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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 May 26;66(Pt 6):o1449. doi: 10.1107/S1600536810018866

3-(4-Methoxy­benz­yl)-1-benzothio­phene

B Gunasekaran a, V Dhayalan b, A K Mohanakrishnan b, G Chakkaravarthi c, V Manivannan d,*
PMCID: PMC2979385  PMID: 21579520

Abstract

In the title compound, C16H14OS, the dihedral angle between the benzothio­phene ring system and the benzene ring is 72.41 (12)°. A weak inter­molecular C—H⋯π inter­action from the benzene ring to the benzothio­phene ring system is observed in the crystal structure.

Related literature

For the biological activity of thio­phene derivatives, see: Bonini et al. (2005); Brault et al. (2005); Isloora et al. (2010). For related structures, see: Gunasekaran et al. (2009); Umadevi et al. (2009). For bond-length data, see: Allen et al. (1987).graphic file with name e-66-o1449-scheme1.jpg

Experimental

Crystal data

  • C16H14OS

  • M r = 254.33

  • Monoclinic, Inline graphic

  • a = 8.0158 (6) Å

  • b = 10.8230 (9) Å

  • c = 8.1219 (6) Å

  • β = 112.563 (4)°

  • V = 650.68 (9) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.23 mm−1

  • T = 295 K

  • 0.25 × 0.20 × 0.20 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.946, T max = 0.954

  • 6033 measured reflections

  • 2946 independent reflections

  • 2721 reflections with I > 2σ(I)

  • R int = 0.171

Refinement

  • R[F 2 > 2σ(F 2)] = 0.066

  • wR(F 2) = 0.176

  • S = 1.06

  • 2946 reflections

  • 164 parameters

  • 2 restraints

  • H-atom parameters constrained

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.48 e Å−3

  • Absolute structure: Flack (1983), 1337 Friedel pairs

  • Flack parameter: −0.04 (11)

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018866/is2551sup1.cif

e-66-o1449-sup1.cif (16.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018866/is2551Isup2.hkl

e-66-o1449-Isup2.hkl (141.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C14—H14⋯Cgi 0.93 2.83 3.617 (2) 143

Symmetry code: (i) Inline graphic.

Acknowledgments

BG thanks AMET University management, India, for their kind support.

supplementary crystallographic information

Comment

Thiophene derivatives exhibit anti-HIV PR inhibitors (Bonini et al., 2005) and anti-breast cancer (Brault et al., 2005) activities. In addition, some of the benzo[b]thiophene derivatives shows significant antimicrobial and anti-inflammatory activities (Isloora et al., 2010).

The geometric parameters of the title molecule (Fig. 1) agree well with reported similar structures (Gunasekaran et al., 2009; Umadevi et al., 2009). The dihedral angle between the two benzene rings is 71.93 (8)°. The C1—S1 and C8—S1 bond distances are 1.738 (3) and 1.734 (3) Å respectively, which are comparable to the literature value of 1.712 (2) Å (Allen et al., 1987).

The crystal packing is stabilized by a weak C—H···π interaction [C14—H14···Cg (-1+x, y, -1+z), Table 1; Cg is the centroid of the ring defined by the atoms C1—C6] .

Experimental

To a solution of 1-(bromomethyl)-4-methoxybenzene (0.7 g, 3.48 mmol) in dry 1,2-dichloroethane (20 ml) ZnBr2 (0.23 g, 1.02 mmol) and benzo[b]thiophene (0.7 g, 5.22 mmol) were added. It was then stirred at room temperature for 6 h under N2 atmosphere. The solvent was removed and the residue was quenched with ice-water (50 ml) containing 1 ml of conc. HCl, extracted with chloroform (2 × 10 ml) and dried (Na2SO4). Removal of solvent followed by column chromatographic purification (n-hexane/ethyl acetate 94:6) afforded the product as a colourless crystal.

Refinement

H atoms were positioned geometrically and refined using riding model with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic C—H, C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for CH2, C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C) for CH3.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I), with atom labels and 30% probability displacement ellipsoids for non-H atoms.

Crystal data

C16H14OS F(000) = 268
Mr = 254.33 Dx = 1.298 Mg m3
Monoclinic, Pc Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P -2yc Cell parameters from 4241 reflections
a = 8.0158 (6) Å θ = 2.7–28.3°
b = 10.8230 (9) Å µ = 0.23 mm1
c = 8.1219 (6) Å T = 295 K
β = 112.563 (4)° Block, colourless
V = 650.68 (9) Å3 0.25 × 0.20 × 0.20 mm
Z = 2

Data collection

Bruker SMART APEXII CCD diffractometer 2946 independent reflections
Radiation source: fine-focus sealed tube 2721 reflections with I > 2σ(I)
graphite Rint = 0.171
Detector resolution: 0 pixels mm-1 θmax = 28.3°, θmin = 1.9°
ω and φ scans h = −10→9
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) k = −12→14
Tmin = 0.946, Tmax = 0.954 l = −10→10
6033 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.066 H-atom parameters constrained
wR(F2) = 0.176 w = 1/[σ2(Fo2) + (0.1211P)2 + 0.025P] where P = (Fo2 + 2Fc2)/3
S = 1.06 (Δ/σ)max < 0.001
2946 reflections Δρmax = 0.35 e Å3
164 parameters Δρmin = −0.48 e Å3
2 restraints Absolute structure: Flack (1983), 1337 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: −0.04 (11)

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.9043 (4) 0.0721 (3) 0.6766 (3) 0.0493 (6)
C2 1.0778 (5) 0.0242 (3) 0.7621 (4) 0.0607 (7)
H2 1.0969 −0.0510 0.8219 0.073*
C3 1.2203 (5) 0.0925 (4) 0.7547 (5) 0.0671 (9)
H3 1.3374 0.0627 0.8111 0.081*
C4 1.1926 (5) 0.2048 (4) 0.6648 (5) 0.0616 (7)
H4 1.2912 0.2494 0.6634 0.074*
C5 1.0204 (4) 0.2504 (3) 0.5777 (4) 0.0513 (6)
H5 1.0025 0.3250 0.5165 0.062*
C6 0.8728 (3) 0.1837 (2) 0.5821 (3) 0.0423 (5)
C7 0.6844 (3) 0.2155 (2) 0.5029 (3) 0.0433 (5)
C8 0.5818 (4) 0.1302 (3) 0.5405 (4) 0.0488 (5)
H8 0.4568 0.1362 0.5004 0.059*
C9 0.6202 (4) 0.3311 (3) 0.3944 (4) 0.0557 (6)
H9A 0.6662 0.3315 0.3000 0.067*
H9B 0.6716 0.4018 0.4703 0.067*
C10 0.4183 (4) 0.3466 (3) 0.3119 (3) 0.0497 (6)
C11 0.3305 (4) 0.4346 (3) 0.3745 (4) 0.0532 (6)
H11 0.3975 0.4844 0.4704 0.064*
C12 0.1454 (4) 0.4492 (3) 0.2967 (4) 0.0542 (6)
H12 0.0899 0.5101 0.3387 0.065*
C13 0.0417 (4) 0.3743 (3) 0.1570 (3) 0.0470 (6)
C14 0.1274 (4) 0.2862 (3) 0.0923 (3) 0.0517 (6)
H14 0.0605 0.2357 −0.0028 0.062*
C15 0.3130 (4) 0.2744 (3) 0.1708 (4) 0.0563 (7)
H15 0.3690 0.2153 0.1265 0.068*
C16 −0.2496 (5) 0.3249 (5) −0.0572 (6) 0.0793 (11)
H16A −0.2253 0.3485 −0.1597 0.119*
H16B −0.3746 0.3397 −0.0799 0.119*
H16C −0.2233 0.2386 −0.0332 0.119*
O1 −0.1408 (3) 0.3948 (3) 0.0910 (3) 0.0653 (6)
S1 0.70297 (12) 0.00836 (7) 0.67020 (11) 0.0601 (2)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0614 (14) 0.0440 (15) 0.0452 (11) −0.0010 (11) 0.0235 (10) −0.0009 (10)
C2 0.0703 (18) 0.0529 (17) 0.0552 (15) 0.0134 (14) 0.0201 (12) 0.0062 (12)
C3 0.0586 (16) 0.074 (2) 0.0644 (16) 0.0158 (15) 0.0191 (13) −0.0042 (15)
C4 0.0546 (14) 0.0643 (18) 0.0702 (15) −0.0037 (14) 0.0286 (12) −0.0104 (16)
C5 0.0569 (14) 0.0447 (14) 0.0579 (13) −0.0035 (11) 0.0283 (11) −0.0016 (10)
C6 0.0517 (12) 0.0365 (12) 0.0417 (9) −0.0009 (9) 0.0213 (9) −0.0032 (8)
C7 0.0511 (11) 0.0377 (12) 0.0430 (10) −0.0007 (10) 0.0203 (8) −0.0007 (9)
C8 0.0549 (13) 0.0414 (13) 0.0537 (11) −0.0035 (11) 0.0250 (10) −0.0008 (10)
C9 0.0563 (14) 0.0430 (15) 0.0645 (14) 0.0016 (12) 0.0196 (11) 0.0102 (12)
C10 0.0580 (14) 0.0403 (13) 0.0511 (12) 0.0057 (11) 0.0211 (10) 0.0068 (10)
C11 0.0699 (16) 0.0396 (14) 0.0490 (11) −0.0006 (12) 0.0218 (11) −0.0037 (10)
C12 0.0717 (17) 0.0425 (14) 0.0544 (12) 0.0106 (12) 0.0309 (12) −0.0033 (11)
C13 0.0583 (14) 0.0412 (13) 0.0447 (10) 0.0112 (10) 0.0233 (10) 0.0049 (9)
C14 0.0597 (14) 0.0473 (15) 0.0442 (10) 0.0103 (12) 0.0155 (10) −0.0068 (10)
C15 0.0633 (16) 0.0526 (17) 0.0528 (12) 0.0161 (12) 0.0221 (11) −0.0033 (11)
C16 0.0594 (19) 0.078 (3) 0.090 (2) 0.0062 (16) 0.0179 (17) −0.014 (2)
O1 0.0607 (12) 0.0675 (16) 0.0672 (12) 0.0173 (11) 0.0238 (9) −0.0048 (11)
S1 0.0723 (4) 0.0462 (4) 0.0659 (4) −0.0059 (3) 0.0312 (3) 0.0108 (3)

Geometric parameters (Å, °)

C1—C2 1.394 (5) C9—H9A 0.9700
C1—C6 1.401 (4) C9—H9B 0.9700
C1—S1 1.738 (3) C10—C15 1.376 (4)
C2—C3 1.381 (6) C10—C11 1.392 (4)
C2—H2 0.9300 C11—C12 1.380 (4)
C3—C4 1.391 (6) C11—H11 0.9300
C3—H3 0.9300 C12—C13 1.383 (4)
C4—C5 1.379 (5) C12—H12 0.9300
C4—H4 0.9300 C13—O1 1.369 (4)
C5—C6 1.398 (4) C13—C14 1.391 (4)
C5—H5 0.9300 C14—C15 1.381 (4)
C6—C7 1.438 (4) C14—H14 0.9300
C7—C8 1.347 (4) C15—H15 0.9300
C7—C9 1.503 (4) C16—O1 1.406 (5)
C8—S1 1.734 (3) C16—H16A 0.9600
C8—H8 0.9300 C16—H16B 0.9600
C9—C10 1.504 (4) C16—H16C 0.9600
C2—C1—C6 121.9 (3) C10—C9—H9B 108.5
C2—C1—S1 127.2 (3) H9A—C9—H9B 107.5
C6—C1—S1 110.9 (2) C15—C10—C11 117.3 (3)
C3—C2—C1 117.6 (3) C15—C10—C9 121.3 (3)
C3—C2—H2 121.2 C11—C10—C9 121.5 (3)
C1—C2—H2 121.2 C12—C11—C10 121.1 (3)
C2—C3—C4 121.5 (3) C12—C11—H11 119.4
C2—C3—H3 119.2 C10—C11—H11 119.4
C4—C3—H3 119.2 C11—C12—C13 120.7 (2)
C5—C4—C3 120.6 (3) C11—C12—H12 119.6
C5—C4—H4 119.7 C13—C12—H12 119.6
C3—C4—H4 119.7 O1—C13—C12 116.2 (2)
C4—C5—C6 119.5 (3) O1—C13—C14 124.9 (3)
C4—C5—H5 120.2 C12—C13—C14 118.9 (3)
C6—C5—H5 120.2 C15—C14—C13 119.3 (3)
C5—C6—C1 118.9 (3) C15—C14—H14 120.3
C5—C6—C7 128.2 (2) C13—C14—H14 120.3
C1—C6—C7 112.9 (2) C10—C15—C14 122.7 (3)
C8—C7—C6 111.2 (2) C10—C15—H15 118.7
C8—C7—C9 127.0 (3) C14—C15—H15 118.7
C6—C7—C9 121.8 (2) O1—C16—H16A 109.5
C7—C8—S1 114.3 (2) O1—C16—H16B 109.5
C7—C8—H8 122.9 H16A—C16—H16B 109.5
S1—C8—H8 122.9 O1—C16—H16C 109.5
C7—C9—C10 114.9 (2) H16A—C16—H16C 109.5
C7—C9—H9A 108.5 H16B—C16—H16C 109.5
C10—C9—H9A 108.5 C13—O1—C16 117.8 (3)
C7—C9—H9B 108.5 C8—S1—C1 90.76 (14)
C6—C1—C2—C3 1.6 (4) C6—C7—C9—C10 176.5 (2)
S1—C1—C2—C3 −178.0 (2) C7—C9—C10—C15 −71.9 (4)
C1—C2—C3—C4 −0.3 (5) C7—C9—C10—C11 108.3 (3)
C2—C3—C4—C5 −0.9 (5) C15—C10—C11—C12 −0.6 (4)
C3—C4—C5—C6 0.8 (5) C9—C10—C11—C12 179.2 (3)
C4—C5—C6—C1 0.5 (4) C10—C11—C12—C13 1.7 (4)
C4—C5—C6—C7 179.1 (3) C11—C12—C13—O1 179.0 (3)
C2—C1—C6—C5 −1.7 (4) C11—C12—C13—C14 −1.9 (4)
S1—C1—C6—C5 177.95 (19) O1—C13—C14—C15 −179.9 (3)
C2—C1—C6—C7 179.4 (3) C12—C13—C14—C15 1.1 (4)
S1—C1—C6—C7 −0.9 (3) C11—C10—C15—C14 −0.3 (5)
C5—C6—C7—C8 −178.0 (3) C9—C10—C15—C14 179.9 (3)
C1—C6—C7—C8 0.8 (3) C13—C14—C15—C10 0.0 (5)
C5—C6—C7—C9 1.7 (4) C12—C13—O1—C16 176.7 (3)
C1—C6—C7—C9 −179.6 (2) C14—C13—O1—C16 −2.4 (5)
C6—C7—C8—S1 −0.3 (3) C7—C8—S1—C1 −0.2 (2)
C9—C7—C8—S1 −179.9 (2) C2—C1—S1—C8 −179.7 (3)
C8—C7—C9—C10 −3.9 (4) C6—C1—S1—C8 0.6 (2)

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.
D—H···A D—H H···A D···A D—H···A
C14—H14···Cgi 0.93 2.83 3.617 (2) 143

Symmetry codes: (i) x−1, y, z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2551).

References

  1. Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
  2. Bonini, C., Chiummiento, L., Bonis, M. D., Funicello, M., Lupattelli, P., Suanno, G., Berti, F. & Campaner, P. (2005). Tetrahedron, 61, 6580–6583.
  3. Brault, L., Migianu, E., Neguesque, A., Battaglia, E., Bagrel, D. & Kirsch, G. (2005). Eur. J. Med. Chem.40, 757–760. [DOI] [PubMed]
  4. Bruker (2004). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  5. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  6. Gunasekaran, B., Sureshbabu, R., Mohanakrishnan, A. K., Chakkaravarthi, G. & Manivannan, V. (2009). Acta Cryst. E65, o2455. [DOI] [PMC free article] [PubMed]
  7. Isloora, A. M., Kalluraya, B. & Sridhar Pai, K. (2010). Eur. J. Med. Chem., 45, 825–830. [DOI] [PubMed]
  8. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  9. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  10. Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
  11. Umadevi, M., Sureshbabu, R., Mohanakrishnan, A. K., Chakkaravarthi, G. & Manivannan, V. (2009). Acta Cryst. E65, o2790. [DOI] [PMC free article] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018866/is2551sup1.cif

e-66-o1449-sup1.cif (16.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018866/is2551Isup2.hkl

e-66-o1449-Isup2.hkl (141.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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