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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Apr 8;65(Pt 5):o970–o971. doi: 10.1107/S160053680901160X

4-(3-Methyl­anilino)-N-[N-(1-methyl­ethyl)carbamo­yl]pyridinium-3-sulfon­amidate (torasemide) methanol 0.25-solvate 0.25-hydrate

Gianluca Bartolucci a, Bruno Bruni a, Silvia A Coran a, Massimo Di Vaira b,*
PMCID: PMC2977669  PMID: 21584012

Abstract

The title compound, C16H20N4O3S·0.25CH4O·0.25H2O, is a hydrate/methanol solvate of torasemide, a diuretic drug used in the treatment of hypertension. The asymmetric unit contains two torasemide mol­ecules and half-occupied methanol and water mol­ecules. It is isomorphous with the previously reported nonsolvated T–II form of torasemide. The water mol­ecules contribute to the stability of the structure by participating in an extensive system of O—H⋯O hydrogen bonds; N—H⋯N and N—H⋯O hydrogen bonds are also present. Both asymmetric mol­ecules of torasemide form inversion dimers in the crystal.

Related literature

For background on the medicinal properties and polymorphism of torasemide, see: Uchida et al. (1991); Broekhuysen et al. (1986); Ghys et al. (1985); Ishido & Senzaki (2008); Cosin & Diez (2002); Murray et al. (2001); Dupont et al. (1978); Danilovski et al. (2001).graphic file with name e-65-0o970-scheme1.jpg

Experimental

Crystal data

  • C16H20N4O3S·0.25CH4O·0.25H2O

  • M r = 360.94

  • Monoclinic, Inline graphic

  • a = 16.8477 (2) Å

  • b = 11.5951 (1) Å

  • c = 20.3256 (2) Å

  • β = 108.646 (1)°

  • V = 3762.21 (7) Å3

  • Z = 8

  • Cu Kα radiation

  • μ = 1.74 mm−1

  • T = 200 K

  • 0.45 × 0.38 × 0.12 mm

Data collection

  • Oxford Diffraction Xcalibur PX Ultra CCD diffractometer

  • Absorption correction: multi-scan (ABSPACK; Oxford Diffraction, 2006) T min = 0.502, T max = 1.000 (expected range = 0.407–0.811)

  • 50677 measured reflections

  • 7402 independent reflections

  • 6976 reflections with I > 2σ(I)

  • R int = 0.031

Refinement

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.156

  • S = 1.04

  • 7402 reflections

  • 496 parameters

  • 6 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.95 e Å−3

  • Δρmin = −0.57 e Å−3

Data collection: CrysAlisPro CCD (Oxford Diffraction, 2006); cell refinement: CrysAlisPro CCD; data reduction: CrysAlisPro RED (Oxford Diffraction, 2006); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008), WinGX (Farrugia, 1999) and PARST (Nardelli, 1995).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901160X/hb2934sup1.cif

e-65-0o970-sup1.cif (31.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680901160X/hb2934Isup2.hkl

e-65-0o970-Isup2.hkl (354.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1N⋯N3 0.83 (3) 2.37 (3) 2.986 (2) 131 (2)
N1—H1N⋯N3i 0.83 (3) 2.38 (3) 3.060 (2) 139 (2)
N2—H2N⋯O5ii 0.84 (3) 2.14 (3) 2.847 (2) 142 (3)
N2—H2N⋯O6ii 0.84 (3) 2.21 (3) 2.822 (2) 130 (2)
N4—H4N⋯O1i 0.90 (3) 2.02 (3) 2.919 (2) 174 (3)
N5—H5N⋯N7 0.86 (3) 2.21 (3) 2.910 (2) 138 (2)
N5—H5N⋯N7iii 0.86 (3) 2.47 (3) 3.098 (2) 130 (2)
N6—H6N⋯O2iv 0.92 (3) 2.53 (3) 3.036 (2) 115 (2)
N6—H6N⋯O3iv 0.92 (3) 1.79 (3) 2.667 (2) 158 (2)
N8—H8N⋯O4iii 0.85 (3) 2.21 (3) 3.034 (3) 164 (3)
O7—H7O⋯O8 0.923 (8) 1.70 (5) 2.480 (8) 140 (7)
O7—H7O⋯O8v 0.923 (8) 2.50 (10) 2.995 (9) 114 (8)
O8—H82O⋯O6 0.75 (5) 2.00 (6) 2.735 (5) 166 (11)
O8—H81O⋯O6v 0.75 (5) 2.02 (6) 2.721 (5) 158 (12)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic.

Acknowledgments

The authors acknowledge financial support from the Italian Ministero dell’Istruzione, dell’Universitá e della Ricerca.

supplementary crystallographic information

Comment

Torasemide has been developed as a longlasting loop diuretic that combines the effects of both furosemide and spironolactone (Uchida et al., 1991; Broekhuysen et al., 1986; Ghys et al., 1985). It is used in the treatment of hypertension and of edema associated with congestive heart failure (Ishido & Senzaki, 2008). Torasemide has been reported to be more effective than furosemide in chronic heart failure, with a lower mortality (Cosin & Diez, 2002; Murray et al., 2001).

Three polymorphic forms have been reported up to now for torasemide, denoted T–I, T–II (Dupont et al., 1978) and T–N (Danilovski et al., 2001). We have obtained crystals of a solvate (I) which, besides being isomorphous with form T–II (with the a and c unit cell axes interchanged), contains water and methanol molecules interspersed in the lattice. The solvate molecules are disorderly arranged in proximity of a twofold rotation axis and one molecule of each type resides, with 0.50 occupancy, in the asymmetric unit of the monoclinic unit cell which comprises, in addition, two independent torasemide molecules (Fig. 1), as found for form T–II. Although data collection for I was carried out at a temperature of 200 K, only a 0.8% decrease in the cell volume was found with respect to the room–temperature value of T–II; this might be ascribed in part to the presence of the additional solvate molecules in the lattice of I. The 200 K data collection temperature represented a compromise between conditions of high thermal motion at room temperature, particularly affecting the terminal methyl groups of the chain, and crystal deterioration at lower temperatures. The conformations of the two independent molecules in the structure of I (respectively formed by carbon atoms C1 to C16 and C17 to C32, hereafter referred to as molecules A and B, in the above order, for consistency with previous notation) are similar to those of the A and B molecules of the T–II form, with an 8.4° largest difference in the value of the C22—N8—C23—C24 torsion angle (this corresponds to the C6—N4—C7—C9 chain of molecule B of the T–II form, according to Dupont's notation for the non–solvated form). The present values of the dihedral angles between the best planes through the phenyl and pyridyl rings in the two molecules, of 61.18 (7)° (A) and 78.71 (7)° (B), match those reported (61.2° and 79.1°) for the corresponding molecules of form T—II.

It should be noted that the present set of data, contrary to the older one for T–II, has allowed to assign unambiguously and refine the positions of all hydrogen atoms attached to the N atoms in the two molecules. In particular, the N—H amine bond formed by N1 in molecule A and by N5 in B, is almost parallel, in each case, to the plane of the pyridyl ring, yielding a substantially planar immediate environment of the nitrogen atom, whereas such bond is considerably displaced from the plane of the phenyl ring. This may rationalize the large difference, ca 0.09 Å, between the lengths of the two N—C bonds formed by N1 and, respectively, N5 in the two molecules. Indeed, as a consequence of the above N—H bond orientations, the nitrogen lone pair may favourably interact with antibonding orbitals of the pyridyl ring, but not with those of the phenyl ring, yielding shorter N1—C1 and N5—C17 bonds compared to the N1—C10 and N5—C26 ones (with the additional consequence that the two contiguous C—C bonds in each pyridyl ring are the longest of all bonds in the present rings).

The crystal structure is stabilized by an extensive system of hydrogen bonds (Table 1), several of these in bifurcated mode. There are centrosymmetric dimers of molecule A, internally connnected by the N1···N3 (N1···N3 = 2.986 (2) Å, N1—H1N···N3 = 131 (2)°), N1···N3i (N1···N3i = 3.060 (2) Å, N1—H1N···N3i = 139 (2)°; symmetry code (i): - x, 1 - y, - z) and N4···O1i (N4···O1i = 2.919 (2) Å, N4—H4N···O1i = 174 (3)°) hydrogen bonds and centrosymmetric dimers of molecule B, linked by the N5···N7 (N5···N7 = 2.910 (2) Å, N5—H5N···N7 = 138 (2)°), N5···N7iii (N5···N7iii = 3.098 (2) Å, N5—H5N···N7iii = 130 (2)°; symmetry code (iii): 1 - x, - y, - z) and N8···O4iii (N8···O4iii = 3.034 (3) Å, N8—H8N···O4iii = 164 (3)° hydrogen bonds. Dimers of the above two types, connected through the N2···O5ii (N2···O5ii = 2.847 (2) Å, N2—H2N···O5ii = 142 (3)°; symmetry code (ii): 1 - x, 1 - y, - z) and N2···O6ii (N2···O6ii = 2.822 (2) Å, N2—H2N···O6ii = 130 (2)°) hydrogen bonds, form chains in an AABBAA fashion, which are stacked, with no intervening hydrogen bonds among them, on planes parallel to the ab cell face (Fig. 2). On contiguous planes of this set, spaced by c/2 intervals, the chains are alternatively parallel to the [110] and [1–10] directions. Furthermore, a three–dimensional network arises since dimeric groups from the above adjacent planes are connected through the N6···O2iv (N6···O2iv = 3.036 (2) Å, N6—H6N···O2iv = 115 (2)°; symmetry code (iv): 1/2 + x, 1 - y, 1/2 + z) and N6···O3iv (N6···O3iv = 2.667 (2) Å, N6—H6N···O3iv = 158 (2)°) linkages. Also the latter system of connections gives rise to planar arrays of AABBAA chains, these being parallel to the bc cell face (Fig. 3). Also in this case, there are alternative [01–1] and [011] chain orientations on adjacent planes, at a/2 intervals. It is remarkable that a similar arrangement (with one exception, see the accompanying paper) is found for the structure of the T–N polymorph, in spite of quite different cell settings. The (disordered) water molecule bridges between the chains (Fig. 4), through the O8···O6 (O8···O6 = 2.735 (5) Å, O8—H82O···O6 = 166 (11)°) and O8···O6v (O8···O6v = 2.721 (5) Å, O8—H81O···O6v = 158 (12)°; symmetry code (v): 3/2 - x, y, 1/2 - z) hydrogen bonds and each water fraction accepts one such bond, O7···O8 (O7···O8 = 2.480 (8) Å, O7—H7O···O8 = 140 (7)°), from the closest fraction of the methanol molecule.

Experimental

Samples of torasemide were kindly provided by SIMS (SIMS srl, Reggello Firenze, Italy). Crystals of (I), in the form of colourless prisms suitable for X-ray diffraction analysis, were obtained by slow evaporation from 2:1 methanol:butanol solutions. The presence of a small amount of water molecules in the structure may be rationalized considering that the operations were not performed in completely anhydrous conditions.

Refinement

H atoms bound to carbon atoms were in geometrically generated positions, riding. The coordinates of those bound to the N atoms of the torasemide molecules were refined freely, whereas those of H atoms of the solvent molecules were refined with geometric restraints. The constraint U(H) = 1.2Ueq(C,N) on hydrogen temperature factors was applied [U(H) = 1.5Ueq(C) for the H atoms of methyl groups and solvate molecules]. The N—H bond distances formed by refined hydrogen atoms were in the range 0.835 – 0.917 Å, the H2O O—H bonds refined to 0.75 (5) Å and the methanol O—H to 0.923 (8) Å.

Figures

Fig. 1.

Fig. 1.

A view of the content of the asymmetric unit of (I), where the sites of the solvate water and methanol molecules have 0.50 occupancy. Displacement ellipsoids are drawn at the 50% probability level.

Fig. 2.

Fig. 2.

A view of the crystal packing in the structure of (I), in proximity of the ab face. Hydrogen bonds are denoted by dashed lines. Only hydrogen atoms involved in the formation of hydrogen bonds are shown. Chains of hydrogen–bonded molecules, parallel to the [110] direction, are formed by centrosymmetric dimers of the two types of symmetry–independent molecules (denoted by the A and B letters, respectively). The solvent molecules, not shown in this drawing, lie between this layer and the parallel one at c = 1/2, where the chains of hydrogen–bonded molecules exhibit the alternative [1–10] orientation.

Fig. 3.

Fig. 3.

The arrangement of chains, parallel to the [01–1] direction, of hydrogen–bonded molecules in proximity of the bc face. A similar arrangement, however with the alternative [011] chain orientation, exists on the parallel flanking planes at a/2 distance from the one shown.

Fig. 4.

Fig. 4.

A view of the packing in the structure of (I) showing channels hosting the solvent molecules. Dimers of A or B molecules aligned along b, according to this view, are not connected by hydrogen bonds.

Crystal data

C16H20N4O3S·0.25CH4O·0.25H2O F(000) = 1528
Mr = 360.94 Dx = 1.274 Mg m3
Monoclinic, P2/n Cu Kα radiation, λ = 1.54180 Å
Hall symbol: -P 2yac Cell parameters from 37208 reflections
a = 16.8477 (2) Å θ = 4.1–72.4°
b = 11.5951 (1) Å µ = 1.74 mm1
c = 20.3256 (2) Å T = 200 K
β = 108.646 (1)° Prism, colorless
V = 3762.21 (7) Å3 0.45 × 0.38 × 0.12 mm
Z = 8

Data collection

Oxford Diffraction Xcalibur PX Ultra CCD diffractometer 7402 independent reflections
Radiation source: fine-focus sealed tube 6976 reflections with I > 2σ(I)
Oxford Diffraction Enhance ULTRA assembly Rint = 0.031
Detector resolution: 8.1241 pixels mm-1 θmax = 72.9°, θmin = 4.1°
ω scans h = −17→20
Absorption correction: multi-scan (ABSPACK; Oxford Diffraction, 2006) k = −13→13
Tmin = 0.502, Tmax = 1.000 l = −25→25
50677 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.156 w = 1/[σ2(Fo2) + (0.0978P)2 + 2.03P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max = 0.001
7402 reflections Δρmax = 0.95 e Å3
496 parameters Δρmin = −0.57 e Å3
6 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.00135 (17)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
C1 0.19533 (12) 0.48508 (17) −0.00966 (10) 0.0373 (4)
C2 0.27341 (13) 0.43982 (19) −0.01066 (12) 0.0437 (5)
H2 0.2910 0.3659 0.0087 0.052*
C3 0.32285 (14) 0.5010 (2) −0.03890 (12) 0.0485 (5)
H3 0.3756 0.4706 −0.0379 0.058*
N2 0.29823 (12) 0.60467 (17) −0.06847 (10) 0.0459 (4)
H2N 0.3334 (18) 0.643 (2) −0.0811 (15) 0.055*
C4 0.22400 (13) 0.64928 (19) −0.07146 (11) 0.0420 (4)
H4 0.2076 0.7215 −0.0937 0.050*
C5 0.17111 (12) 0.59364 (17) −0.04330 (10) 0.0369 (4)
S1 0.07610 (3) 0.66425 (4) −0.04649 (2) 0.03510 (15)
O1 0.08434 (9) 0.69312 (13) 0.02476 (7) 0.0404 (3)
O2 0.06917 (10) 0.76225 (12) −0.09190 (8) 0.0426 (3)
N3 0.00665 (10) 0.56968 (14) −0.07018 (8) 0.0357 (3)
C6 −0.00564 (12) 0.51828 (17) −0.13380 (10) 0.0365 (4)
O3 0.02024 (10) 0.55425 (13) −0.18126 (8) 0.0460 (4)
N4 −0.04911 (12) 0.41930 (16) −0.14092 (9) 0.0445 (4)
H4N −0.0622 (17) 0.389 (2) −0.1047 (15) 0.053*
C7 −0.05800 (17) 0.3402 (2) −0.19833 (12) 0.0533 (6)
H7 −0.0722 0.3856 −0.2424 0.064*
C8 −0.1274 (2) 0.2567 (3) −0.20331 (17) 0.0795 (10)
H81 −0.1136 0.2106 −0.1607 0.119*
H82 −0.1346 0.2058 −0.2433 0.119*
H83 −0.1795 0.2992 −0.2092 0.119*
C9 0.0240 (2) 0.2749 (3) −0.1887 (2) 0.0837 (10)
H91 0.0699 0.3303 −0.1823 0.126*
H92 0.0186 0.2277 −0.2299 0.126*
H93 0.0361 0.2251 −0.1477 0.126*
N1 0.14707 (11) 0.42831 (15) 0.02100 (10) 0.0403 (4)
H1N 0.0987 (18) 0.452 (2) 0.0161 (14) 0.048*
C10 0.17350 (13) 0.32972 (18) 0.06475 (11) 0.0404 (4)
C11 0.12689 (15) 0.23004 (18) 0.04998 (12) 0.0445 (5)
H11 0.0792 0.2260 0.0095 0.053*
C12 0.14906 (17) 0.1347 (2) 0.09404 (14) 0.0527 (6)
C13 0.21970 (18) 0.1432 (2) 0.15223 (14) 0.0602 (7)
H13 0.2363 0.0787 0.1824 0.072*
C14 0.26604 (18) 0.2426 (3) 0.16715 (15) 0.0632 (7)
H14 0.3140 0.2464 0.2074 0.076*
C15 0.24336 (16) 0.3373 (2) 0.12404 (13) 0.0542 (6)
H15 0.2750 0.4066 0.1347 0.065*
C16 0.0971 (2) 0.0273 (2) 0.07844 (19) 0.0770 (9)
H161 0.1053 −0.0119 0.0384 0.116*
H162 0.0378 0.0474 0.0679 0.116*
H163 0.1141 −0.0241 0.1188 0.116*
C17 0.46551 (12) 0.07450 (16) 0.14989 (10) 0.0361 (4)
C18 0.45704 (14) 0.05823 (19) 0.21650 (10) 0.0427 (5)
H18 0.4363 −0.0129 0.2275 0.051*
C19 0.47838 (14) 0.14364 (19) 0.26474 (11) 0.0437 (5)
H19 0.4733 0.1307 0.3094 0.052*
N6 0.50654 (12) 0.24638 (16) 0.25054 (9) 0.0418 (4)
H6N 0.5204 (16) 0.304 (2) 0.2829 (14) 0.050*
C20 0.51362 (13) 0.26759 (17) 0.18762 (11) 0.0381 (4)
H20 0.5332 0.3408 0.1785 0.046*
C21 0.49306 (12) 0.18543 (16) 0.13642 (10) 0.0344 (4)
S2 0.50042 (3) 0.21861 (4) 0.05304 (2) 0.03520 (15)
O5 0.53461 (10) 0.33358 (12) 0.05809 (8) 0.0430 (3)
O4 0.41666 (9) 0.20622 (13) 0.00468 (8) 0.0438 (3)
N7 0.55423 (10) 0.11763 (14) 0.03788 (8) 0.0360 (3)
C22 0.63508 (13) 0.10566 (17) 0.08225 (10) 0.0373 (4)
O6 0.67497 (9) 0.18090 (13) 0.12360 (7) 0.0432 (3)
N8 0.66900 (14) 0.00256 (19) 0.07774 (11) 0.0555 (5)
H8N 0.636 (2) −0.047 (3) 0.0531 (17) 0.067*
C23 0.75356 (18) −0.0308 (3) 0.11811 (16) 0.0696 (8)
H23 0.7776 0.0268 0.1559 0.084*
C24 0.7492 (3) −0.1528 (5) 0.1507 (3) 0.134 (2)
H241 0.7311 −0.1440 0.1917 0.201*
H242 0.8046 −0.1890 0.1642 0.201*
H243 0.7089 −0.2015 0.1164 0.201*
C25 0.8076 (3) −0.0405 (5) 0.0741 (3) 0.128 (2)
H251 0.7865 −0.1020 0.0398 0.192*
H252 0.8649 −0.0588 0.1031 0.192*
H253 0.8074 0.0328 0.0500 0.192*
N5 0.45039 (12) −0.01004 (14) 0.10282 (9) 0.0404 (4)
H5N 0.4718 (16) −0.004 (2) 0.0697 (14) 0.048*
C26 0.41125 (13) −0.11707 (16) 0.10831 (10) 0.0370 (4)
C27 0.45708 (15) −0.21778 (18) 0.11739 (11) 0.0426 (5)
H27 0.5151 −0.2154 0.1226 0.051*
C28 0.41752 (17) −0.32354 (19) 0.11896 (11) 0.0497 (5)
C29 0.33272 (17) −0.3224 (2) 0.11144 (12) 0.0525 (6)
H29 0.3052 −0.3934 0.1131 0.063*
C30 0.28749 (16) −0.2224 (2) 0.10169 (13) 0.0521 (6)
H30 0.2293 −0.2246 0.0959 0.063*
C31 0.32645 (14) −0.11830 (19) 0.10030 (11) 0.0440 (5)
H31 0.2956 −0.0483 0.0939 0.053*
C32 0.4664 (2) −0.4336 (2) 0.12887 (16) 0.0704 (8)
H321 0.4287 −0.4990 0.1264 0.106*
H322 0.5100 −0.4328 0.1744 0.106*
H323 0.4925 −0.4410 0.0923 0.106*
O8 0.7099 (4) 0.2571 (5) 0.2572 (2) 0.0972 (18) 0.50
H81O 0.740 (6) 0.221 (10) 0.284 (4) 0.146* 0.50
H82O 0.706 (7) 0.228 (10) 0.223 (4) 0.146* 0.50
O7 0.6701 (3) 0.4556 (5) 0.2137 (3) 0.0920 (14) 0.50
H7O 0.679 (6) 0.397 (2) 0.2459 (11) 0.138* 0.50
C33 0.7049 (4) 0.5514 (6) 0.2484 (5) 0.087 (2) 0.50
H331 0.6809 0.5664 0.2856 0.131* 0.50
H332 0.6935 0.6171 0.2164 0.131* 0.50
H333 0.7656 0.5405 0.2685 0.131* 0.50

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0406 (10) 0.0365 (10) 0.0361 (9) −0.0021 (8) 0.0140 (8) 0.0001 (8)
C2 0.0443 (11) 0.0418 (11) 0.0480 (11) 0.0013 (8) 0.0192 (9) −0.0009 (9)
C3 0.0451 (11) 0.0534 (13) 0.0518 (12) −0.0019 (10) 0.0221 (10) −0.0072 (10)
N2 0.0467 (10) 0.0478 (10) 0.0502 (10) −0.0092 (8) 0.0254 (8) −0.0023 (8)
C4 0.0476 (11) 0.0412 (11) 0.0407 (10) −0.0066 (9) 0.0188 (9) −0.0011 (8)
C5 0.0421 (10) 0.0360 (10) 0.0341 (9) −0.0047 (8) 0.0142 (8) 0.0008 (7)
S1 0.0427 (3) 0.0318 (3) 0.0331 (3) −0.00044 (17) 0.01538 (19) 0.00419 (17)
O1 0.0506 (8) 0.0383 (7) 0.0344 (7) −0.0024 (6) 0.0165 (6) 0.0000 (6)
O2 0.0553 (8) 0.0328 (7) 0.0412 (8) −0.0009 (6) 0.0174 (6) 0.0084 (6)
N3 0.0400 (8) 0.0349 (8) 0.0341 (8) −0.0001 (6) 0.0146 (6) 0.0034 (6)
C6 0.0414 (10) 0.0349 (9) 0.0343 (9) 0.0022 (8) 0.0139 (8) 0.0068 (7)
O3 0.0672 (10) 0.0375 (8) 0.0396 (7) −0.0043 (7) 0.0258 (7) 0.0047 (6)
N4 0.0593 (11) 0.0420 (10) 0.0351 (9) −0.0114 (8) 0.0191 (8) 0.0007 (7)
C7 0.0709 (15) 0.0504 (13) 0.0381 (11) −0.0137 (11) 0.0166 (10) −0.0022 (9)
C8 0.102 (2) 0.077 (2) 0.0585 (16) −0.0408 (19) 0.0252 (16) −0.0156 (15)
C9 0.093 (2) 0.074 (2) 0.081 (2) 0.0160 (17) 0.0221 (18) −0.0136 (17)
N1 0.0387 (9) 0.0367 (9) 0.0487 (10) 0.0042 (7) 0.0183 (7) 0.0114 (7)
C10 0.0435 (10) 0.0377 (10) 0.0435 (11) 0.0053 (8) 0.0185 (9) 0.0081 (8)
C11 0.0512 (12) 0.0373 (11) 0.0488 (12) 0.0033 (9) 0.0212 (10) 0.0044 (9)
C12 0.0706 (15) 0.0356 (11) 0.0616 (14) 0.0065 (10) 0.0345 (12) 0.0070 (10)
C13 0.0782 (17) 0.0478 (13) 0.0590 (15) 0.0194 (12) 0.0279 (13) 0.0203 (11)
C14 0.0624 (15) 0.0654 (16) 0.0553 (14) 0.0104 (13) 0.0098 (12) 0.0166 (12)
C15 0.0526 (13) 0.0508 (14) 0.0545 (14) −0.0008 (10) 0.0103 (10) 0.0092 (10)
C16 0.107 (2) 0.0411 (14) 0.089 (2) −0.0082 (14) 0.0399 (19) 0.0062 (14)
C17 0.0435 (10) 0.0321 (9) 0.0348 (9) −0.0025 (8) 0.0156 (8) −0.0036 (7)
C18 0.0576 (12) 0.0384 (10) 0.0365 (10) −0.0092 (9) 0.0214 (9) −0.0039 (8)
C19 0.0543 (12) 0.0451 (11) 0.0353 (10) −0.0058 (9) 0.0192 (9) −0.0050 (8)
N6 0.0520 (10) 0.0380 (9) 0.0374 (9) −0.0038 (8) 0.0172 (7) −0.0111 (7)
C20 0.0434 (10) 0.0323 (9) 0.0404 (10) −0.0012 (8) 0.0159 (8) −0.0047 (8)
C21 0.0401 (9) 0.0297 (9) 0.0359 (9) −0.0021 (7) 0.0159 (8) −0.0042 (7)
S2 0.0431 (3) 0.0301 (3) 0.0348 (3) −0.00235 (17) 0.0158 (2) −0.00089 (16)
O5 0.0552 (8) 0.0292 (7) 0.0493 (8) −0.0046 (6) 0.0234 (7) 0.0004 (6)
O4 0.0443 (8) 0.0432 (8) 0.0416 (8) −0.0003 (6) 0.0104 (6) 0.0008 (6)
N7 0.0446 (9) 0.0332 (8) 0.0332 (8) −0.0022 (7) 0.0166 (7) −0.0046 (6)
C22 0.0461 (10) 0.0366 (10) 0.0335 (9) −0.0023 (8) 0.0187 (8) −0.0019 (7)
O6 0.0512 (8) 0.0379 (7) 0.0385 (7) −0.0064 (6) 0.0113 (6) −0.0033 (6)
N8 0.0555 (12) 0.0475 (11) 0.0560 (12) 0.0099 (9) 0.0071 (9) −0.0164 (9)
C23 0.0596 (15) 0.0695 (18) 0.0684 (17) 0.0205 (13) 0.0045 (13) −0.0180 (14)
C24 0.101 (3) 0.176 (5) 0.126 (4) 0.047 (3) 0.037 (3) 0.084 (4)
C25 0.087 (3) 0.182 (5) 0.128 (4) 0.060 (3) 0.054 (3) 0.057 (4)
N5 0.0600 (11) 0.0299 (8) 0.0378 (9) −0.0102 (7) 0.0250 (8) −0.0059 (7)
C26 0.0514 (11) 0.0313 (9) 0.0307 (9) −0.0070 (8) 0.0163 (8) −0.0040 (7)
C27 0.0544 (12) 0.0383 (11) 0.0369 (10) 0.0019 (9) 0.0172 (9) −0.0022 (8)
C28 0.0794 (16) 0.0329 (11) 0.0373 (11) 0.0006 (10) 0.0192 (10) −0.0040 (8)
C29 0.0742 (16) 0.0402 (12) 0.0450 (12) −0.0181 (11) 0.0218 (11) −0.0050 (9)
C30 0.0544 (13) 0.0528 (14) 0.0514 (13) −0.0147 (10) 0.0201 (10) −0.0059 (10)
C31 0.0507 (12) 0.0417 (11) 0.0412 (11) −0.0013 (9) 0.0168 (9) −0.0015 (8)
C32 0.103 (2) 0.0414 (13) 0.0661 (17) 0.0128 (14) 0.0255 (16) 0.0007 (12)
O8 0.109 (4) 0.119 (4) 0.042 (2) 0.056 (3) −0.006 (2) −0.015 (3)
O7 0.080 (3) 0.090 (3) 0.100 (4) −0.010 (3) 0.020 (3) −0.007 (3)
C33 0.049 (3) 0.066 (4) 0.134 (6) 0.007 (3) 0.013 (3) −0.012 (4)

Geometric parameters (Å, °)

C1—N1 1.344 (3) C18—H18 0.9500
C1—C2 1.422 (3) C19—N6 1.347 (3)
C1—C5 1.428 (3) C19—H19 0.9500
C2—C3 1.354 (3) N6—C20 1.345 (3)
C2—H2 0.9500 N6—H6N 0.92 (3)
C3—N2 1.348 (3) C20—C21 1.371 (3)
C3—H3 0.9500 C20—H20 0.9500
N2—C4 1.337 (3) C21—S2 1.781 (2)
N2—H2N 0.84 (3) S2—O5 1.4428 (14)
C4—C5 1.365 (3) S2—O4 1.4462 (15)
C4—H4 0.9500 S2—N7 1.5704 (16)
C5—S1 1.781 (2) N7—C22 1.379 (3)
S1—O2 1.4449 (14) C22—O6 1.248 (2)
S1—O1 1.4491 (14) C22—N8 1.341 (3)
S1—N3 1.5630 (17) N8—C23 1.451 (3)
N3—C6 1.378 (3) N8—H8N 0.85 (3)
C6—O3 1.250 (2) C23—C25 1.471 (5)
C6—N4 1.344 (3) C23—C24 1.574 (6)
N4—C7 1.454 (3) C23—H23 1.0000
N4—H4N 0.90 (3) C24—H241 0.9800
C7—C8 1.496 (4) C24—H242 0.9800
C7—C9 1.533 (4) C24—H243 0.9800
C7—H7 1.0000 C25—H251 0.9800
C8—H81 0.9800 C25—H252 0.9800
C8—H82 0.9800 C25—H253 0.9800
C8—H83 0.9800 N5—C26 1.426 (2)
C9—H91 0.9800 N5—H5N 0.86 (3)
C9—H92 0.9800 C26—C27 1.379 (3)
C9—H93 0.9800 C26—C31 1.385 (3)
N1—C10 1.429 (3) C27—C28 1.401 (3)
N1—H1N 0.83 (3) C27—H27 0.9500
C10—C11 1.375 (3) C28—C29 1.387 (4)
C10—C15 1.392 (3) C28—C32 1.497 (3)
C11—C12 1.396 (3) C29—C30 1.367 (4)
C11—H11 0.9500 C29—H29 0.9500
C12—C13 1.387 (4) C30—C31 1.379 (3)
C12—C16 1.498 (4) C30—H30 0.9500
C13—C14 1.371 (4) C31—H31 0.9500
C13—H13 0.9500 C32—H321 0.9800
C14—C15 1.380 (4) C32—H322 0.9800
C14—H14 0.9500 C32—H323 0.9800
C15—H15 0.9500 O8—H81O 0.75 (5)
C16—H161 0.9800 O8—H82O 0.75 (5)
C16—H162 0.9800 O7—C33 1.346 (8)
C16—H163 0.9800 O7—H7O 0.923 (8)
C17—N5 1.336 (2) C33—H331 0.9800
C17—C18 1.419 (3) C33—H332 0.9800
C17—C21 1.423 (3) C33—H333 0.9800
C18—C19 1.359 (3)
N1—C1—C2 121.69 (19) C19—C18—H18 119.7
N1—C1—C5 122.07 (18) C17—C18—H18 119.7
C2—C1—C5 116.25 (18) N6—C19—C18 121.33 (19)
C3—C2—C1 120.7 (2) N6—C19—H19 119.3
C3—C2—H2 119.7 C18—C19—H19 119.3
C1—C2—H2 119.7 C20—N6—C19 120.66 (18)
N2—C3—C2 120.9 (2) C20—N6—H6N 117.9 (17)
N2—C3—H3 119.6 C19—N6—H6N 121.4 (17)
C2—C3—H3 119.6 N6—C20—C21 121.13 (19)
C4—N2—C3 121.00 (19) N6—C20—H20 119.4
C4—N2—H2N 121 (2) C21—C20—H20 119.4
C3—N2—H2N 117.2 (19) C20—C21—C17 120.05 (18)
N2—C4—C5 121.6 (2) C20—C21—S2 119.65 (15)
N2—C4—H4 119.2 C17—C21—S2 120.30 (14)
C5—C4—H4 119.2 O5—S2—O4 114.89 (9)
C4—C5—C1 119.49 (19) O5—S2—N7 117.42 (9)
C4—C5—S1 117.85 (16) O4—S2—N7 106.96 (9)
C1—C5—S1 122.59 (15) O5—S2—C21 106.24 (9)
O2—S1—O1 114.78 (9) O4—S2—C21 106.00 (9)
O2—S1—N3 117.08 (9) N7—S2—C21 104.24 (9)
O1—S1—N3 107.04 (9) C22—N7—S2 117.27 (13)
O2—S1—C5 105.84 (9) O6—C22—N8 121.3 (2)
O1—S1—C5 105.79 (9) O6—C22—N7 125.21 (18)
N3—S1—C5 105.32 (9) N8—C22—N7 113.48 (18)
C6—N3—S1 117.75 (14) C22—N8—C23 124.2 (2)
O3—C6—N4 120.94 (19) C22—N8—H8N 116 (2)
O3—C6—N3 126.50 (19) C23—N8—H8N 119 (2)
N4—C6—N3 112.55 (17) N8—C23—C25 111.3 (3)
C6—N4—C7 122.53 (18) N8—C23—C24 107.9 (3)
C6—N4—H4N 120.4 (18) C25—C23—C24 108.0 (4)
C7—N4—H4N 115.1 (18) N8—C23—H23 109.9
N4—C7—C8 109.9 (2) C25—C23—H23 109.9
N4—C7—C9 110.6 (2) C24—C23—H23 109.9
C8—C7—C9 110.0 (3) C23—C24—H241 109.5
N4—C7—H7 108.8 C23—C24—H242 109.5
C8—C7—H7 108.8 H241—C24—H242 109.5
C9—C7—H7 108.8 C23—C24—H243 109.5
C7—C8—H81 109.5 H241—C24—H243 109.5
C7—C8—H82 109.5 H242—C24—H243 109.5
H81—C8—H82 109.5 C23—C25—H251 109.5
C7—C8—H83 109.5 C23—C25—H252 109.5
H81—C8—H83 109.5 H251—C25—H252 109.5
H82—C8—H83 109.5 C23—C25—H253 109.5
C7—C9—H91 109.5 H251—C25—H253 109.5
C7—C9—H92 109.5 H252—C25—H253 109.5
H91—C9—H92 109.5 C17—N5—C26 124.70 (17)
C7—C9—H93 109.5 C17—N5—H5N 117.8 (18)
H91—C9—H93 109.5 C26—N5—H5N 116.9 (18)
H92—C9—H93 109.5 C27—C26—C31 121.27 (19)
C1—N1—C10 124.46 (18) C27—C26—N5 119.60 (19)
C1—N1—H1N 119.7 (19) C31—C26—N5 119.01 (19)
C10—N1—H1N 115.8 (19) C26—C27—C28 119.6 (2)
C11—C10—C15 120.5 (2) C26—C27—H27 120.2
C11—C10—N1 119.59 (19) C28—C27—H27 120.2
C15—C10—N1 119.82 (19) C29—C28—C27 118.0 (2)
C10—C11—C12 120.5 (2) C29—C28—C32 121.7 (2)
C10—C11—H11 119.7 C27—C28—C32 120.3 (2)
C12—C11—H11 119.7 C30—C29—C28 122.0 (2)
C13—C12—C11 118.2 (2) C30—C29—H29 119.0
C13—C12—C16 121.5 (2) C28—C29—H29 119.0
C11—C12—C16 120.3 (3) C29—C30—C31 119.9 (2)
C14—C13—C12 121.4 (2) C29—C30—H30 120.0
C14—C13—H13 119.3 C31—C30—H30 120.0
C12—C13—H13 119.3 C30—C31—C26 119.1 (2)
C13—C14—C15 120.4 (3) C30—C31—H31 120.4
C13—C14—H14 119.8 C26—C31—H31 120.4
C15—C14—H14 119.8 C28—C32—H321 109.5
C14—C15—C10 119.1 (2) C28—C32—H322 109.5
C14—C15—H15 120.5 H321—C32—H322 109.5
C10—C15—H15 120.5 C28—C32—H323 109.5
C12—C16—H161 109.5 H321—C32—H323 109.5
C12—C16—H162 109.5 H322—C32—H323 109.5
H161—C16—H162 109.5 H81O—O8—H82O 105.0 (10)
C12—C16—H163 109.5 C33—O7—H7O 107.0 (7)
H161—C16—H163 109.5 O7—C33—H331 109.5
H162—C16—H163 109.5 O7—C33—H332 109.5
N5—C17—C18 122.11 (18) H331—C33—H332 109.5
N5—C17—C21 121.63 (17) O7—C33—H333 109.5
C18—C17—C21 116.25 (17) H331—C33—H333 109.5
C19—C18—C17 120.50 (19) H332—C33—H333 109.5
N1—C1—C2—C3 −176.8 (2) N5—C17—C18—C19 175.5 (2)
C5—C1—C2—C3 3.5 (3) C21—C17—C18—C19 −3.0 (3)
C1—C2—C3—N2 −1.9 (3) C17—C18—C19—N6 1.2 (4)
C2—C3—N2—C4 −0.8 (3) C18—C19—N6—C20 0.6 (3)
C3—N2—C4—C5 1.7 (3) C19—N6—C20—C21 −0.5 (3)
N2—C4—C5—C1 0.1 (3) N6—C20—C21—C17 −1.5 (3)
N2—C4—C5—S1 176.95 (16) N6—C20—C21—S2 178.14 (16)
N1—C1—C5—C4 177.7 (2) N5—C17—C21—C20 −175.4 (2)
C2—C1—C5—C4 −2.6 (3) C18—C17—C21—C20 3.1 (3)
N1—C1—C5—S1 1.0 (3) N5—C17—C21—S2 5.0 (3)
C2—C1—C5—S1 −179.31 (15) C18—C17—C21—S2 −176.49 (16)
C4—C5—S1—O2 10.41 (19) C20—C21—S2—O5 3.78 (19)
C1—C5—S1—O2 −172.81 (16) C17—C21—S2—O5 −176.60 (16)
C4—C5—S1—O1 −111.79 (17) C20—C21—S2—O4 −118.87 (17)
C1—C5—S1—O1 64.99 (18) C17—C21—S2—O4 60.75 (18)
C4—C5—S1—N3 135.05 (17) C20—C21—S2—N7 128.44 (17)
C1—C5—S1—N3 −48.17 (18) C17—C21—S2—N7 −51.94 (18)
O2—S1—N3—C6 57.06 (17) O5—S2—N7—C22 54.98 (17)
O1—S1—N3—C6 −172.47 (14) O4—S2—N7—C22 −174.19 (14)
C5—S1—N3—C6 −60.20 (16) C21—S2—N7—C22 −62.19 (16)
S1—N3—C6—O3 −15.8 (3) S2—N7—C22—O6 −16.3 (3)
S1—N3—C6—N4 163.11 (15) S2—N7—C22—N8 163.34 (16)
O3—C6—N4—C7 9.4 (3) O6—C22—N8—C23 −1.3 (4)
N3—C6—N4—C7 −169.6 (2) N7—C22—N8—C23 179.1 (2)
C6—N4—C7—C8 −164.5 (2) C22—N8—C23—C25 −110.2 (4)
C6—N4—C7—C9 73.9 (3) C22—N8—C23—C24 131.5 (3)
C2—C1—N1—C10 10.9 (3) C18—C17—N5—C26 11.2 (3)
C5—C1—N1—C10 −169.43 (19) C21—C17—N5—C26 −170.33 (19)
C1—N1—C10—C11 −125.7 (2) C17—N5—C26—C27 −112.5 (2)
C1—N1—C10—C15 57.9 (3) C17—N5—C26—C31 71.3 (3)
C15—C10—C11—C12 −0.2 (3) C31—C26—C27—C28 −0.4 (3)
N1—C10—C11—C12 −176.6 (2) N5—C26—C27—C28 −176.50 (18)
C10—C11—C12—C13 −0.9 (3) C26—C27—C28—C29 −0.2 (3)
C10—C11—C12—C16 178.8 (2) C26—C27—C28—C32 −179.9 (2)
C11—C12—C13—C14 1.1 (4) C27—C28—C29—C30 1.0 (3)
C16—C12—C13—C14 −178.5 (3) C32—C28—C29—C30 −179.3 (2)
C12—C13—C14—C15 −0.3 (4) C28—C29—C30—C31 −1.1 (4)
C13—C14—C15—C10 −0.9 (4) C29—C30—C31—C26 0.5 (3)
C11—C10—C15—C14 1.1 (4) C27—C26—C31—C30 0.2 (3)
N1—C10—C15—C14 177.5 (2) N5—C26—C31—C30 176.38 (19)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1N···N3 0.83 (3) 2.37 (3) 2.986 (2) 131 (2)
N1—H1N···N3i 0.83 (3) 2.38 (3) 3.060 (2) 139 (2)
N2—H2N···O5ii 0.84 (3) 2.14 (3) 2.847 (2) 142 (3)
N2—H2N···O6ii 0.84 (3) 2.21 (3) 2.822 (2) 130 (2)
N4—H4N···O1i 0.90 (3) 2.02 (3) 2.919 (2) 174 (3)
N5—H5N···N7 0.86 (3) 2.21 (3) 2.910 (2) 138 (2)
N5—H5N···N7iii 0.86 (3) 2.47 (3) 3.098 (2) 130 (2)
N6—H6N···O2iv 0.92 (3) 2.53 (3) 3.036 (2) 115 (2)
N6—H6N···O3iv 0.92 (3) 1.79 (3) 2.667 (2) 158 (2)
N8—H8N···O4iii 0.85 (3) 2.21 (3) 3.034 (3) 164 (3)
O7—H7O···O8 0.92 (1) 1.70 (5) 2.480 (8) 140 (7)
O7—H7O···O8v 0.92 (1) 2.50 (10) 2.995 (9) 114 (8)
O8—H82O···O6 0.75 (5) 2.00 (6) 2.735 (5) 166 (11)
O8—H81O···O6v 0.75 (5) 2.02 (6) 2.721 (5) 158 (12)

Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y+1, −z; (iii) −x+1, −y, −z; (iv) x+1/2, −y+1, z+1/2; (v) −x+3/2, y, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB2934).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901160X/hb2934sup1.cif

e-65-0o970-sup1.cif (31.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680901160X/hb2934Isup2.hkl

e-65-0o970-Isup2.hkl (354.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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