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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Apr 22;65(Pt 5):o1094. doi: 10.1107/S1600536809014160

(S)-5-Hexyl-1-[(S)-2-hydr­oxy-1-phenyl­ethyl]-4-meth­oxy-1H-pyrrol-2(5H)-one

Jian-Feng Zheng a,*, Li-Jiao Jiang a, Jian-Nan Guo a
PMCID: PMC2977772  PMID: 21583908

Abstract

The title compound, C19H27NO3, was obtained by the reaction of (3S,7aR)-7a-hexyl-7-meth­oxy-3-phenyl-2,3-dihydro­pyrrolo[2,1-b]oxazol-5(7aH)-one and triethyl­silane using titanium(IV) chloride as catalyst. In the mol­ecule, the phenyl and dihydro­pyrrolone rings form a dihedral angle of 83.8 (1)°. O—H⋯O hydrogen-bonding inter­actions lead to the formation of a chain parallel to the a axis.

Related literature

For the bioactivity of methyl tetramates, see: Royles (1995). For the synthesis, see: Jiang et al. (2009).graphic file with name e-65-o1094-scheme1.jpg

Experimental

Crystal data

  • C19H27NO3

  • M r = 317.42

  • Orthorhombic, Inline graphic

  • a = 9.6739 (17) Å

  • b = 10.0995 (18) Å

  • c = 17.929 (3) Å

  • V = 1751.7 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 173 K

  • 0.56 × 0.32 × 0.23 mm

Data collection

  • Bruker APEX CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.956, T max = 0.982

  • 12545 measured reflections

  • 1773 independent reflections

  • 1732 reflections with I > 2σ(I)

  • R int = 0.023

Refinement

  • R[F 2 > 2σ(F 2)] = 0.029

  • wR(F 2) = 0.079

  • S = 1.13

  • 1773 reflections

  • 208 parameters

  • H-atom parameters constrained

  • Δρmax = 0.13 e Å−3

  • Δρmin = −0.13 e Å−3

Data collection: SMART (Bruker, 2001); cell refinement: SMART; data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809014160/bt2921sup1.cif

e-65-o1094-sup1.cif (20.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809014160/bt2921Isup2.hkl

e-65-o1094-Isup2.hkl (87.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O7—H7C⋯O2i 0.84 1.93 2.7475 (18) 163

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the Xiamen University Science Found­ation (grant No. XDKJCX20053013) and the Xiamen Science Foundation (grant No. 3502Z20055019) for financial support. The authors also thank Mr Zan-Bin Wei for technical assistance.

supplementary crystallographic information

Comment

Methyl tetramates bearing C-5 methyl substituents are key frameworks found in a number of bioactive natural products, such as dysideapyrrolidone and dolastatin (Royles, 1995). The title compound, (1), is one of the methyl tetramates which were synthesized when we researched the flexible method for the preparation of methyl (S)-5-alkyltetramate derivatives.

The title compound, (1), was obtained by the reaction of (3S,7aR)-7a-hexyl-7-methoxy-3-phenyl-2,3- dihydropyrrolo[2,1-b]oxazol-5(7aH)-one and triethylsilane using titanium (IV) chloride as catalyst. The absolute configuration (S) of the stereocentre C6 remains unchanged during the synthetic procedure. An X-ray crystal structure determination of the molecular structure of compound (1) was carried out to determine its conformation.

The phenyl and dihydropyrrolone rings form a dihedral angle of 83.8 (1)°. O—H···O hydrogen-bonding interactions lead to the formation of a chain parallel to the a axis.

Experimental

The title compound was prepared by a method based on one described by Jiang et al. (2009). To a cooled (-78 °C) solution of (3S,7aR)-7a-hexyl-7-methoxy-3-phenyl-2,3-\ δihydropyrrolo[2,1-b]oxazol-5(7aH)-one (0.230 mmol) in dry dichloromethane (6 ml) was added dropwise a solution of TiCl4 (0.245 mmol), followed by Et3SiH (2.3 mmol) under nitrogen atmosphere. After being stirred at -78 °C for 2 h, the mixture was allowed to react at room temperature and stirred until the completion of the reaction. The mixture was quenched with saturated NaHCO3 solution. The organic layer was separated and the aqueous phase was extracted with CH2Cl2 (3 × 5 ml). The combined organic layers were washed with brine, dried over Na2SO4, and concentrated under reduced pressure. The residue was purified by flash chromatography to give (S)-5-hexyl-1-((S)- 2-hydroxy-1-phenylethyl)-4-methoxy-1H-pyrrol-2(5H)-one as colorless crystals. Single crystals were obtained by slow evaporation of a petroleum ether/ethyl acetate solution.

Refinement

The hydrogen atoms were positioned geometrically (O—H = 0.84Å; C—H = 0.93, 0.98, 0.97 or 0.96Å for phenyl, tertiary, methylene or methyl H atoms respectively) and were included in the refinement in the riding model approximation. The displacement parameters of methyl and hydroxyl H atoms were set to 1.5Ueq(C,O), while those of other H atoms were set to 1.2Ueq(C). In the absence of significant anomalous scattering, Friedel pairs were merged; the absolute configuration was known from the synthesis.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom-labeling scheme, showing 50% probability displacement ellipsoids. H atoms are drawn as spheres of arbitrary radius.

Crystal data

C19H27NO3 F(000) = 688
Mr = 317.42 Dx = 1.204 Mg m3
Orthorhombic, P212121 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2ab Cell parameters from 9516 reflections
a = 9.6739 (17) Å θ = 4.5–56.6°
b = 10.0995 (18) Å µ = 0.08 mm1
c = 17.929 (3) Å T = 173 K
V = 1751.7 (5) Å3 Needle, colorless
Z = 4 0.56 × 0.32 × 0.23 mm

Data collection

Bruker APEX CCD diffractometer 1773 independent reflections
Radiation source: fine-focus sealed tube 1732 reflections with I > 2σ(I)
graphite Rint = 0.023
φ and ω scans θmax = 25.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −11→11
Tmin = 0.956, Tmax = 0.982 k = −12→12
12545 measured reflections l = −21→20

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.079 H-atom parameters constrained
S = 1.13 w = 1/[σ2(Fo2) + (0.0483P)2 + 0.1818P] where P = (Fo2 + 2Fc2)/3
1773 reflections (Δ/σ)max < 0.001
208 parameters Δρmax = 0.13 e Å3
0 restraints Δρmin = −0.13 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N1 0.23084 (14) 0.27270 (13) 0.08925 (7) 0.0264 (3)
O2 0.01267 (12) 0.18490 (12) 0.08019 (6) 0.0339 (3)
C2 0.09444 (17) 0.26555 (17) 0.10656 (9) 0.0275 (4)
C3 0.06570 (18) 0.36770 (17) 0.16165 (9) 0.0314 (4)
H3A −0.0223 0.3883 0.1821 0.038*
O4 0.21692 (13) 0.52314 (12) 0.22535 (7) 0.0381 (3)
C4 0.18362 (19) 0.42683 (16) 0.17823 (9) 0.0300 (4)
C5 0.30022 (18) 0.37368 (17) 0.13261 (9) 0.0294 (4)
H5A 0.3699 0.3313 0.1662 0.035*
C6 0.31243 (16) 0.17097 (16) 0.05156 (9) 0.0271 (4)
H6A 0.4059 0.2102 0.0426 0.032*
O7 0.23907 (13) 0.24369 (13) −0.07171 (6) 0.0393 (3)
H7C 0.3167 0.2780 −0.0799 0.059*
C7 0.25486 (19) 0.13400 (18) −0.02451 (8) 0.0324 (4)
H7A 0.3177 0.0694 −0.0485 0.039*
H7B 0.1639 0.0906 −0.0179 0.039*
C8 0.33410 (18) 0.05271 (17) 0.10152 (9) 0.0293 (4)
C9 0.2319 (2) −0.04012 (17) 0.11356 (10) 0.0367 (4)
H9A 0.1459 −0.0318 0.0884 0.044*
C10 0.2528 (2) −0.14481 (19) 0.16160 (11) 0.0441 (5)
H10A 0.1815 −0.2081 0.1692 0.053*
C11 0.3763 (2) −0.1579 (2) 0.19852 (12) 0.0483 (5)
H11A 0.3907 −0.2297 0.2318 0.058*
C12 0.4785 (2) −0.0666 (2) 0.18692 (11) 0.0460 (5)
H12A 0.5640 −0.0751 0.2125 0.055*
C13 0.45838 (19) 0.03788 (19) 0.13829 (9) 0.0360 (4)
H13A 0.5307 0.0999 0.1301 0.043*
C14 0.37058 (18) 0.47889 (17) 0.08519 (10) 0.0329 (4)
H14A 0.4189 0.5416 0.1187 0.039*
H14B 0.4415 0.4355 0.0538 0.039*
C15 0.27425 (19) 0.55665 (18) 0.03513 (10) 0.0351 (4)
H15A 0.2164 0.4941 0.0063 0.042*
H15B 0.2120 0.6111 0.0664 0.042*
C16 0.3508 (2) 0.64551 (19) −0.01812 (11) 0.0401 (4)
H16A 0.4100 0.7065 0.0109 0.048*
H16B 0.4121 0.5905 −0.0497 0.048*
C17 0.2578 (2) 0.7259 (2) −0.06785 (10) 0.0421 (4)
H17A 0.2078 0.7914 −0.0368 0.050*
H17B 0.1881 0.6662 −0.0903 0.050*
C18 0.3319 (2) 0.79856 (19) −0.12980 (11) 0.0446 (5)
H18A 0.4007 0.8594 −0.1075 0.054*
H18B 0.3828 0.7334 −0.1606 0.054*
C19 0.2366 (2) 0.8770 (2) −0.17945 (11) 0.0494 (5)
H19A 0.2908 0.9214 −0.2183 0.074*
H19B 0.1877 0.9434 −0.1496 0.074*
H19C 0.1695 0.8173 −0.2027 0.074*
C20 0.1077 (2) 0.5705 (2) 0.27166 (10) 0.0457 (5)
H20A 0.1427 0.6411 0.3041 0.069*
H20B 0.0723 0.4977 0.3023 0.069*
H20C 0.0330 0.6054 0.2404 0.069*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N1 0.0263 (7) 0.0264 (7) 0.0263 (6) −0.0003 (6) 0.0015 (5) −0.0016 (6)
O2 0.0273 (6) 0.0347 (6) 0.0398 (6) −0.0034 (6) 0.0012 (5) 0.0020 (5)
C2 0.0272 (8) 0.0288 (8) 0.0264 (7) 0.0012 (7) −0.0001 (6) 0.0078 (7)
C3 0.0313 (8) 0.0318 (8) 0.0310 (8) 0.0057 (8) 0.0072 (7) 0.0056 (7)
O4 0.0436 (7) 0.0378 (7) 0.0329 (6) 0.0052 (6) 0.0017 (6) −0.0096 (5)
C4 0.0388 (9) 0.0287 (8) 0.0224 (7) 0.0058 (7) 0.0008 (7) 0.0018 (7)
C5 0.0290 (8) 0.0308 (8) 0.0284 (8) 0.0025 (7) −0.0025 (7) −0.0024 (7)
C6 0.0243 (8) 0.0289 (8) 0.0281 (8) 0.0003 (7) 0.0019 (6) −0.0037 (7)
O7 0.0343 (6) 0.0530 (8) 0.0307 (6) 0.0012 (6) −0.0036 (5) 0.0045 (6)
C7 0.0314 (8) 0.0381 (9) 0.0275 (8) −0.0015 (8) 0.0000 (7) −0.0037 (7)
C8 0.0313 (8) 0.0287 (8) 0.0278 (8) 0.0034 (7) 0.0031 (7) −0.0057 (7)
C9 0.0338 (9) 0.0325 (9) 0.0436 (9) 0.0001 (8) −0.0015 (8) −0.0013 (8)
C10 0.0493 (11) 0.0299 (9) 0.0532 (11) −0.0018 (9) 0.0058 (10) 0.0034 (8)
C11 0.0597 (13) 0.0384 (10) 0.0468 (11) 0.0123 (10) 0.0018 (10) 0.0090 (9)
C12 0.0426 (11) 0.0520 (11) 0.0433 (10) 0.0109 (10) −0.0065 (9) 0.0057 (10)
C13 0.0341 (9) 0.0378 (9) 0.0360 (8) 0.0014 (8) −0.0007 (7) −0.0018 (8)
C14 0.0284 (8) 0.0334 (9) 0.0370 (9) −0.0021 (8) 0.0019 (7) −0.0065 (7)
C15 0.0346 (9) 0.0349 (9) 0.0358 (8) −0.0044 (8) 0.0029 (8) −0.0008 (7)
C16 0.0397 (10) 0.0374 (10) 0.0433 (10) −0.0016 (8) 0.0088 (8) 0.0020 (8)
C17 0.0441 (11) 0.0431 (10) 0.0390 (9) −0.0063 (9) 0.0020 (9) 0.0034 (8)
C18 0.0523 (11) 0.0360 (9) 0.0455 (10) 0.0029 (9) 0.0133 (9) 0.0044 (9)
C19 0.0588 (13) 0.0482 (11) 0.0413 (10) −0.0072 (11) −0.0008 (10) 0.0069 (9)
C20 0.0594 (12) 0.0422 (10) 0.0355 (9) 0.0112 (10) 0.0099 (9) −0.0067 (8)

Geometric parameters (Å, °)

N1—C2 1.357 (2) C11—H11A 0.9500
N1—C5 1.447 (2) C12—C13 1.383 (3)
N1—C6 1.461 (2) C12—H12A 0.9500
O2—C2 1.230 (2) C13—H13A 0.9500
C2—C3 1.455 (2) C14—C15 1.513 (3)
C3—C4 1.321 (3) C14—H14A 0.9900
C3—H3A 0.9500 C14—H14B 0.9900
O4—C4 1.328 (2) C15—C16 1.505 (2)
O4—C20 1.426 (2) C15—H15A 0.9900
C4—C5 1.493 (2) C15—H15B 0.9900
C5—C14 1.522 (2) C16—C17 1.505 (3)
C5—H5A 1.0000 C16—H16A 0.9900
C6—C8 1.508 (2) C16—H16B 0.9900
C6—C7 1.520 (2) C17—C18 1.512 (3)
C6—H6A 1.0000 C17—H17A 0.9900
O7—C7 1.402 (2) C17—H17B 0.9900
O7—H7C 0.8400 C18—C19 1.507 (3)
C7—H7A 0.9900 C18—H18A 0.9900
C7—H7B 0.9900 C18—H18B 0.9900
C8—C13 1.379 (2) C19—H19A 0.9800
C8—C9 1.380 (2) C19—H19B 0.9800
C9—C10 1.379 (3) C19—H19C 0.9800
C9—H9A 0.9500 C20—H20A 0.9800
C10—C11 1.372 (3) C20—H20B 0.9800
C10—H10A 0.9500 C20—H20C 0.9800
C11—C12 1.368 (3)
C2—N1—C5 111.43 (14) C13—C12—H12A 119.7
C2—N1—C6 126.40 (14) C8—C13—C12 120.46 (18)
C5—N1—C6 119.56 (13) C8—C13—H13A 119.8
O2—C2—N1 124.93 (16) C12—C13—H13A 119.8
O2—C2—C3 127.41 (15) C15—C14—C5 114.73 (14)
N1—C2—C3 107.65 (15) C15—C14—H14A 108.6
C4—C3—C2 107.94 (15) C5—C14—H14A 108.6
C4—C3—H3A 126.0 C15—C14—H14B 108.6
C2—C3—H3A 126.0 C5—C14—H14B 108.6
C4—O4—C20 115.87 (15) H14A—C14—H14B 107.6
C3—C4—O4 133.12 (16) C16—C15—C14 112.50 (15)
C3—C4—C5 111.50 (14) C16—C15—H15A 109.1
O4—C4—C5 115.37 (15) C14—C15—H15A 109.1
N1—C5—C4 101.38 (13) C16—C15—H15B 109.1
N1—C5—C14 113.54 (13) C14—C15—H15B 109.1
C4—C5—C14 113.14 (14) H15A—C15—H15B 107.8
N1—C5—H5A 109.5 C17—C16—C15 113.79 (16)
C4—C5—H5A 109.5 C17—C16—H16A 108.8
C14—C5—H5A 109.5 C15—C16—H16A 108.8
N1—C6—C8 110.93 (12) C17—C16—H16B 108.8
N1—C6—C7 112.95 (13) C15—C16—H16B 108.8
C8—C6—C7 112.93 (13) H16A—C16—H16B 107.7
N1—C6—H6A 106.5 C16—C17—C18 114.42 (17)
C8—C6—H6A 106.5 C16—C17—H17A 108.7
C7—C6—H6A 106.5 C18—C17—H17A 108.7
C7—O7—H7C 109.5 C16—C17—H17B 108.7
O7—C7—C6 112.79 (13) C18—C17—H17B 108.7
O7—C7—H7A 109.0 H17A—C17—H17B 107.6
C6—C7—H7A 109.0 C19—C18—C17 113.52 (18)
O7—C7—H7B 109.0 C19—C18—H18A 108.9
C6—C7—H7B 109.0 C17—C18—H18A 108.9
H7A—C7—H7B 107.8 C19—C18—H18B 108.9
C13—C8—C9 118.44 (16) C17—C18—H18B 108.9
C13—C8—C6 119.42 (16) H18A—C18—H18B 107.7
C9—C8—C6 122.11 (16) C18—C19—H19A 109.5
C10—C9—C8 120.91 (18) C18—C19—H19B 109.5
C10—C9—H9A 119.5 H19A—C19—H19B 109.5
C8—C9—H9A 119.5 C18—C19—H19C 109.5
C11—C10—C9 120.20 (19) H19A—C19—H19C 109.5
C11—C10—H10A 119.9 H19B—C19—H19C 109.5
C9—C10—H10A 119.9 O4—C20—H20A 109.5
C12—C11—C10 119.41 (18) O4—C20—H20B 109.5
C12—C11—H11A 120.3 H20A—C20—H20B 109.5
C10—C11—H11A 120.3 O4—C20—H20C 109.5
C11—C12—C13 120.57 (19) H20A—C20—H20C 109.5
C11—C12—H12A 119.7 H20B—C20—H20C 109.5
C5—N1—C2—O2 −176.98 (14) C5—N1—C6—C7 −142.17 (14)
C6—N1—C2—O2 −15.5 (3) N1—C6—C7—O7 55.07 (19)
C5—N1—C2—C3 2.15 (18) C8—C6—C7—O7 −178.04 (14)
C6—N1—C2—C3 163.58 (13) N1—C6—C8—C13 −100.67 (18)
O2—C2—C3—C4 175.95 (16) C7—C6—C8—C13 131.38 (16)
N1—C2—C3—C4 −3.15 (18) N1—C6—C8—C9 77.47 (18)
C2—C3—C4—O4 −178.40 (17) C7—C6—C8—C9 −50.5 (2)
C2—C3—C4—C5 2.92 (19) C13—C8—C9—C10 0.5 (3)
C20—O4—C4—C3 4.1 (3) C6—C8—C9—C10 −177.68 (16)
C20—O4—C4—C5 −177.24 (15) C8—C9—C10—C11 0.2 (3)
C2—N1—C5—C4 −0.46 (17) C9—C10—C11—C12 −0.3 (3)
C6—N1—C5—C4 −163.32 (13) C10—C11—C12—C13 −0.2 (3)
C2—N1—C5—C14 −122.12 (15) C9—C8—C13—C12 −1.0 (3)
C6—N1—C5—C14 75.02 (18) C6—C8—C13—C12 177.17 (16)
C3—C4—C5—N1 −1.61 (18) C11—C12—C13—C8 0.9 (3)
O4—C4—C5—N1 179.46 (13) N1—C5—C14—C15 60.86 (19)
C3—C4—C5—C14 120.33 (16) C4—C5—C14—C15 −53.98 (19)
O4—C4—C5—C14 −58.60 (19) C5—C14—C15—C16 −171.94 (15)
C2—N1—C6—C8 −70.19 (19) C14—C15—C16—C17 −179.05 (15)
C5—N1—C6—C8 89.88 (17) C15—C16—C17—C18 −170.57 (17)
C2—N1—C6—C7 57.8 (2) C16—C17—C18—C19 179.28 (17)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O7—H7C···O2i 0.84 1.93 2.7475 (18) 163

Symmetry codes: (i) x+1/2, −y+1/2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT2921).

References

  1. Bruker (2001). SAINT, SMART and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  3. Jiang, L. J., Lan, H. Q., Zheng, J. F., Ye, J.-L. & Huang, P. Q. (2009). Synlett. pp. 297–301.
  4. Royles, B. J. L. (1995). Chem. Rev.95, 1981–2001.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809014160/bt2921sup1.cif

e-65-o1094-sup1.cif (20.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809014160/bt2921Isup2.hkl

e-65-o1094-Isup2.hkl (87.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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