Abstract
The title compound, C20H20Br2ClN3O3, was synthesized by the condensation reaction of 2-chloro-5-nitrobenzaldehyde with 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol in a methanol solution. There are two independent molecules in the asymmetric unit and in one molecule the atoms of the cyclohexane ring are disordered over two sets of sites with refined occupancies of 0.657 (12) and 0.343 (12). The dihedral angle between the two benzene rings is 89.5 (2)° in one molecule and 82.9 (2)° in the other. In the crystal structure, intermolecular N—H⋯O and O—H⋯O hydrogen bonds link the molecules into chains propagating along [01
].
Related literature
For details of the pharmaceutical uses of Ambroxol, systematic name 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol, a compound closely related to the title compound see: Felix et al. (2008 ▶); Gaida et al. (2005 ▶); Lee et al. (2004 ▶). For a related structure, see: Wang et al. (2009 ▶). For standard bond-length data, see: Allen et al. (1987 ▶).
Experimental
Crystal data
C20H20Br2ClN3O3
M r = 545.66
Triclinic,
a = 10.2614 (13) Å
b = 13.1418 (17) Å
c = 16.931 (2) Å
α = 83.764 (2)°
β = 73.309 (2)°
γ = 84.750 (2)°
V = 2169.8 (5) Å3
Z = 4
Mo Kα radiation
μ = 3.89 mm−1
T = 298 K
0.30 × 0.28 × 0.28 mm
Data collection
Bruker SMART CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.389, T max = 0.409
11972 measured reflections
8470 independent reflections
4874 reflections with I > 2σ(I)
R int = 0.022
Refinement
R[F 2 > 2σ(F 2)] = 0.055
wR(F 2) = 0.154
S = 1.02
8470 reflections
578 parameters
122 restraints
H-atom parameters constrained
Δρmax = 1.56 e Å−3
Δρmin = −1.07 e Å−3
Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015023/lh5014sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015023/lh5014Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N3—H3N⋯O4i | 0.86 | 2.33 | 2.942 (7) | 129 |
| O3—H3⋯O6′ii | 0.84 | 1.89 | 2.713 (12) | 166 |
| O6—H6⋯O3iii | 0.84 | 2.04 | 2.877 (17) | 179 |
| O6′—H6′⋯O3iii | 0.84 | 1.85 | 2.694 (10) | 179 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
Financial support from the Third Affiliated Hospital of Soochow University is acknowledged.
supplementary crystallographic information
Comment
Ambroxol, 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol, is an expectorant agent which leads to bronchial secretion due to its mucolytic properties (Felix et al., 2008; Gaida et al., 2005; Lee et al., 2004). Recently, we reported the crystal structure of a derivative of Ambroxol (Wang et al., 2009). In this paper, the crystal structure of the title compound, derived from the condensation reaction of 2-chloro-5-nitrobenzaldehyde with 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol in methanol solution, is reported.
There are two independent molecules in the asymmetric unit of the title compound, Fig. 1. The dihedral angle between the two benzene rings is 89.5 (2)° in one molecule and 82.9 (2)° in the other. The cyclohexyl rings adopt chair configurations. All bond lengths are within normal ranges (Allen et al., 1987).
Experimental
2-Chloro-5-nitrobenzaldehyde (1.0 mol, 185.6 mg) and 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol (1.0 mmol, 378.1 mg) were dissolved in a methanol solution (30 ml). The mixture was stirred at room temperature to give a clear colorless solution. Crystals of the title compound were formed by gradual evaporation of the solvent for a week at room temperature.
Refinement
H atoms were included in calulated positions with, with C–H = 0.93–0.98 Å, N-H = 0.86Å and O-H = 0.84 with Uiso(H) = 1.2Ueq(C,N) or 1.5Ueq(O). The C29-C34 cyclohexyl ring is disordered over two distinct sites, with refined occupancies of 0.657 (12) and 0.343 (12). Bond length restraints were applied to the disorder model using the SADI commmand in SHELXL (Sheldrick, 2008).
Figures
Fig. 1.
The asymmetric unit of the title compound showing 30% probability ellipsoids. H atoms bonded to C atoms are not shown.
Crystal data
| C20H20Br2ClN3O3 | Z = 4 |
| Mr = 545.66 | F(000) = 1088 |
| Triclinic, P1 | Dx = 1.670 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 10.2614 (13) Å | Cell parameters from 2646 reflections |
| b = 13.1418 (17) Å | θ = 2.5–24.5° |
| c = 16.931 (2) Å | µ = 3.89 mm−1 |
| α = 83.764 (2)° | T = 298 K |
| β = 73.309 (2)° | Block, colorless |
| γ = 84.750 (2)° | 0.30 × 0.28 × 0.28 mm |
| V = 2169.8 (5) Å3 |
Data collection
| Bruker SMART CCD area-detector diffractometer | 8470 independent reflections |
| Radiation source: fine-focus sealed tube | 4874 reflections with I > 2σ(I) |
| graphite | Rint = 0.022 |
| ω scans | θmax = 26.2°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→7 |
| Tmin = 0.389, Tmax = 0.409 | k = −15→16 |
| 11972 measured reflections | l = −21→20 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.055 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.154 | H-atom parameters constrained |
| S = 1.02 | w = 1/[σ2(Fo2) + (0.0631P)2 + 2.7275P] where P = (Fo2 + 2Fc2)/3 |
| 8470 reflections | (Δ/σ)max = 0.001 |
| 578 parameters | Δρmax = 1.56 e Å−3 |
| 122 restraints | Δρmin = −1.06 e Å−3 |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| Br1 | 0.39058 (9) | −0.05133 (6) | 0.42693 (4) | 0.0888 (3) | |
| Br2 | −0.06018 (7) | 0.08773 (7) | 0.30819 (7) | 0.1156 (4) | |
| Br3 | 0.65212 (7) | 0.61194 (6) | 0.35191 (6) | 0.0919 (3) | |
| Br4 | 0.59092 (6) | 0.18627 (5) | 0.36046 (5) | 0.0747 (2) | |
| Cl1 | 0.87128 (15) | −0.09542 (13) | 0.01005 (10) | 0.0700 (4) | |
| Cl2 | −0.17164 (14) | 0.27481 (12) | 0.47738 (9) | 0.0628 (4) | |
| O1 | 0.4691 (6) | −0.4725 (4) | 0.1616 (4) | 0.133 (3) | |
| O2 | 0.3509 (5) | −0.3554 (4) | 0.2309 (4) | 0.0953 (16) | |
| O3 | 0.8184 (5) | 0.4244 (3) | 0.0419 (3) | 0.0816 (14) | |
| H3 | 0.8561 | 0.4573 | −0.0030 | 0.122* | |
| O4 | 0.2375 (7) | 0.1609 (5) | 0.7120 (4) | 0.119 (2) | |
| O5 | 0.0491 (7) | 0.1570 (6) | 0.8042 (4) | 0.145 (3) | |
| N1 | 0.4516 (6) | −0.3856 (4) | 0.1802 (4) | 0.0731 (15) | |
| N2 | 0.5854 (4) | 0.0384 (3) | 0.0978 (3) | 0.0435 (10) | |
| N3 | 0.5434 (4) | −0.0321 (3) | 0.2395 (2) | 0.0472 (11) | |
| H3N | 0.5793 | −0.0464 | 0.2797 | 0.057* | |
| N4 | 0.1168 (8) | 0.1719 (5) | 0.7331 (4) | 0.0849 (18) | |
| N5 | 0.1019 (4) | 0.3814 (3) | 0.4122 (2) | 0.0425 (10) | |
| N6 | 0.2870 (4) | 0.2572 (3) | 0.4237 (3) | 0.0557 (12) | |
| H6N | 0.3209 | 0.1949 | 0.4251 | 0.067* | |
| C1 | 0.3494 (5) | 0.0295 (4) | 0.1906 (3) | 0.0469 (13) | |
| C2 | 0.4071 (6) | −0.0031 (4) | 0.2565 (3) | 0.0482 (13) | |
| C3 | 0.3189 (7) | −0.0040 (4) | 0.3370 (3) | 0.0579 (15) | |
| C4 | 0.1815 (7) | 0.0235 (4) | 0.3527 (4) | 0.0704 (19) | |
| H4 | 0.1251 | 0.0217 | 0.4067 | 0.085* | |
| C5 | 0.1303 (6) | 0.0533 (5) | 0.2873 (5) | 0.0723 (19) | |
| C6 | 0.2116 (6) | 0.0578 (4) | 0.2078 (4) | 0.0598 (16) | |
| H6B | 0.1740 | 0.0801 | 0.1646 | 0.072* | |
| C7 | 0.4418 (5) | 0.0291 (4) | 0.1042 (3) | 0.0483 (13) | |
| H7A | 0.4333 | −0.0342 | 0.0819 | 0.058* | |
| H7B | 0.4119 | 0.0854 | 0.0702 | 0.058* | |
| C8 | 0.6281 (5) | −0.0394 (4) | 0.1557 (3) | 0.0407 (12) | |
| H8 | 0.7206 | −0.0254 | 0.1549 | 0.049* | |
| C9 | 0.6166 (6) | 0.1452 (4) | 0.1032 (4) | 0.0569 (15) | |
| H9 | 0.5423 | 0.1758 | 0.1462 | 0.068* | |
| C10 | 0.6231 (9) | 0.2061 (5) | 0.0216 (5) | 0.097 (3) | |
| H10A | 0.5357 | 0.2064 | 0.0102 | 0.116* | |
| H10B | 0.6912 | 0.1731 | −0.0221 | 0.116* | |
| C11 | 0.6590 (10) | 0.3179 (6) | 0.0215 (6) | 0.111 (3) | |
| H11A | 0.6649 | 0.3539 | −0.0324 | 0.133* | |
| H11B | 0.5873 | 0.3528 | 0.0622 | 0.133* | |
| C12 | 0.7856 (8) | 0.3205 (5) | 0.0402 (4) | 0.078 (2) | |
| H12 | 0.8577 | 0.2879 | −0.0027 | 0.093* | |
| C13 | 0.7829 (8) | 0.2642 (5) | 0.1224 (5) | 0.086 (2) | |
| H13A | 0.7152 | 0.2978 | 0.1659 | 0.103* | |
| H13B | 0.8711 | 0.2656 | 0.1325 | 0.103* | |
| C14 | 0.7484 (7) | 0.1518 (5) | 0.1241 (4) | 0.0737 (19) | |
| H14A | 0.8216 | 0.1165 | 0.0847 | 0.088* | |
| H14B | 0.7417 | 0.1176 | 0.1787 | 0.088* | |
| C15 | 0.6360 (5) | −0.1458 (4) | 0.1260 (3) | 0.0410 (12) | |
| C16 | 0.5412 (5) | −0.2159 (4) | 0.1637 (3) | 0.0465 (13) | |
| H16 | 0.4664 | −0.1973 | 0.2069 | 0.056* | |
| C17 | 0.5551 (6) | −0.3135 (4) | 0.1386 (3) | 0.0511 (13) | |
| C18 | 0.6655 (6) | −0.3457 (5) | 0.0763 (4) | 0.0662 (17) | |
| H18 | 0.6752 | −0.4123 | 0.0607 | 0.079* | |
| C19 | 0.7607 (6) | −0.2758 (5) | 0.0380 (4) | 0.0614 (16) | |
| H19 | 0.8361 | −0.2950 | −0.0045 | 0.074* | |
| C20 | 0.7458 (5) | −0.1784 (4) | 0.0618 (3) | 0.0487 (13) | |
| C21 | 0.3193 (5) | 0.4363 (4) | 0.4205 (3) | 0.0445 (12) | |
| C22 | 0.3731 (5) | 0.3365 (4) | 0.4085 (3) | 0.0443 (12) | |
| C23 | 0.5137 (5) | 0.3210 (4) | 0.3792 (3) | 0.0481 (13) | |
| C24 | 0.5984 (6) | 0.4014 (5) | 0.3633 (3) | 0.0586 (16) | |
| H24 | 0.6925 | 0.3895 | 0.3440 | 0.070* | |
| C25 | 0.5415 (6) | 0.4989 (5) | 0.3765 (4) | 0.0595 (15) | |
| C26 | 0.4024 (6) | 0.5159 (4) | 0.4057 (3) | 0.0539 (14) | |
| H26 | 0.3647 | 0.5820 | 0.4155 | 0.065* | |
| C27 | 0.1651 (5) | 0.4519 (4) | 0.4489 (3) | 0.0449 (12) | |
| H27A | 0.1338 | 0.4407 | 0.5087 | 0.054* | |
| H27B | 0.1378 | 0.5220 | 0.4331 | 0.054* | |
| C28 | 0.1395 (5) | 0.2766 (4) | 0.4373 (3) | 0.0463 (13) | |
| H28 | 0.1110 | 0.2319 | 0.4034 | 0.056* | |
| O6 | 0.0678 (19) | 0.4493 (13) | 0.0811 (8) | 0.057 (4) | 0.343 (12) |
| H6 | −0.0051 | 0.4425 | 0.0696 | 0.085* | 0.343 (12) |
| C29 | 0.1191 (7) | 0.4085 (5) | 0.3235 (3) | 0.079 (2) | 0.343 (12) |
| H29A | 0.1792 | 0.4634 | 0.3210 | 0.095* | 0.343 (12) |
| C30 | 0.0096 (19) | 0.4808 (16) | 0.3083 (8) | 0.052 (8) | 0.343 (12) |
| H30A | 0.0273 | 0.5481 | 0.3197 | 0.062* | 0.343 (12) |
| H30B | −0.0748 | 0.4616 | 0.3485 | 0.062* | 0.343 (12) |
| C31 | −0.0137 (17) | 0.4906 (19) | 0.2262 (8) | 0.067 (6) | 0.343 (12) |
| H31A | −0.0412 | 0.5617 | 0.2137 | 0.080* | 0.343 (12) |
| H31B | −0.0896 | 0.4502 | 0.2290 | 0.080* | 0.343 (12) |
| C32 | 0.1012 (18) | 0.4595 (13) | 0.1567 (7) | 0.065 (6) | 0.343 (12) |
| H32A | 0.1618 | 0.5162 | 0.1437 | 0.078* | 0.343 (12) |
| C33 | 0.1854 (18) | 0.3684 (13) | 0.1758 (7) | 0.053 (6) | 0.343 (12) |
| H33A | 0.1398 | 0.3080 | 0.1731 | 0.063* | 0.343 (12) |
| H33B | 0.2713 | 0.3671 | 0.1327 | 0.063* | 0.343 (12) |
| C34 | 0.2156 (15) | 0.3599 (13) | 0.2562 (6) | 0.057 (5) | 0.343 (12) |
| H34A | 0.2257 | 0.2876 | 0.2737 | 0.068* | 0.343 (12) |
| H34B | 0.3032 | 0.3881 | 0.2476 | 0.068* | 0.343 (12) |
| O6' | 0.0198 (12) | 0.4810 (10) | 0.0975 (6) | 0.095 (4) | 0.657 (12) |
| H6' | −0.0436 | 0.4642 | 0.0802 | 0.142* | 0.657 (12) |
| C29' | 0.1191 (7) | 0.4085 (5) | 0.3235 (3) | 0.079 (2) | 0.657 (12) |
| H29B | 0.2138 | 0.4277 | 0.3026 | 0.095* | 0.657 (12) |
| C30' | 0.0385 (12) | 0.5058 (7) | 0.3093 (5) | 0.049 (3) | 0.657 (12) |
| H30C | 0.0738 | 0.5610 | 0.3292 | 0.059* | 0.657 (12) |
| H30D | −0.0552 | 0.4992 | 0.3425 | 0.059* | 0.657 (12) |
| C31' | 0.0389 (12) | 0.5356 (7) | 0.2214 (5) | 0.067 (3) | 0.657 (12) |
| H31C | −0.0314 | 0.5897 | 0.2198 | 0.081* | 0.657 (12) |
| H31D | 0.1262 | 0.5619 | 0.1908 | 0.081* | 0.657 (12) |
| C32' | 0.0143 (13) | 0.4461 (8) | 0.1814 (6) | 0.081 (4) | 0.657 (12) |
| H32B | −0.0764 | 0.4224 | 0.2101 | 0.098* | 0.657 (12) |
| C33' | 0.1193 (15) | 0.3608 (7) | 0.1855 (5) | 0.077 (4) | 0.657 (12) |
| H33C | 0.2091 | 0.3839 | 0.1565 | 0.092* | 0.657 (12) |
| H33D | 0.1037 | 0.3037 | 0.1583 | 0.092* | 0.657 (12) |
| C34' | 0.1142 (13) | 0.3259 (6) | 0.2735 (5) | 0.072 (3) | 0.657 (12) |
| H34C | 0.0309 | 0.2912 | 0.2989 | 0.087* | 0.657 (12) |
| H34D | 0.1902 | 0.2764 | 0.2739 | 0.087* | 0.657 (12) |
| C35 | 0.0602 (5) | 0.2507 (4) | 0.5269 (3) | 0.0420 (12) | |
| C36 | 0.1226 (6) | 0.2241 (4) | 0.5892 (4) | 0.0519 (14) | |
| H36 | 0.2172 | 0.2205 | 0.5769 | 0.062* | |
| C37 | 0.0451 (7) | 0.2028 (4) | 0.6695 (4) | 0.0570 (15) | |
| C38 | −0.0942 (7) | 0.2086 (4) | 0.6919 (4) | 0.0617 (16) | |
| H38 | −0.1444 | 0.1964 | 0.7469 | 0.074* | |
| C39 | −0.1569 (6) | 0.2328 (4) | 0.6310 (3) | 0.0516 (14) | |
| H39 | −0.2515 | 0.2360 | 0.6442 | 0.062* | |
| C40 | −0.0820 (5) | 0.2523 (4) | 0.5505 (3) | 0.0435 (12) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br1 | 0.1211 (7) | 0.0938 (6) | 0.0491 (4) | −0.0380 (5) | −0.0139 (4) | 0.0028 (3) |
| Br2 | 0.0488 (4) | 0.0931 (6) | 0.1853 (10) | 0.0068 (4) | 0.0052 (5) | −0.0404 (6) |
| Br3 | 0.0649 (4) | 0.0829 (5) | 0.1281 (7) | −0.0302 (4) | −0.0261 (4) | 0.0094 (5) |
| Br4 | 0.0500 (4) | 0.0687 (4) | 0.0959 (5) | 0.0196 (3) | −0.0086 (3) | −0.0173 (4) |
| Cl1 | 0.0529 (9) | 0.0799 (11) | 0.0661 (10) | −0.0119 (8) | 0.0041 (8) | −0.0084 (8) |
| Cl2 | 0.0496 (8) | 0.0840 (11) | 0.0619 (9) | −0.0129 (7) | −0.0264 (7) | −0.0010 (8) |
| O1 | 0.120 (5) | 0.060 (3) | 0.193 (7) | −0.028 (3) | 0.019 (4) | −0.048 (4) |
| O2 | 0.073 (3) | 0.074 (3) | 0.120 (4) | −0.024 (3) | 0.013 (3) | −0.020 (3) |
| O3 | 0.106 (4) | 0.048 (3) | 0.083 (3) | −0.029 (2) | −0.010 (3) | 0.002 (2) |
| O4 | 0.096 (4) | 0.143 (5) | 0.134 (5) | −0.020 (4) | −0.076 (4) | 0.052 (4) |
| O5 | 0.147 (6) | 0.219 (8) | 0.072 (4) | −0.013 (5) | −0.056 (4) | 0.040 (4) |
| N1 | 0.073 (4) | 0.048 (3) | 0.094 (4) | −0.014 (3) | −0.011 (3) | −0.012 (3) |
| N2 | 0.046 (2) | 0.038 (2) | 0.048 (3) | −0.0040 (19) | −0.015 (2) | −0.004 (2) |
| N3 | 0.055 (3) | 0.051 (3) | 0.037 (2) | 0.004 (2) | −0.017 (2) | −0.006 (2) |
| N4 | 0.099 (5) | 0.081 (4) | 0.085 (5) | −0.012 (4) | −0.052 (4) | 0.022 (3) |
| N5 | 0.040 (2) | 0.045 (3) | 0.042 (2) | 0.0008 (19) | −0.0101 (19) | −0.0040 (19) |
| N6 | 0.042 (3) | 0.038 (3) | 0.079 (3) | 0.006 (2) | −0.005 (2) | −0.010 (2) |
| C1 | 0.047 (3) | 0.036 (3) | 0.057 (3) | −0.001 (2) | −0.014 (3) | −0.009 (3) |
| C2 | 0.059 (3) | 0.031 (3) | 0.053 (3) | −0.008 (2) | −0.008 (3) | −0.010 (2) |
| C3 | 0.076 (4) | 0.040 (3) | 0.050 (3) | −0.014 (3) | −0.002 (3) | −0.006 (3) |
| C4 | 0.068 (4) | 0.050 (4) | 0.072 (5) | −0.015 (3) | 0.023 (4) | −0.021 (3) |
| C5 | 0.049 (4) | 0.055 (4) | 0.101 (6) | 0.001 (3) | 0.003 (4) | −0.022 (4) |
| C6 | 0.052 (3) | 0.044 (3) | 0.084 (5) | 0.002 (3) | −0.015 (3) | −0.016 (3) |
| C7 | 0.049 (3) | 0.043 (3) | 0.056 (3) | 0.002 (2) | −0.021 (3) | −0.004 (3) |
| C8 | 0.040 (3) | 0.040 (3) | 0.044 (3) | −0.001 (2) | −0.016 (2) | −0.003 (2) |
| C9 | 0.063 (4) | 0.048 (3) | 0.063 (4) | −0.005 (3) | −0.023 (3) | −0.001 (3) |
| C10 | 0.142 (7) | 0.068 (5) | 0.106 (6) | −0.036 (5) | −0.080 (6) | 0.023 (4) |
| C11 | 0.148 (8) | 0.072 (5) | 0.141 (8) | −0.035 (5) | −0.094 (7) | 0.039 (5) |
| C12 | 0.099 (5) | 0.060 (4) | 0.070 (4) | −0.031 (4) | −0.012 (4) | 0.005 (3) |
| C13 | 0.110 (6) | 0.073 (5) | 0.088 (5) | −0.035 (4) | −0.045 (5) | 0.004 (4) |
| C14 | 0.079 (5) | 0.067 (4) | 0.082 (5) | −0.022 (4) | −0.037 (4) | 0.014 (4) |
| C15 | 0.043 (3) | 0.041 (3) | 0.040 (3) | 0.001 (2) | −0.014 (2) | −0.001 (2) |
| C16 | 0.047 (3) | 0.044 (3) | 0.048 (3) | 0.001 (2) | −0.013 (3) | −0.005 (2) |
| C17 | 0.052 (3) | 0.041 (3) | 0.059 (4) | −0.002 (3) | −0.014 (3) | −0.006 (3) |
| C18 | 0.070 (4) | 0.047 (4) | 0.078 (4) | 0.007 (3) | −0.012 (4) | −0.021 (3) |
| C19 | 0.056 (4) | 0.065 (4) | 0.052 (4) | 0.003 (3) | 0.004 (3) | −0.018 (3) |
| C20 | 0.043 (3) | 0.051 (3) | 0.048 (3) | 0.000 (2) | −0.008 (3) | −0.004 (3) |
| C21 | 0.044 (3) | 0.042 (3) | 0.046 (3) | 0.002 (2) | −0.014 (2) | 0.000 (2) |
| C22 | 0.045 (3) | 0.042 (3) | 0.044 (3) | 0.003 (2) | −0.013 (2) | 0.001 (2) |
| C23 | 0.041 (3) | 0.056 (3) | 0.044 (3) | 0.004 (3) | −0.010 (2) | −0.003 (3) |
| C24 | 0.036 (3) | 0.081 (5) | 0.058 (4) | −0.001 (3) | −0.016 (3) | 0.003 (3) |
| C25 | 0.049 (3) | 0.062 (4) | 0.066 (4) | −0.012 (3) | −0.016 (3) | 0.004 (3) |
| C26 | 0.053 (3) | 0.050 (3) | 0.058 (4) | −0.005 (3) | −0.014 (3) | −0.003 (3) |
| C27 | 0.041 (3) | 0.036 (3) | 0.052 (3) | −0.001 (2) | −0.006 (3) | −0.004 (2) |
| C28 | 0.042 (3) | 0.043 (3) | 0.054 (3) | −0.002 (2) | −0.013 (3) | −0.007 (3) |
| O6 | 0.080 (8) | 0.053 (7) | 0.038 (7) | 0.013 (6) | −0.021 (6) | −0.010 (5) |
| C29 | 0.095 (5) | 0.086 (5) | 0.056 (4) | 0.039 (4) | −0.028 (4) | −0.021 (4) |
| C30 | 0.055 (10) | 0.053 (10) | 0.045 (10) | 0.000 (8) | −0.011 (7) | −0.007 (7) |
| C31 | 0.072 (10) | 0.074 (10) | 0.056 (9) | 0.013 (8) | −0.027 (8) | −0.002 (8) |
| C32 | 0.099 (18) | 0.061 (13) | 0.038 (11) | 0.000 (12) | −0.025 (12) | −0.005 (9) |
| C33 | 0.040 (11) | 0.080 (14) | 0.038 (10) | −0.002 (9) | −0.010 (8) | −0.009 (9) |
| C34 | 0.045 (10) | 0.070 (12) | 0.053 (11) | 0.010 (9) | −0.013 (9) | −0.009 (9) |
| O6' | 0.114 (7) | 0.125 (8) | 0.053 (5) | −0.037 (6) | −0.030 (5) | 0.003 (5) |
| C29' | 0.095 (5) | 0.086 (5) | 0.056 (4) | 0.039 (4) | −0.028 (4) | −0.021 (4) |
| C30' | 0.060 (6) | 0.043 (6) | 0.050 (6) | −0.006 (5) | −0.021 (5) | −0.009 (4) |
| C31' | 0.066 (6) | 0.076 (6) | 0.063 (6) | −0.006 (5) | −0.027 (5) | 0.004 (5) |
| C32' | 0.079 (9) | 0.139 (12) | 0.029 (6) | −0.050 (9) | −0.015 (6) | 0.020 (6) |
| C33' | 0.103 (9) | 0.077 (7) | 0.047 (6) | −0.022 (6) | −0.009 (6) | −0.011 (5) |
| C34' | 0.092 (7) | 0.061 (6) | 0.067 (6) | −0.012 (5) | −0.027 (5) | 0.003 (5) |
| C35 | 0.042 (3) | 0.036 (3) | 0.050 (3) | 0.002 (2) | −0.017 (3) | −0.009 (2) |
| C36 | 0.046 (3) | 0.041 (3) | 0.069 (4) | 0.003 (2) | −0.022 (3) | 0.001 (3) |
| C37 | 0.075 (4) | 0.046 (3) | 0.058 (4) | −0.002 (3) | −0.036 (3) | 0.007 (3) |
| C38 | 0.075 (4) | 0.050 (4) | 0.055 (4) | −0.005 (3) | −0.013 (3) | 0.004 (3) |
| C39 | 0.049 (3) | 0.054 (3) | 0.050 (3) | −0.002 (3) | −0.014 (3) | 0.000 (3) |
| C40 | 0.044 (3) | 0.040 (3) | 0.051 (3) | −0.001 (2) | −0.020 (3) | −0.005 (2) |
Geometric parameters (Å, °)
| Br1—C3 | 1.897 (6) | C18—H18 | 0.9300 |
| Br2—C5 | 1.904 (6) | C19—C20 | 1.365 (8) |
| Br3—C25 | 1.890 (6) | C19—H19 | 0.9300 |
| Br4—C23 | 1.893 (5) | C21—C26 | 1.367 (7) |
| Cl1—C20 | 1.737 (5) | C21—C22 | 1.387 (7) |
| Cl2—C40 | 1.729 (5) | C21—C27 | 1.517 (7) |
| O1—N1 | 1.201 (6) | C22—C23 | 1.388 (7) |
| O2—N1 | 1.204 (7) | C23—C24 | 1.384 (8) |
| O3—C12 | 1.441 (7) | C24—C25 | 1.373 (8) |
| O3—H3 | 0.8401 | C24—H24 | 0.9300 |
| O4—N4 | 1.186 (8) | C25—C26 | 1.375 (8) |
| O5—N4 | 1.210 (8) | C26—H26 | 0.9300 |
| N1—C17 | 1.460 (7) | C27—H27A | 0.9700 |
| N2—C7 | 1.461 (6) | C27—H27B | 0.9700 |
| N2—C8 | 1.464 (6) | C28—C35 | 1.519 (7) |
| N2—C9 | 1.487 (7) | C28—H28 | 0.9800 |
| N3—C2 | 1.371 (7) | O6—C32 | 1.439 (10) |
| N3—C8 | 1.444 (6) | O6—H6 | 0.8401 |
| N3—H3N | 0.8600 | O6—H6' | 1.1466 |
| N4—C37 | 1.472 (8) | C29—C34 | 1.442 (8) |
| N5—C28 | 1.448 (6) | C29—C30 | 1.466 (8) |
| N5—C27 | 1.460 (6) | C29—H29A | 0.9800 |
| N5—C29 | 1.470 (7) | C30—C31 | 1.468 (9) |
| N6—C22 | 1.383 (6) | C30—H30A | 0.9700 |
| N6—C28 | 1.467 (6) | C30—H30B | 0.9700 |
| N6—H6N | 0.8600 | C31—C32 | 1.469 (9) |
| C1—C6 | 1.383 (7) | C31—H31A | 0.9700 |
| C1—C2 | 1.416 (7) | C31—H31B | 0.9700 |
| C1—C7 | 1.499 (7) | C32—C33 | 1.474 (9) |
| C2—C3 | 1.403 (8) | C32—H32A | 0.9800 |
| C3—C4 | 1.379 (9) | C33—C34 | 1.470 (9) |
| C4—C5 | 1.364 (9) | C33—H33A | 0.9700 |
| C4—H4 | 0.9300 | C33—H33B | 0.9700 |
| C5—C6 | 1.363 (9) | C34—H34A | 0.9700 |
| C6—H6B | 0.9300 | C34—H34B | 0.9700 |
| C7—H7A | 0.9700 | O6'—C32' | 1.432 (12) |
| C7—H7B | 0.9700 | O6'—H6 | 0.8290 |
| C8—C15 | 1.525 (7) | O6'—H6' | 0.8401 |
| C8—H8 | 0.9800 | C30'—C31' | 1.496 (7) |
| C9—C14 | 1.505 (8) | C30'—H30C | 0.9700 |
| C9—C10 | 1.507 (8) | C30'—H30D | 0.9700 |
| C9—H9 | 0.9800 | C31'—C32' | 1.494 (7) |
| C10—C11 | 1.548 (9) | C31'—H31C | 0.9700 |
| C10—H10A | 0.9700 | C31'—H31D | 0.9700 |
| C10—H10B | 0.9700 | C32'—C33' | 1.492 (8) |
| C11—C12 | 1.427 (10) | C32'—H32B | 0.9800 |
| C11—H11A | 0.9700 | C33'—C34' | 1.497 (7) |
| C11—H11B | 0.9700 | C33'—H33C | 0.9700 |
| C12—C13 | 1.497 (9) | C33'—H33D | 0.9700 |
| C12—H12 | 0.9800 | C34'—H34C | 0.9700 |
| C13—C14 | 1.545 (9) | C34'—H34D | 0.9700 |
| C13—H13A | 0.9700 | C35—C36 | 1.382 (7) |
| C13—H13B | 0.9700 | C35—C40 | 1.397 (7) |
| C14—H14A | 0.9700 | C36—C37 | 1.377 (8) |
| C14—H14B | 0.9700 | C36—H36 | 0.9300 |
| C15—C16 | 1.372 (7) | C37—C38 | 1.367 (8) |
| C15—C20 | 1.394 (7) | C38—C39 | 1.360 (8) |
| C16—C17 | 1.376 (7) | C38—H38 | 0.9300 |
| C16—H16 | 0.9300 | C39—C40 | 1.369 (7) |
| C17—C18 | 1.378 (8) | C39—H39 | 0.9300 |
| C18—C19 | 1.375 (8) | ||
| C12—O3—H3 | 118.6 | C24—C23—C22 | 121.7 (5) |
| O1—N1—O2 | 122.5 (6) | C24—C23—Br4 | 119.4 (4) |
| O1—N1—C17 | 118.7 (6) | C22—C23—Br4 | 118.9 (4) |
| O2—N1—C17 | 118.8 (5) | C25—C24—C23 | 119.0 (5) |
| C7—N2—C8 | 109.3 (4) | C25—C24—H24 | 120.5 |
| C7—N2—C9 | 112.8 (4) | C23—C24—H24 | 120.5 |
| C8—N2—C9 | 115.5 (4) | C24—C25—C26 | 120.2 (5) |
| C2—N3—C8 | 121.6 (4) | C24—C25—Br3 | 120.6 (4) |
| C2—N3—H3N | 119.2 | C26—C25—Br3 | 119.1 (5) |
| C8—N3—H3N | 119.2 | C21—C26—C25 | 120.5 (5) |
| O4—N4—O5 | 123.2 (7) | C21—C26—H26 | 119.8 |
| O4—N4—C37 | 118.6 (7) | C25—C26—H26 | 119.8 |
| O5—N4—C37 | 118.1 (7) | N5—C27—C21 | 110.9 (4) |
| C28—N5—C27 | 109.7 (4) | N5—C27—H27A | 109.5 |
| C28—N5—C29 | 117.3 (4) | C21—C27—H27A | 109.5 |
| C27—N5—C29 | 112.7 (4) | N5—C27—H27B | 109.5 |
| C22—N6—C28 | 121.7 (4) | C21—C27—H27B | 109.5 |
| C22—N6—H6N | 119.2 | H27A—C27—H27B | 108.1 |
| C28—N6—H6N | 119.2 | N5—C28—N6 | 112.7 (4) |
| C6—C1—C2 | 119.6 (5) | N5—C28—C35 | 109.0 (4) |
| C6—C1—C7 | 122.8 (5) | N6—C28—C35 | 112.2 (4) |
| C2—C1—C7 | 117.6 (5) | N5—C28—H28 | 107.6 |
| N3—C2—C3 | 123.3 (5) | N6—C28—H28 | 107.6 |
| N3—C2—C1 | 119.7 (5) | C35—C28—H28 | 107.6 |
| C3—C2—C1 | 117.0 (5) | C32—O6—H6 | 134.0 |
| C4—C3—C2 | 122.4 (6) | C32—O6—H6' | 118.5 |
| C4—C3—Br1 | 119.0 (5) | H6—O6—H6' | 20.8 |
| C2—C3—Br1 | 118.5 (5) | C34—C29—C30 | 120.7 (6) |
| C5—C4—C3 | 118.5 (6) | C34—C29—N5 | 126.4 (6) |
| C5—C4—H4 | 120.8 | C30—C29—N5 | 112.1 (6) |
| C3—C4—H4 | 120.8 | C34—C29—H29A | 93.0 |
| C6—C5—C4 | 121.6 (6) | C30—C29—H29A | 93.0 |
| C6—C5—Br2 | 119.5 (6) | N5—C29—H29A | 93.0 |
| C4—C5—Br2 | 118.8 (5) | C29—C30—C31 | 118.7 (7) |
| C5—C6—C1 | 120.8 (6) | C29—C30—H30A | 107.6 |
| C5—C6—H6B | 119.6 | C31—C30—H30A | 107.6 |
| C1—C6—H6B | 119.6 | C29—C30—H30B | 107.6 |
| N2—C7—C1 | 114.2 (4) | C31—C30—H30B | 107.6 |
| N2—C7—H7A | 108.7 | H30A—C30—H30B | 107.1 |
| C1—C7—H7A | 108.7 | C30—C31—C32 | 117.0 (8) |
| N2—C7—H7B | 108.7 | C30—C31—H31A | 108.0 |
| C1—C7—H7B | 108.7 | C32—C31—H31A | 108.1 |
| H7A—C7—H7B | 107.6 | C30—C31—H31B | 108.0 |
| N3—C8—N2 | 111.8 (4) | C32—C31—H31B | 108.0 |
| N3—C8—C15 | 113.2 (4) | H31A—C31—H31B | 107.3 |
| N2—C8—C15 | 110.3 (4) | O6—C32—C31 | 115.5 (14) |
| N3—C8—H8 | 107.1 | O6—C32—C33 | 109.5 (12) |
| N2—C8—H8 | 107.1 | C31—C32—C33 | 115.2 (9) |
| C15—C8—H8 | 107.1 | O6—C32—H32A | 105.1 |
| N2—C9—C14 | 113.4 (5) | C31—C32—H32A | 105.1 |
| N2—C9—C10 | 108.7 (5) | C33—C32—H32A | 105.1 |
| C14—C9—C10 | 109.1 (5) | C34—C33—C32 | 117.0 (8) |
| N2—C9—H9 | 108.5 | C34—C33—H33A | 108.1 |
| C14—C9—H9 | 108.5 | C32—C33—H33A | 108.1 |
| C10—C9—H9 | 108.5 | C34—C33—H33B | 108.1 |
| C9—C10—C11 | 111.9 (6) | C32—C33—H33B | 108.1 |
| C9—C10—H10A | 109.2 | H33A—C33—H33B | 107.3 |
| C11—C10—H10A | 109.2 | C29—C34—C33 | 118.0 (7) |
| C9—C10—H10B | 109.2 | C29—C34—H34A | 107.8 |
| C11—C10—H10B | 109.2 | C33—C34—H34A | 107.8 |
| H10A—C10—H10B | 107.9 | C29—C34—H34B | 107.8 |
| C12—C11—C10 | 110.9 (6) | C33—C34—H34B | 107.8 |
| C12—C11—H11A | 109.5 | H34A—C34—H34B | 107.1 |
| C10—C11—H11A | 109.5 | C32'—O6'—H6 | 118.2 |
| C12—C11—H11B | 109.5 | C32'—O6'—H6' | 116.1 |
| C10—C11—H11B | 109.5 | H6—O6'—H6' | 32.6 |
| H11A—C11—H11B | 108.1 | C31'—C30'—H30C | 108.4 |
| C11—C12—O3 | 111.2 (6) | C31'—C30'—H30D | 108.4 |
| C11—C12—C13 | 111.6 (6) | H30C—C30'—H30D | 107.5 |
| O3—C12—C13 | 108.1 (5) | C32'—C31'—C30' | 111.1 (7) |
| C11—C12—H12 | 108.6 | C32'—C31'—H31C | 109.4 |
| O3—C12—H12 | 108.6 | C30'—C31'—H31C | 109.4 |
| C13—C12—H12 | 108.6 | C32'—C31'—H31D | 109.4 |
| C12—C13—C14 | 110.3 (5) | C30'—C31'—H31D | 109.4 |
| C12—C13—H13A | 109.6 | H31C—C31'—H31D | 108.0 |
| C14—C13—H13A | 109.6 | O6'—C32'—C33' | 111.3 (9) |
| C12—C13—H13B | 109.6 | O6'—C32'—C31' | 107.2 (9) |
| C14—C13—H13B | 109.6 | C33'—C32'—C31' | 110.1 (7) |
| H13A—C13—H13B | 108.1 | O6'—C32'—H32B | 109.4 |
| C9—C14—C13 | 111.8 (5) | C33'—C32'—H32B | 109.4 |
| C9—C14—H14A | 109.3 | C31'—C32'—H32B | 109.4 |
| C13—C14—H14A | 109.3 | C32'—C33'—C34' | 110.9 (7) |
| C9—C14—H14B | 109.3 | C32'—C33'—H33C | 109.5 |
| C13—C14—H14B | 109.3 | C34'—C33'—H33C | 109.5 |
| H14A—C14—H14B | 107.9 | C32'—C33'—H33D | 109.5 |
| C16—C15—C20 | 116.8 (5) | C34'—C33'—H33D | 109.5 |
| C16—C15—C8 | 122.2 (5) | H33C—C33'—H33D | 108.1 |
| C20—C15—C8 | 120.8 (5) | C33'—C34'—H34C | 108.7 |
| C15—C16—C17 | 120.9 (5) | C33'—C34'—H34D | 108.7 |
| C15—C16—H16 | 119.5 | H34C—C34'—H34D | 107.6 |
| C17—C16—H16 | 119.5 | C36—C35—C40 | 116.3 (5) |
| C16—C17—C18 | 121.8 (5) | C36—C35—C28 | 122.9 (5) |
| C16—C17—N1 | 119.2 (5) | C40—C35—C28 | 120.9 (4) |
| C18—C17—N1 | 119.0 (5) | C37—C36—C35 | 120.2 (5) |
| C19—C18—C17 | 117.6 (5) | C37—C36—H36 | 119.9 |
| C19—C18—H18 | 121.2 | C35—C36—H36 | 119.9 |
| C17—C18—H18 | 121.2 | C38—C37—C36 | 122.7 (5) |
| C20—C19—C18 | 120.7 (5) | C38—C37—N4 | 119.3 (6) |
| C20—C19—H19 | 119.7 | C36—C37—N4 | 118.0 (6) |
| C18—C19—H19 | 119.7 | C39—C38—C37 | 117.7 (6) |
| C19—C20—C15 | 122.1 (5) | C39—C38—H38 | 121.1 |
| C19—C20—Cl1 | 117.5 (4) | C37—C38—H38 | 121.1 |
| C15—C20—Cl1 | 120.4 (4) | C38—C39—C40 | 120.7 (5) |
| C26—C21—C22 | 121.0 (5) | C38—C39—H39 | 119.7 |
| C26—C21—C27 | 122.4 (5) | C40—C39—H39 | 119.7 |
| C22—C21—C27 | 116.7 (5) | C39—C40—C35 | 122.4 (5) |
| N6—C22—C21 | 120.0 (5) | C39—C40—Cl2 | 116.8 (4) |
| N6—C22—C23 | 122.3 (5) | C35—C40—Cl2 | 120.8 (4) |
| C21—C22—C23 | 117.7 (5) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N3—H3N···O4i | 0.86 | 2.33 | 2.942 (7) | 129 |
| O3—H3···O6'ii | 0.84 | 1.89 | 2.713 (12) | 166 |
| O6—H6···O3iii | 0.84 | 2.04 | 2.877 (17) | 179 |
| O6'—H6'···O3iii | 0.84 | 1.85 | 2.694 (10) | 179 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y+1, −z; (iii) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5014).
References
- Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
- Bruker (2002). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
- Felix, F. S., Brett, C. M. A. & Angnes, L. (2008). Talanta, 76, 128–133. [DOI] [PubMed]
- Gaida, W., Klinder, K., Arndt, K. & Weiser, T. (2005). Neuropharmacology, 49, 1220–1227. [DOI] [PubMed]
- Lee, H. J., Joung, S. K., Kim, Y. G., Yoo, J.-Y. & Han, S. B. (2004). Pharm. Res.49, 93–98. [DOI] [PubMed]
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Wang, Z.-G., Wang, R., Zhang, Y., Zhi, F. & Yang, Y.-L. (2009). Acta Cryst. E65, o550. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015023/lh5014sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015023/lh5014Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

