 (3)
H23 0.5101 1.0529 0.7596 0.033*
C22 0.68533 (16) 1.13357 (15) 0.91138 (14) 0.0305 (3)
H22 0.6234 1.1769 0.8457 0.037*
C15 0.55791 (15) 0.67228 (15) 0.84780 (15) 0.0310 (3)
H15 0.5694 0.5733 0.8706 0.037*
C24 0.44849 (15) 0.86730 (15) 0.72895 (14) 0.0297 (3)
H24 0.3820 0.9081 0.6667 0.036*
C16 0.63843 (15) 0.75167 (15) 0.90771 (15) 0.0302 (3)
H16 0.7043 0.7076 0.9694 0.036*
C21 0.75874 (16) 1.21431 (15) 0.97767 (14) 0.0310 (3)
H21 0.7449 1.3133 0.9561 0.037*
C20 0.86494 (16) 1.02078 (16) 1.10009 (16) 0.0362 (4)
H20 0.9275 0.9808 1.1663 0.043*
C19 0.79578 (16) 0.93242 (16) 1.03902 (15) 0.0331 (3)
H19 0.8113 0.8338 1.0632 0.040*
O4 0.68631 (10) 0.43151 (10) 0.33780 (10) 0.0283 (2)
H4A 0.6303 0.3865 0.3059 0.042*
O2 0.96983 (10) 0.33081 (10) 0.18631 (10) 0.0280 (2)
H2 0.9261 0.2867 0.1405 0.042*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O6 0.0303 (5) 0.0273 (5) 0.0267 (5) −0.0074 (4) −0.0067 (4) −0.0057 (4)
O3 0.0249 (5) 0.0356 (6) 0.0398 (6) 0.0001 (4) −0.0124 (4) −0.0093 (5)
O7 0.0389 (6) 0.0248 (5) 0.0279 (5) 0.0009 (4) −0.0085 (4) −0.0093 (4)
O1 0.0328 (6) 0.0302 (5) 0.0268 (5) −0.0008 (4) −0.0087 (4) −0.0050 (4)
O5 0.0256 (5) 0.0315 (5) 0.0358 (6) −0.0100 (4) −0.0071 (4) −0.0028 (4)
C8 0.0273 (7) 0.0182 (6) 0.0232 (7) −0.0038 (5) −0.0032 (5) −0.0020 (5)
C14 0.0237 (7) 0.0173 (6) 0.0213 (6) −0.0036 (5) −0.0038 (5) −0.0005 (5)
C13 0.0232 (7) 0.0184 (6) 0.0206 (6) −0.0039 (5) −0.0043 (5) −0.0003 (5)
C11 0.0235 (7) 0.0208 (6) 0.0234 (7) −0.0028 (5) −0.0041 (5) −0.0012 (5)
C2 0.0247 (7) 0.0195 (6) 0.0217 (6) −0.0043 (5) −0.0027 (5) −0.0010 (5)
C5 0.0247 (7) 0.0208 (6) 0.0236 (7) −0.0050 (5) −0.0050 (5) 0.0002 (5)
C10 0.0207 (7) 0.0262 (7) 0.0320 (8) −0.0013 (5) −0.0025 (6) −0.0056 (6)
C7 0.0289 (7) 0.0194 (6) 0.0246 (7) −0.0027 (5) −0.0064 (6) −0.0007 (5)
C6 0.0274 (8) 0.0217 (6) 0.0243 (7) −0.0038 (5) −0.0068 (6) 0.0013 (5)
C12 0.0203 (7) 0.0285 (7) 0.0244 (7) −0.0039 (5) −0.0010 (5) −0.0054 (6)
C4 0.0191 (7) 0.0277 (7) 0.0318 (7) −0.0039 (5) −0.0024 (6) −0.0036 (6)
C1 0.0230 (7) 0.0239 (7) 0.0224 (7) −0.0045 (5) 0.0001 (5) −0.0042 (5)
C9 0.0279 (7) 0.0239 (7) 0.0282 (7) 0.0002 (5) −0.0007 (6) −0.0076 (6)
C3 0.0239 (7) 0.0252 (7) 0.0286 (7) −0.0013 (5) −0.0001 (6) −0.0071 (6)
N1 0.0241 (6) 0.0320 (7) 0.0308 (6) −0.0072 (5) −0.0007 (5) −0.0112 (5)
N2 0.0283 (6) 0.0332 (7) 0.0314 (7) −0.0050 (5) −0.0024 (5) −0.0141 (5)
C17 0.0203 (7) 0.0275 (7) 0.0218 (7) −0.0029 (5) 0.0012 (5) −0.0082 (5)
C18 0.0205 (7) 0.0274 (7) 0.0217 (7) −0.0027 (5) 0.0008 (5) −0.0086 (5)
C23 0.0296 (7) 0.0257 (7) 0.0273 (7) −0.0055 (6) −0.0055 (6) −0.0032 (6)
C22 0.0365 (8) 0.0295 (7) 0.0270 (7) −0.0056 (6) −0.0094 (6) −0.0033 (6)
C15 0.0279 (7) 0.0253 (7) 0.0416 (8) −0.0015 (6) −0.0049 (6) −0.0105 (6)
C24 0.0279 (7) 0.0350 (8) 0.0280 (7) −0.0072 (6) −0.0060 (6) −0.0052 (6)
C16 0.0267 (7) 0.0278 (7) 0.0374 (8) −0.0002 (6) −0.0101 (6) −0.0067 (6)
C21 0.0391 (8) 0.0258 (7) 0.0296 (8) −0.0083 (6) −0.0029 (6) −0.0056 (6)
C20 0.0358 (8) 0.0341 (8) 0.0423 (9) 0.0034 (6) −0.0161 (7) −0.0144 (7)
C19 0.0363 (8) 0.0268 (7) 0.0388 (8) 0.0013 (6) −0.0136 (7) −0.0103 (6)
O4 0.0290 (5) 0.0247 (5) 0.0337 (6) −0.0094 (4) −0.0100 (4) −0.0037 (4)
O2 0.0312 (5) 0.0230 (5) 0.0329 (6) −0.0025 (4) −0.0097 (4) −0.0100 (4)

Geometric parameters (Å, °)

O6—C7 1.3859 (17) C9—H9 0.9500
O6—C6 1.3870 (17) C3—H3 0.9500
O3—C12 1.2193 (16) N1—C15 1.3349 (19)
O7—C7 1.2028 (16) N1—C24 1.3387 (19)
O1—C1 1.2175 (16) N2—C21 1.3271 (19)
O5—C6 1.1977 (16) N2—C20 1.342 (2)
C8—C9 1.3713 (19) C17—C16 1.3926 (19)
C8—C14 1.4179 (19) C17—C23 1.3970 (19)
C8—C7 1.4742 (18) C17—C18 1.4933 (18)
C14—C5 1.4136 (19) C18—C22 1.391 (2)
C14—C13 1.4308 (18) C18—C19 1.393 (2)
C13—C11 1.4305 (18) C23—C24 1.3772 (19)
C13—C2 1.4319 (19) C23—H23 0.9500
C11—C10 1.3808 (19) C22—C21 1.384 (2)
C11—C12 1.5105 (18) C22—H22 0.9500
C2—C3 1.3771 (19) C15—C16 1.380 (2)
C2—C1 1.5098 (18) C15—H15 0.9500
C5—C4 1.374 (2) C24—H24 0.9500
C5—C6 1.4732 (18) C16—H16 0.9500
C10—C9 1.4001 (19) C21—H21 0.9500
C10—H10 0.9500 C20—C19 1.381 (2)
C12—O4 1.3064 (16) C20—H20 0.9500
C4—C3 1.3961 (19) C19—H19 0.9500
C4—H4 0.9500 O4—H4A 0.8400
C1—O2 1.3086 (16) O2—H2 0.8400
C7—O6—C6 123.44 (11) C10—C9—H9 120.1
C9—C8—C14 120.75 (12) C2—C3—C4 122.08 (12)
C9—C8—C7 119.01 (12) C2—C3—H3 119.0
C14—C8—C7 120.24 (12) C4—C3—H3 119.0
C5—C14—C8 119.17 (12) C15—N1—C24 117.78 (12)
C5—C14—C13 120.74 (12) C21—N2—C20 117.59 (12)
C8—C14—C13 120.09 (12) C16—C17—C23 117.10 (12)
C11—C13—C14 117.33 (12) C16—C17—C18 121.60 (12)
C11—C13—C2 125.99 (12) C23—C17—C18 121.28 (12)
C14—C13—C2 116.68 (12) C22—C18—C19 117.07 (12)
C10—C11—C13 120.61 (12) C22—C18—C17 121.26 (12)
C10—C11—C12 114.95 (12) C19—C18—C17 121.63 (12)
C13—C11—C12 124.19 (11) C24—C23—C17 119.81 (13)
C3—C2—C13 120.43 (12) C24—C23—H23 120.1
C3—C2—C1 115.54 (12) C17—C23—H23 120.1
C13—C2—C1 123.96 (12) C21—C22—C18 119.32 (13)
C4—C5—C14 120.61 (12) C21—C22—H22 120.3
C4—C5—C6 119.51 (12) C18—C22—H22 120.3
C14—C5—C6 119.84 (12) N1—C15—C16 123.30 (13)
C11—C10—C9 121.30 (13) N1—C15—H15 118.4
C11—C10—H10 119.3 C16—C15—H15 118.4
C9—C10—H10 119.3 N1—C24—C23 122.70 (13)
O7—C7—O6 116.81 (12) N1—C24—H24 118.7
O7—C7—C8 125.34 (13) C23—C24—H24 118.7
O6—C7—C8 117.76 (12) C15—C16—C17 119.31 (13)
O5—C6—O6 116.80 (12) C15—C16—H16 120.3
O5—C6—C5 125.81 (13) C17—C16—H16 120.3
O6—C6—C5 117.39 (12) N2—C21—C22 123.50 (13)
O3—C12—O4 126.01 (12) N2—C21—H21 118.2
O3—C12—C11 122.11 (12) C22—C21—H21 118.2
O4—C12—C11 111.69 (11) N2—C20—C19 122.72 (14)
C5—C4—C3 119.14 (12) N2—C20—H20 118.6
C5—C4—H4 120.4 C19—C20—H20 118.6
C3—C4—H4 120.4 C20—C19—C18 119.80 (14)
O1—C1—O2 126.31 (12) C20—C19—H19 120.1
O1—C1—C2 122.40 (12) C18—C19—H19 120.1
O2—C1—C2 111.18 (11) C12—O4—H4A 109.5
C8—C9—C10 119.78 (12) C1—O2—H2 109.5
C8—C9—H9 120.1

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2···N2i 0.84 1.77 2.594 (2) 167
O4—H4A···N1ii 0.84 1.74 2.573 (2) 171
C16—H16···O1iii 0.95 2.36 3.254 (2) 157
C22—H22···O3iv 0.95 2.57 3.425 (2) 150

Symmetry codes: (i) x, y−1, z−1; (ii) −x+1, −y+1, −z+1; (iii) x, y, z+1; (iv) −x+1, −y+2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IM2151).

References

  1. Blackburn, A. C., Fitzgerald, L. J. & Gerkin, R. E. (1997). Acta Cryst. C53, 1991–1995. [DOI] [PubMed]
  2. Bruker (1998). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Desiraju, G. R. & Steiner, T. (1999). The Weak Hydrogen Bond Oxford University Press.
  4. Fitzgerald, L. J., Gallucci, J. C. & Gerkin, R. E. (1992). Acta Cryst. C48, 460–465. [DOI] [PubMed]
  5. Robl, C. (1987). Mater. Res. Bull.22, 1645–1652.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Xu, Y.-Q., Yuan, D.-Q., Wu, B.-L., Jiang, F.-L., Zhou, Y. F. & Hong, M.-C. (2005a). Inorg. Chem. Commun.8, 651–655.
  8. Xu, Y.-Q., Yuan, D.-Q., Zhou, Y.-F., Wu, M.-Y. & Hong, M.-C. (2005b). Acta Cryst. E61, o1294–o1296.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809044146/im2151sup1.cif

e-65-o2912-sup1.cif (19.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044146/im2151Isup2.hkl

e-65-o2912-Isup2.hkl (158.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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