Abstract
The conformation of the title compound, C12H17N3O, is consolidated by an intramolecular N—H⋯O hydrogen bond, generating an S(5) ring. In the crystal, inversion dimers linked by pairs of N—H⋯O interactions occur, resulting in R 2 2(8) ring motifs.
Related literature
For related structures, see: Salim et al. (2009 ▶); Shi et al. (2007 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
C12H17N3O
M r = 219.29
Monoclinic,
a = 13.2194 (9) Å
b = 4.3865 (3) Å
c = 21.7413 (13) Å
β = 103.433 (3)°
V = 1226.22 (14) Å3
Z = 4
Mo Kα radiation
μ = 0.08 mm−1
T = 296 K
0.28 × 0.25 × 0.22 mm
Data collection
Bruker Kappa APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.979, T max = 0.984
13485 measured reflections
2998 independent reflections
1608 reflections with I > 2σ(I)
R int = 0.040
Refinement
R[F 2 > 2σ(F 2)] = 0.048
wR(F 2) = 0.166
S = 1.00
2998 reflections
148 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.18 e Å−3
Δρmin = −0.16 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044353/hb5183sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044353/hb5183Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O1 | 0.81 (3) | 2.21 (3) | 2.604 (2) | 110 (2) |
| N2—H2⋯O1i | 0.88 (2) | 2.06 (2) | 2.920 (2) | 166 (2) |
Symmetry code: (i)
.
Acknowledgments
MS gratefully acknowledges the Higher Education Commission, Islamabad, Pakistan, for providing a Scholarship under the Indigenous PhD Program (PIN Code: 042–121068-PS2–109).
supplementary crystallographic information
Comment
Literature has shown that hydrazides as well as their derivatives are characterized by low toxicity and possess a broad spectrum of pharmaceutical activities. The title compound (I, Fig. 1) is one of the several hydrazide derivatives prepared with substitution and alteration of the basic moiety as a key to obtain good potency. In this context we have already reported the crystal structure of 2-(3,4-Dimethylanilino)acetohydrazide (Salim et al., 2009).
The crystal structure of (II) 2-(1H-Benzotriazol-1-yl)-N'-(propan-2-ylidene)acetohydrazide (Shi et al., 2007) has been published which contains the side chain of (I).
In (I) the 2-methylanilinic group A (C1—C6/N1/C12) and the side chain group B (C7/C8/N2/N3/C9—C11/O1) are planar with maximum r. m. s. deviations of 0.0064 and 0.0146 Å respectively, from the respective mean square planes. The dihedral angle between A/B is 4.70 (10)°. In (I), there exists intramolecular H-bonding of N—H···O type (Table 1, Fig. 1) completing S(5) ring motif (Bernstein et al., 1995). The molecules are dimerized due to intermolecular H-bonding of N—H···O type (Table 1, Fig. 2) completing R22(8) ring motif. There does not exist any C–H···π or π···π interactions.
Experimental
2-[(2-Methylphenyl)amino]acetohydrazide (0.9 g, 5 mmol) and acetone (0.29 g, 5 mmol) were refluxed along with stirring in 100 ml of ethylalcohol for 30 minutes and after evaporation of the solvent, the crude product obtained was recrystallized in methylalcohol to obtain colorless prisms of (I).
Refinement
The coordinates of H1, H2, H7A and H7B were refined. The other H-atoms were positioned geometrically (C–H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.2Ueq(carrier) or 1.5Ueq(methyl C).
Figures
Fig. 1.
View of (I) with displacement ellipsoids drawn at the 50% probability level. The dotted line represent the intramolecular H-bond.
Fig. 2.
The partial packing of (I), which shows that molecules form inversion dimers due to H-bondings.
Crystal data
| C12H17N3O | F(000) = 472 |
| Mr = 219.29 | Dx = 1.188 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 2998 reflections |
| a = 13.2194 (9) Å | θ = 3.0–28.2° |
| b = 4.3865 (3) Å | µ = 0.08 mm−1 |
| c = 21.7413 (13) Å | T = 296 K |
| β = 103.433 (3)° | Prism, colourless |
| V = 1226.22 (14) Å3 | 0.28 × 0.25 × 0.22 mm |
| Z = 4 |
Data collection
| Bruker Kappa APEXII CCD diffractometer | 2998 independent reflections |
| Radiation source: fine-focus sealed tube | 1608 reflections with I > 2σ(I) |
| graphite | Rint = 0.040 |
| Detector resolution: 7.40 pixels mm-1 | θmax = 28.2°, θmin = 3.0° |
| ω scans | h = −17→17 |
| Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −5→5 |
| Tmin = 0.979, Tmax = 0.984 | l = −28→28 |
| 13485 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.166 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.00 | w = 1/[σ2(Fo2) + (0.067P)2 + 0.3661P] where P = (Fo2 + 2Fc2)/3 |
| 2998 reflections | (Δ/σ)max < 0.001 |
| 148 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.47742 (12) | 0.3771 (4) | 0.42354 (7) | 0.0780 (6) | |
| N1 | 0.53042 (16) | 0.2794 (5) | 0.31712 (8) | 0.0739 (7) | |
| N2 | 0.61215 (13) | 0.6771 (4) | 0.46619 (8) | 0.0572 (6) | |
| N3 | 0.70384 (12) | 0.8122 (4) | 0.46023 (7) | 0.0550 (5) | |
| C1 | 0.54130 (15) | 0.2216 (5) | 0.25657 (8) | 0.0537 (6) | |
| C2 | 0.46554 (16) | 0.0463 (5) | 0.21591 (9) | 0.0597 (7) | |
| C3 | 0.47980 (19) | −0.0121 (6) | 0.15595 (10) | 0.0751 (9) | |
| C4 | 0.5629 (2) | 0.0969 (6) | 0.13542 (10) | 0.0768 (9) | |
| C5 | 0.63565 (18) | 0.2686 (6) | 0.17511 (10) | 0.0704 (8) | |
| C6 | 0.62626 (15) | 0.3307 (5) | 0.23575 (9) | 0.0622 (7) | |
| C7 | 0.59948 (16) | 0.4699 (5) | 0.36058 (9) | 0.0551 (7) | |
| C8 | 0.55802 (15) | 0.5040 (5) | 0.41921 (8) | 0.0536 (6) | |
| C9 | 0.75244 (15) | 0.9750 (4) | 0.50608 (9) | 0.0524 (6) | |
| C10 | 0.71970 (17) | 1.0357 (6) | 0.56608 (9) | 0.0674 (8) | |
| C11 | 0.85192 (17) | 1.1136 (6) | 0.49869 (11) | 0.0728 (8) | |
| C12 | 0.3731 (2) | −0.0733 (7) | 0.23729 (13) | 0.0865 (10) | |
| H1 | 0.478 (2) | 0.222 (6) | 0.3270 (12) | 0.0887* | |
| H2 | 0.5864 (16) | 0.694 (5) | 0.4998 (11) | 0.0686* | |
| H3 | 0.43077 | −0.13040 | 0.12853 | 0.0902* | |
| H4 | 0.56980 | 0.05417 | 0.09469 | 0.0922* | |
| H5 | 0.69216 | 0.34476 | 0.16126 | 0.0845* | |
| H6 | 0.67688 | 0.44581 | 0.26275 | 0.0747* | |
| H7A | 0.6053 (16) | 0.673 (5) | 0.3444 (10) | 0.0661* | |
| H7B | 0.6679 (17) | 0.383 (5) | 0.3735 (10) | 0.0661* | |
| H10A | 0.65304 | 1.13419 | 0.55670 | 0.1011* | |
| H10B | 0.76993 | 1.16536 | 0.59273 | 0.1011* | |
| H10C | 0.71507 | 0.84643 | 0.58744 | 0.1011* | |
| H11A | 0.86472 | 1.05450 | 0.45867 | 0.1092* | |
| H11B | 0.90797 | 1.04383 | 0.53216 | 0.1092* | |
| H11C | 0.84711 | 1.33164 | 0.50050 | 0.1092* | |
| H12A | 0.39624 | −0.20103 | 0.27369 | 0.1299* | |
| H12B | 0.33007 | −0.18975 | 0.20383 | 0.1299* | |
| H12C | 0.33383 | 0.09441 | 0.24803 | 0.1299* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0743 (10) | 0.1126 (13) | 0.0574 (9) | −0.0338 (9) | 0.0366 (7) | −0.0246 (8) |
| N1 | 0.0746 (12) | 0.1060 (16) | 0.0500 (10) | −0.0339 (11) | 0.0325 (9) | −0.0234 (10) |
| N2 | 0.0590 (10) | 0.0746 (12) | 0.0433 (9) | −0.0111 (8) | 0.0229 (7) | −0.0086 (8) |
| N3 | 0.0568 (9) | 0.0646 (10) | 0.0474 (9) | −0.0067 (8) | 0.0196 (7) | −0.0032 (8) |
| C1 | 0.0570 (11) | 0.0650 (12) | 0.0420 (10) | 0.0042 (9) | 0.0173 (8) | −0.0040 (9) |
| C2 | 0.0613 (12) | 0.0670 (13) | 0.0512 (11) | 0.0067 (10) | 0.0141 (9) | −0.0076 (10) |
| C3 | 0.0838 (16) | 0.0852 (17) | 0.0534 (12) | 0.0070 (13) | 0.0099 (11) | −0.0179 (12) |
| C4 | 0.0926 (17) | 0.0973 (18) | 0.0456 (11) | 0.0234 (15) | 0.0262 (12) | −0.0069 (12) |
| C5 | 0.0678 (13) | 0.0986 (18) | 0.0523 (12) | 0.0206 (13) | 0.0291 (11) | 0.0085 (12) |
| C6 | 0.0561 (11) | 0.0851 (15) | 0.0489 (11) | 0.0012 (10) | 0.0192 (9) | −0.0021 (10) |
| C7 | 0.0580 (11) | 0.0679 (14) | 0.0431 (10) | −0.0073 (10) | 0.0195 (9) | −0.0039 (10) |
| C8 | 0.0571 (11) | 0.0649 (12) | 0.0426 (10) | −0.0054 (10) | 0.0192 (8) | −0.0049 (9) |
| C9 | 0.0565 (10) | 0.0556 (11) | 0.0467 (10) | −0.0007 (9) | 0.0152 (8) | 0.0010 (9) |
| C10 | 0.0738 (14) | 0.0787 (15) | 0.0522 (12) | −0.0106 (12) | 0.0198 (10) | −0.0122 (11) |
| C11 | 0.0697 (13) | 0.0839 (16) | 0.0685 (14) | −0.0171 (12) | 0.0234 (11) | −0.0067 (12) |
| C12 | 0.0758 (15) | 0.102 (2) | 0.0831 (17) | −0.0268 (14) | 0.0212 (13) | −0.0220 (15) |
Geometric parameters (Å, °)
| O1—C8 | 1.225 (3) | C9—C10 | 1.491 (3) |
| N1—C1 | 1.381 (2) | C3—H3 | 0.9300 |
| N1—C7 | 1.423 (3) | C4—H4 | 0.9300 |
| N2—N3 | 1.382 (2) | C5—H5 | 0.9300 |
| N2—C8 | 1.339 (3) | C6—H6 | 0.9300 |
| N3—C9 | 1.272 (2) | C7—H7A | 0.97 (2) |
| N1—H1 | 0.81 (3) | C7—H7B | 0.96 (2) |
| N2—H2 | 0.88 (2) | C10—H10A | 0.9600 |
| C1—C2 | 1.402 (3) | C10—H10B | 0.9600 |
| C1—C6 | 1.390 (3) | C10—H10C | 0.9600 |
| C2—C3 | 1.384 (3) | C11—H11A | 0.9600 |
| C2—C12 | 1.500 (4) | C11—H11B | 0.9600 |
| C3—C4 | 1.365 (4) | C11—H11C | 0.9600 |
| C4—C5 | 1.361 (3) | C12—H12A | 0.9600 |
| C5—C6 | 1.380 (3) | C12—H12B | 0.9600 |
| C7—C8 | 1.507 (3) | C12—H12C | 0.9600 |
| C9—C11 | 1.491 (3) | ||
| C1—N1—C7 | 123.25 (19) | C4—C5—H5 | 120.00 |
| N3—N2—C8 | 119.78 (16) | C6—C5—H5 | 120.00 |
| N2—N3—C9 | 117.48 (16) | C1—C6—H6 | 120.00 |
| C7—N1—H1 | 117.5 (18) | C5—C6—H6 | 120.00 |
| C1—N1—H1 | 118.7 (18) | N1—C7—H7A | 113.1 (13) |
| N3—N2—H2 | 124.1 (15) | N1—C7—H7B | 112.1 (13) |
| C8—N2—H2 | 116.2 (15) | C8—C7—H7A | 106.9 (13) |
| N1—C1—C2 | 118.99 (19) | C8—C7—H7B | 107.1 (13) |
| N1—C1—C6 | 121.23 (19) | H7A—C7—H7B | 108.8 (19) |
| C2—C1—C6 | 119.78 (17) | C9—C10—H10A | 109.00 |
| C3—C2—C12 | 121.8 (2) | C9—C10—H10B | 109.00 |
| C1—C2—C3 | 117.5 (2) | C9—C10—H10C | 109.00 |
| C1—C2—C12 | 120.72 (19) | H10A—C10—H10B | 109.00 |
| C2—C3—C4 | 122.7 (2) | H10A—C10—H10C | 109.00 |
| C3—C4—C5 | 119.4 (2) | H10B—C10—H10C | 109.00 |
| C4—C5—C6 | 120.5 (2) | C9—C11—H11A | 109.00 |
| C1—C6—C5 | 120.14 (19) | C9—C11—H11B | 109.00 |
| N1—C7—C8 | 108.46 (18) | C9—C11—H11C | 109.00 |
| O1—C8—N2 | 121.29 (17) | H11A—C11—H11B | 109.00 |
| O1—C8—C7 | 120.90 (18) | H11A—C11—H11C | 109.00 |
| N2—C8—C7 | 117.81 (18) | H11B—C11—H11C | 109.00 |
| N3—C9—C11 | 116.23 (18) | C2—C12—H12A | 109.00 |
| C10—C9—C11 | 117.65 (18) | C2—C12—H12B | 109.00 |
| N3—C9—C10 | 126.12 (19) | C2—C12—H12C | 109.00 |
| C2—C3—H3 | 119.00 | H12A—C12—H12B | 109.00 |
| C4—C3—H3 | 119.00 | H12A—C12—H12C | 109.00 |
| C3—C4—H4 | 120.00 | H12B—C12—H12C | 109.00 |
| C5—C4—H4 | 120.00 | ||
| C7—N1—C1—C2 | −176.0 (2) | C6—C1—C2—C12 | −179.9 (2) |
| C7—N1—C1—C6 | 4.8 (3) | N1—C1—C6—C5 | 179.7 (2) |
| C1—N1—C7—C8 | 174.7 (2) | C2—C1—C6—C5 | 0.5 (3) |
| C8—N2—N3—C9 | 179.89 (19) | C1—C2—C3—C4 | −0.9 (4) |
| N3—N2—C8—O1 | 178.75 (19) | C12—C2—C3—C4 | 179.4 (2) |
| N3—N2—C8—C7 | −1.3 (3) | C2—C3—C4—C5 | 0.4 (4) |
| N2—N3—C9—C10 | −0.2 (3) | C3—C4—C5—C6 | 0.5 (4) |
| N2—N3—C9—C11 | 179.05 (18) | C4—C5—C6—C1 | −0.9 (4) |
| N1—C1—C2—C3 | −178.8 (2) | N1—C7—C8—O1 | 0.2 (3) |
| N1—C1—C2—C12 | 0.9 (3) | N1—C7—C8—N2 | −179.80 (19) |
| C6—C1—C2—C3 | 0.4 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O1 | 0.81 (3) | 2.21 (3) | 2.604 (2) | 110 (2) |
| N2—H2···O1i | 0.88 (2) | 2.06 (2) | 2.920 (2) | 166 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5183).
References
- Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555-1573.
- Bruker (2005). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
- Farrugia, L. J. (1999). J. Appl. Cryst.32, 837–838.
- Salim, M., Mahmood, Z., Tahir, M. N., Ahmad, S. & Yaseen, M. (2009). Acta Cryst. E65, o2595. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Shi, Z.-Q., Ji, N.-N., Zheng, Z.-B. & Li, J.-K. (2007). Acta Cryst. E63, o4561.
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044353/hb5183sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044353/hb5183Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


