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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Apr 8;65(Pt 5):o975. doi: 10.1107/S160053680901215X

N′-(5-Chloro-2-hydroxy­benzyl­idene)-4-hydroxy­benzohydrazide

Xiao-Yang Qiu a,*
PMCID: PMC2977672  PMID: 21584015

Abstract

The title Schiff base compound, C14H11ClN2O3, was prepared by the reaction of 5-chloro­salicylaldehyde and 4-hydroxy­benzohydrazide. The mol­ecule exists in a trans configuration with respect to the methyl­idene group. The dihedral angle between the two benzene rings is 40.1 (2)°. An intra­molecular O—H⋯N hydrogen bond helps to stabilize the mol­ecular conformation. In the crystal structure, mol­ecules are linked into a three-dimensional network by inter­molecular N—H⋯O and O—H⋯O hydrogen bonds.

Related literature

For the biological properties of hydrazone compounds, see: Bedia et al. (2006); Rollas et al. (2002); Fun et al. (2008). For the structures of hydrazone compounds we have reported previously, see: Qiu, Fang et al. (2006); Qiu, Luo et al., (2006a ,b ); Qiu, Xu et al. (2006). For bond-length data, see: Allen et al. (1987). For related structures see: Singh et al. (2007); Narayana et al. (2007); Cui et al. (2007); Diao et al. (2008).graphic file with name e-65-0o975-scheme1.jpg

Experimental

Crystal data

  • C14H11ClN2O3

  • M r = 290.70

  • Orthorhombic, Inline graphic

  • a = 9.423 (1) Å

  • b = 9.839 (1) Å

  • c = 13.770 (1) Å

  • V = 1276.7 (2) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.31 mm−1

  • T = 298 K

  • 0.17 × 0.15 × 0.15 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.950, T max = 0.955

  • 7398 measured reflections

  • 2231 independent reflections

  • 2144 reflections with I > 2σ(I)

  • R int = 0.022

Refinement

  • R[F 2 > 2σ(F 2)] = 0.026

  • wR(F 2) = 0.071

  • S = 1.06

  • 2231 reflections

  • 187 parameters

  • 2 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.21 e Å−3

  • Δρmin = −0.32 e Å−3

  • Absolute structure: Flack (1983), 784 Friedel pairs

  • Flack parameter: −0.01 (6)

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680901215X/sj2605sup1.cif

e-65-0o975-sup1.cif (15.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680901215X/sj2605Isup2.hkl

e-65-0o975-Isup2.hkl (109.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2⋯O2i 0.892 (10) 2.121 (11) 3.0065 (18) 172 (3)
O3—H3⋯O2ii 0.82 1.98 2.7479 (19) 157
O1—H1⋯N1 0.82 1.89 2.6057 (19) 145

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The author acknowledges the Natural Science Foundation of the Education Office of Anhui Province (Project No. 2009 A150020).

supplementary crystallographic information

Comment

Hyrazone compounds, derived from the reaction of aldehydes with hydrazides, have been widely studied due to their excellent biological properties (Bedia et al., 2006; Rollas et al., 2002; Fun et al., 2008). Recently, we have reported several Schiff base hydrazone compounds (Qiu, Fang et al., 2006; Qiu, Luo et al., 2006a,b; Qiu, Xu et al., 2006), and we report herein the crystal structure of the new title compound, (I), Fig. 1.

The molecule in (I) exists in a trans configuration with respect to the methylidene group. The dihedral angle between the two benzene rings is 40.1 (2)°. The bond lengths in (I) are found to have normal values (Allen et al., 1987) and are comparable to the values found in similar compounds (Singh et al., 2007; Narayana et al., 2007; Cui et al., 2007; Diao et al., 2008).

An intramolecular O–H···N hydrogen bond (Table 1) helps to stabilize the molecular conformation. In the crystal structure, molecules are linked into a three-dimensional network by intermolecular N–H···O and O–H···O hydrogen bonds (Table 1 and Fig. 2).

Experimental

The title compound was prepared by the Schiff base condensation of equimolar amounts (0.5 mmol each) of 5-chlorosalicylaldehyde and 4-hydroxybenzohydrazide in methanol (20 ml). Excess methanol was removed from the reaction mixture by distillation. The colourless solid was filtered and dried in air. Colourless block-shaped crystals suitable for X-ray diffraction were obtained from a methanol solution.

Refinement

The imino H atoms were located in a difference map and refined with N–H distances restrained to 0.90 (1) Å. The remaining H atoms were positioned geometrically [C–H = 0.93 Å, O–H = 0.82 Å] and refined using a riding model, with Uiso(H) = 1.2Ueq(C) and 1.5Ueq(O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with atom labels and 30% probability displacement ellipsoids for non-H atoms.

Fig. 2.

Fig. 2.

The crystal packing of (I), viewed along the b axis with hydrogen bonds drawn as dashed lines.

Crystal data

C14H11ClN2O3 F(000) = 600
Mr = 290.70 Dx = 1.513 Mg m3
Orthorhombic, Pna21 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2n Cell parameters from 4763 reflections
a = 9.423 (1) Å θ = 2.5–30.6°
b = 9.839 (1) Å µ = 0.31 mm1
c = 13.770 (1) Å T = 298 K
V = 1276.7 (2) Å3 Block, colourless
Z = 4 0.17 × 0.15 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer 2231 independent reflections
Radiation source: fine-focus sealed tube 2144 reflections with I > 2σ(I)
graphite Rint = 0.022
ω scans θmax = 27.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −12→11
Tmin = 0.950, Tmax = 0.955 k = −12→12
7398 measured reflections l = −17→11

Refinement

Refinement on F2 Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: full H atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.026 w = 1/[σ2(Fo2) + (0.0409P)2 + 0.1827P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.071 (Δ/σ)max = 0.001
S = 1.06 Δρmax = 0.21 e Å3
2231 reflections Δρmin = −0.32 e Å3
187 parameters Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
2 restraints Extinction coefficient: 0.034 (3)
Primary atom site location: structure-invariant direct methods Absolute structure: Flack (1983), 784 Friedel pairs
Secondary atom site location: difference Fourier map Flack parameter: −0.01 (6)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.74914 (6) 0.47741 (5) 1.21657 (5) 0.05224 (15)
N1 0.99352 (15) 0.30628 (14) 0.80967 (10) 0.0316 (3)
N2 0.94949 (14) 0.28112 (13) 0.71621 (12) 0.0319 (3)
O1 1.19292 (14) 0.32175 (17) 0.94031 (11) 0.0504 (4)
H1 1.1598 0.3057 0.8865 0.076*
O2 1.14143 (12) 0.14658 (12) 0.69247 (10) 0.0370 (3)
O3 0.84616 (17) 0.10538 (15) 0.27816 (10) 0.0505 (4)
H3 0.8733 0.0312 0.2583 0.076*
C1 0.94953 (17) 0.38640 (15) 0.96863 (13) 0.0312 (3)
C2 1.08639 (18) 0.35624 (17) 1.00215 (14) 0.0346 (4)
C3 1.1165 (2) 0.36019 (19) 1.10078 (15) 0.0403 (4)
H3A 1.2072 0.3386 1.1225 0.048*
C4 1.0133 (2) 0.39569 (17) 1.16663 (14) 0.0391 (4)
H4 1.0332 0.3960 1.2328 0.047*
C5 0.87956 (19) 0.43088 (17) 1.13363 (14) 0.0362 (4)
C6 0.84744 (18) 0.42738 (18) 1.03619 (14) 0.0352 (4)
H6 0.7573 0.4524 1.0152 0.042*
C7 0.90835 (18) 0.36642 (16) 0.86788 (13) 0.0325 (3)
H7 0.8207 0.3972 0.8459 0.039*
C8 1.03211 (17) 0.20101 (16) 0.65983 (13) 0.0292 (3)
C9 0.98366 (16) 0.17900 (16) 0.55911 (12) 0.0296 (3)
C10 1.03520 (17) 0.06631 (17) 0.50845 (14) 0.0335 (4)
H10 1.0998 0.0084 0.5384 0.040*
C11 0.99177 (18) 0.03955 (17) 0.41486 (14) 0.0350 (4)
H11 1.0265 −0.0361 0.3821 0.042*
C12 0.89604 (19) 0.12597 (18) 0.36973 (13) 0.0352 (4)
C13 0.8457 (2) 0.2394 (2) 0.41833 (15) 0.0450 (5)
H13 0.7826 0.2980 0.3876 0.054*
C14 0.8889 (2) 0.26545 (18) 0.51195 (14) 0.0392 (4)
H14 0.8544 0.3417 0.5441 0.047*
H2 0.8598 (14) 0.303 (3) 0.703 (2) 0.080*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0578 (3) 0.0676 (3) 0.0313 (2) 0.0148 (2) 0.0054 (2) −0.0062 (3)
N1 0.0343 (7) 0.0371 (7) 0.0235 (8) −0.0016 (5) −0.0046 (6) −0.0003 (6)
N2 0.0319 (7) 0.0408 (7) 0.0229 (7) 0.0001 (5) −0.0045 (7) −0.0009 (6)
O1 0.0365 (7) 0.0791 (10) 0.0354 (8) 0.0131 (7) −0.0033 (6) −0.0060 (7)
O2 0.0323 (6) 0.0466 (6) 0.0322 (7) 0.0039 (5) −0.0061 (5) 0.0025 (5)
O3 0.0679 (10) 0.0545 (8) 0.0289 (8) 0.0089 (6) −0.0118 (7) −0.0097 (6)
C1 0.0344 (8) 0.0322 (8) 0.0271 (9) −0.0001 (6) −0.0049 (7) −0.0006 (6)
C2 0.0352 (8) 0.0376 (8) 0.0311 (9) 0.0014 (6) −0.0033 (8) −0.0024 (7)
C3 0.0400 (10) 0.0450 (9) 0.0358 (11) 0.0036 (7) −0.0127 (8) −0.0025 (8)
C4 0.0531 (11) 0.0398 (8) 0.0244 (9) 0.0025 (7) −0.0103 (8) −0.0032 (7)
C5 0.0444 (9) 0.0359 (8) 0.0283 (9) 0.0031 (7) 0.0005 (7) −0.0044 (7)
C6 0.0350 (8) 0.0406 (8) 0.0300 (9) 0.0035 (7) −0.0046 (7) −0.0008 (7)
C7 0.0317 (8) 0.0386 (8) 0.0271 (9) 0.0007 (6) −0.0056 (7) 0.0011 (7)
C8 0.0298 (8) 0.0318 (7) 0.0261 (9) −0.0043 (6) −0.0007 (6) 0.0027 (6)
C9 0.0304 (7) 0.0342 (7) 0.0243 (9) −0.0013 (6) 0.0003 (6) 0.0019 (6)
C10 0.0309 (8) 0.0371 (8) 0.0327 (10) 0.0039 (6) −0.0011 (7) −0.0011 (7)
C11 0.0358 (9) 0.0370 (8) 0.0321 (10) 0.0015 (6) 0.0030 (7) −0.0058 (7)
C12 0.0392 (9) 0.0426 (9) 0.0239 (9) −0.0033 (7) −0.0011 (7) −0.0004 (7)
C13 0.0593 (12) 0.0446 (9) 0.0311 (10) 0.0158 (8) −0.0110 (9) 0.0004 (8)
C14 0.0527 (10) 0.0360 (8) 0.0290 (9) 0.0111 (7) −0.0052 (8) −0.0040 (7)

Geometric parameters (Å, °)

Cl1—C5 1.7391 (19) C4—C5 1.384 (3)
N1—C7 1.279 (2) C4—H4 0.9300
N1—N2 1.375 (2) C5—C6 1.376 (3)
N2—C8 1.353 (2) C6—H6 0.9300
N2—H2 0.892 (10) C7—H7 0.9300
O1—C2 1.359 (2) C8—C9 1.476 (2)
O1—H1 0.8200 C9—C14 1.394 (2)
O2—C8 1.245 (2) C9—C10 1.397 (2)
O3—C12 1.361 (2) C10—C11 1.378 (3)
O3—H3 0.8200 C10—H10 0.9300
C1—C6 1.398 (2) C11—C12 1.387 (2)
C1—C2 1.402 (2) C11—H11 0.9300
C1—C7 1.454 (2) C12—C13 1.385 (3)
C2—C3 1.388 (3) C13—C14 1.376 (3)
C3—C4 1.374 (3) C13—H13 0.9300
C3—H3A 0.9300 C14—H14 0.9300
C7—N1—N2 118.72 (14) N1—C7—C1 119.54 (15)
C8—N2—N1 117.94 (13) N1—C7—H7 120.2
C8—N2—H2 125 (2) C1—C7—H7 120.2
N1—N2—H2 116 (2) O2—C8—N2 121.31 (16)
C2—O1—H1 109.5 O2—C8—C9 122.14 (15)
C12—O3—H3 109.5 N2—C8—C9 116.53 (14)
C6—C1—C2 118.37 (16) C14—C9—C10 118.32 (16)
C6—C1—C7 119.37 (15) C14—C9—C8 123.12 (15)
C2—C1—C7 122.09 (16) C10—C9—C8 118.56 (14)
O1—C2—C3 117.99 (16) C11—C10—C9 121.03 (16)
O1—C2—C1 121.73 (17) C11—C10—H10 119.5
C3—C2—C1 120.28 (16) C9—C10—H10 119.5
C4—C3—C2 120.55 (16) C10—C11—C12 119.69 (16)
C4—C3—H3A 119.7 C10—C11—H11 120.2
C2—C3—H3A 119.7 C12—C11—H11 120.2
C3—C4—C5 119.41 (17) O3—C12—C13 116.71 (16)
C3—C4—H4 120.3 O3—C12—C11 123.28 (16)
C5—C4—H4 120.3 C13—C12—C11 120.01 (17)
C6—C5—C4 120.95 (18) C14—C13—C12 120.13 (17)
C6—C5—Cl1 119.44 (14) C14—C13—H13 119.9
C4—C5—Cl1 119.59 (15) C12—C13—H13 119.9
C5—C6—C1 120.32 (16) C13—C14—C9 120.80 (16)
C5—C6—H6 119.8 C13—C14—H14 119.6
C1—C6—H6 119.8 C9—C14—H14 119.6

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2···O2i 0.89 (1) 2.12 (1) 3.0065 (18) 172 (3)
O3—H3···O2ii 0.82 1.98 2.7479 (19) 157
O1—H1···N1 0.82 1.89 2.6057 (19) 145

Symmetry codes: (i) x−1/2, −y+1/2, z; (ii) −x+2, −y, z−1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ2605).

References

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  2. Bedia, K.-K., Elcin, O., Seda, U., Fatma, K., Nathaly, S., Sevim, R. & Dimoglo, A. (2006). Eur. J. Med. Chem.41, 1253-1261. [DOI] [PubMed]
  3. Bruker (2001). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Cui, J., Yin, H. & Qiao, Y. (2007). Acta Cryst. E63, o3548.
  5. Diao, Y.-P., Zhen, Y.-H., Han, X. & Deng, S. (2008). Acta Cryst. E64, o101. [DOI] [PMC free article] [PubMed]
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680901215X/sj2605sup1.cif

e-65-0o975-sup1.cif (15.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S160053680901215X/sj2605Isup2.hkl

e-65-0o975-Isup2.hkl (109.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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