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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Oct 28;65(Pt 11):o2899. doi: 10.1107/S1600536809044134

N′-[(E)-4-Hydr­oxy-3-methoxy­benzyl­idene]pyridine-4-carbohydrazide

Zahid Shafiq a, Muhammad Yaqub b, M Nawaz Tahir c,*, Abid Hussain b, M Saeed Iqbal d
PMCID: PMC2971391  PMID: 21578481

Abstract

In the title compound, C14H13N3O3, the two six-membered rings are oriented at a dihedral angle of 15.17 (11)° and an intra­molecular O—H⋯O hydrogen bond occurs. In the crystal, mol­ecules inter­act by way of N—H⋯O, O—H⋯N and C—H⋯O hydrogen bonds, thereby generating S(5) chain and R 2 1(7) ring motifs.

Related literature

For related structures, see: Liu & Shi (2007); Shi et al. (2007); Shafiq et al. (2009). For graph-set theory, see: Bernstein et al. (1995).graphic file with name e-65-o2899-scheme1.jpg

Experimental

Crystal data

  • C14H13N3O3

  • M r = 271.27

  • Monoclinic, Inline graphic

  • a = 14.8543 (10) Å

  • b = 12.4943 (9) Å

  • c = 7.7162 (5) Å

  • β = 116.716 (2)°

  • V = 1279.20 (15) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 296 K

  • 0.32 × 0.14 × 0.10 mm

Data collection

  • Bruker Kappa APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2005) T min = 0.973, T max = 0.984

  • 7060 measured reflections

  • 1613 independent reflections

  • 1431 reflections with I > 2σ(I)

  • R int = 0.028

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.086

  • S = 1.04

  • 1613 reflections

  • 183 parameters

  • 2 restraints

  • H-atom parameters constrained

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.21 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044134/hb5177sup1.cif

e-65-o2899-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044134/hb5177Isup2.hkl

e-65-o2899-Isup2.hkl (77.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2B⋯O3 0.82 2.25 2.694 (2) 114
N2—H2A⋯O1i 0.86 2.25 3.089 (2) 164
O2—H2B⋯N1ii 0.82 1.96 2.703 (3) 150
C5—H5⋯O1i 0.93 2.55 3.410 (3) 153

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

AH gratefully acknowledges the Higher Education Commission, Islamabad, Pakistan, for providing him with a Scholaship under the Indigenous PhD Program (PIN 063–121531-PS3–127).

supplementary crystallographic information

Comment

We have reported the crystal structures of (II) N'-[(E)-(4-Hydroxy-3-methoxyphenyl)methylidene]benzohydrazide (Shafiq et al., 2009). The title compound (I, Fig. 1), has been prepared in continuation of synthesizing hydrazide derivatives.

The crystal structure of (III) N'-(4-Hydroxy-3-methoxybenzylidene)isonicotinohydrazide monohydrate (Shi et al., 2007) and (IV) N'-(4-Hydroxy-3-methoxybenzylidene)isonicotinohydrazide methanol solvate (Liu & Shi, 2007) have also been reported. The title compound differs from (III) and (IV) as there is no solvate.

In the title compound the pyridine ring A (C1–C3/N1/C4/C5) and the benzene ring of vanilline B (C8—C13) are planar with a maximum r. m. s. deviations of 0.0061 and 0.0122 Å respectively, from their mean square planes. The dihedral angle between A/B is 15.17 (11)°. The intramolecular H-bonding of O—H···O type completes S(5) ring motif (Bernstein et al., 1995). There also exist R21(7) ring motif due to intermolecular H-bondings of C—H···O and N—H···O type (Table 1, Fig. 2). The molecules are stabilized in the form of two dimensional polymeric sheets owing to intermolecular H-bondings of O—H···N type (Fig. 2).

Experimental

To a hot stirred solution of isoniazid (1.37 g, 0.01 mol) in ethanol (15 ml) was added vanillin (1.52 g, 0.01 mol). The resultant mixture was then heated under reflux. After an hour precipitates were formed. The reaction mixture was further heated about 30 min for the completion of the reaction which was monitored through TLC. The reaction mixture was cooled to room temperature, filtered and washed with hot ethanol. Yellow needles of (I) were obtained by recrystallization of the crude product in 1,4-dioxan:ethanol (1:1) after two days.

Refinement

In the absence of significant anomalous dispersion effects, Friedel pairs were averaged before refinement.

The H-atoms were positioned geometrically (O–H = 0.82 Å, N–H = 0.86 Å, C–H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.2Ueq(carrier) or 1.5Ueq(methyl C).

Figures

Fig. 1.

Fig. 1.

View of (I) with displacement ellipsoids drawn at the 50% probability level. H-atoms are shown by spheres of arbitrary radius. The dotted line represent the intramolecular H-bondings.

Fig. 2.

Fig. 2.

The partial packing of (I), which shows that molecules form two dimensional polymeric chains.

Crystal data

C14H13N3O3 F(000) = 568
Mr = 271.27 Dx = 1.409 Mg m3
Monoclinic, Cc Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2yc Cell parameters from 1613 reflections
a = 14.8543 (10) Å θ = 2.2–28.7°
b = 12.4943 (9) Å µ = 0.10 mm1
c = 7.7162 (5) Å T = 296 K
β = 116.716 (2)° Needle, yellow
V = 1279.20 (15) Å3 0.32 × 0.14 × 0.10 mm
Z = 4

Data collection

Bruker Kappa APEXII CCD diffractometer 1613 independent reflections
Radiation source: fine-focus sealed tube 1431 reflections with I > 2σ(I)
graphite Rint = 0.028
Detector resolution: 7.40 pixels mm-1 θmax = 28.7°, θmin = 2.2°
ω scans h = −17→19
Absorption correction: multi-scan (SADABS; Bruker, 2005) k = −16→16
Tmin = 0.973, Tmax = 0.984 l = −10→5
7060 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0491P)2 + 0.2451P] where P = (Fo2 + 2Fc2)/3
1613 reflections (Δ/σ)max < 0.001
183 parameters Δρmax = 0.16 e Å3
2 restraints Δρmin = −0.21 e Å3

Special details

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.20978 (12) −0.14131 (15) 0.1499 (2) 0.0464 (5)
O2 0.74733 (14) 0.23723 (14) 0.7114 (3) 0.0495 (5)
O3 0.71022 (13) 0.02563 (13) 0.6995 (3) 0.0462 (5)
N1 −0.10456 (14) −0.14377 (17) −0.4734 (3) 0.0415 (6)
N2 0.24963 (13) −0.01999 (16) −0.0200 (2) 0.0357 (5)
N3 0.34327 (13) −0.00082 (17) 0.1376 (3) 0.0371 (5)
C1 0.08684 (14) −0.10723 (18) −0.1727 (3) 0.0302 (6)
C2 0.03464 (17) −0.2001 (2) −0.1794 (3) 0.0400 (7)
C3 −0.06004 (17) −0.2154 (2) −0.3320 (4) 0.0455 (8)
C4 −0.05475 (16) −0.0540 (2) −0.4634 (3) 0.0387 (6)
C5 0.04083 (16) −0.03215 (18) −0.3174 (3) 0.0342 (6)
C6 0.18841 (15) −0.09215 (18) −0.0012 (3) 0.0317 (6)
C7 0.38334 (15) 0.08629 (19) 0.1254 (3) 0.0355 (6)
C8 0.48092 (15) 0.12099 (18) 0.2766 (3) 0.0322 (6)
C9 0.54708 (16) 0.05029 (18) 0.4162 (3) 0.0338 (6)
C10 0.63784 (15) 0.08723 (18) 0.5602 (3) 0.0320 (6)
C11 0.66190 (15) 0.19614 (18) 0.5701 (3) 0.0318 (6)
C12 0.59690 (16) 0.26504 (19) 0.4295 (3) 0.0353 (6)
C13 0.50728 (15) 0.22751 (19) 0.2826 (3) 0.0360 (6)
C14 0.70271 (18) −0.08742 (19) 0.6725 (4) 0.0424 (7)
H2 0.06282 −0.25144 −0.08249 0.0480*
H2A 0.23175 0.01414 −0.12720 0.0428*
H2B 0.77967 0.18945 0.78640 0.0594*
H3 −0.09420 −0.27850 −0.33636 0.0546*
H4 −0.08569 −0.00289 −0.55979 0.0465*
H5 0.07325 0.03162 −0.31695 0.0411*
H7 0.34970 0.12947 0.01696 0.0425*
H9 0.53013 −0.02163 0.41231 0.0405*
H12 0.61341 0.33710 0.43342 0.0424*
H13 0.46457 0.27431 0.18744 0.0432*
H14A 0.70409 −0.10498 0.55254 0.0636*
H14B 0.64062 −0.11205 0.66859 0.0636*
H14C 0.75836 −0.12140 0.77800 0.0636*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0372 (9) 0.0570 (11) 0.0298 (8) −0.0070 (8) 0.0015 (7) 0.0075 (7)
O2 0.0341 (8) 0.0373 (9) 0.0468 (9) −0.0080 (7) −0.0086 (7) 0.0022 (8)
O3 0.0347 (8) 0.0346 (9) 0.0433 (9) −0.0031 (7) −0.0056 (7) 0.0066 (7)
N1 0.0238 (8) 0.0486 (12) 0.0369 (10) −0.0013 (8) 0.0001 (7) −0.0017 (8)
N2 0.0252 (9) 0.0448 (11) 0.0234 (8) −0.0053 (8) −0.0013 (7) 0.0011 (7)
N3 0.0233 (8) 0.0481 (11) 0.0253 (8) −0.0042 (8) −0.0021 (7) −0.0012 (8)
C1 0.0226 (9) 0.0371 (11) 0.0235 (9) −0.0011 (8) 0.0037 (8) −0.0041 (8)
C2 0.0317 (12) 0.0392 (12) 0.0366 (11) −0.0011 (9) 0.0042 (10) 0.0068 (10)
C3 0.0302 (12) 0.0441 (14) 0.0484 (13) −0.0087 (10) 0.0054 (10) 0.0025 (11)
C4 0.0258 (10) 0.0455 (13) 0.0316 (10) 0.0017 (9) 0.0011 (8) 0.0037 (9)
C5 0.0260 (10) 0.0387 (12) 0.0295 (10) −0.0028 (9) 0.0050 (8) −0.0021 (9)
C6 0.0242 (9) 0.0376 (12) 0.0240 (9) 0.0021 (8) 0.0027 (8) −0.0028 (8)
C7 0.0257 (10) 0.0421 (12) 0.0281 (10) −0.0004 (9) 0.0028 (8) 0.0005 (9)
C8 0.0230 (9) 0.0403 (12) 0.0269 (9) −0.0028 (9) 0.0055 (8) −0.0015 (9)
C9 0.0280 (10) 0.0311 (11) 0.0327 (10) −0.0059 (8) 0.0052 (8) 0.0006 (8)
C10 0.0258 (9) 0.0326 (11) 0.0291 (9) −0.0010 (8) 0.0048 (8) 0.0027 (8)
C11 0.0242 (9) 0.0343 (11) 0.0296 (10) −0.0037 (8) 0.0055 (8) −0.0018 (8)
C12 0.0323 (11) 0.0304 (11) 0.0358 (11) −0.0033 (9) 0.0087 (9) −0.0007 (9)
C13 0.0295 (11) 0.0387 (12) 0.0305 (10) 0.0035 (9) 0.0053 (9) 0.0039 (9)
C14 0.0352 (12) 0.0342 (12) 0.0485 (13) 0.0013 (10) 0.0105 (10) 0.0065 (10)

Geometric parameters (Å, °)

O1—C6 1.227 (3) C8—C13 1.382 (3)
O2—C11 1.349 (3) C8—C9 1.398 (3)
O3—C10 1.366 (3) C9—C10 1.385 (3)
O3—C14 1.425 (3) C10—C11 1.400 (3)
O2—H2B 0.8200 C11—C12 1.382 (3)
N1—C3 1.334 (3) C12—C13 1.386 (3)
N1—C4 1.327 (3) C2—H2 0.9300
N2—C6 1.334 (3) C3—H3 0.9300
N2—N3 1.396 (3) C4—H4 0.9300
N3—C7 1.264 (3) C5—H5 0.9300
N2—H2A 0.8600 C7—H7 0.9300
C1—C5 1.381 (3) C9—H9 0.9300
C1—C2 1.384 (3) C12—H12 0.9300
C1—C6 1.506 (3) C13—H13 0.9300
C2—C3 1.383 (4) C14—H14A 0.9600
C4—C5 1.386 (3) C14—H14B 0.9600
C7—C8 1.459 (3) C14—H14C 0.9600
C10—O3—C14 117.5 (2) O2—C11—C10 122.6 (2)
C11—O2—H2B 109.00 C10—C11—C12 119.5 (2)
C3—N1—C4 117.5 (2) C11—C12—C13 120.5 (2)
N3—N2—C6 118.82 (17) C8—C13—C12 120.5 (2)
N2—N3—C7 113.6 (2) C1—C2—H2 120.00
C6—N2—H2A 121.00 C3—C2—H2 120.00
N3—N2—H2A 121.00 N1—C3—H3 119.00
C2—C1—C5 118.3 (2) C2—C3—H3 119.00
C2—C1—C6 117.45 (19) N1—C4—H4 118.00
C5—C1—C6 124.2 (2) C5—C4—H4 118.00
C1—C2—C3 119.1 (2) C1—C5—H5 121.00
N1—C3—C2 123.0 (2) C4—C5—H5 121.00
N1—C4—C5 123.7 (2) N3—C7—H7 119.00
C1—C5—C4 118.5 (2) C8—C7—H7 119.00
O1—C6—N2 123.0 (2) C8—C9—H9 120.00
N2—C6—C1 116.85 (18) C10—C9—H9 120.00
O1—C6—C1 120.1 (2) C11—C12—H12 120.00
N3—C7—C8 121.9 (2) C13—C12—H12 120.00
C7—C8—C13 118.5 (2) C8—C13—H13 120.00
C7—C8—C9 122.0 (2) C12—C13—H13 120.00
C9—C8—C13 119.5 (2) O3—C14—H14A 109.00
C8—C9—C10 120.1 (2) O3—C14—H14B 109.00
O3—C10—C9 125.6 (2) O3—C14—H14C 109.00
O3—C10—C11 114.4 (2) H14A—C14—H14B 109.00
C9—C10—C11 120.0 (2) H14A—C14—H14C 109.00
O2—C11—C12 118.0 (2) H14B—C14—H14C 110.00
C14—O3—C10—C9 14.0 (4) N1—C4—C5—C1 −0.7 (4)
C14—O3—C10—C11 −165.5 (2) N3—C7—C8—C9 16.8 (4)
C4—N1—C3—C2 −0.6 (4) N3—C7—C8—C13 −162.1 (2)
C3—N1—C4—C5 1.3 (4) C7—C8—C9—C10 −178.3 (2)
C6—N2—N3—C7 −162.0 (2) C13—C8—C9—C10 0.6 (4)
N3—N2—C6—O1 1.4 (3) C7—C8—C13—C12 176.7 (2)
N3—N2—C6—C1 177.92 (19) C9—C8—C13—C12 −2.3 (4)
N2—N3—C7—C8 179.5 (2) C8—C9—C10—O3 −177.3 (2)
C5—C1—C2—C3 1.5 (4) C8—C9—C10—C11 2.2 (4)
C6—C1—C2—C3 178.3 (2) O3—C10—C11—O2 −3.1 (3)
C2—C1—C5—C4 −0.8 (3) O3—C10—C11—C12 176.2 (2)
C6—C1—C5—C4 −177.4 (2) C9—C10—C11—O2 177.4 (2)
C2—C1—C6—O1 −21.5 (3) C9—C10—C11—C12 −3.4 (4)
C2—C1—C6—N2 161.9 (2) O2—C11—C12—C13 −179.0 (2)
C5—C1—C6—O1 155.1 (2) C10—C11—C12—C13 1.7 (4)
C5—C1—C6—N2 −21.5 (3) C11—C12—C13—C8 1.1 (4)
C1—C2—C3—N1 −0.8 (4)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O2—H2B···O3 0.82 2.25 2.694 (2) 114
N2—H2A···O1i 0.86 2.25 3.089 (2) 164
O2—H2B···N1ii 0.82 1.96 2.703 (3) 150
C5—H5···O1i 0.93 2.55 3.410 (3) 153

Symmetry codes: (i) x, −y, z−1/2; (ii) x+1, −y, z+3/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5177).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl.34, 1555-1573.
  2. Bruker (2005). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  5. Farrugia, L. J. (1999). J. Appl. Cryst.32, 837–838.
  6. Liu, X. & Shi, X.-F. (2007). Acta Cryst. E63, o4807.
  7. Shafiq, Z., Yaqub, M., Tahir, M. N., Hussain, A. & Iqbal, M. S. (2009). Acta Cryst. E65, o2898. [DOI] [PMC free article] [PubMed]
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  9. Shi, X.-F., He, L., Ma, G.-Z. & Yuan, C.-C. (2007). Acta Cryst. E63, o1119–o1120.
  10. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044134/hb5177sup1.cif

e-65-o2899-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044134/hb5177Isup2.hkl

e-65-o2899-Isup2.hkl (77.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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