Abstract
The title compound, C13H9Cl2NO2·H2O, represents a Schiff base which adopts the phenol–imine tautomeric form in the solid state. The molecule is approximately planar (r.m.s. deviation 0.0818 Å), and the dihedral angle between the two aromatic rings is 7.46 (12)°. An O—H⋯N interaction generates an S(6) ring. In the crystal, molecules are linked by intermolecular O—H⋯O hydrogen bonds involving the solvent water molecule, forming chains.
Related literature
For the biological properties of Schiff bases see: Lozier et al. (1975 ▶), Dao et al. (2000 ▶). For the coordination chemistry of Schiff bases see: Kargar et al. (2009 ▶); Yeap et al. (2009 ▶). For a discussion of Schiff bases tautomerism, see: Şahin et al. (2005 ▶); Hadjoudis et al. (1987 ▶). For a related structure, see: Zhang (2009 ▶).
Experimental
Crystal data
C13H9Cl2NO2·H2O
M r = 300.13
Monoclinic,
a = 4.6899 (2) Å
b = 17.4289 (6) Å
c = 16.1645 (7) Å
β = 95.923 (3)°
V = 1314.23 (9) Å3
Z = 4
Mo Kα radiation
μ = 0.50 mm−1
T = 296 K
0.90 × 0.56 × 0.25 mm
Data collection
Stoe IPDS II diffractometer
Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.801, T max = 0.959
11982 measured reflections
2585 independent reflections
1879 reflections with I > 2σ(I)
R int = 0.050
Refinement
R[F 2 > 2σ(F 2)] = 0.037
wR(F 2) = 0.098
S = 0.97
2585 reflections
188 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.14 e Å−3
Δρmin = −0.29 e Å−3
Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045103/bh2254sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045103/bh2254Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O3—H1O⋯O2i | 0.85 (4) | 1.94 (4) | 2.774 (3) | 170 (3) |
| O2—H2⋯N1 | 0.87 (4) | 1.77 (3) | 2.569 (2) | 152 (3) |
| O3—H2O⋯O1ii | 0.82 (4) | 2.49 (5) | 3.184 (3) | 143 (4) |
| O1—H1⋯O3 | 0.87 (4) | 1.79 (4) | 2.659 (3) | 171 (3) |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors wish to acknowledge the Faculty of Arts and Sciences, Ondokuz Mayıs University, Turkey, for providing access to the Stoe IPDS II diffractometer (purchased under grant No. F279 of the University Research Fund).
supplementary crystallographic information
Comment
Schiff bases often exhibit various biological activities and in many cases were shown to have antibacterial, anticancer, anti-inflammatory and antitoxic properties (Lozier et al., 1975; Dao et al., 2000). Schiff bases have also been used as versatile ligands in coordination chemistry (Kargar et al., 2009; Yeap et al., 2009). There are two types of intramolecular hydrogen bonds in Schiff bases, which may be stabilized either in keto-amine (N—H···O hydrogen bond) (Şahin et al., 2005) or phenol-imine (N···H—O hydrogen bond) tautomeric forms (Hadjoudis et al., 1987). The present X-ray investigation shows that the title compound is a Schiff base and exists in the phenol-imine form in the solid-state.
An ORTEP-3 (Farrugia, 1997) plot and crystal packing of the molecule of the title compound are shown in Figs. 1 and 2, respectively. The molecule is approximately planar. The dihedral angle between the two aromatic rings is 7.46 (12)° and the C1—C7—N1—C8 torsion angle is 178.71 (16)°. All bond lengths are within normal values. An intramolecular O2—H2···N1 hydrogen bond (Table 1) is observed and this hydrogen bond produces S(6) ring. The O2···N1 separation of 2.569 (2) Å is comparable to those observed for analogous hydrogen bonds in 2-bromo-4-chloro-6-[(E)-p-tolylimino-methyl]phenol (Zhang, 2009). Molecules are linked into sheets by a combination of O—H···O hydrogen bonds (Table 1). The combination of O—H···O hydrogen bonds generates a chain of edge-fused R66(22) rings running parallel to the [100] direction (Fig. 2).
Experimental
The compound (E)-2-[(2,4-(dichloro)phenylimino)methyl]-4-hydroxyphenol monohydrate was prepared by refluxing a solution containing 2,5-dihydroxybenzaldehyde (0.03 g, 0.22 mmol) in ethanol (20 ml) and 2,4-dichloroaniline (0.035 g, 0.22 mmol) in ethanol (20 ml). The reaction mixture was stirred for 1 h under reflux. The crystals of the title hydrate suitable for X-ray analysis were obtained from ethanol by slow evaporation (yield 73%; m.p. 432–435 K).
Refinement
H atoms bonded to O atoms were located in a difference map and refined freely (distances given in Table 1). All other H atoms were placed in calculated positions and constrained to ride on their parent atoms, with C—H = 0.93 Å and Uiso(H)=1.2Ueq(Carrier C).
Figures
Fig. 1.

The molecular structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
Part of the crystal structure, showing the formation R66(22) rings. Hydrogen bonds are indicated by dashed lines. H atoms not involved in these interactions have been omitted for clarity.
Crystal data
| C13H9Cl2NO2·H2O | F(000) = 616 |
| Mr = 300.13 | Dx = 1.517 Mg m−3 |
| Monoclinic, P21/c | Melting point: 432 K |
| Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71069 Å |
| a = 4.6899 (2) Å | Cell parameters from 12355 reflections |
| b = 17.4289 (6) Å | θ = 1.3–27.2° |
| c = 16.1645 (7) Å | µ = 0.50 mm−1 |
| β = 95.923 (3)° | T = 296 K |
| V = 1314.23 (9) Å3 | Prism, brown |
| Z = 4 | 0.90 × 0.56 × 0.25 mm |
Data collection
| Stoe IPDS II diffractometer | 2585 independent reflections |
| Radiation source: fine-focus sealed tube | 1879 reflections with I > 2σ(I) |
| graphite | Rint = 0.050 |
| Detector resolution: 6.67 pixels mm-1 | θmax = 26.0°, θmin = 1.7° |
| ω scans | h = −5→5 |
| Absorption correction: integration (X-RED32; Stoe & Cie, 2002) | k = −21→21 |
| Tmin = 0.801, Tmax = 0.959 | l = −19→19 |
| 11982 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.098 | H atoms treated by a mixture of independent and constrained refinement |
| S = 0.97 | w = 1/[σ2(Fo2) + (0.0595P)2] where P = (Fo2 + 2Fc2)/3 |
| 2585 reflections | (Δ/σ)max = 0.001 |
| 188 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | −0.2010 (4) | 0.11322 (10) | 0.62421 (11) | 0.0455 (4) | |
| C2 | −0.3504 (4) | 0.09465 (12) | 0.54787 (12) | 0.0540 (5) | |
| H2A | −0.3024 | 0.0502 | 0.5207 | 0.065* | |
| C3 | −0.5665 (4) | 0.14033 (12) | 0.51181 (12) | 0.0556 (5) | |
| C4 | −0.6388 (4) | 0.20661 (11) | 0.55258 (13) | 0.0554 (5) | |
| H4 | −0.7851 | 0.2380 | 0.5287 | 0.066* | |
| C5 | −0.4951 (5) | 0.22589 (11) | 0.62805 (13) | 0.0573 (5) | |
| H5 | −0.5461 | 0.2702 | 0.6550 | 0.069* | |
| C6 | −0.2748 (4) | 0.18020 (11) | 0.66461 (12) | 0.0510 (4) | |
| C7 | 0.0230 (4) | 0.06279 (11) | 0.66080 (12) | 0.0485 (4) | |
| H7 | 0.0640 | 0.0180 | 0.6331 | 0.058* | |
| C8 | 0.3792 (4) | 0.03047 (10) | 0.76835 (11) | 0.0467 (4) | |
| C9 | 0.4933 (4) | 0.04822 (11) | 0.84932 (12) | 0.0512 (4) | |
| C10 | 0.7030 (4) | 0.00366 (12) | 0.89192 (13) | 0.0560 (5) | |
| H11 | 0.7748 | 0.0162 | 0.9460 | 0.067* | |
| C11 | 0.8040 (4) | −0.05934 (11) | 0.85325 (12) | 0.0518 (5) | |
| C12 | 0.7014 (4) | −0.07811 (11) | 0.77313 (12) | 0.0547 (5) | |
| H12 | 0.7737 | −0.1205 | 0.7473 | 0.066* | |
| C13 | 0.4907 (4) | −0.03366 (11) | 0.73152 (12) | 0.0522 (5) | |
| H13 | 0.4209 | −0.0467 | 0.6774 | 0.063* | |
| N1 | 0.1649 (3) | 0.07852 (9) | 0.73022 (9) | 0.0492 (4) | |
| O1 | −0.6995 (5) | 0.11940 (12) | 0.43607 (10) | 0.0909 (6) | |
| H1 | −0.848 (8) | 0.148 (2) | 0.420 (2) | 0.121 (12)* | |
| O2 | −0.1365 (4) | 0.20076 (10) | 0.73902 (10) | 0.0729 (5) | |
| H2 | −0.007 (7) | 0.166 (2) | 0.751 (2) | 0.105 (10)* | |
| O3 | −1.1524 (5) | 0.19928 (14) | 0.37204 (14) | 0.0930 (7) | |
| H1O | −1.167 (7) | 0.232 (2) | 0.333 (2) | 0.112 (11)* | |
| H2O | −1.317 (10) | 0.200 (3) | 0.385 (3) | 0.154 (17)* | |
| Cl1 | 1.06563 (11) | −0.11630 (3) | 0.90637 (4) | 0.06643 (18) | |
| Cl2 | 0.36487 (14) | 0.12696 (4) | 0.89962 (4) | 0.0773 (2) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0467 (10) | 0.0449 (9) | 0.0457 (10) | −0.0009 (8) | 0.0091 (8) | 0.0010 (7) |
| C2 | 0.0598 (12) | 0.0552 (10) | 0.0472 (10) | 0.0099 (9) | 0.0062 (9) | −0.0040 (9) |
| C3 | 0.0594 (12) | 0.0662 (12) | 0.0413 (10) | 0.0084 (10) | 0.0053 (9) | 0.0013 (9) |
| C4 | 0.0566 (11) | 0.0518 (11) | 0.0582 (12) | 0.0069 (9) | 0.0081 (10) | 0.0098 (9) |
| C5 | 0.0635 (12) | 0.0437 (10) | 0.0648 (13) | 0.0071 (9) | 0.0073 (10) | −0.0036 (9) |
| C6 | 0.0541 (11) | 0.0488 (10) | 0.0498 (10) | −0.0028 (9) | 0.0045 (9) | −0.0059 (8) |
| C7 | 0.0508 (10) | 0.0473 (10) | 0.0477 (10) | 0.0023 (8) | 0.0068 (9) | −0.0016 (8) |
| C8 | 0.0473 (10) | 0.0477 (10) | 0.0454 (10) | −0.0023 (8) | 0.0065 (8) | 0.0031 (8) |
| C9 | 0.0502 (10) | 0.0521 (10) | 0.0508 (11) | −0.0012 (8) | 0.0033 (9) | −0.0053 (8) |
| C10 | 0.0530 (12) | 0.0625 (12) | 0.0507 (11) | −0.0034 (9) | −0.0031 (9) | −0.0027 (9) |
| C11 | 0.0452 (10) | 0.0530 (10) | 0.0569 (12) | −0.0043 (8) | 0.0030 (9) | 0.0063 (8) |
| C12 | 0.0592 (12) | 0.0493 (10) | 0.0565 (12) | 0.0044 (9) | 0.0107 (10) | 0.0009 (9) |
| C13 | 0.0607 (11) | 0.0525 (11) | 0.0432 (10) | 0.0021 (9) | 0.0046 (9) | −0.0015 (8) |
| N1 | 0.0502 (8) | 0.0501 (9) | 0.0468 (9) | 0.0016 (7) | 0.0034 (7) | 0.0011 (7) |
| O1 | 0.0986 (13) | 0.1152 (15) | 0.0533 (9) | 0.0486 (12) | −0.0184 (9) | −0.0210 (9) |
| O2 | 0.0780 (11) | 0.0689 (10) | 0.0678 (10) | 0.0162 (9) | −0.0120 (8) | −0.0241 (8) |
| O3 | 0.0771 (13) | 0.1106 (15) | 0.0906 (14) | 0.0109 (11) | 0.0047 (11) | 0.0506 (12) |
| Cl1 | 0.0588 (3) | 0.0651 (3) | 0.0733 (4) | 0.0055 (2) | −0.0036 (3) | 0.0112 (2) |
| Cl2 | 0.0850 (4) | 0.0770 (4) | 0.0669 (4) | 0.0199 (3) | −0.0065 (3) | −0.0257 (3) |
Geometric parameters (Å, °)
| C1—C2 | 1.393 (3) | C8—C9 | 1.397 (3) |
| C1—C6 | 1.398 (3) | C8—N1 | 1.401 (2) |
| C1—C7 | 1.448 (3) | C9—C10 | 1.380 (3) |
| C2—C3 | 1.371 (3) | C9—Cl2 | 1.734 (2) |
| C2—H2A | 0.9300 | C10—C11 | 1.372 (3) |
| C3—O1 | 1.365 (3) | C10—H11 | 0.9300 |
| C3—C4 | 1.389 (3) | C11—C12 | 1.374 (3) |
| C4—C5 | 1.373 (3) | C11—Cl1 | 1.735 (2) |
| C4—H4 | 0.9300 | C12—C13 | 1.375 (3) |
| C5—C6 | 1.388 (3) | C12—H12 | 0.9300 |
| C5—H5 | 0.9300 | C13—H13 | 0.9300 |
| C6—O2 | 1.354 (2) | O1—H1 | 0.87 (4) |
| C7—N1 | 1.274 (2) | O2—H2 | 0.87 (4) |
| C7—H7 | 0.9300 | O3—H1O | 0.85 (4) |
| C8—C13 | 1.393 (3) | O3—H2O | 0.82 (4) |
| C2—C1—C6 | 118.80 (17) | C13—C8—N1 | 125.12 (17) |
| C2—C1—C7 | 119.88 (16) | C9—C8—N1 | 117.89 (16) |
| C6—C1—C7 | 121.32 (17) | C10—C9—C8 | 121.82 (18) |
| C3—C2—C1 | 121.61 (18) | C10—C9—Cl2 | 118.39 (16) |
| C3—C2—H2A | 119.2 | C8—C9—Cl2 | 119.78 (15) |
| C1—C2—H2A | 119.2 | C11—C10—C9 | 119.00 (19) |
| O1—C3—C2 | 118.39 (18) | C11—C10—H11 | 120.5 |
| O1—C3—C4 | 122.44 (19) | C9—C10—H11 | 120.5 |
| C2—C3—C4 | 119.16 (19) | C10—C11—C12 | 121.10 (19) |
| C5—C4—C3 | 120.22 (19) | C10—C11—Cl1 | 119.48 (16) |
| C5—C4—H4 | 119.9 | C12—C11—Cl1 | 119.42 (16) |
| C3—C4—H4 | 119.9 | C11—C12—C13 | 119.40 (18) |
| C4—C5—C6 | 120.91 (18) | C11—C12—H12 | 120.3 |
| C4—C5—H5 | 119.5 | C13—C12—H12 | 120.3 |
| C6—C5—H5 | 119.5 | C12—C13—C8 | 121.69 (18) |
| O2—C6—C5 | 119.58 (18) | C12—C13—H13 | 119.2 |
| O2—C6—C1 | 121.12 (18) | C8—C13—H13 | 119.2 |
| C5—C6—C1 | 119.30 (18) | C7—N1—C8 | 122.99 (16) |
| N1—C7—C1 | 121.34 (17) | C3—O1—H1 | 113 (2) |
| N1—C7—H7 | 119.3 | C6—O2—H2 | 106 (2) |
| C1—C7—H7 | 119.3 | H1O—O3—H2O | 100 (4) |
| C13—C8—C9 | 116.98 (18) | ||
| C6—C1—C2—C3 | 0.0 (3) | N1—C8—C9—C10 | 179.39 (17) |
| C7—C1—C2—C3 | 179.05 (17) | C13—C8—C9—Cl2 | −179.77 (14) |
| C1—C2—C3—O1 | 178.63 (19) | N1—C8—C9—Cl2 | 0.9 (2) |
| C1—C2—C3—C4 | −0.2 (3) | C8—C9—C10—C11 | 0.7 (3) |
| O1—C3—C4—C5 | −178.8 (2) | Cl2—C9—C10—C11 | 179.20 (15) |
| C2—C3—C4—C5 | 0.0 (3) | C9—C10—C11—C12 | 0.5 (3) |
| C3—C4—C5—C6 | 0.5 (3) | C9—C10—C11—Cl1 | −179.49 (14) |
| C4—C5—C6—O2 | 179.88 (19) | C10—C11—C12—C13 | −1.0 (3) |
| C4—C5—C6—C1 | −0.7 (3) | Cl1—C11—C12—C13 | 178.96 (15) |
| C2—C1—C6—O2 | 179.87 (18) | C11—C12—C13—C8 | 0.4 (3) |
| C7—C1—C6—O2 | 0.8 (3) | C9—C8—C13—C12 | 0.7 (3) |
| C2—C1—C6—C5 | 0.5 (3) | N1—C8—C13—C12 | −179.98 (17) |
| C7—C1—C6—C5 | −178.58 (18) | C1—C7—N1—C8 | 178.71 (16) |
| C2—C1—C7—N1 | 179.43 (17) | C13—C8—N1—C7 | 9.2 (3) |
| C6—C1—C7—N1 | −1.5 (3) | C9—C8—N1—C7 | −171.48 (17) |
| C13—C8—C9—C10 | −1.2 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O3—H1O···O2i | 0.85 (4) | 1.94 (4) | 2.774 (3) | 170 (3) |
| O2—H2···N1 | 0.87 (4) | 1.77 (3) | 2.569 (2) | 152 (3) |
| O3—H2O···O1ii | 0.82 (4) | 2.49 (5) | 3.184 (3) | 143 (4) |
| O1—H1···O3 | 0.87 (4) | 1.79 (4) | 2.659 (3) | 171 (3) |
Symmetry codes: (i) x−1, −y+1/2, z−1/2; (ii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BH2254).
References
- Dao, V.-T., Gaspard, C., Mayer, M., Werner, G. H., Nguyen, S. N. & Michelot, R. J. (2000). Eur. J. Med. Chem. 35, 805–813. [DOI] [PubMed]
- Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
- Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
- Hadjoudis, E., Vittorakis, M. & Moustakali-Mavridis, I. (1987). Tetrahedron, 43, 1345–1360.
- Kargar, H., Jamshidvand, A., Fun, H.-K. & Kia, R. (2009). Acta Cryst. E65, m403–m404. [DOI] [PMC free article] [PubMed]
- Lozier, R. H., Bogomolni, R. A. & Stoeckenius, W. (1975). Biophys. J. 15, 955–962. [DOI] [PMC free article] [PubMed]
- Şahin, O., Albayrak, C., Odabaşoğlu, M. & Büyükgüngör, O. (2005). Acta Cryst. E61, o2859–o2861. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Stoe & Cie (2002). X-RED and X-AREA. Stoe & Cie, Darmstadt, Germany.
- Yeap, C. S., Kia, R., Kargar, H. & Fun, H.-K. (2009). Acta Cryst. E65, m570–m571. [DOI] [PMC free article] [PubMed]
- Zhang, X. (2009). Acta Cryst. E65, o513. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045103/bh2254sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045103/bh2254Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

