Abstract
The title compound, C15H13N3O4, was synthesized from dimethyl 1H-pyrazole-3,5-dicarboxylate and 4-(bromomethyl)benzonitrile. The interplanar angle between the pyrazole and cyanobenzyl ring planes is 71.74 (17)° and an intramolecular C—H⋯O interaction occurs. The crystal structure is stabilized by π–π stacking interactions between the neighbouring pyrazole and benzene rings [centroid–centroid distances of 3.5074 (16) and 3.9401 (15) Å, respectively]. One of the methyl groups is disordered over two positions of equal occupancy.
Related literature
For the biological activity of pyrazoles, see: Chambers et al. (1985 ▶); Lee et al. (1989 ▶). Nitrile derivatives are important materials in the synthesis of some heterocyclic molecules (Radl et al., 2000 ▶). For related structures, see: Dai et al. (2008 ▶); Fu & Zhao (2007 ▶); Xiao & Zhao (2008a
▶,b
▶,c
▶).
Experimental
Crystal data
C15H13N3O4
M r = 299.28
Triclinic,
a = 7.4981 (13) Å
b = 9.1753 (9) Å
c = 12.2884 (18) Å
α = 69.820 (5)°
β = 88.900 (6)°
γ = 68.818 (5)°
V = 734.51 (18) Å3
Z = 2
Mo Kα radiation
μ = 0.10 mm−1
T = 292 K
0.35 × 0.30 × 0.25 mm
Data collection
Rigaku SCXmini diffractometer
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.968, T max = 0.975
7543 measured reflections
3330 independent reflections
1972 reflections with I > 2σ(I)
R int = 0.038
Refinement
R[F 2 > 2σ(F 2)] = 0.060
wR(F 2) = 0.161
S = 1.03
3330 reflections
202 parameters
H-atom parameters constrained
Δρmax = 0.26 e Å−3
Δρmin = −0.15 e Å−3
Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809015578/fb2152sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809015578/fb2152Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C6—H6A⋯O2 | 0.97 | 2.38 | 2.966 (3) | 119 |
| C14—H14A⋯O4i | 0.96 | 2.41 | 3.312 (4) | 156 |
Symmetry code: (i)
.
Acknowledgments
This work was supported financially by Southeast University for Young Researchers (4007041027).
supplementary crystallographic information
Comment
Pyrazole-related molecules have attracted considerable attention due to their biological activities (Lee et al., 1989; Chambers et al., 1985). In addition, the nitrile derivatives are important materials in the synthesis of some heterocyclic molecules (Radl et al., 2000). Recently, we have reported a few benzonitrile compounds (Dai et al.,2008; Fu et al., 2007; Xiao et al.,2008a, 2008b 2008c). As an extension of our work on the structural characterization of the nitrile compounds, the structure of the title compound is reported here. The bond lengths and angles have normal values. The interplanar angle between the pyrazole and cyanobenzyloxy ring planes is 71.74 (17) °. The crystal structure is stabilized by week interactions: C—H···O interactions, C—H···π-electron ring interactions (Tab. 1) and π-π-electron ring stacking interactions (Tab. 2).
Experimental
1H-pyrazole-3,5-dicarboxylic acid dimethyl ester (0.185 mg, 1 mmol) and 4-(bromomethyl)benzonitrile (0.196 mg, 1 mmol) were dissolved in acetone (10 ml) in the presence of K2CO3 (0.138 mg, 1 mmol) and heated under reflux for 1 day. After the mixture had been cooled to room temperature, the solution was filtered and the solvent removed in vacuum to afford a white precipitate of the title compound. Colourless prisms (average size: 0.8×1.2×1.0 mm) suitable for X-ray diffraction were obtained by slow evaporation in 7 days from a solution of 100 mg of the crude product in 15 ml of diethylether.
Refinement
All the hydrogens were discernible in the difference electron density maps. In the case of the methyl C14 the corresponding triplet of maxima was broad with shallow saddles between them. All the hydrogens were situated into the idealized positions and those of C14 were modelled as disordered with two triplets of the hydrogens with equal occupation rotated by 60° to each other. The hydrogens were treated in the riding mode approximation: Caryl-H, Cmethylene-H, Cmethyl-H = 0.93, 097 and 0.96 Å, respectively. Uiso(Haryl)=1.2Ueq(Caryl); Uiso(Hmethylene)=1.2Ueq(Cmethylene); Uiso(Hmethyl)=1.5Ueq(Cmethyl).
Figures
Fig. 1.
The structure of the title molecule, showing the atomic numbering scheme. The displacement ellipsoids are drawn at the 30% probability level.
Crystal data
| C15H13N3O4 | Z = 2 |
| Mr = 299.28 | F(000) = 312 |
| Triclinic, P1 | Dx = 1.353 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.4981 (13) Å | Cell parameters from 1468 reflections |
| b = 9.1753 (9) Å | θ = 2.6–27.4° |
| c = 12.2884 (18) Å | µ = 0.10 mm−1 |
| α = 69.820 (5)° | T = 292 K |
| β = 88.900 (6)° | Prism, colourless |
| γ = 68.818 (5)° | 0.35 × 0.30 × 0.25 mm |
| V = 734.51 (18) Å3 |
Data collection
| Rigaku SCXmini diffractometer | 3330 independent reflections |
| Radiation source: fine-focus sealed tube | 1972 reflections with I > 2σ(I) |
| graphite | Rint = 0.038 |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.4°, θmin = 2.9° |
| ω scans | h = −9→9 |
| Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −11→11 |
| Tmin = 0.968, Tmax = 0.975 | l = −15→15 |
| 7543 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.060 | H-atom parameters constrained |
| wR(F2) = 0.161 | w = 1/[σ2(Fo2) + (0.0703P)2 + 0.0489P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.03 | (Δ/σ)max < 0.001 |
| 3330 reflections | Δρmax = 0.26 e Å−3 |
| 202 parameters | Δρmin = −0.15 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 62 constraints | Extinction coefficient: 0.023 (5) |
| Primary atom site location: structure-invariant direct methods |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| O1 | 0.5650 (2) | −0.3342 (2) | 0.04531 (15) | 0.0655 (5) | |
| O2 | 0.5168 (3) | −0.3555 (2) | 0.22929 (16) | 0.0819 (6) | |
| O3 | 0.0543 (3) | 0.2623 (2) | −0.24779 (14) | 0.0728 (5) | |
| O4 | −0.1136 (3) | 0.4051 (2) | −0.14182 (15) | 0.0793 (6) | |
| N1 | 0.2237 (2) | −0.0155 (2) | 0.13109 (15) | 0.0491 (5) | |
| N2 | 0.0980 (2) | 0.1342 (2) | 0.06034 (16) | 0.0503 (5) | |
| N3 | 0.8678 (4) | 0.2304 (3) | 0.4352 (3) | 0.0966 (9) | |
| C1 | 0.3321 (3) | −0.1079 (3) | 0.06994 (19) | 0.0468 (5) | |
| C2 | 0.2698 (3) | −0.0139 (3) | −0.04608 (18) | 0.0479 (5) | |
| H2 | 0.3143 | −0.0430 | −0.1098 | 0.057* | |
| C3 | 0.1264 (3) | 0.1341 (3) | −0.04801 (19) | 0.0472 (5) | |
| C4 | 0.4791 (3) | −0.2778 (3) | 0.1258 (2) | 0.0530 (6) | |
| C5 | 0.0081 (3) | 0.2824 (3) | −0.1475 (2) | 0.0515 (6) | |
| C6 | 0.2365 (3) | −0.0489 (3) | 0.25677 (19) | 0.0550 (6) | |
| H6A | 0.2761 | −0.1686 | 0.2991 | 0.066* | |
| H6B | 0.1102 | 0.0062 | 0.2765 | 0.066* | |
| C7 | 0.3779 (3) | 0.0122 (3) | 0.29447 (18) | 0.0479 (5) | |
| C8 | 0.3384 (3) | 0.1819 (3) | 0.2585 (2) | 0.0576 (6) | |
| H8 | 0.2252 | 0.2581 | 0.2104 | 0.069* | |
| C9 | 0.4644 (3) | 0.2392 (3) | 0.2932 (2) | 0.0581 (6) | |
| H9 | 0.4368 | 0.3538 | 0.2687 | 0.070* | |
| C10 | 0.6333 (3) | 0.1255 (3) | 0.36490 (19) | 0.0529 (6) | |
| C11 | 0.6731 (3) | −0.0434 (3) | 0.4016 (2) | 0.0588 (6) | |
| H11 | 0.7857 | −0.1197 | 0.4504 | 0.071* | |
| C12 | 0.5455 (3) | −0.1000 (3) | 0.36587 (19) | 0.0548 (6) | |
| H12 | 0.5731 | −0.2146 | 0.3902 | 0.066* | |
| C13 | 0.7641 (4) | 0.1848 (3) | 0.4034 (2) | 0.0678 (7) | |
| C14 | 0.7145 (4) | −0.5000 (3) | 0.0858 (3) | 0.0785 (8) | |
| H14A | 0.7910 | −0.5143 | 0.0239 | 0.118* | 0.50 |
| H14B | 0.6569 | −0.5824 | 0.1090 | 0.118* | 0.50 |
| H14C | 0.7949 | −0.5136 | 0.1512 | 0.118* | 0.50 |
| H14D | 0.7042 | −0.5592 | 0.1655 | 0.118* | 0.50 |
| H14E | 0.8383 | −0.4911 | 0.0804 | 0.118* | 0.50 |
| H14F | 0.7003 | −0.5600 | 0.0382 | 0.118* | 0.50 |
| C15 | −0.0426 (5) | 0.4051 (3) | −0.3519 (2) | 0.0935 (10) | |
| H15A | −0.1784 | 0.4472 | −0.3465 | 0.140* | |
| H15B | −0.0203 | 0.3722 | −0.4187 | 0.140* | |
| H15C | 0.0063 | 0.4912 | −0.3600 | 0.140* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0637 (10) | 0.0628 (11) | 0.0658 (11) | −0.0157 (9) | 0.0118 (8) | −0.0270 (9) |
| O2 | 0.0996 (15) | 0.0687 (12) | 0.0564 (12) | −0.0095 (10) | −0.0079 (10) | −0.0207 (10) |
| O3 | 0.0945 (13) | 0.0599 (11) | 0.0487 (10) | −0.0175 (9) | 0.0097 (9) | −0.0142 (9) |
| O4 | 0.0846 (13) | 0.0677 (12) | 0.0629 (12) | −0.0017 (10) | −0.0013 (10) | −0.0251 (10) |
| N1 | 0.0473 (10) | 0.0587 (11) | 0.0463 (11) | −0.0240 (9) | 0.0023 (8) | −0.0206 (9) |
| N2 | 0.0470 (10) | 0.0549 (11) | 0.0505 (11) | −0.0196 (9) | 0.0001 (9) | −0.0201 (9) |
| N3 | 0.0848 (18) | 0.0871 (18) | 0.114 (2) | −0.0326 (15) | −0.0303 (16) | −0.0297 (16) |
| C1 | 0.0425 (11) | 0.0548 (13) | 0.0514 (13) | −0.0252 (10) | 0.0057 (10) | −0.0218 (11) |
| C2 | 0.0472 (12) | 0.0558 (13) | 0.0479 (13) | −0.0250 (11) | 0.0070 (10) | −0.0216 (11) |
| C3 | 0.0470 (12) | 0.0546 (13) | 0.0464 (12) | −0.0260 (11) | 0.0028 (10) | −0.0186 (10) |
| C4 | 0.0532 (13) | 0.0561 (14) | 0.0552 (15) | −0.0251 (11) | 0.0009 (11) | −0.0217 (12) |
| C5 | 0.0556 (13) | 0.0526 (13) | 0.0524 (14) | −0.0250 (12) | 0.0041 (11) | −0.0213 (11) |
| C6 | 0.0576 (14) | 0.0660 (15) | 0.0458 (13) | −0.0274 (12) | 0.0074 (11) | −0.0210 (11) |
| C7 | 0.0491 (12) | 0.0580 (13) | 0.0382 (12) | −0.0194 (10) | 0.0045 (9) | −0.0201 (10) |
| C8 | 0.0542 (14) | 0.0533 (14) | 0.0529 (14) | −0.0120 (11) | −0.0119 (11) | −0.0127 (11) |
| C9 | 0.0589 (14) | 0.0514 (13) | 0.0596 (15) | −0.0179 (11) | −0.0050 (12) | −0.0176 (11) |
| C10 | 0.0506 (13) | 0.0596 (14) | 0.0501 (13) | −0.0184 (11) | 0.0016 (11) | −0.0243 (11) |
| C11 | 0.0503 (13) | 0.0623 (15) | 0.0535 (14) | −0.0091 (11) | −0.0097 (11) | −0.0210 (12) |
| C12 | 0.0565 (14) | 0.0491 (13) | 0.0527 (14) | −0.0123 (11) | −0.0022 (11) | −0.0188 (11) |
| C13 | 0.0599 (15) | 0.0705 (17) | 0.0711 (18) | −0.0220 (14) | −0.0092 (13) | −0.0254 (14) |
| C14 | 0.0675 (17) | 0.0608 (16) | 0.099 (2) | −0.0087 (14) | 0.0076 (15) | −0.0363 (16) |
| C15 | 0.143 (3) | 0.0669 (18) | 0.0445 (15) | −0.0241 (19) | 0.0060 (17) | −0.0054 (14) |
Geometric parameters (Å, °)
| O1—C4 | 1.323 (3) | C7—C8 | 1.380 (3) |
| O1—C14 | 1.445 (3) | C8—C9 | 1.371 (3) |
| O2—C4 | 1.203 (3) | C8—H8 | 0.9300 |
| O3—C5 | 1.330 (3) | C9—C10 | 1.386 (3) |
| O3—C15 | 1.440 (3) | C9—H9 | 0.9300 |
| O4—C5 | 1.189 (3) | C10—C11 | 1.373 (3) |
| N1—N2 | 1.343 (2) | C10—C13 | 1.436 (3) |
| N1—C1 | 1.364 (3) | C11—C12 | 1.382 (3) |
| N1—C6 | 1.465 (3) | C11—H11 | 0.9300 |
| N2—C3 | 1.345 (3) | C12—H12 | 0.9300 |
| N3—C13 | 1.136 (3) | C14—H14A | 0.9600 |
| C1—C2 | 1.371 (3) | C14—H14B | 0.9600 |
| C1—C4 | 1.471 (3) | C14—H14C | 0.9600 |
| C2—C3 | 1.387 (3) | C14—H14D | 0.9600 |
| C2—H2 | 0.9300 | C14—H14E | 0.9600 |
| C3—C5 | 1.468 (3) | C14—H14F | 0.9600 |
| C6—C7 | 1.510 (3) | C15—H15A | 0.9600 |
| C6—H6A | 0.9700 | C15—H15B | 0.9600 |
| C6—H6B | 0.9700 | C15—H15C | 0.9600 |
| C7—C12 | 1.376 (3) | ||
| C4—O1—C14 | 117.1 (2) | C11—C10—C13 | 120.0 (2) |
| C5—O3—C15 | 115.7 (2) | C9—C10—C13 | 119.9 (2) |
| N2—N1—C1 | 112.02 (17) | C10—C11—C12 | 119.9 (2) |
| N2—N1—C6 | 117.49 (18) | C10—C11—H11 | 120.1 |
| C1—N1—C6 | 130.25 (19) | C12—C11—H11 | 120.1 |
| N1—N2—C3 | 104.47 (18) | C7—C12—C11 | 120.3 (2) |
| N1—C1—C2 | 106.61 (19) | C7—C12—H12 | 119.8 |
| N1—C1—C4 | 123.3 (2) | C11—C12—H12 | 119.8 |
| C2—C1—C4 | 130.0 (2) | N3—C13—C10 | 179.2 (3) |
| C1—C2—C3 | 105.17 (19) | O1—C14—H14A | 109.5 |
| C1—C2—H2 | 127.4 | O1—C14—H14B | 109.5 |
| C3—C2—H2 | 127.4 | H14A—C14—H14B | 109.5 |
| N2—C3—C2 | 111.72 (19) | O1—C14—H14C | 109.5 |
| N2—C3—C5 | 118.3 (2) | H14A—C14—H14C | 109.5 |
| C2—C3—C5 | 130.0 (2) | H14B—C14—H14C | 109.5 |
| O2—C4—O1 | 124.4 (2) | O1—C14—H14D | 109.5 |
| O2—C4—C1 | 125.6 (2) | H14A—C14—H14D | 141.1 |
| O1—C4—C1 | 110.0 (2) | H14B—C14—H14D | 56.3 |
| O4—C5—O3 | 123.3 (2) | H14C—C14—H14D | 56.3 |
| O4—C5—C3 | 126.0 (2) | O1—C14—H14E | 109.5 |
| O3—C5—C3 | 110.7 (2) | H14A—C14—H14E | 56.3 |
| N1—C6—C7 | 112.00 (17) | H14B—C14—H14E | 141.1 |
| N1—C6—H6A | 109.2 | H14C—C14—H14E | 56.3 |
| C7—C6—H6A | 109.2 | H14D—C14—H14E | 109.5 |
| N1—C6—H6B | 109.2 | O1—C14—H14F | 109.5 |
| C7—C6—H6B | 109.2 | H14A—C14—H14F | 56.3 |
| H6A—C6—H6B | 107.9 | H14B—C14—H14F | 56.3 |
| C12—C7—C8 | 119.4 (2) | H14C—C14—H14F | 141.1 |
| C12—C7—C6 | 120.5 (2) | H14D—C14—H14F | 109.5 |
| C8—C7—C6 | 120.0 (2) | H14E—C14—H14F | 109.5 |
| C9—C8—C7 | 120.6 (2) | O3—C15—H15A | 109.5 |
| C9—C8—H8 | 119.7 | O3—C15—H15B | 109.5 |
| C7—C8—H8 | 119.7 | H15A—C15—H15B | 109.5 |
| C8—C9—C10 | 119.6 (2) | O3—C15—H15C | 109.5 |
| C8—C9—H9 | 120.2 | H15A—C15—H15C | 109.5 |
| C10—C9—H9 | 120.2 | H15B—C15—H15C | 109.5 |
| C11—C10—C9 | 120.1 (2) | ||
| C1—N1—N2—C3 | 1.0 (2) | C15—O3—C5—C3 | −175.6 (2) |
| C6—N1—N2—C3 | 175.97 (16) | N2—C3—C5—O4 | −0.4 (3) |
| N2—N1—C1—C2 | −1.3 (2) | C2—C3—C5—O4 | 179.6 (2) |
| C6—N1—C1—C2 | −175.37 (19) | N2—C3—C5—O3 | 179.86 (18) |
| N2—N1—C1—C4 | −179.11 (18) | C2—C3—C5—O3 | −0.1 (3) |
| C6—N1—C1—C4 | 6.8 (3) | N2—N1—C6—C7 | −87.3 (2) |
| N1—C1—C2—C3 | 0.9 (2) | C1—N1—C6—C7 | 86.6 (3) |
| C4—C1—C2—C3 | 178.6 (2) | N1—C6—C7—C12 | −113.0 (2) |
| N1—N2—C3—C2 | −0.4 (2) | N1—C6—C7—C8 | 67.8 (3) |
| N1—N2—C3—C5 | 179.58 (17) | C12—C7—C8—C9 | 0.1 (4) |
| C1—C2—C3—N2 | −0.3 (2) | C6—C7—C8—C9 | 179.2 (2) |
| C1—C2—C3—C5 | 179.7 (2) | C7—C8—C9—C10 | 0.1 (4) |
| C14—O1—C4—O2 | −0.4 (3) | C8—C9—C10—C11 | −0.5 (4) |
| C14—O1—C4—C1 | 179.79 (19) | C8—C9—C10—C13 | −178.8 (2) |
| N1—C1—C4—O2 | 2.2 (4) | C9—C10—C11—C12 | 0.7 (4) |
| C2—C1—C4—O2 | −175.2 (2) | C13—C10—C11—C12 | 179.0 (2) |
| N1—C1—C4—O1 | −177.99 (18) | C8—C7—C12—C11 | 0.2 (3) |
| C2—C1—C4—O1 | 4.7 (3) | C6—C7—C12—C11 | −179.0 (2) |
| C15—O3—C5—O4 | 4.7 (4) | C10—C11—C12—C7 | −0.6 (4) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C6—H6A···O2 | 0.97 | 2.38 | 2.966 (3) | 119 |
| C14—H14A···O4i | 0.96 | 2.41 | 3.312 (4) | 156 |
| C2—H2···Cg2ii | 0.93 | 3.04 | 3.952 (3) | 166 |
Symmetry codes: (i) x+1, y−1, z; (ii) −x+1, −y, −z.
Table 2 π-π interactions in the title compound. α is the interplanar angle, DCC is the length of the vector centroid to centroid - CC), τ is the angle subtended by the plane normal to CC. Cg1 is the centroid of the ring N1\N2\C3\C2\C1; Cg2 is the centroid of the ring C7\C8\C9\C10\C11\C12.
| Ring 1 | Ring 2 | α (°) | DCC (Å) | τ (°) |
| Cg1 | Cg1iii | 0.00 | 3.5074 (16) | 18.75 |
| Cg2 | Cg2iv | 0.00 | 3.9401 (15) | 28.26 |
Symmetry codes: (iii) -x, -y, -z; (iv) 1-x, -y, 1-z
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FB2152).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809015578/fb2152sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536809015578/fb2152Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

