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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Nov 28;65(Pt 12):o3230. doi: 10.1107/S1600536809051034

(E)-N′-(3,4-Dimethoxy­benzyl­idene)-2-(8-quinol­yloxy)acetohydrazide–methanol–water (1/1/1)

Zhan-Ling Ma a,*
PMCID: PMC2972133  PMID: 21578936

Abstract

In the title compound, C20H19N3O4·CH4O·H2O, the Schiff base mol­ecule is almost planar, with a dihedral angle of 1.2 (1)° between the benzene ring and the quinoline ring system. An intra­molecular N—H⋯O hydrogen bond generates an S(6) ring. In the crystal, the methanol and water solvent mol­ecules are linked to the Schiff base mol­ecule via N—H⋯O, O—H⋯O, O—H⋯N and O—H⋯(O,N) hydrogen bonds.

Related literature

For background to the applications of 8-hydroxy­quinoline and its derivatives, see: Bratzel et al. (1972); Karmakar et al. (2007); Pierre et al. (2003). For a Schiff base compound containing 2,5-dimethoxy­benzaldehyde, see: Wang et al. (2009). For bond-length data, see: Allen et al. (1987).graphic file with name e-65-o3230-scheme1.jpg

Experimental

Crystal data

  • C20H19N3O4·CH4O·H2O

  • M r = 415.44

  • Triclinic, Inline graphic

  • a = 8.807 (2) Å

  • b = 10.071 (3) Å

  • c = 13.121 (3) Å

  • α = 68.702 (4)°

  • β = 74.552 (3)°

  • γ = 82.458 (5)°

  • V = 1044.4 (4) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 295 K

  • 0.21 × 0.18 × 0.16 mm

Data collection

  • Siemens SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.980, T max = 0.985

  • 5612 measured reflections

  • 3676 independent reflections

  • 1571 reflections with I > 2σ(I)

  • R int = 0.035

Refinement

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.126

  • S = 1.01

  • 3676 reflections

  • 273 parameters

  • H-atom parameters constrained

  • Δρmax = 0.19 e Å−3

  • Δρmin = −0.17 e Å−3

Data collection: SMART (Siemens, 1996); cell refinement: SAINT (Siemens, 1996); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809051034/hb5253sup1.cif

e-65-o3230-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051034/hb5253Isup2.hkl

e-65-o3230-Isup2.hkl (180.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H8⋯O1 0.86 2.35 2.698 (3) 105
N2—H8⋯O5i 0.86 2.06 2.899 (3) 165
O6—H6⋯O2 0.82 1.98 2.756 (4) 156
O6—H6⋯N3 0.82 2.58 3.194 (4) 133
O5—H21⋯N1ii 0.85 2.00 2.834 (4) 168
O5—H22⋯O6iii 0.85 2.02 2.847 (4) 164

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

supplementary crystallographic information

Comment

8-Hydroxyquinoline and its derivatives have been used widely in analytical chemistry (Bratzel et al., 1972), coordination chemistry (Karmakar et al., 2007), pharmaceutical chemistry (Pierre et al., 2003) and many other topics. As part of our on going search for good extractants of metal ions or a biologically active material, the title compound was obtained in the reaction of quinolin-8-yloxyacetic acid hydrazide and 3,4-dimethoxybenzaldehyde.

The Schiff base molecule of the compound displays a trans configuration with respect to the C=N and C—N bonds(Fig. 1). All the bond lengths are within normal(Allen et al., 1987), and are comparable to those in the related compound (E)-N'-(2,5-Dimethoxybenzylidene)-2-(8- quinolyloxy)acetohydrazide methanol solvate (Wang et al., 2009). The molecule is nearly planar, with a dihedral angle of the benzene ring and the quinoline ring is 1.2 (1)°. The methanol and water solvate molecules are linked to the host via N—H···O, O—H···O and O—H···N hydrogen bonds(Table 1).

Experimental

3,4-Dimethoxybenzaldehyde (0.1 mmol, 16.6 mg) and 2-(quinolin-8-yloxy) acetohydrazide (2.18 g, 10 mmol), were dissolved in a 95% ethanol solution (10 ml). The mixture was stirred at room temperature to give a clear colorless solution. Colourless blocks of (I) were formed by gradual evaporation of the solvent over a period of six days at room temperature.

Refinement

All H atoms were initially located in a difference Fourier map. C-bound H atoms were constrained to an ideal geometry, with C—H = 0.93–0.97 Å, O—H = 0.82–0.85 Å and N—H = 0.86 Å. Uiso(H) = 1.2Ueq(C,N), and 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with displacement ellipsoids drawn at the 30% probability level. The dashed lines indicate hydrogen bonds.

Crystal data

C20H19N3O4·CH4O·H2O Z = 2
Mr = 415.44 F(000) = 440
Triclinic, P1 Dx = 1.321 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 8.807 (2) Å Cell parameters from 583 reflections
b = 10.071 (3) Å θ = 2.6–22.5°
c = 13.121 (3) Å µ = 0.10 mm1
α = 68.702 (4)° T = 295 K
β = 74.552 (3)° Block, colourless
γ = 82.458 (5)° 0.21 × 0.18 × 0.16 mm
V = 1044.4 (4) Å3

Data collection

Siemens SMART CCD diffractometer 3676 independent reflections
Radiation source: fine-focus sealed tube 1571 reflections with I > 2σ(I)
graphite Rint = 0.035
φ and ω scans θmax = 25.1°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −10→10
Tmin = 0.980, Tmax = 0.985 k = −10→11
5612 measured reflections l = −15→15

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052 H-atom parameters constrained
wR(F2) = 0.126 w = 1/[σ2(Fo2) + (0.0363P)2 + 0.0145P] where P = (Fo2 + 2Fc2)/3
S = 1.00 (Δ/σ)max < 0.001
3676 reflections Δρmax = 0.19 e Å3
273 parameters Δρmin = −0.16 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0063 (11)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.9264 (2) 0.2984 (2) 1.08007 (16) 0.0553 (6)
O2 0.7983 (3) 0.3641 (2) 0.83136 (18) 0.0739 (7)
O3 0.3497 (2) 0.9140 (2) 0.60039 (16) 0.0594 (6)
O4 0.2433 (3) 1.1261 (2) 0.66550 (17) 0.0672 (7)
O5 0.7438 (3) 0.5521 (2) 0.15037 (15) 0.0700 (7)
H21 0.7970 0.4803 0.1834 0.105*
H22 0.6479 0.5351 0.1841 0.105*
O6 0.5689 (3) 0.4737 (3) 0.7121 (2) 0.0931 (9)
H6 0.6306 0.4628 0.7519 0.140*
N1 0.9468 (3) 0.3418 (3) 1.2638 (2) 0.0573 (8)
N2 0.7469 (3) 0.4881 (3) 0.95154 (19) 0.0507 (7)
H8 0.7600 0.4950 1.0121 0.061*
N3 0.6533 (3) 0.5866 (3) 0.88784 (19) 0.0517 (7)
C1 0.9595 (4) 0.3630 (4) 1.3543 (3) 0.0787 (12)
H1 0.9108 0.4449 1.3675 0.094*
C2 1.0419 (5) 0.2701 (4) 1.4323 (3) 0.0831 (12)
H2 1.0470 0.2908 1.4948 0.100*
C3 1.1133 (4) 0.1508 (4) 1.4153 (3) 0.0739 (11)
H3 1.1686 0.0883 1.4660 0.089*
C4 1.1039 (4) 0.1214 (4) 1.3206 (3) 0.0542 (9)
C5 1.1758 (4) −0.0007 (4) 1.2967 (3) 0.0676 (10)
H5 1.2304 −0.0675 1.3459 0.081*
C6 1.1660 (4) −0.0212 (4) 1.2027 (3) 0.0737 (11)
H6A 1.2138 −0.1023 1.1878 0.088*
C7 1.0845 (4) 0.0785 (4) 1.1268 (3) 0.0627 (10)
H7 1.0804 0.0636 1.0617 0.075*
C8 1.0114 (4) 0.1970 (3) 1.1484 (3) 0.0506 (8)
C9 1.0192 (3) 0.2217 (3) 1.2462 (2) 0.0487 (8)
C10 0.9210 (4) 0.2751 (3) 0.9812 (2) 0.0556 (9)
H10A 0.8837 0.1802 1.0017 0.067*
H10B 1.0269 0.2788 0.9338 0.067*
C11 0.8163 (4) 0.3817 (4) 0.9153 (3) 0.0541 (9)
C12 0.5916 (4) 0.6888 (3) 0.9221 (2) 0.0531 (9)
H12 0.6081 0.6919 0.9883 0.064*
C13 0.4960 (4) 0.8004 (3) 0.8595 (2) 0.0481 (8)
C14 0.4684 (3) 0.7989 (3) 0.7596 (2) 0.0469 (8)
H14 0.5083 0.7229 0.7348 0.056*
C15 0.3838 (4) 0.9073 (3) 0.6981 (2) 0.0486 (8)
C16 0.3235 (4) 1.0225 (3) 0.7344 (3) 0.0520 (9)
C17 0.3500 (4) 1.0262 (3) 0.8314 (3) 0.0613 (10)
H17 0.3111 1.1031 0.8553 0.074*
C18 0.4354 (4) 0.9145 (4) 0.8945 (3) 0.0590 (9)
H18 0.4517 0.9170 0.9610 0.071*
C19 0.4215 (4) 0.8044 (3) 0.5551 (2) 0.0688 (11)
H19A 0.5339 0.8039 0.5433 0.103*
H19B 0.3950 0.8226 0.4847 0.103*
H19C 0.3836 0.7134 0.6071 0.103*
C20 0.1775 (5) 1.2441 (4) 0.6990 (3) 0.0983 (14)
H20A 0.0973 1.2123 0.7675 0.147*
H20B 0.1319 1.3124 0.6411 0.147*
H20C 0.2586 1.2877 0.7111 0.147*
C21 0.6316 (5) 0.4092 (5) 0.6337 (3) 0.1262 (19)
H21A 0.7383 0.4372 0.5979 0.189*
H21B 0.5703 0.4378 0.5781 0.189*
H21C 0.6301 0.3076 0.6700 0.189*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0614 (15) 0.0611 (15) 0.0474 (12) 0.0089 (12) −0.0221 (12) −0.0206 (11)
O2 0.092 (2) 0.0846 (18) 0.0659 (15) 0.0131 (14) −0.0410 (14) −0.0398 (14)
O3 0.0733 (17) 0.0556 (14) 0.0531 (14) 0.0098 (12) −0.0224 (12) −0.0219 (11)
O4 0.0853 (18) 0.0579 (15) 0.0612 (14) 0.0245 (13) −0.0244 (13) −0.0280 (12)
O5 0.0792 (17) 0.0696 (16) 0.0639 (14) 0.0069 (13) −0.0289 (13) −0.0207 (12)
O6 0.089 (2) 0.124 (2) 0.095 (2) 0.0277 (17) −0.0455 (16) −0.0652 (18)
N1 0.065 (2) 0.0573 (19) 0.0494 (17) 0.0004 (15) −0.0156 (15) −0.0175 (14)
N2 0.0532 (18) 0.0560 (18) 0.0441 (15) 0.0010 (15) −0.0155 (14) −0.0167 (14)
N3 0.0538 (18) 0.0518 (17) 0.0472 (16) −0.0010 (15) −0.0170 (14) −0.0110 (14)
C1 0.100 (3) 0.078 (3) 0.067 (2) 0.013 (2) −0.032 (2) −0.032 (2)
C2 0.109 (3) 0.093 (3) 0.056 (2) 0.006 (3) −0.041 (2) −0.024 (2)
C3 0.072 (3) 0.075 (3) 0.069 (3) −0.006 (2) −0.032 (2) −0.008 (2)
C4 0.048 (2) 0.061 (2) 0.048 (2) −0.0069 (19) −0.0186 (18) −0.0063 (18)
C5 0.057 (2) 0.062 (3) 0.078 (3) 0.007 (2) −0.028 (2) −0.011 (2)
C6 0.076 (3) 0.064 (3) 0.087 (3) 0.018 (2) −0.032 (2) −0.032 (2)
C7 0.062 (2) 0.062 (2) 0.066 (2) 0.007 (2) −0.022 (2) −0.023 (2)
C8 0.043 (2) 0.058 (2) 0.049 (2) −0.0002 (18) −0.0127 (17) −0.0151 (18)
C9 0.039 (2) 0.052 (2) 0.049 (2) −0.0065 (17) −0.0088 (17) −0.0100 (17)
C10 0.057 (2) 0.059 (2) 0.057 (2) 0.0000 (18) −0.0172 (18) −0.0246 (17)
C11 0.055 (2) 0.058 (2) 0.050 (2) −0.0028 (19) −0.0158 (18) −0.0168 (18)
C12 0.056 (2) 0.056 (2) 0.047 (2) −0.0072 (19) −0.0125 (18) −0.0154 (18)
C13 0.050 (2) 0.048 (2) 0.0437 (19) −0.0044 (17) −0.0084 (17) −0.0136 (16)
C14 0.051 (2) 0.045 (2) 0.0432 (19) −0.0037 (17) −0.0080 (17) −0.0161 (16)
C15 0.050 (2) 0.053 (2) 0.0426 (19) −0.0046 (17) −0.0089 (17) −0.0161 (17)
C16 0.053 (2) 0.052 (2) 0.046 (2) 0.0033 (18) −0.0085 (17) −0.0154 (17)
C17 0.068 (3) 0.058 (2) 0.059 (2) 0.006 (2) −0.013 (2) −0.0263 (19)
C18 0.069 (3) 0.065 (2) 0.049 (2) −0.002 (2) −0.0169 (19) −0.0246 (19)
C19 0.091 (3) 0.067 (2) 0.061 (2) 0.014 (2) −0.028 (2) −0.036 (2)
C20 0.145 (4) 0.072 (3) 0.105 (3) 0.045 (3) −0.066 (3) −0.053 (2)
C21 0.136 (4) 0.169 (5) 0.117 (4) 0.050 (4) −0.056 (3) −0.100 (4)

Geometric parameters (Å, °)

O1—C8 1.378 (3) C6—H6A 0.9300
O1—C10 1.413 (3) C7—C8 1.366 (4)
O2—C11 1.230 (3) C7—H7 0.9300
O3—C15 1.369 (3) C8—C9 1.413 (4)
O3—C19 1.437 (3) C10—C11 1.497 (4)
O4—C16 1.366 (3) C10—H10A 0.9700
O4—C20 1.416 (3) C10—H10B 0.9700
O5—H21 0.8500 C12—C13 1.448 (4)
O5—H22 0.8499 C12—H12 0.9300
O6—C21 1.369 (4) C13—C18 1.382 (4)
O6—H6 0.8200 C13—C14 1.401 (4)
N1—C1 1.315 (4) C14—C15 1.366 (4)
N1—C9 1.359 (3) C14—H14 0.9300
N2—C11 1.339 (3) C15—C16 1.400 (4)
N2—N3 1.383 (3) C16—C17 1.368 (4)
N2—H8 0.8600 C17—C18 1.397 (4)
N3—C12 1.271 (3) C17—H17 0.9300
C1—C2 1.403 (5) C18—H18 0.9300
C1—H1 0.9300 C19—H19A 0.9600
C2—C3 1.346 (4) C19—H19B 0.9600
C2—H2 0.9300 C19—H19C 0.9600
C3—C4 1.403 (4) C20—H20A 0.9600
C3—H3 0.9300 C20—H20B 0.9600
C4—C5 1.408 (4) C20—H20C 0.9600
C4—C9 1.415 (4) C21—H21A 0.9600
C5—C6 1.347 (4) C21—H21B 0.9600
C5—H5 0.9300 C21—H21C 0.9600
C6—C7 1.407 (4)
C8—O1—C10 115.6 (2) O2—C11—N2 124.2 (3)
C15—O3—C19 116.5 (2) O2—C11—C10 117.2 (3)
C16—O4—C20 117.6 (2) N2—C11—C10 118.7 (3)
H21—O5—H22 105.8 N3—C12—C13 120.9 (3)
C21—O6—H6 109.5 N3—C12—H12 119.5
C1—N1—C9 116.9 (3) C13—C12—H12 119.5
C11—N2—N3 117.4 (3) C18—C13—C14 118.3 (3)
C11—N2—H8 121.3 C18—C13—C12 120.5 (3)
N3—N2—H8 121.3 C14—C13—C12 121.1 (3)
C12—N3—N2 116.4 (3) C15—C14—C13 121.0 (3)
N1—C1—C2 124.2 (3) C15—C14—H14 119.5
N1—C1—H1 117.9 C13—C14—H14 119.5
C2—C1—H1 117.9 C14—C15—O3 125.0 (3)
C3—C2—C1 119.1 (3) C14—C15—C16 120.1 (3)
C3—C2—H2 120.4 O3—C15—C16 114.9 (3)
C1—C2—H2 120.4 O4—C16—C17 125.0 (3)
C2—C3—C4 119.6 (3) O4—C16—C15 115.2 (3)
C2—C3—H3 120.2 C17—C16—C15 119.8 (3)
C4—C3—H3 120.2 C16—C17—C18 120.0 (3)
C3—C4—C5 123.1 (3) C16—C17—H17 120.0
C3—C4—C9 117.3 (3) C18—C17—H17 120.0
C5—C4—C9 119.6 (3) C13—C18—C17 120.8 (3)
C6—C5—C4 120.3 (3) C13—C18—H18 119.6
C6—C5—H5 119.9 C17—C18—H18 119.6
C4—C5—H5 119.9 O3—C19—H19A 109.5
C5—C6—C7 120.9 (3) O3—C19—H19B 109.5
C5—C6—H6A 119.5 H19A—C19—H19B 109.5
C7—C6—H6A 119.5 O3—C19—H19C 109.5
C8—C7—C6 120.3 (3) H19A—C19—H19C 109.5
C8—C7—H7 119.9 H19B—C19—H19C 109.5
C6—C7—H7 119.9 O4—C20—H20A 109.5
C7—C8—O1 124.2 (3) O4—C20—H20B 109.5
C7—C8—C9 120.2 (3) H20A—C20—H20B 109.5
O1—C8—C9 115.6 (3) O4—C20—H20C 109.5
N1—C9—C8 118.5 (3) H20A—C20—H20C 109.5
N1—C9—C4 122.9 (3) H20B—C20—H20C 109.5
C8—C9—C4 118.6 (3) O6—C21—H21A 109.5
O1—C10—C11 113.2 (3) O6—C21—H21B 109.5
O1—C10—H10A 108.9 H21A—C21—H21B 109.5
C11—C10—H10A 108.9 O6—C21—H21C 109.5
O1—C10—H10B 108.9 H21A—C21—H21C 109.5
C11—C10—H10B 108.9 H21B—C21—H21C 109.5
H10A—C10—H10B 107.8

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H8···O1 0.86 2.35 2.698 (3) 105
N2—H8···O5i 0.86 2.06 2.899 (3) 165
O6—H6···O2 0.82 1.98 2.756 (4) 156
O6—H6···N3 0.82 2.58 3.194 (4) 133
O5—H21···N1ii 0.85 2.00 2.834 (4) 168
O5—H22···O6iii 0.85 2.02 2.847 (4) 164

Symmetry codes: (i) x, y, z+1; (ii) x, y, z−1; (iii) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB5253).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Bratzel, M. P., Aaron, J. J., Winefordner, J. D., Schulman, S. G. & Gershon, H. (1972). Anal. Chem. 44, 1240–1245.
  3. Karmakar, A., Sarma, R. J. & Baruah, J. B. (2007). CrystEngComm, 9, 379–389.
  4. Pierre, J.-L., Baret, P. & Serratrice, G. (2003). Curr. Med. Chem. 10, 1077–1084. [DOI] [PubMed]
  5. Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Siemens (1996). SMART and SAINT. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.
  8. Wang, S.-Y., Yuan, L., Xu, L., Zhang, Z., Diao, Y.-P. & Lv, D.-C. (2009). Acta Cryst. E65, o1154. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809051034/hb5253sup1.cif

e-65-o3230-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051034/hb5253Isup2.hkl

e-65-o3230-Isup2.hkl (180.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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