Abstract
In the title compound, C14H13N3O3, the two six-membered rings are oriented at a dihedral angle of 15.17 (11)° and an intramolecular O—H⋯O hydrogen bond occurs. In the crystal, molecules interact by way of N—H⋯O, O—H⋯N and C—H⋯O hydrogen bonds, thereby generating S(5) chain and R 2 1(7) ring motifs.
Related literature
For related structures, see: Liu & Shi (2007 ▶); Shi et al. (2007 ▶); Shafiq et al. (2009 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶).
Experimental
Crystal data
C14H13N3O3
M r = 271.27
Monoclinic,
a = 14.8543 (10) Å
b = 12.4943 (9) Å
c = 7.7162 (5) Å
β = 116.716 (2)°
V = 1279.20 (15) Å3
Z = 4
Mo Kα radiation
μ = 0.10 mm−1
T = 296 K
0.32 × 0.14 × 0.10 mm
Data collection
Bruker Kappa APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.973, T max = 0.984
7060 measured reflections
1613 independent reflections
1431 reflections with I > 2σ(I)
R int = 0.028
Refinement
R[F 2 > 2σ(F 2)] = 0.034
wR(F 2) = 0.086
S = 1.04
1613 reflections
183 parameters
2 restraints
H-atom parameters constrained
Δρmax = 0.16 e Å−3
Δρmin = −0.21 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044134/hb5177sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044134/hb5177Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O2—H2B⋯O3 | 0.82 | 2.25 | 2.694 (2) | 114 |
| N2—H2A⋯O1i | 0.86 | 2.25 | 3.089 (2) | 164 |
| O2—H2B⋯N1ii | 0.82 | 1.96 | 2.703 (3) | 150 |
| C5—H5⋯O1i | 0.93 | 2.55 | 3.410 (3) | 153 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
AH gratefully acknowledges the Higher Education Commission, Islamabad, Pakistan, for providing him with a Scholaship under the Indigenous PhD Program (PIN 063–121531-PS3–127).
supplementary crystallographic information
Comment
We have reported the crystal structures of (II) N'-[(E)-(4-Hydroxy-3-methoxyphenyl)methylidene]benzohydrazide (Shafiq et al., 2009). The title compound (I, Fig. 1), has been prepared in continuation of synthesizing hydrazide derivatives.
The crystal structure of (III) N'-(4-Hydroxy-3-methoxybenzylidene)isonicotinohydrazide monohydrate (Shi et al., 2007) and (IV) N'-(4-Hydroxy-3-methoxybenzylidene)isonicotinohydrazide methanol solvate (Liu & Shi, 2007) have also been reported. The title compound differs from (III) and (IV) as there is no solvate.
In the title compound the pyridine ring A (C1–C3/N1/C4/C5) and the benzene ring of vanilline B (C8—C13) are planar with a maximum r. m. s. deviations of 0.0061 and 0.0122 Å respectively, from their mean square planes. The dihedral angle between A/B is 15.17 (11)°. The intramolecular H-bonding of O—H···O type completes S(5) ring motif (Bernstein et al., 1995). There also exist R21(7) ring motif due to intermolecular H-bondings of C—H···O and N—H···O type (Table 1, Fig. 2). The molecules are stabilized in the form of two dimensional polymeric sheets owing to intermolecular H-bondings of O—H···N type (Fig. 2).
Experimental
To a hot stirred solution of isoniazid (1.37 g, 0.01 mol) in ethanol (15 ml) was added vanillin (1.52 g, 0.01 mol). The resultant mixture was then heated under reflux. After an hour precipitates were formed. The reaction mixture was further heated about 30 min for the completion of the reaction which was monitored through TLC. The reaction mixture was cooled to room temperature, filtered and washed with hot ethanol. Yellow needles of (I) were obtained by recrystallization of the crude product in 1,4-dioxan:ethanol (1:1) after two days.
Refinement
In the absence of significant anomalous dispersion effects, Friedel pairs were averaged before refinement.
The H-atoms were positioned geometrically (O–H = 0.82 Å, N–H = 0.86 Å, C–H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.2Ueq(carrier) or 1.5Ueq(methyl C).
Figures
Fig. 1.
View of (I) with displacement ellipsoids drawn at the 50% probability level. H-atoms are shown by spheres of arbitrary radius. The dotted line represent the intramolecular H-bondings.
Fig. 2.
The partial packing of (I), which shows that molecules form two dimensional polymeric chains.
Crystal data
| C14H13N3O3 | F(000) = 568 |
| Mr = 271.27 | Dx = 1.409 Mg m−3 |
| Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: C -2yc | Cell parameters from 1613 reflections |
| a = 14.8543 (10) Å | θ = 2.2–28.7° |
| b = 12.4943 (9) Å | µ = 0.10 mm−1 |
| c = 7.7162 (5) Å | T = 296 K |
| β = 116.716 (2)° | Needle, yellow |
| V = 1279.20 (15) Å3 | 0.32 × 0.14 × 0.10 mm |
| Z = 4 |
Data collection
| Bruker Kappa APEXII CCD diffractometer | 1613 independent reflections |
| Radiation source: fine-focus sealed tube | 1431 reflections with I > 2σ(I) |
| graphite | Rint = 0.028 |
| Detector resolution: 7.40 pixels mm-1 | θmax = 28.7°, θmin = 2.2° |
| ω scans | h = −17→19 |
| Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −16→16 |
| Tmin = 0.973, Tmax = 0.984 | l = −10→5 |
| 7060 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.086 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0491P)2 + 0.2451P] where P = (Fo2 + 2Fc2)/3 |
| 1613 reflections | (Δ/σ)max < 0.001 |
| 183 parameters | Δρmax = 0.16 e Å−3 |
| 2 restraints | Δρmin = −0.21 e Å−3 |
Special details
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.20978 (12) | −0.14131 (15) | 0.1499 (2) | 0.0464 (5) | |
| O2 | 0.74733 (14) | 0.23723 (14) | 0.7114 (3) | 0.0495 (5) | |
| O3 | 0.71022 (13) | 0.02563 (13) | 0.6995 (3) | 0.0462 (5) | |
| N1 | −0.10456 (14) | −0.14377 (17) | −0.4734 (3) | 0.0415 (6) | |
| N2 | 0.24963 (13) | −0.01999 (16) | −0.0200 (2) | 0.0357 (5) | |
| N3 | 0.34327 (13) | −0.00082 (17) | 0.1376 (3) | 0.0371 (5) | |
| C1 | 0.08684 (14) | −0.10723 (18) | −0.1727 (3) | 0.0302 (6) | |
| C2 | 0.03464 (17) | −0.2001 (2) | −0.1794 (3) | 0.0400 (7) | |
| C3 | −0.06004 (17) | −0.2154 (2) | −0.3320 (4) | 0.0455 (8) | |
| C4 | −0.05475 (16) | −0.0540 (2) | −0.4634 (3) | 0.0387 (6) | |
| C5 | 0.04083 (16) | −0.03215 (18) | −0.3174 (3) | 0.0342 (6) | |
| C6 | 0.18841 (15) | −0.09215 (18) | −0.0012 (3) | 0.0317 (6) | |
| C7 | 0.38334 (15) | 0.08629 (19) | 0.1254 (3) | 0.0355 (6) | |
| C8 | 0.48092 (15) | 0.12099 (18) | 0.2766 (3) | 0.0322 (6) | |
| C9 | 0.54708 (16) | 0.05029 (18) | 0.4162 (3) | 0.0338 (6) | |
| C10 | 0.63784 (15) | 0.08723 (18) | 0.5602 (3) | 0.0320 (6) | |
| C11 | 0.66190 (15) | 0.19614 (18) | 0.5701 (3) | 0.0318 (6) | |
| C12 | 0.59690 (16) | 0.26504 (19) | 0.4295 (3) | 0.0353 (6) | |
| C13 | 0.50728 (15) | 0.22751 (19) | 0.2826 (3) | 0.0360 (6) | |
| C14 | 0.70271 (18) | −0.08742 (19) | 0.6725 (4) | 0.0424 (7) | |
| H2 | 0.06282 | −0.25144 | −0.08249 | 0.0480* | |
| H2A | 0.23175 | 0.01414 | −0.12720 | 0.0428* | |
| H2B | 0.77967 | 0.18945 | 0.78640 | 0.0594* | |
| H3 | −0.09420 | −0.27850 | −0.33636 | 0.0546* | |
| H4 | −0.08569 | −0.00289 | −0.55979 | 0.0465* | |
| H5 | 0.07325 | 0.03162 | −0.31695 | 0.0411* | |
| H7 | 0.34970 | 0.12947 | 0.01696 | 0.0425* | |
| H9 | 0.53013 | −0.02163 | 0.41231 | 0.0405* | |
| H12 | 0.61341 | 0.33710 | 0.43342 | 0.0424* | |
| H13 | 0.46457 | 0.27431 | 0.18744 | 0.0432* | |
| H14A | 0.70409 | −0.10498 | 0.55254 | 0.0636* | |
| H14B | 0.64062 | −0.11205 | 0.66859 | 0.0636* | |
| H14C | 0.75836 | −0.12140 | 0.77800 | 0.0636* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0372 (9) | 0.0570 (11) | 0.0298 (8) | −0.0070 (8) | 0.0015 (7) | 0.0075 (7) |
| O2 | 0.0341 (8) | 0.0373 (9) | 0.0468 (9) | −0.0080 (7) | −0.0086 (7) | 0.0022 (8) |
| O3 | 0.0347 (8) | 0.0346 (9) | 0.0433 (9) | −0.0031 (7) | −0.0056 (7) | 0.0066 (7) |
| N1 | 0.0238 (8) | 0.0486 (12) | 0.0369 (10) | −0.0013 (8) | 0.0001 (7) | −0.0017 (8) |
| N2 | 0.0252 (9) | 0.0448 (11) | 0.0234 (8) | −0.0053 (8) | −0.0013 (7) | 0.0011 (7) |
| N3 | 0.0233 (8) | 0.0481 (11) | 0.0253 (8) | −0.0042 (8) | −0.0021 (7) | −0.0012 (8) |
| C1 | 0.0226 (9) | 0.0371 (11) | 0.0235 (9) | −0.0011 (8) | 0.0037 (8) | −0.0041 (8) |
| C2 | 0.0317 (12) | 0.0392 (12) | 0.0366 (11) | −0.0011 (9) | 0.0042 (10) | 0.0068 (10) |
| C3 | 0.0302 (12) | 0.0441 (14) | 0.0484 (13) | −0.0087 (10) | 0.0054 (10) | 0.0025 (11) |
| C4 | 0.0258 (10) | 0.0455 (13) | 0.0316 (10) | 0.0017 (9) | 0.0011 (8) | 0.0037 (9) |
| C5 | 0.0260 (10) | 0.0387 (12) | 0.0295 (10) | −0.0028 (9) | 0.0050 (8) | −0.0021 (9) |
| C6 | 0.0242 (9) | 0.0376 (12) | 0.0240 (9) | 0.0021 (8) | 0.0027 (8) | −0.0028 (8) |
| C7 | 0.0257 (10) | 0.0421 (12) | 0.0281 (10) | −0.0004 (9) | 0.0028 (8) | 0.0005 (9) |
| C8 | 0.0230 (9) | 0.0403 (12) | 0.0269 (9) | −0.0028 (9) | 0.0055 (8) | −0.0015 (9) |
| C9 | 0.0280 (10) | 0.0311 (11) | 0.0327 (10) | −0.0059 (8) | 0.0052 (8) | 0.0006 (8) |
| C10 | 0.0258 (9) | 0.0326 (11) | 0.0291 (9) | −0.0010 (8) | 0.0048 (8) | 0.0027 (8) |
| C11 | 0.0242 (9) | 0.0343 (11) | 0.0296 (10) | −0.0037 (8) | 0.0055 (8) | −0.0018 (8) |
| C12 | 0.0323 (11) | 0.0304 (11) | 0.0358 (11) | −0.0033 (9) | 0.0087 (9) | −0.0007 (9) |
| C13 | 0.0295 (11) | 0.0387 (12) | 0.0305 (10) | 0.0035 (9) | 0.0053 (9) | 0.0039 (9) |
| C14 | 0.0352 (12) | 0.0342 (12) | 0.0485 (13) | 0.0013 (10) | 0.0105 (10) | 0.0065 (10) |
Geometric parameters (Å, °)
| O1—C6 | 1.227 (3) | C8—C13 | 1.382 (3) |
| O2—C11 | 1.349 (3) | C8—C9 | 1.398 (3) |
| O3—C10 | 1.366 (3) | C9—C10 | 1.385 (3) |
| O3—C14 | 1.425 (3) | C10—C11 | 1.400 (3) |
| O2—H2B | 0.8200 | C11—C12 | 1.382 (3) |
| N1—C3 | 1.334 (3) | C12—C13 | 1.386 (3) |
| N1—C4 | 1.327 (3) | C2—H2 | 0.9300 |
| N2—C6 | 1.334 (3) | C3—H3 | 0.9300 |
| N2—N3 | 1.396 (3) | C4—H4 | 0.9300 |
| N3—C7 | 1.264 (3) | C5—H5 | 0.9300 |
| N2—H2A | 0.8600 | C7—H7 | 0.9300 |
| C1—C5 | 1.381 (3) | C9—H9 | 0.9300 |
| C1—C2 | 1.384 (3) | C12—H12 | 0.9300 |
| C1—C6 | 1.506 (3) | C13—H13 | 0.9300 |
| C2—C3 | 1.383 (4) | C14—H14A | 0.9600 |
| C4—C5 | 1.386 (3) | C14—H14B | 0.9600 |
| C7—C8 | 1.459 (3) | C14—H14C | 0.9600 |
| C10—O3—C14 | 117.5 (2) | O2—C11—C10 | 122.6 (2) |
| C11—O2—H2B | 109.00 | C10—C11—C12 | 119.5 (2) |
| C3—N1—C4 | 117.5 (2) | C11—C12—C13 | 120.5 (2) |
| N3—N2—C6 | 118.82 (17) | C8—C13—C12 | 120.5 (2) |
| N2—N3—C7 | 113.6 (2) | C1—C2—H2 | 120.00 |
| C6—N2—H2A | 121.00 | C3—C2—H2 | 120.00 |
| N3—N2—H2A | 121.00 | N1—C3—H3 | 119.00 |
| C2—C1—C5 | 118.3 (2) | C2—C3—H3 | 119.00 |
| C2—C1—C6 | 117.45 (19) | N1—C4—H4 | 118.00 |
| C5—C1—C6 | 124.2 (2) | C5—C4—H4 | 118.00 |
| C1—C2—C3 | 119.1 (2) | C1—C5—H5 | 121.00 |
| N1—C3—C2 | 123.0 (2) | C4—C5—H5 | 121.00 |
| N1—C4—C5 | 123.7 (2) | N3—C7—H7 | 119.00 |
| C1—C5—C4 | 118.5 (2) | C8—C7—H7 | 119.00 |
| O1—C6—N2 | 123.0 (2) | C8—C9—H9 | 120.00 |
| N2—C6—C1 | 116.85 (18) | C10—C9—H9 | 120.00 |
| O1—C6—C1 | 120.1 (2) | C11—C12—H12 | 120.00 |
| N3—C7—C8 | 121.9 (2) | C13—C12—H12 | 120.00 |
| C7—C8—C13 | 118.5 (2) | C8—C13—H13 | 120.00 |
| C7—C8—C9 | 122.0 (2) | C12—C13—H13 | 120.00 |
| C9—C8—C13 | 119.5 (2) | O3—C14—H14A | 109.00 |
| C8—C9—C10 | 120.1 (2) | O3—C14—H14B | 109.00 |
| O3—C10—C9 | 125.6 (2) | O3—C14—H14C | 109.00 |
| O3—C10—C11 | 114.4 (2) | H14A—C14—H14B | 109.00 |
| C9—C10—C11 | 120.0 (2) | H14A—C14—H14C | 109.00 |
| O2—C11—C12 | 118.0 (2) | H14B—C14—H14C | 110.00 |
| C14—O3—C10—C9 | 14.0 (4) | N1—C4—C5—C1 | −0.7 (4) |
| C14—O3—C10—C11 | −165.5 (2) | N3—C7—C8—C9 | 16.8 (4) |
| C4—N1—C3—C2 | −0.6 (4) | N3—C7—C8—C13 | −162.1 (2) |
| C3—N1—C4—C5 | 1.3 (4) | C7—C8—C9—C10 | −178.3 (2) |
| C6—N2—N3—C7 | −162.0 (2) | C13—C8—C9—C10 | 0.6 (4) |
| N3—N2—C6—O1 | 1.4 (3) | C7—C8—C13—C12 | 176.7 (2) |
| N3—N2—C6—C1 | 177.92 (19) | C9—C8—C13—C12 | −2.3 (4) |
| N2—N3—C7—C8 | 179.5 (2) | C8—C9—C10—O3 | −177.3 (2) |
| C5—C1—C2—C3 | 1.5 (4) | C8—C9—C10—C11 | 2.2 (4) |
| C6—C1—C2—C3 | 178.3 (2) | O3—C10—C11—O2 | −3.1 (3) |
| C2—C1—C5—C4 | −0.8 (3) | O3—C10—C11—C12 | 176.2 (2) |
| C6—C1—C5—C4 | −177.4 (2) | C9—C10—C11—O2 | 177.4 (2) |
| C2—C1—C6—O1 | −21.5 (3) | C9—C10—C11—C12 | −3.4 (4) |
| C2—C1—C6—N2 | 161.9 (2) | O2—C11—C12—C13 | −179.0 (2) |
| C5—C1—C6—O1 | 155.1 (2) | C10—C11—C12—C13 | 1.7 (4) |
| C5—C1—C6—N2 | −21.5 (3) | C11—C12—C13—C8 | 1.1 (4) |
| C1—C2—C3—N1 | −0.8 (4) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H2B···O3 | 0.82 | 2.25 | 2.694 (2) | 114 |
| N2—H2A···O1i | 0.86 | 2.25 | 3.089 (2) | 164 |
| O2—H2B···N1ii | 0.82 | 1.96 | 2.703 (3) | 150 |
| C5—H5···O1i | 0.93 | 2.55 | 3.410 (3) | 153 |
Symmetry codes: (i) x, −y, z−1/2; (ii) x+1, −y, z+3/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5177).
References
- Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555-1573.
- Bruker (2005). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
- Farrugia, L. J. (1999). J. Appl. Cryst.32, 837–838.
- Liu, X. & Shi, X.-F. (2007). Acta Cryst. E63, o4807.
- Shafiq, Z., Yaqub, M., Tahir, M. N., Hussain, A. & Iqbal, M. S. (2009). Acta Cryst. E65, o2898. [DOI] [PMC free article] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Shi, X.-F., He, L., Ma, G.-Z. & Yuan, C.-C. (2007). Acta Cryst. E63, o1119–o1120.
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044134/hb5177sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044134/hb5177Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


