Abstract
In the title compound, [CdI2(C12H12N2)(C2H6OS)], the CdII cation is coordinated by two N atoms from a dimethylbipyridine ligand, one O atom from a dimethyl sulfoxide molecule and two I− anions in a distorted trigonal–bipyramidal geometry. Intramolecular C—H⋯O hydrogen bonding and intermolecular π–π stacking between parallel pyridine rings [centroid–centroid distance = 3.658 (3) Å] are present in the crystal structure.
Related literature
For metal complexes of 4,4′-dimethyl-2,2′-bipyridine, see: Ahmadi et al. (2008 ▶); Amani et al. (2009 ▶); Kalateh et al. (2008 ▶); Bellusci et al. (2008 ▶); Hojjat Kashani et al. (2008 ▶); Sakamoto et al. (2004 ▶); Sofetis et al. (2006 ▶); Willett et al. (2001 ▶); Yoshikawa et al. (2003 ▶); Yousefi et al. (2008 ▶).
Experimental
Crystal data
[CdI2(C12H12N2)(C2H6OS)]
M r = 628.58
Monoclinic,
a = 8.729 (1) Å
b = 15.5247 (18) Å
c = 15.1354 (17) Å
β = 102.620 (9)°
V = 2001.5 (4) Å3
Z = 4
Mo Kα radiation
μ = 4.28 mm−1
T = 298 K
0.49 × 0.30 × 0.28 mm
Data collection
Bruker SMART CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.002, T max = 0.055
15568 measured reflections
5360 independent reflections
4625 reflections with I > 2σ(I)
R int = 0.082
Refinement
R[F 2 > 2σ(F 2)] = 0.066
wR(F 2) = 0.172
S = 1.16
5360 reflections
195 parameters
H-atom parameters constrained
Δρmax = 2.10 e Å−3
Δρmin = −2.23 e Å−3
Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810012572/xu2734sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012572/xu2734Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Selected bond lengths (Å).
| Cd1—N1 | 2.366 (5) |
| Cd1—N2 | 2.326 (4) |
| Cd1—O1 | 2.313 (5) |
| Cd1—I1 | 2.7535 (6) |
| Cd1—I2 | 2.7674 (6) |
Table 2. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C12—H12⋯O1 | 0.93 | 2.47 | 3.063 (8) | 122 |
Acknowledgments
We are grateful to the Islamic Azad University, Shahr-e-Rey Branch, for financial support.
supplementary crystallographic information
Comment
4,4'-Dimethyl-2,2'-bipyridine (4,4'-dmbipy), is a good bidentate ligand, and numerous complexes with 4,4'-dmbipy have been prepared, such as that of mercury (Kalateh et al., 2008; Yousefi et al., 2008), indium (Ahmadi et al., 2008), iron (Amani et al., 2009), platin (Hojjat Kashani et al., 2008), manganese (Sakamoto et al., 2004), silver (Bellusci et al., 2008), gallium (Sofetis et al., 2006), copper (Willett et al., 2001) and iridium (Yoshikawa et al., 2003). Here, we report the synthesis and structure of the title compound.
In the title compound (Fig. 1), the CdII atom is five-coordinated in a distorted square-pyramidal configuration by two N atoms from one 4,4'-dimethyl-2,2'-bipyridine, one O atom from one dimethyl sulfoxide and two I atoms. The Cd—I and Cd—N bond lengths and angles are collected in Table 1.
In the crystal structure, intermolecular C—H···O hydrogen bonds (Table 2) and π-π contacts (Fig. 2) between the pyridine rings, Cg3—Cg2i and Cg3—Cg3ii [symmetry cods: (i) 2-X,2-Y,2-Z and (ii) 1-X,2-Y,2-Z , where Cg2 and Cg3 are centroids of the rings (N1/C1—C3/C5—C6) and (N2/C7—C9/C11—C12), respectively] may stabilize the structure, with centroid-centroid distance of 3.657 (3) and 3.775 (3) Å.
Experimental
For the preparation of the title compound a solution of 4,4'-dimethyl-2,2'-bipyridine (0.15 g, 0.80 mmol) in methanol (10 ml) was added to a solution of CdI2 (0.29 g, 0.80 mmol) in methanol (5 ml) at room temperature. The suitable crystals for X-ray diffraction experiment were obtained by methanol diffusion to a colorless solution in DMSO. Suitable crystals were isolated after one week (yield; 0.36 g, 71.6%).
Refinement
All H atoms were positioned geometrically with C—H = 0.93 (aromatic) and 0.96 Å (methyl) and constrained to ride on their parent atoms, with Uiso(H)=1.2Ueq(c).
Figures
Fig. 1.
The molecular structure of the title molecule with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
Unit-cell packing diagram for (I).
Crystal data
| [CdI2(C12H12N2)(C2H6OS)] | F(000) = 1176 |
| Mr = 628.58 | Dx = 2.086 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 887 reflections |
| a = 8.729 (1) Å | θ = 1.9–29.3° |
| b = 15.5247 (18) Å | µ = 4.28 mm−1 |
| c = 15.1354 (17) Å | T = 298 K |
| β = 102.620 (9)° | Block, colorless |
| V = 2001.5 (4) Å3 | 0.49 × 0.30 × 0.28 mm |
| Z = 4 |
Data collection
| Bruker SMART CCD diffractometer | 5360 independent reflections |
| Radiation source: fine-focus sealed tube | 4625 reflections with I > 2σ(I) |
| graphite | Rint = 0.082 |
| φ and ω scans | θmax = 29.2°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1998) | h = −11→11 |
| Tmin = 0.002, Tmax = 0.055 | k = −21→20 |
| 15568 measured reflections | l = −20→19 |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.066 | H-atom parameters constrained |
| wR(F2) = 0.172 | w = 1/[σ2(Fo2) + (0.0903P)2 + 1.8883P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.16 | (Δ/σ)max = 0.015 |
| 5360 reflections | Δρmax = 2.10 e Å−3 |
| 195 parameters | Δρmin = −2.23 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0171 (10) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.9509 (8) | 0.7934 (4) | 0.8795 (4) | 0.0575 (14) | |
| H1 | 0.9529 | 0.7743 | 0.8216 | 0.069* | |
| C2 | 1.0322 (8) | 0.7476 (4) | 0.9527 (5) | 0.0596 (14) | |
| H2 | 1.0897 | 0.6991 | 0.9439 | 0.071* | |
| C3 | 1.0280 (8) | 0.7741 (4) | 1.0397 (4) | 0.0584 (14) | |
| C4 | 1.1139 (11) | 0.7258 (6) | 1.1206 (6) | 0.082 (2) | |
| H4C | 1.1322 | 0.7630 | 1.1725 | 0.098* | |
| H4B | 1.2126 | 0.7060 | 1.1101 | 0.098* | |
| H4A | 1.0522 | 0.6773 | 1.1313 | 0.098* | |
| C5 | 0.9435 (7) | 0.8469 (4) | 1.0476 (4) | 0.0499 (12) | |
| H5 | 0.9383 | 0.8666 | 1.1049 | 0.060* | |
| C6 | 0.8651 (5) | 0.8918 (3) | 0.9714 (3) | 0.0385 (9) | |
| C7 | 0.7726 (5) | 0.9709 (3) | 0.9790 (3) | 0.0385 (9) | |
| C8 | 0.7692 (6) | 1.0072 (4) | 1.0620 (3) | 0.0453 (10) | |
| H8 | 0.8262 | 0.9825 | 1.1151 | 0.054* | |
| C9 | 0.6794 (7) | 1.0810 (4) | 1.0656 (4) | 0.0488 (11) | |
| C10 | 0.6735 (10) | 1.1201 (5) | 1.1561 (4) | 0.0679 (17) | |
| H10A | 0.7188 | 1.1767 | 1.1603 | 0.081* | |
| H10B | 0.7315 | 1.0846 | 1.2037 | 0.081* | |
| H10C | 0.5663 | 1.1239 | 1.1617 | 0.081* | |
| C11 | 0.5989 (8) | 1.1146 (4) | 0.9857 (4) | 0.0568 (13) | |
| H11 | 0.5372 | 1.1635 | 0.9857 | 0.068* | |
| C12 | 0.6086 (8) | 1.0764 (4) | 0.9054 (4) | 0.0545 (13) | |
| H12 | 0.5546 | 1.1013 | 0.8517 | 0.065* | |
| C13 | 0.411 (3) | 1.1614 (9) | 0.6212 (9) | 0.189 (11) | |
| H13A | 0.3652 | 1.1675 | 0.6730 | 0.227* | |
| H13B | 0.3365 | 1.1789 | 0.5677 | 0.227* | |
| H13C | 0.5029 | 1.1971 | 0.6287 | 0.227* | |
| C14 | 0.2811 (10) | 1.0103 (11) | 0.5584 (6) | 0.110 (4) | |
| H14C | 0.2942 | 0.9510 | 0.5437 | 0.132* | |
| H14B | 0.2383 | 1.0418 | 0.5040 | 0.132* | |
| H14A | 0.2108 | 1.0141 | 0.5989 | 0.132* | |
| N1 | 0.8687 (5) | 0.8647 (3) | 0.8888 (3) | 0.0471 (9) | |
| N2 | 0.6925 (5) | 1.0048 (3) | 0.9006 (3) | 0.0439 (9) | |
| O1 | 0.4994 (6) | 1.0216 (4) | 0.7072 (3) | 0.0664 (12) | |
| Cd1 | 0.72703 (5) | 0.94561 (3) | 0.76515 (2) | 0.04529 (16) | |
| I1 | 0.93442 (5) | 1.04931 (3) | 0.70096 (3) | 0.06676 (19) | |
| I2 | 0.63195 (7) | 0.80423 (3) | 0.65550 (3) | 0.0758 (2) | |
| S1 | 0.46338 (19) | 1.05399 (12) | 0.61041 (10) | 0.0574 (4) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.068 (3) | 0.057 (3) | 0.046 (3) | 0.009 (3) | 0.008 (2) | −0.013 (2) |
| C2 | 0.066 (3) | 0.056 (3) | 0.055 (3) | 0.014 (3) | 0.010 (3) | −0.008 (3) |
| C3 | 0.062 (3) | 0.055 (3) | 0.056 (3) | 0.010 (3) | 0.007 (3) | 0.003 (3) |
| C4 | 0.094 (5) | 0.082 (5) | 0.063 (4) | 0.032 (4) | 0.006 (4) | 0.008 (4) |
| C5 | 0.055 (3) | 0.054 (3) | 0.038 (2) | 0.008 (2) | 0.005 (2) | 0.000 (2) |
| C6 | 0.038 (2) | 0.042 (2) | 0.036 (2) | −0.0003 (16) | 0.0086 (16) | 0.0007 (18) |
| C7 | 0.037 (2) | 0.045 (2) | 0.033 (2) | −0.0025 (17) | 0.0059 (16) | −0.0002 (18) |
| C8 | 0.054 (3) | 0.050 (3) | 0.031 (2) | 0.003 (2) | 0.0069 (18) | −0.0019 (19) |
| C9 | 0.055 (3) | 0.048 (3) | 0.045 (3) | 0.002 (2) | 0.013 (2) | −0.003 (2) |
| C10 | 0.090 (5) | 0.070 (4) | 0.046 (3) | 0.011 (4) | 0.019 (3) | −0.009 (3) |
| C11 | 0.068 (3) | 0.051 (3) | 0.050 (3) | 0.013 (3) | 0.010 (3) | −0.004 (2) |
| C12 | 0.069 (3) | 0.055 (3) | 0.036 (2) | 0.014 (3) | 0.002 (2) | 0.002 (2) |
| C13 | 0.38 (3) | 0.084 (8) | 0.079 (7) | 0.051 (13) | −0.012 (12) | 0.009 (6) |
| C14 | 0.061 (4) | 0.200 (13) | 0.063 (5) | −0.027 (6) | 0.001 (4) | −0.007 (7) |
| N1 | 0.050 (2) | 0.053 (2) | 0.038 (2) | −0.0004 (18) | 0.0086 (17) | −0.0057 (18) |
| N2 | 0.048 (2) | 0.048 (2) | 0.0333 (18) | 0.0019 (17) | 0.0039 (16) | −0.0008 (17) |
| O1 | 0.059 (2) | 0.095 (4) | 0.042 (2) | 0.014 (2) | 0.0060 (18) | 0.010 (2) |
| Cd1 | 0.0492 (2) | 0.0532 (3) | 0.0323 (2) | −0.00441 (14) | 0.00650 (14) | −0.00210 (14) |
| I1 | 0.0659 (3) | 0.0866 (4) | 0.0452 (2) | −0.0248 (2) | 0.00653 (18) | 0.01257 (19) |
| I2 | 0.0940 (4) | 0.0675 (3) | 0.0581 (3) | −0.0181 (2) | −0.0001 (2) | −0.0193 (2) |
| S1 | 0.0532 (7) | 0.0810 (11) | 0.0364 (6) | 0.0013 (6) | 0.0061 (5) | −0.0011 (6) |
Geometric parameters (Å, °)
| C1—N1 | 1.342 (8) | C10—H10B | 0.9600 |
| C1—C2 | 1.376 (9) | C10—H10C | 0.9600 |
| C1—H1 | 0.9300 | C11—C12 | 1.373 (8) |
| C2—C3 | 1.387 (9) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—N2 | 1.342 (8) |
| C3—C5 | 1.368 (8) | C12—H12 | 0.9300 |
| C3—C4 | 1.491 (9) | C13—S1 | 1.746 (13) |
| C4—H4C | 0.9600 | C13—H13A | 0.9600 |
| C4—H4B | 0.9600 | C13—H13B | 0.9600 |
| C4—H4A | 0.9600 | C13—H13C | 0.9600 |
| C5—C6 | 1.393 (7) | C14—S1 | 1.751 (9) |
| C5—H5 | 0.9300 | C14—H14C | 0.9600 |
| C6—N1 | 1.327 (6) | C14—H14B | 0.9600 |
| C6—C7 | 1.487 (7) | C14—H14A | 0.9600 |
| C7—N2 | 1.346 (6) | Cd1—N1 | 2.366 (5) |
| C7—C8 | 1.384 (7) | Cd1—N2 | 2.326 (4) |
| C8—C9 | 1.396 (8) | O1—S1 | 1.515 (5) |
| C8—H8 | 0.9300 | Cd1—O1 | 2.313 (5) |
| C9—C11 | 1.363 (9) | Cd1—I1 | 2.7535 (6) |
| C9—C10 | 1.508 (8) | Cd1—I2 | 2.7674 (6) |
| C10—H10A | 0.9600 | ||
| N1—C1—C2 | 122.4 (6) | C9—C11—H11 | 120.0 |
| N1—C1—H1 | 118.8 | C12—C11—H11 | 120.0 |
| C2—C1—H1 | 118.8 | N2—C12—C11 | 123.1 (5) |
| C1—C2—C3 | 119.6 (6) | N2—C12—H12 | 118.5 |
| C1—C2—H2 | 120.2 | C11—C12—H12 | 118.5 |
| C3—C2—H2 | 120.2 | S1—C13—H13A | 109.5 |
| C5—C3—C2 | 117.0 (6) | S1—C13—H13B | 109.5 |
| C5—C3—C4 | 121.8 (6) | H13A—C13—H13B | 109.5 |
| C2—C3—C4 | 121.1 (6) | S1—C13—H13C | 109.5 |
| C3—C4—H4C | 109.5 | H13A—C13—H13C | 109.5 |
| C3—C4—H4B | 109.5 | H13B—C13—H13C | 109.5 |
| H4C—C4—H4B | 109.5 | S1—C14—H14C | 109.5 |
| C3—C4—H4A | 109.5 | S1—C14—H14B | 109.5 |
| H4C—C4—H4A | 109.5 | H14C—C14—H14B | 109.5 |
| H4B—C4—H4A | 109.5 | S1—C14—H14A | 109.5 |
| C3—C5—C6 | 121.2 (5) | H14C—C14—H14A | 109.5 |
| C3—C5—H5 | 119.4 | H14B—C14—H14A | 109.5 |
| C6—C5—H5 | 119.4 | C6—N1—C1 | 118.9 (5) |
| N1—C6—C5 | 120.9 (5) | C6—N1—Cd1 | 117.5 (4) |
| N1—C6—C7 | 117.4 (4) | C1—N1—Cd1 | 123.6 (4) |
| C5—C6—C7 | 121.8 (4) | C12—N2—C7 | 117.5 (5) |
| N2—C7—C8 | 122.1 (5) | C12—N2—Cd1 | 123.5 (3) |
| N2—C7—C6 | 116.2 (4) | C7—N2—Cd1 | 118.7 (3) |
| C8—C7—C6 | 121.7 (4) | S1—O1—Cd1 | 121.0 (3) |
| C7—C8—C9 | 119.6 (5) | O1—Cd1—N2 | 82.36 (16) |
| C7—C8—H8 | 120.2 | O1—Cd1—N1 | 145.92 (16) |
| C9—C8—H8 | 120.2 | N2—Cd1—N1 | 70.02 (16) |
| C11—C9—C8 | 117.7 (5) | O1—Cd1—I1 | 98.31 (14) |
| C11—C9—C10 | 122.5 (6) | N2—Cd1—I1 | 107.57 (12) |
| C8—C9—C10 | 119.8 (5) | N1—Cd1—I1 | 108.61 (12) |
| C9—C10—H10A | 109.5 | O1—Cd1—I2 | 93.25 (14) |
| C9—C10—H10B | 109.5 | N2—Cd1—I2 | 139.68 (12) |
| H10A—C10—H10B | 109.5 | N1—Cd1—I2 | 95.15 (12) |
| C9—C10—H10C | 109.5 | I1—Cd1—I2 | 112.72 (2) |
| H10A—C10—H10C | 109.5 | O1—S1—C13 | 103.3 (5) |
| H10B—C10—H10C | 109.5 | O1—S1—C14 | 106.4 (5) |
| C9—C11—C12 | 120.0 (6) | C13—S1—C14 | 100.5 (9) |
| N1—C1—C2—C3 | 1.3 (11) | C8—C7—N2—C12 | 0.5 (8) |
| C1—C2—C3—C5 | −1.2 (11) | C6—C7—N2—C12 | −179.7 (5) |
| C1—C2—C3—C4 | 179.6 (8) | C8—C7—N2—Cd1 | 174.2 (4) |
| C2—C3—C5—C6 | 0.2 (10) | C6—C7—N2—Cd1 | −6.0 (6) |
| C4—C3—C5—C6 | 179.4 (7) | S1—O1—Cd1—N2 | 152.1 (4) |
| C3—C5—C6—N1 | 0.8 (9) | S1—O1—Cd1—N1 | −172.4 (3) |
| C3—C5—C6—C7 | 179.9 (6) | S1—O1—Cd1—I1 | 45.3 (4) |
| N1—C6—C7—N2 | 4.0 (7) | S1—O1—Cd1—I2 | −68.2 (4) |
| C5—C6—C7—N2 | −175.1 (5) | C12—N2—Cd1—O1 | −22.7 (5) |
| N1—C6—C7—C8 | −176.1 (5) | C7—N2—Cd1—O1 | 164.0 (4) |
| C5—C6—C7—C8 | 4.8 (8) | C12—N2—Cd1—N1 | 177.6 (5) |
| N2—C7—C8—C9 | 0.4 (8) | C7—N2—Cd1—N1 | 4.3 (4) |
| C6—C7—C8—C9 | −179.4 (5) | C12—N2—Cd1—I1 | 73.7 (5) |
| C7—C8—C9—C11 | −0.4 (9) | C7—N2—Cd1—I1 | −99.6 (4) |
| C7—C8—C9—C10 | 179.2 (6) | C12—N2—Cd1—I2 | −108.7 (5) |
| C8—C9—C11—C12 | −0.5 (10) | C7—N2—Cd1—I2 | 78.0 (4) |
| C10—C9—C11—C12 | 180.0 (7) | C6—N1—Cd1—O1 | −39.9 (6) |
| C9—C11—C12—N2 | 1.5 (11) | C1—N1—Cd1—O1 | 139.8 (5) |
| C5—C6—N1—C1 | −0.8 (8) | C6—N1—Cd1—N2 | −2.0 (4) |
| C7—C6—N1—C1 | −179.9 (5) | C1—N1—Cd1—N2 | 177.7 (5) |
| C5—C6—N1—Cd1 | 179.0 (4) | C6—N1—Cd1—I1 | 100.5 (4) |
| C7—C6—N1—Cd1 | −0.2 (6) | C1—N1—Cd1—I1 | −79.8 (5) |
| C2—C1—N1—C6 | −0.3 (10) | C6—N1—Cd1—I2 | −143.5 (4) |
| C2—C1—N1—Cd1 | −180.0 (5) | C1—N1—Cd1—I2 | 36.2 (5) |
| C11—C12—N2—C7 | −1.4 (10) | Cd1—O1—S1—C13 | −131.6 (9) |
| C11—C12—N2—Cd1 | −174.8 (5) | Cd1—O1—S1—C14 | 123.1 (6) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C12—H12···O1 | 0.93 | 2.47 | 3.063 (8) | 122 |
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU2734).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810012572/xu2734sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012572/xu2734Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


