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. 2010 Nov;186(3):1013–1028. doi: 10.1534/genetics.110.120493

TABLE 5.

Schemes used for validation of prediction equations

Scheme Deviation from basic schemea
Alt. 1 Inline graphic = Inline graphic = 0.7
Alt. 2 Inline graphic = Inline graphic = −0.7
Alt. 3 Inline graphic = 0.7, Inline graphic = −0.7
Alt. 4 Inline graphic = −0.7, Inline graphic = 0.7
Alt. 5 Inline graphic = 0.7
Alt. 6 Inline graphic = 0.7
Alt. 7 Inline graphic = −0.7
Alt. 8 Inline graphic = −0.7
Alt. 9 nw = 2, ng = 2,500, Inline graphic, T = 2450
Alt. 10 nw = 10, ng = 500, Inline graphic
Alt. 11 Inline graphic = 0.1
Alt. 12 Inline graphic = 0.5
Alt. 13 Inline graphic
Alt. 14 Inline graphic = 1
Alt. 15 N = 20, n = 250
Alt. 16 N = 100, n = 50
Alt. 17 n = 40, T = 2,000
Alt. 18 n = 200, T = 10,000
Alt. 19 N = 100, n = 10, T = 1,000
Alt. 20 N = 200, n = 10, T = 2,000
a

Basic scheme: N = 50 families, n = 100 members per family, so that T = 5000; nw = 4 individuals per group, so that ng = 1250 groups; Inline graphic = 1, Inline graphic, Inline graphic = 0.3, Inline graphic = 0.3, Inline graphic = Inline graphic = 0. For schemes with groups composed of two families, T was adjusted when needed to obtain an integer number of blocks.