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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Apr 28;66(Pt 5):o1205–o1206. doi: 10.1107/S1600536810015023

4-[6,8-Dibromo-2-(2-chloro-5-nitro­phen­yl)-1,2,3,4-tetra­hydro­quinazolin-3-yl]cyclo­hexa­nol

Zhi-Gang Wang a, Zong-Lin Xia b, Rong Wang c, Ming-Li Wang b,*
PMCID: PMC2979269  PMID: 21579236

Abstract

The title compound, C20H20Br2ClN3O3, was synthesized by the condensation reaction of 2-chloro-5-nitro­benzaldehyde with 4-(2-amino-3,5-dibromo­benzyl­amino)cyclo­hexa­nol in a methanol solution. There are two independent mol­ecules in the asymmetric unit and in one mol­ecule the atoms of the cyclo­hexane ring are disordered over two sets of sites with refined occupancies of 0.657 (12) and 0.343 (12). The dihedral angle between the two benzene rings is 89.5 (2)° in one mol­ecule and 82.9 (2)° in the other. In the crystal structure, inter­molecular N—H⋯O and O—H⋯O hydrogen bonds link the mol­ecules into chains propagating along [01Inline graphic].

Related literature

For details of the pharmaceutical uses of Ambroxol, systematic name 4-(2-amino-3,5-dibromo­benzyl­amino)cyclo­hexa­nol, a compound closely related to the title compound see: Felix et al. (2008); Gaida et al. (2005); Lee et al. (2004). For a related structure, see: Wang et al. (2009). For standard bond-length data, see: Allen et al. (1987).graphic file with name e-66-o1205-scheme1.jpg

Experimental

Crystal data

  • C20H20Br2ClN3O3

  • M r = 545.66

  • Triclinic, Inline graphic

  • a = 10.2614 (13) Å

  • b = 13.1418 (17) Å

  • c = 16.931 (2) Å

  • α = 83.764 (2)°

  • β = 73.309 (2)°

  • γ = 84.750 (2)°

  • V = 2169.8 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 3.89 mm−1

  • T = 298 K

  • 0.30 × 0.28 × 0.28 mm

Data collection

  • Bruker SMART CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.389, T max = 0.409

  • 11972 measured reflections

  • 8470 independent reflections

  • 4874 reflections with I > 2σ(I)

  • R int = 0.022

Refinement

  • R[F 2 > 2σ(F 2)] = 0.055

  • wR(F 2) = 0.154

  • S = 1.02

  • 8470 reflections

  • 578 parameters

  • 122 restraints

  • H-atom parameters constrained

  • Δρmax = 1.56 e Å−3

  • Δρmin = −1.07 e Å−3

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015023/lh5014sup1.cif

e-66-o1205-sup1.cif (31.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015023/lh5014Isup2.hkl

e-66-o1205-Isup2.hkl (414.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N3—H3N⋯O4i 0.86 2.33 2.942 (7) 129
O3—H3⋯O6′ii 0.84 1.89 2.713 (12) 166
O6—H6⋯O3iii 0.84 2.04 2.877 (17) 179
O6′—H6′⋯O3iii 0.84 1.85 2.694 (10) 179

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

Financial support from the Third Affiliated Hospital of Soochow University is acknowledged.

supplementary crystallographic information

Comment

Ambroxol, 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol, is an expectorant agent which leads to bronchial secretion due to its mucolytic properties (Felix et al., 2008; Gaida et al., 2005; Lee et al., 2004). Recently, we reported the crystal structure of a derivative of Ambroxol (Wang et al., 2009). In this paper, the crystal structure of the title compound, derived from the condensation reaction of 2-chloro-5-nitrobenzaldehyde with 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol in methanol solution, is reported.

There are two independent molecules in the asymmetric unit of the title compound, Fig. 1. The dihedral angle between the two benzene rings is 89.5 (2)° in one molecule and 82.9 (2)° in the other. The cyclohexyl rings adopt chair configurations. All bond lengths are within normal ranges (Allen et al., 1987).

Experimental

2-Chloro-5-nitrobenzaldehyde (1.0 mol, 185.6 mg) and 4-(2-amino-3,5-dibromobenzylamino)cyclohexanol (1.0 mmol, 378.1 mg) were dissolved in a methanol solution (30 ml). The mixture was stirred at room temperature to give a clear colorless solution. Crystals of the title compound were formed by gradual evaporation of the solvent for a week at room temperature.

Refinement

H atoms were included in calulated positions with, with C–H = 0.93–0.98 Å, N-H = 0.86Å and O-H = 0.84 with Uiso(H) = 1.2Ueq(C,N) or 1.5Ueq(O). The C29-C34 cyclohexyl ring is disordered over two distinct sites, with refined occupancies of 0.657 (12) and 0.343 (12). Bond length restraints were applied to the disorder model using the SADI commmand in SHELXL (Sheldrick, 2008).

Figures

Fig. 1.

Fig. 1.

The asymmetric unit of the title compound showing 30% probability ellipsoids. H atoms bonded to C atoms are not shown.

Crystal data

C20H20Br2ClN3O3 Z = 4
Mr = 545.66 F(000) = 1088
Triclinic, P1 Dx = 1.670 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 10.2614 (13) Å Cell parameters from 2646 reflections
b = 13.1418 (17) Å θ = 2.5–24.5°
c = 16.931 (2) Å µ = 3.89 mm1
α = 83.764 (2)° T = 298 K
β = 73.309 (2)° Block, colorless
γ = 84.750 (2)° 0.30 × 0.28 × 0.28 mm
V = 2169.8 (5) Å3

Data collection

Bruker SMART CCD area-detector diffractometer 8470 independent reflections
Radiation source: fine-focus sealed tube 4874 reflections with I > 2σ(I)
graphite Rint = 0.022
ω scans θmax = 26.2°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −12→7
Tmin = 0.389, Tmax = 0.409 k = −15→16
11972 measured reflections l = −21→20

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0631P)2 + 2.7275P] where P = (Fo2 + 2Fc2)/3
8470 reflections (Δ/σ)max = 0.001
578 parameters Δρmax = 1.56 e Å3
122 restraints Δρmin = −1.06 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
Br1 0.39058 (9) −0.05133 (6) 0.42693 (4) 0.0888 (3)
Br2 −0.06018 (7) 0.08773 (7) 0.30819 (7) 0.1156 (4)
Br3 0.65212 (7) 0.61194 (6) 0.35191 (6) 0.0919 (3)
Br4 0.59092 (6) 0.18627 (5) 0.36046 (5) 0.0747 (2)
Cl1 0.87128 (15) −0.09542 (13) 0.01005 (10) 0.0700 (4)
Cl2 −0.17164 (14) 0.27481 (12) 0.47738 (9) 0.0628 (4)
O1 0.4691 (6) −0.4725 (4) 0.1616 (4) 0.133 (3)
O2 0.3509 (5) −0.3554 (4) 0.2309 (4) 0.0953 (16)
O3 0.8184 (5) 0.4244 (3) 0.0419 (3) 0.0816 (14)
H3 0.8561 0.4573 −0.0030 0.122*
O4 0.2375 (7) 0.1609 (5) 0.7120 (4) 0.119 (2)
O5 0.0491 (7) 0.1570 (6) 0.8042 (4) 0.145 (3)
N1 0.4516 (6) −0.3856 (4) 0.1802 (4) 0.0731 (15)
N2 0.5854 (4) 0.0384 (3) 0.0978 (3) 0.0435 (10)
N3 0.5434 (4) −0.0321 (3) 0.2395 (2) 0.0472 (11)
H3N 0.5793 −0.0464 0.2797 0.057*
N4 0.1168 (8) 0.1719 (5) 0.7331 (4) 0.0849 (18)
N5 0.1019 (4) 0.3814 (3) 0.4122 (2) 0.0425 (10)
N6 0.2870 (4) 0.2572 (3) 0.4237 (3) 0.0557 (12)
H6N 0.3209 0.1949 0.4251 0.067*
C1 0.3494 (5) 0.0295 (4) 0.1906 (3) 0.0469 (13)
C2 0.4071 (6) −0.0031 (4) 0.2565 (3) 0.0482 (13)
C3 0.3189 (7) −0.0040 (4) 0.3370 (3) 0.0579 (15)
C4 0.1815 (7) 0.0235 (4) 0.3527 (4) 0.0704 (19)
H4 0.1251 0.0217 0.4067 0.085*
C5 0.1303 (6) 0.0533 (5) 0.2873 (5) 0.0723 (19)
C6 0.2116 (6) 0.0578 (4) 0.2078 (4) 0.0598 (16)
H6B 0.1740 0.0801 0.1646 0.072*
C7 0.4418 (5) 0.0291 (4) 0.1042 (3) 0.0483 (13)
H7A 0.4333 −0.0342 0.0819 0.058*
H7B 0.4119 0.0854 0.0702 0.058*
C8 0.6281 (5) −0.0394 (4) 0.1557 (3) 0.0407 (12)
H8 0.7206 −0.0254 0.1549 0.049*
C9 0.6166 (6) 0.1452 (4) 0.1032 (4) 0.0569 (15)
H9 0.5423 0.1758 0.1462 0.068*
C10 0.6231 (9) 0.2061 (5) 0.0216 (5) 0.097 (3)
H10A 0.5357 0.2064 0.0102 0.116*
H10B 0.6912 0.1731 −0.0221 0.116*
C11 0.6590 (10) 0.3179 (6) 0.0215 (6) 0.111 (3)
H11A 0.6649 0.3539 −0.0324 0.133*
H11B 0.5873 0.3528 0.0622 0.133*
C12 0.7856 (8) 0.3205 (5) 0.0402 (4) 0.078 (2)
H12 0.8577 0.2879 −0.0027 0.093*
C13 0.7829 (8) 0.2642 (5) 0.1224 (5) 0.086 (2)
H13A 0.7152 0.2978 0.1659 0.103*
H13B 0.8711 0.2656 0.1325 0.103*
C14 0.7484 (7) 0.1518 (5) 0.1241 (4) 0.0737 (19)
H14A 0.8216 0.1165 0.0847 0.088*
H14B 0.7417 0.1176 0.1787 0.088*
C15 0.6360 (5) −0.1458 (4) 0.1260 (3) 0.0410 (12)
C16 0.5412 (5) −0.2159 (4) 0.1637 (3) 0.0465 (13)
H16 0.4664 −0.1973 0.2069 0.056*
C17 0.5551 (6) −0.3135 (4) 0.1386 (3) 0.0511 (13)
C18 0.6655 (6) −0.3457 (5) 0.0763 (4) 0.0662 (17)
H18 0.6752 −0.4123 0.0607 0.079*
C19 0.7607 (6) −0.2758 (5) 0.0380 (4) 0.0614 (16)
H19 0.8361 −0.2950 −0.0045 0.074*
C20 0.7458 (5) −0.1784 (4) 0.0618 (3) 0.0487 (13)
C21 0.3193 (5) 0.4363 (4) 0.4205 (3) 0.0445 (12)
C22 0.3731 (5) 0.3365 (4) 0.4085 (3) 0.0443 (12)
C23 0.5137 (5) 0.3210 (4) 0.3792 (3) 0.0481 (13)
C24 0.5984 (6) 0.4014 (5) 0.3633 (3) 0.0586 (16)
H24 0.6925 0.3895 0.3440 0.070*
C25 0.5415 (6) 0.4989 (5) 0.3765 (4) 0.0595 (15)
C26 0.4024 (6) 0.5159 (4) 0.4057 (3) 0.0539 (14)
H26 0.3647 0.5820 0.4155 0.065*
C27 0.1651 (5) 0.4519 (4) 0.4489 (3) 0.0449 (12)
H27A 0.1338 0.4407 0.5087 0.054*
H27B 0.1378 0.5220 0.4331 0.054*
C28 0.1395 (5) 0.2766 (4) 0.4373 (3) 0.0463 (13)
H28 0.1110 0.2319 0.4034 0.056*
O6 0.0678 (19) 0.4493 (13) 0.0811 (8) 0.057 (4) 0.343 (12)
H6 −0.0051 0.4425 0.0696 0.085* 0.343 (12)
C29 0.1191 (7) 0.4085 (5) 0.3235 (3) 0.079 (2) 0.343 (12)
H29A 0.1792 0.4634 0.3210 0.095* 0.343 (12)
C30 0.0096 (19) 0.4808 (16) 0.3083 (8) 0.052 (8) 0.343 (12)
H30A 0.0273 0.5481 0.3197 0.062* 0.343 (12)
H30B −0.0748 0.4616 0.3485 0.062* 0.343 (12)
C31 −0.0137 (17) 0.4906 (19) 0.2262 (8) 0.067 (6) 0.343 (12)
H31A −0.0412 0.5617 0.2137 0.080* 0.343 (12)
H31B −0.0896 0.4502 0.2290 0.080* 0.343 (12)
C32 0.1012 (18) 0.4595 (13) 0.1567 (7) 0.065 (6) 0.343 (12)
H32A 0.1618 0.5162 0.1437 0.078* 0.343 (12)
C33 0.1854 (18) 0.3684 (13) 0.1758 (7) 0.053 (6) 0.343 (12)
H33A 0.1398 0.3080 0.1731 0.063* 0.343 (12)
H33B 0.2713 0.3671 0.1327 0.063* 0.343 (12)
C34 0.2156 (15) 0.3599 (13) 0.2562 (6) 0.057 (5) 0.343 (12)
H34A 0.2257 0.2876 0.2737 0.068* 0.343 (12)
H34B 0.3032 0.3881 0.2476 0.068* 0.343 (12)
O6' 0.0198 (12) 0.4810 (10) 0.0975 (6) 0.095 (4) 0.657 (12)
H6' −0.0436 0.4642 0.0802 0.142* 0.657 (12)
C29' 0.1191 (7) 0.4085 (5) 0.3235 (3) 0.079 (2) 0.657 (12)
H29B 0.2138 0.4277 0.3026 0.095* 0.657 (12)
C30' 0.0385 (12) 0.5058 (7) 0.3093 (5) 0.049 (3) 0.657 (12)
H30C 0.0738 0.5610 0.3292 0.059* 0.657 (12)
H30D −0.0552 0.4992 0.3425 0.059* 0.657 (12)
C31' 0.0389 (12) 0.5356 (7) 0.2214 (5) 0.067 (3) 0.657 (12)
H31C −0.0314 0.5897 0.2198 0.081* 0.657 (12)
H31D 0.1262 0.5619 0.1908 0.081* 0.657 (12)
C32' 0.0143 (13) 0.4461 (8) 0.1814 (6) 0.081 (4) 0.657 (12)
H32B −0.0764 0.4224 0.2101 0.098* 0.657 (12)
C33' 0.1193 (15) 0.3608 (7) 0.1855 (5) 0.077 (4) 0.657 (12)
H33C 0.2091 0.3839 0.1565 0.092* 0.657 (12)
H33D 0.1037 0.3037 0.1583 0.092* 0.657 (12)
C34' 0.1142 (13) 0.3259 (6) 0.2735 (5) 0.072 (3) 0.657 (12)
H34C 0.0309 0.2912 0.2989 0.087* 0.657 (12)
H34D 0.1902 0.2764 0.2739 0.087* 0.657 (12)
C35 0.0602 (5) 0.2507 (4) 0.5269 (3) 0.0420 (12)
C36 0.1226 (6) 0.2241 (4) 0.5892 (4) 0.0519 (14)
H36 0.2172 0.2205 0.5769 0.062*
C37 0.0451 (7) 0.2028 (4) 0.6695 (4) 0.0570 (15)
C38 −0.0942 (7) 0.2086 (4) 0.6919 (4) 0.0617 (16)
H38 −0.1444 0.1964 0.7469 0.074*
C39 −0.1569 (6) 0.2328 (4) 0.6310 (3) 0.0516 (14)
H39 −0.2515 0.2360 0.6442 0.062*
C40 −0.0820 (5) 0.2523 (4) 0.5505 (3) 0.0435 (12)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.1211 (7) 0.0938 (6) 0.0491 (4) −0.0380 (5) −0.0139 (4) 0.0028 (3)
Br2 0.0488 (4) 0.0931 (6) 0.1853 (10) 0.0068 (4) 0.0052 (5) −0.0404 (6)
Br3 0.0649 (4) 0.0829 (5) 0.1281 (7) −0.0302 (4) −0.0261 (4) 0.0094 (5)
Br4 0.0500 (4) 0.0687 (4) 0.0959 (5) 0.0196 (3) −0.0086 (3) −0.0173 (4)
Cl1 0.0529 (9) 0.0799 (11) 0.0661 (10) −0.0119 (8) 0.0041 (8) −0.0084 (8)
Cl2 0.0496 (8) 0.0840 (11) 0.0619 (9) −0.0129 (7) −0.0264 (7) −0.0010 (8)
O1 0.120 (5) 0.060 (3) 0.193 (7) −0.028 (3) 0.019 (4) −0.048 (4)
O2 0.073 (3) 0.074 (3) 0.120 (4) −0.024 (3) 0.013 (3) −0.020 (3)
O3 0.106 (4) 0.048 (3) 0.083 (3) −0.029 (2) −0.010 (3) 0.002 (2)
O4 0.096 (4) 0.143 (5) 0.134 (5) −0.020 (4) −0.076 (4) 0.052 (4)
O5 0.147 (6) 0.219 (8) 0.072 (4) −0.013 (5) −0.056 (4) 0.040 (4)
N1 0.073 (4) 0.048 (3) 0.094 (4) −0.014 (3) −0.011 (3) −0.012 (3)
N2 0.046 (2) 0.038 (2) 0.048 (3) −0.0040 (19) −0.015 (2) −0.004 (2)
N3 0.055 (3) 0.051 (3) 0.037 (2) 0.004 (2) −0.017 (2) −0.006 (2)
N4 0.099 (5) 0.081 (4) 0.085 (5) −0.012 (4) −0.052 (4) 0.022 (3)
N5 0.040 (2) 0.045 (3) 0.042 (2) 0.0008 (19) −0.0101 (19) −0.0040 (19)
N6 0.042 (3) 0.038 (3) 0.079 (3) 0.006 (2) −0.005 (2) −0.010 (2)
C1 0.047 (3) 0.036 (3) 0.057 (3) −0.001 (2) −0.014 (3) −0.009 (3)
C2 0.059 (3) 0.031 (3) 0.053 (3) −0.008 (2) −0.008 (3) −0.010 (2)
C3 0.076 (4) 0.040 (3) 0.050 (3) −0.014 (3) −0.002 (3) −0.006 (3)
C4 0.068 (4) 0.050 (4) 0.072 (5) −0.015 (3) 0.023 (4) −0.021 (3)
C5 0.049 (4) 0.055 (4) 0.101 (6) 0.001 (3) 0.003 (4) −0.022 (4)
C6 0.052 (3) 0.044 (3) 0.084 (5) 0.002 (3) −0.015 (3) −0.016 (3)
C7 0.049 (3) 0.043 (3) 0.056 (3) 0.002 (2) −0.021 (3) −0.004 (3)
C8 0.040 (3) 0.040 (3) 0.044 (3) −0.001 (2) −0.016 (2) −0.003 (2)
C9 0.063 (4) 0.048 (3) 0.063 (4) −0.005 (3) −0.023 (3) −0.001 (3)
C10 0.142 (7) 0.068 (5) 0.106 (6) −0.036 (5) −0.080 (6) 0.023 (4)
C11 0.148 (8) 0.072 (5) 0.141 (8) −0.035 (5) −0.094 (7) 0.039 (5)
C12 0.099 (5) 0.060 (4) 0.070 (4) −0.031 (4) −0.012 (4) 0.005 (3)
C13 0.110 (6) 0.073 (5) 0.088 (5) −0.035 (4) −0.045 (5) 0.004 (4)
C14 0.079 (5) 0.067 (4) 0.082 (5) −0.022 (4) −0.037 (4) 0.014 (4)
C15 0.043 (3) 0.041 (3) 0.040 (3) 0.001 (2) −0.014 (2) −0.001 (2)
C16 0.047 (3) 0.044 (3) 0.048 (3) 0.001 (2) −0.013 (3) −0.005 (2)
C17 0.052 (3) 0.041 (3) 0.059 (4) −0.002 (3) −0.014 (3) −0.006 (3)
C18 0.070 (4) 0.047 (4) 0.078 (4) 0.007 (3) −0.012 (4) −0.021 (3)
C19 0.056 (4) 0.065 (4) 0.052 (4) 0.003 (3) 0.004 (3) −0.018 (3)
C20 0.043 (3) 0.051 (3) 0.048 (3) 0.000 (2) −0.008 (3) −0.004 (3)
C21 0.044 (3) 0.042 (3) 0.046 (3) 0.002 (2) −0.014 (2) 0.000 (2)
C22 0.045 (3) 0.042 (3) 0.044 (3) 0.003 (2) −0.013 (2) 0.001 (2)
C23 0.041 (3) 0.056 (3) 0.044 (3) 0.004 (3) −0.010 (2) −0.003 (3)
C24 0.036 (3) 0.081 (5) 0.058 (4) −0.001 (3) −0.016 (3) 0.003 (3)
C25 0.049 (3) 0.062 (4) 0.066 (4) −0.012 (3) −0.016 (3) 0.004 (3)
C26 0.053 (3) 0.050 (3) 0.058 (4) −0.005 (3) −0.014 (3) −0.003 (3)
C27 0.041 (3) 0.036 (3) 0.052 (3) −0.001 (2) −0.006 (3) −0.004 (2)
C28 0.042 (3) 0.043 (3) 0.054 (3) −0.002 (2) −0.013 (3) −0.007 (3)
O6 0.080 (8) 0.053 (7) 0.038 (7) 0.013 (6) −0.021 (6) −0.010 (5)
C29 0.095 (5) 0.086 (5) 0.056 (4) 0.039 (4) −0.028 (4) −0.021 (4)
C30 0.055 (10) 0.053 (10) 0.045 (10) 0.000 (8) −0.011 (7) −0.007 (7)
C31 0.072 (10) 0.074 (10) 0.056 (9) 0.013 (8) −0.027 (8) −0.002 (8)
C32 0.099 (18) 0.061 (13) 0.038 (11) 0.000 (12) −0.025 (12) −0.005 (9)
C33 0.040 (11) 0.080 (14) 0.038 (10) −0.002 (9) −0.010 (8) −0.009 (9)
C34 0.045 (10) 0.070 (12) 0.053 (11) 0.010 (9) −0.013 (9) −0.009 (9)
O6' 0.114 (7) 0.125 (8) 0.053 (5) −0.037 (6) −0.030 (5) 0.003 (5)
C29' 0.095 (5) 0.086 (5) 0.056 (4) 0.039 (4) −0.028 (4) −0.021 (4)
C30' 0.060 (6) 0.043 (6) 0.050 (6) −0.006 (5) −0.021 (5) −0.009 (4)
C31' 0.066 (6) 0.076 (6) 0.063 (6) −0.006 (5) −0.027 (5) 0.004 (5)
C32' 0.079 (9) 0.139 (12) 0.029 (6) −0.050 (9) −0.015 (6) 0.020 (6)
C33' 0.103 (9) 0.077 (7) 0.047 (6) −0.022 (6) −0.009 (6) −0.011 (5)
C34' 0.092 (7) 0.061 (6) 0.067 (6) −0.012 (5) −0.027 (5) 0.003 (5)
C35 0.042 (3) 0.036 (3) 0.050 (3) 0.002 (2) −0.017 (3) −0.009 (2)
C36 0.046 (3) 0.041 (3) 0.069 (4) 0.003 (2) −0.022 (3) 0.001 (3)
C37 0.075 (4) 0.046 (3) 0.058 (4) −0.002 (3) −0.036 (3) 0.007 (3)
C38 0.075 (4) 0.050 (4) 0.055 (4) −0.005 (3) −0.013 (3) 0.004 (3)
C39 0.049 (3) 0.054 (3) 0.050 (3) −0.002 (3) −0.014 (3) 0.000 (3)
C40 0.044 (3) 0.040 (3) 0.051 (3) −0.001 (2) −0.020 (3) −0.005 (2)

Geometric parameters (Å, °)

Br1—C3 1.897 (6) C18—H18 0.9300
Br2—C5 1.904 (6) C19—C20 1.365 (8)
Br3—C25 1.890 (6) C19—H19 0.9300
Br4—C23 1.893 (5) C21—C26 1.367 (7)
Cl1—C20 1.737 (5) C21—C22 1.387 (7)
Cl2—C40 1.729 (5) C21—C27 1.517 (7)
O1—N1 1.201 (6) C22—C23 1.388 (7)
O2—N1 1.204 (7) C23—C24 1.384 (8)
O3—C12 1.441 (7) C24—C25 1.373 (8)
O3—H3 0.8401 C24—H24 0.9300
O4—N4 1.186 (8) C25—C26 1.375 (8)
O5—N4 1.210 (8) C26—H26 0.9300
N1—C17 1.460 (7) C27—H27A 0.9700
N2—C7 1.461 (6) C27—H27B 0.9700
N2—C8 1.464 (6) C28—C35 1.519 (7)
N2—C9 1.487 (7) C28—H28 0.9800
N3—C2 1.371 (7) O6—C32 1.439 (10)
N3—C8 1.444 (6) O6—H6 0.8401
N3—H3N 0.8600 O6—H6' 1.1466
N4—C37 1.472 (8) C29—C34 1.442 (8)
N5—C28 1.448 (6) C29—C30 1.466 (8)
N5—C27 1.460 (6) C29—H29A 0.9800
N5—C29 1.470 (7) C30—C31 1.468 (9)
N6—C22 1.383 (6) C30—H30A 0.9700
N6—C28 1.467 (6) C30—H30B 0.9700
N6—H6N 0.8600 C31—C32 1.469 (9)
C1—C6 1.383 (7) C31—H31A 0.9700
C1—C2 1.416 (7) C31—H31B 0.9700
C1—C7 1.499 (7) C32—C33 1.474 (9)
C2—C3 1.403 (8) C32—H32A 0.9800
C3—C4 1.379 (9) C33—C34 1.470 (9)
C4—C5 1.364 (9) C33—H33A 0.9700
C4—H4 0.9300 C33—H33B 0.9700
C5—C6 1.363 (9) C34—H34A 0.9700
C6—H6B 0.9300 C34—H34B 0.9700
C7—H7A 0.9700 O6'—C32' 1.432 (12)
C7—H7B 0.9700 O6'—H6 0.8290
C8—C15 1.525 (7) O6'—H6' 0.8401
C8—H8 0.9800 C30'—C31' 1.496 (7)
C9—C14 1.505 (8) C30'—H30C 0.9700
C9—C10 1.507 (8) C30'—H30D 0.9700
C9—H9 0.9800 C31'—C32' 1.494 (7)
C10—C11 1.548 (9) C31'—H31C 0.9700
C10—H10A 0.9700 C31'—H31D 0.9700
C10—H10B 0.9700 C32'—C33' 1.492 (8)
C11—C12 1.427 (10) C32'—H32B 0.9800
C11—H11A 0.9700 C33'—C34' 1.497 (7)
C11—H11B 0.9700 C33'—H33C 0.9700
C12—C13 1.497 (9) C33'—H33D 0.9700
C12—H12 0.9800 C34'—H34C 0.9700
C13—C14 1.545 (9) C34'—H34D 0.9700
C13—H13A 0.9700 C35—C36 1.382 (7)
C13—H13B 0.9700 C35—C40 1.397 (7)
C14—H14A 0.9700 C36—C37 1.377 (8)
C14—H14B 0.9700 C36—H36 0.9300
C15—C16 1.372 (7) C37—C38 1.367 (8)
C15—C20 1.394 (7) C38—C39 1.360 (8)
C16—C17 1.376 (7) C38—H38 0.9300
C16—H16 0.9300 C39—C40 1.369 (7)
C17—C18 1.378 (8) C39—H39 0.9300
C18—C19 1.375 (8)
C12—O3—H3 118.6 C24—C23—C22 121.7 (5)
O1—N1—O2 122.5 (6) C24—C23—Br4 119.4 (4)
O1—N1—C17 118.7 (6) C22—C23—Br4 118.9 (4)
O2—N1—C17 118.8 (5) C25—C24—C23 119.0 (5)
C7—N2—C8 109.3 (4) C25—C24—H24 120.5
C7—N2—C9 112.8 (4) C23—C24—H24 120.5
C8—N2—C9 115.5 (4) C24—C25—C26 120.2 (5)
C2—N3—C8 121.6 (4) C24—C25—Br3 120.6 (4)
C2—N3—H3N 119.2 C26—C25—Br3 119.1 (5)
C8—N3—H3N 119.2 C21—C26—C25 120.5 (5)
O4—N4—O5 123.2 (7) C21—C26—H26 119.8
O4—N4—C37 118.6 (7) C25—C26—H26 119.8
O5—N4—C37 118.1 (7) N5—C27—C21 110.9 (4)
C28—N5—C27 109.7 (4) N5—C27—H27A 109.5
C28—N5—C29 117.3 (4) C21—C27—H27A 109.5
C27—N5—C29 112.7 (4) N5—C27—H27B 109.5
C22—N6—C28 121.7 (4) C21—C27—H27B 109.5
C22—N6—H6N 119.2 H27A—C27—H27B 108.1
C28—N6—H6N 119.2 N5—C28—N6 112.7 (4)
C6—C1—C2 119.6 (5) N5—C28—C35 109.0 (4)
C6—C1—C7 122.8 (5) N6—C28—C35 112.2 (4)
C2—C1—C7 117.6 (5) N5—C28—H28 107.6
N3—C2—C3 123.3 (5) N6—C28—H28 107.6
N3—C2—C1 119.7 (5) C35—C28—H28 107.6
C3—C2—C1 117.0 (5) C32—O6—H6 134.0
C4—C3—C2 122.4 (6) C32—O6—H6' 118.5
C4—C3—Br1 119.0 (5) H6—O6—H6' 20.8
C2—C3—Br1 118.5 (5) C34—C29—C30 120.7 (6)
C5—C4—C3 118.5 (6) C34—C29—N5 126.4 (6)
C5—C4—H4 120.8 C30—C29—N5 112.1 (6)
C3—C4—H4 120.8 C34—C29—H29A 93.0
C6—C5—C4 121.6 (6) C30—C29—H29A 93.0
C6—C5—Br2 119.5 (6) N5—C29—H29A 93.0
C4—C5—Br2 118.8 (5) C29—C30—C31 118.7 (7)
C5—C6—C1 120.8 (6) C29—C30—H30A 107.6
C5—C6—H6B 119.6 C31—C30—H30A 107.6
C1—C6—H6B 119.6 C29—C30—H30B 107.6
N2—C7—C1 114.2 (4) C31—C30—H30B 107.6
N2—C7—H7A 108.7 H30A—C30—H30B 107.1
C1—C7—H7A 108.7 C30—C31—C32 117.0 (8)
N2—C7—H7B 108.7 C30—C31—H31A 108.0
C1—C7—H7B 108.7 C32—C31—H31A 108.1
H7A—C7—H7B 107.6 C30—C31—H31B 108.0
N3—C8—N2 111.8 (4) C32—C31—H31B 108.0
N3—C8—C15 113.2 (4) H31A—C31—H31B 107.3
N2—C8—C15 110.3 (4) O6—C32—C31 115.5 (14)
N3—C8—H8 107.1 O6—C32—C33 109.5 (12)
N2—C8—H8 107.1 C31—C32—C33 115.2 (9)
C15—C8—H8 107.1 O6—C32—H32A 105.1
N2—C9—C14 113.4 (5) C31—C32—H32A 105.1
N2—C9—C10 108.7 (5) C33—C32—H32A 105.1
C14—C9—C10 109.1 (5) C34—C33—C32 117.0 (8)
N2—C9—H9 108.5 C34—C33—H33A 108.1
C14—C9—H9 108.5 C32—C33—H33A 108.1
C10—C9—H9 108.5 C34—C33—H33B 108.1
C9—C10—C11 111.9 (6) C32—C33—H33B 108.1
C9—C10—H10A 109.2 H33A—C33—H33B 107.3
C11—C10—H10A 109.2 C29—C34—C33 118.0 (7)
C9—C10—H10B 109.2 C29—C34—H34A 107.8
C11—C10—H10B 109.2 C33—C34—H34A 107.8
H10A—C10—H10B 107.9 C29—C34—H34B 107.8
C12—C11—C10 110.9 (6) C33—C34—H34B 107.8
C12—C11—H11A 109.5 H34A—C34—H34B 107.1
C10—C11—H11A 109.5 C32'—O6'—H6 118.2
C12—C11—H11B 109.5 C32'—O6'—H6' 116.1
C10—C11—H11B 109.5 H6—O6'—H6' 32.6
H11A—C11—H11B 108.1 C31'—C30'—H30C 108.4
C11—C12—O3 111.2 (6) C31'—C30'—H30D 108.4
C11—C12—C13 111.6 (6) H30C—C30'—H30D 107.5
O3—C12—C13 108.1 (5) C32'—C31'—C30' 111.1 (7)
C11—C12—H12 108.6 C32'—C31'—H31C 109.4
O3—C12—H12 108.6 C30'—C31'—H31C 109.4
C13—C12—H12 108.6 C32'—C31'—H31D 109.4
C12—C13—C14 110.3 (5) C30'—C31'—H31D 109.4
C12—C13—H13A 109.6 H31C—C31'—H31D 108.0
C14—C13—H13A 109.6 O6'—C32'—C33' 111.3 (9)
C12—C13—H13B 109.6 O6'—C32'—C31' 107.2 (9)
C14—C13—H13B 109.6 C33'—C32'—C31' 110.1 (7)
H13A—C13—H13B 108.1 O6'—C32'—H32B 109.4
C9—C14—C13 111.8 (5) C33'—C32'—H32B 109.4
C9—C14—H14A 109.3 C31'—C32'—H32B 109.4
C13—C14—H14A 109.3 C32'—C33'—C34' 110.9 (7)
C9—C14—H14B 109.3 C32'—C33'—H33C 109.5
C13—C14—H14B 109.3 C34'—C33'—H33C 109.5
H14A—C14—H14B 107.9 C32'—C33'—H33D 109.5
C16—C15—C20 116.8 (5) C34'—C33'—H33D 109.5
C16—C15—C8 122.2 (5) H33C—C33'—H33D 108.1
C20—C15—C8 120.8 (5) C33'—C34'—H34C 108.7
C15—C16—C17 120.9 (5) C33'—C34'—H34D 108.7
C15—C16—H16 119.5 H34C—C34'—H34D 107.6
C17—C16—H16 119.5 C36—C35—C40 116.3 (5)
C16—C17—C18 121.8 (5) C36—C35—C28 122.9 (5)
C16—C17—N1 119.2 (5) C40—C35—C28 120.9 (4)
C18—C17—N1 119.0 (5) C37—C36—C35 120.2 (5)
C19—C18—C17 117.6 (5) C37—C36—H36 119.9
C19—C18—H18 121.2 C35—C36—H36 119.9
C17—C18—H18 121.2 C38—C37—C36 122.7 (5)
C20—C19—C18 120.7 (5) C38—C37—N4 119.3 (6)
C20—C19—H19 119.7 C36—C37—N4 118.0 (6)
C18—C19—H19 119.7 C39—C38—C37 117.7 (6)
C19—C20—C15 122.1 (5) C39—C38—H38 121.1
C19—C20—Cl1 117.5 (4) C37—C38—H38 121.1
C15—C20—Cl1 120.4 (4) C38—C39—C40 120.7 (5)
C26—C21—C22 121.0 (5) C38—C39—H39 119.7
C26—C21—C27 122.4 (5) C40—C39—H39 119.7
C22—C21—C27 116.7 (5) C39—C40—C35 122.4 (5)
N6—C22—C21 120.0 (5) C39—C40—Cl2 116.8 (4)
N6—C22—C23 122.3 (5) C35—C40—Cl2 120.8 (4)
C21—C22—C23 117.7 (5)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N3—H3N···O4i 0.86 2.33 2.942 (7) 129
O3—H3···O6'ii 0.84 1.89 2.713 (12) 166
O6—H6···O3iii 0.84 2.04 2.877 (17) 179
O6'—H6'···O3iii 0.84 1.85 2.694 (10) 179

Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y+1, −z; (iii) x−1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5014).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Bruker (2002). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Felix, F. S., Brett, C. M. A. & Angnes, L. (2008). Talanta, 76, 128–133. [DOI] [PubMed]
  4. Gaida, W., Klinder, K., Arndt, K. & Weiser, T. (2005). Neuropharmacology, 49, 1220–1227. [DOI] [PubMed]
  5. Lee, H. J., Joung, S. K., Kim, Y. G., Yoo, J.-Y. & Han, S. B. (2004). Pharm. Res.49, 93–98. [DOI] [PubMed]
  6. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  7. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  8. Wang, Z.-G., Wang, R., Zhang, Y., Zhi, F. & Yang, Y.-L. (2009). Acta Cryst. E65, o550. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015023/lh5014sup1.cif

e-66-o1205-sup1.cif (31.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015023/lh5014Isup2.hkl

e-66-o1205-Isup2.hkl (414.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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