Abstract
The title molecule, C12H11N3O4, is essentially planar, the r.m.s. deviation for all non-H atoms being 0.068 Å. An intramolecular C—H⋯N hydrogen bond occurs. The crystal packing is dominated by π–π interactions [shortest centroid–centroid distance = 3.6312 (16) Å], which lead to supramolecular chains that are linked into a three-dimensional network via C—H⋯O contacts. The crystal was found to be a non-merohedral twin (twin law −1 0 0/0 −1 0/ 0.784 0 1), the fractional contribution of the minor component being approximately 22%.
Related literature
For the synthesis, synthetic uses and properties of 4-(N,N-dimethylaminomethylene)-2-aryl-2-oxazolin-5-one derivatives, see: Singh & Singh (1994 ▶, 2008 ▶); Takahashi & Izawa (2005 ▶); Singh et al. (1994 ▶); Kmetic & Stanovnik (1995 ▶). For the Vilsmeier–Haack reaction, see: Meth-Cohn & Stanforth (1991 ▶). For related structures, see Vasuki et al. (2002 ▶); Vijayalakshmi et al. (1998 ▶). For the treatment of twinned diffraction data, see: Spek (2009 ▶).
Experimental
Crystal data
C12H11N3O4
M r = 261.24
Monoclinic,
a = 9.5313 (2) Å
b = 9.5204 (3) Å
c = 13.0349 (4) Å
β = 106.661 (2)°
V = 1133.15 (6) Å3
Z = 4
Mo Kα radiation
μ = 0.12 mm−1
T = 120 K
0.42 × 0.38 × 0.22 mm
Data collection
Nonius KappaCCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.661, T max = 1.000
14210 measured reflections
2581 independent reflections
2030 reflections with I > 2σ(I)
R int = 0.071
Refinement
R[F 2 > 2σ(F 2)] = 0.065
wR(F 2) = 0.220
S = 1.19
2581 reflections
176 parameters
H-atom parameters constrained
Δρmax = 0.33 e Å−3
Δρmin = −0.30 e Å−3
Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018635/ez2209sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018635/ez2209Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C5—H5c⋯N1 | 0.98 | 2.28 | 3.074 (5) | 137 |
| C5—H5a⋯O2i | 0.98 | 2.53 | 3.504 (4) | 177 |
| C5—H5c⋯O4ii | 0.98 | 2.57 | 3.259 (5) | 127 |
| C9—H9⋯O1iii | 0.95 | 2.56 | 3.304 (4) | 135 |
| C11—H11⋯O2iv | 0.95 | 2.45 | 3.144 (4) | 130 |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
.
Acknowledgments
The use of the EPSRC X-ray crystallographic service at the University of Southampton, England, and the valuable assistance of the staff there is gratefully acknowledged. JLW acknowledges support from CAPES (Brazil).
supplementary crystallographic information
Comment
The preparations of 4-(N,N-dimethylaminomethylene)-2-aryl-2-oxazolin-5-one derivatives have been reported using the Vilsmeier-Haack reactions (Meth-Cohn & Stanforth, 1991) of acylaminoacetanilides with POCl3 and DMF (Singh & Singh, 1994; Takahashi & Izawa, 2005; Singh et al., 1994; Kmetic & Stanovnik, 1995). The compounds have been used as precursors of 4-hydroxymethylene-2-aryl-2-oxazolin-5-one, which have been tested for anti-bacterial activities (Singh & Singh, 2008). The crystal structures of 4-(N,N-dimethylaminomethylene)-2-phenyl-2-oxazolin-5-one (Vasuki et al., 2002) and 4-(N,N-dimethylaminomethylene)-2-(2-nitrophenyl)-2-oxazolin-5-one (Vijayalakshmi et al., 1998) have been reported. We now report the crystal structure of 4-(N,N-dimethylaminomethylene)-2-(4-nitrophenyl)-2-oxazolin-5-one, (I).
The molecule of (I), Fig. 1, is essentially planar with the maximum deviations from the least-squares plane through all non-hydrogen atoms being 0.157 (4) Å for atom C5 and -0.158 (3) for atom O4; the r.m.s. = 0.068 Å. The sequence of C1–N1, N1–C2, C2–C4, and C4–N2 bond distances of 1.289 (4), 1.398 (4), 1.382 (5), and 1.317 (4) Å, respectively, indicate substantial delocalisation of π-electron density over these atoms. The geometric parameters in (I) match closely those found in the parent compound, namely 4-(N,N-dimethylaminomethylene)-2-phenyl-2-oxazolin-5-one (Vasuki et al., 2002) and in the 2-nitro derivative (Vijayalakshmi et al., 1998).
The crystal packing is dominated by C–H···O and π–π interactions; the N1 atom of the oxazolin-5-one is involved in an intramolecular C–H···N contact that shields this atom from forming intermolecular interactions, Table 1. Columns of molecules orientated along the b axis are stabilised by π–π contacts with the shortest of these occurring between centrosymmetrically related benzene rings [ring centroid(C7–C12)···ring centroid(C7–C12)i = 3.6312 (16) Å for i: 1-x, 1-y, 2-z]. The benzene rings also form π–π interactions with the oxazolin-5-one rings [ring centroid(C7–C12)···ring centroid(O1,N1,C1–C3)ii = 3.7645 (17) Å for ii: 1-x, -y, 2-z] to form a supramolecular chain, Fig. 2. The chains are connected by a series of C–H···O contacts, Table 1, to form a 3-D network, Fig. 3.
Experimental
The title compound was prepared as per published procedures (Singh & Singh, 1994; Singh et al., 1994). Physical properties were in agreement with published data. The crystal used in the structure determination was grown from EtOH solution.
Refinement
The C-bound H atoms were geometrically placed (C–H = 0.95–0.98 Å) and refined as riding with Uiso(H) = 1.2–1.5Ueq(C). For the treatment of twinned diffraction data, see: Spek (2009).
Figures
Fig. 1.
The molecular structure of (I) showing the atom-labelling scheme and displacement ellipsoids at the 50% probability level.
Fig. 2.
A view of the supramolecular chain aligned along the b axis in (I) sustained by π–π intercations (purple dashed lines). Colour code: O, red; N, blue; C, grey; and H, green.
Fig. 3.
View of the connections between chains in (I) with the C–H···O interactions shown as orange dashed lines. Colour code: O, red; N, blue; C, grey; and H, green.
Crystal data
| C12H11N3O4 | F(000) = 544 |
| Mr = 261.24 | Dx = 1.531 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2714 reflections |
| a = 9.5313 (2) Å | θ = 2.9–27.5° |
| b = 9.5204 (3) Å | µ = 0.12 mm−1 |
| c = 13.0349 (4) Å | T = 120 K |
| β = 106.661 (2)° | Block, red |
| V = 1133.15 (6) Å3 | 0.42 × 0.38 × 0.22 mm |
| Z = 4 |
Data collection
| Nonius KappaCCD area-detector diffractometer | 2581 independent reflections |
| Radiation source: Enraf Nonius FR591 rotating anode | 2030 reflections with I > 2σ(I) |
| 10 cm confocal mirrors | Rint = 0.071 |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.4°, θmin = 3.1° |
| φ and ω scans | h = −12→12 |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2007) | k = −12→11 |
| Tmin = 0.661, Tmax = 1.000 | l = −16→16 |
| 14210 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.065 | H-atom parameters constrained |
| wR(F2) = 0.220 | w = 1/[σ2(Fo2) + (0.0936P)2 + 1.6594P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.19 | (Δ/σ)max = 0.001 |
| 2581 reflections | Δρmax = 0.33 e Å−3 |
| 176 parameters | Δρmin = −0.30 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.018 (5) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.3806 (2) | 0.5986 (2) | 0.33548 (17) | 0.0197 (5) | |
| O2 | 0.2556 (3) | 0.4481 (2) | 0.20576 (17) | 0.0239 (6) | |
| O3 | 0.8419 (3) | 1.1001 (3) | 0.6327 (2) | 0.0324 (6) | |
| O4 | 0.7443 (3) | 1.0746 (3) | 0.76142 (19) | 0.0307 (6) | |
| N1 | 0.2875 (3) | 0.5457 (3) | 0.4711 (2) | 0.0180 (6) | |
| N2 | 0.0528 (3) | 0.3059 (3) | 0.4441 (2) | 0.0203 (6) | |
| N3 | 0.7556 (3) | 1.0430 (3) | 0.6733 (2) | 0.0209 (6) | |
| C1 | 0.3786 (3) | 0.6220 (3) | 0.4393 (2) | 0.0166 (6) | |
| C2 | 0.2186 (3) | 0.4617 (3) | 0.3831 (2) | 0.0179 (6) | |
| C3 | 0.2761 (3) | 0.4921 (3) | 0.2958 (2) | 0.0195 (7) | |
| C4 | 0.1130 (3) | 0.3590 (3) | 0.3735 (2) | 0.0189 (7) | |
| H4 | 0.0778 | 0.3199 | 0.3038 | 0.023* | |
| C5 | 0.0939 (4) | 0.3462 (4) | 0.5569 (3) | 0.0237 (7) | |
| H5A | 0.1378 | 0.2655 | 0.6012 | 0.036* | |
| H5B | 0.0066 | 0.3768 | 0.5761 | 0.036* | |
| H5C | 0.1649 | 0.4233 | 0.5691 | 0.036* | |
| C6 | −0.0548 (4) | 0.1947 (4) | 0.4138 (3) | 0.0284 (8) | |
| H6A | −0.0780 | 0.1778 | 0.3366 | 0.043* | |
| H6B | −0.1440 | 0.2223 | 0.4317 | 0.043* | |
| H6C | −0.0152 | 0.1086 | 0.4526 | 0.043* | |
| C7 | 0.4765 (3) | 0.7290 (3) | 0.4994 (2) | 0.0168 (6) | |
| C8 | 0.4797 (3) | 0.7571 (3) | 0.6051 (2) | 0.0184 (6) | |
| H8 | 0.4184 | 0.7056 | 0.6375 | 0.022* | |
| C9 | 0.5715 (3) | 0.8590 (3) | 0.6624 (2) | 0.0185 (6) | |
| H9 | 0.5735 | 0.8794 | 0.7342 | 0.022* | |
| C10 | 0.6608 (3) | 0.9314 (3) | 0.6135 (2) | 0.0178 (6) | |
| C11 | 0.6608 (3) | 0.9058 (3) | 0.5089 (2) | 0.0173 (6) | |
| H11 | 0.7231 | 0.9571 | 0.4772 | 0.021* | |
| C12 | 0.5676 (3) | 0.8035 (3) | 0.4519 (2) | 0.0175 (6) | |
| H12 | 0.5655 | 0.7838 | 0.3800 | 0.021* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0239 (12) | 0.0203 (11) | 0.0177 (11) | −0.0022 (9) | 0.0105 (9) | −0.0010 (8) |
| O2 | 0.0307 (13) | 0.0242 (12) | 0.0187 (11) | −0.0017 (10) | 0.0100 (10) | −0.0029 (9) |
| O3 | 0.0323 (14) | 0.0382 (15) | 0.0291 (13) | −0.0147 (12) | 0.0127 (11) | −0.0044 (11) |
| O4 | 0.0397 (15) | 0.0328 (14) | 0.0219 (12) | −0.0061 (12) | 0.0125 (11) | −0.0075 (10) |
| N1 | 0.0195 (13) | 0.0171 (12) | 0.0183 (13) | 0.0003 (10) | 0.0067 (10) | 0.0004 (10) |
| N2 | 0.0209 (13) | 0.0163 (13) | 0.0248 (13) | 0.0015 (11) | 0.0082 (11) | 0.0025 (10) |
| N3 | 0.0219 (13) | 0.0210 (13) | 0.0195 (13) | 0.0017 (12) | 0.0056 (11) | 0.0024 (11) |
| C1 | 0.0193 (14) | 0.0179 (14) | 0.0143 (13) | 0.0046 (12) | 0.0073 (11) | 0.0029 (11) |
| C2 | 0.0198 (15) | 0.0172 (14) | 0.0173 (14) | 0.0032 (12) | 0.0065 (12) | 0.0009 (11) |
| C3 | 0.0218 (15) | 0.0165 (14) | 0.0207 (15) | 0.0022 (12) | 0.0068 (12) | 0.0030 (12) |
| C4 | 0.0222 (16) | 0.0156 (14) | 0.0198 (15) | 0.0042 (12) | 0.0076 (12) | 0.0024 (11) |
| C5 | 0.0270 (17) | 0.0235 (16) | 0.0246 (16) | 0.0024 (14) | 0.0136 (14) | 0.0033 (13) |
| C6 | 0.0247 (17) | 0.0210 (16) | 0.039 (2) | −0.0050 (14) | 0.0077 (15) | 0.0059 (14) |
| C7 | 0.0182 (15) | 0.0145 (14) | 0.0185 (14) | 0.0035 (12) | 0.0062 (12) | 0.0022 (11) |
| C8 | 0.0201 (15) | 0.0188 (15) | 0.0184 (14) | 0.0018 (12) | 0.0089 (12) | 0.0040 (12) |
| C9 | 0.0215 (15) | 0.0193 (15) | 0.0158 (13) | 0.0052 (13) | 0.0070 (12) | 0.0030 (12) |
| C10 | 0.0174 (14) | 0.0152 (14) | 0.0198 (15) | 0.0025 (12) | 0.0036 (12) | −0.0005 (11) |
| C11 | 0.0180 (14) | 0.0175 (14) | 0.0178 (14) | 0.0023 (12) | 0.0073 (11) | 0.0035 (11) |
| C12 | 0.0193 (14) | 0.0184 (14) | 0.0169 (14) | 0.0029 (12) | 0.0086 (12) | 0.0014 (11) |
Geometric parameters (Å, °)
| O1—C1 | 1.377 (3) | C5—H5B | 0.9800 |
| O1—C3 | 1.411 (4) | C5—H5C | 0.9800 |
| O2—C3 | 1.209 (4) | C6—H6A | 0.9800 |
| O3—N3 | 1.226 (4) | C6—H6B | 0.9800 |
| O4—N3 | 1.222 (4) | C6—H6C | 0.9800 |
| N1—C1 | 1.289 (4) | C7—C8 | 1.394 (4) |
| N1—C2 | 1.398 (4) | C7—C12 | 1.396 (4) |
| N2—C4 | 1.317 (4) | C8—C9 | 1.375 (4) |
| N2—C6 | 1.448 (4) | C8—H8 | 0.9500 |
| N2—C5 | 1.460 (4) | C9—C10 | 1.385 (4) |
| N3—C10 | 1.466 (4) | C9—H9 | 0.9500 |
| C1—C7 | 1.450 (4) | C10—C11 | 1.385 (4) |
| C2—C4 | 1.382 (5) | C11—C12 | 1.383 (4) |
| C2—C3 | 1.428 (4) | C11—H11 | 0.9500 |
| C4—H4 | 0.9500 | C12—H12 | 0.9500 |
| C5—H5A | 0.9800 | ||
| C1—O1—C3 | 105.6 (2) | H5B—C5—H5C | 109.5 |
| C1—N1—C2 | 105.0 (2) | N2—C6—H6A | 109.5 |
| C4—N2—C6 | 120.5 (3) | N2—C6—H6B | 109.5 |
| C4—N2—C5 | 123.9 (3) | H6A—C6—H6B | 109.5 |
| C6—N2—C5 | 115.5 (3) | N2—C6—H6C | 109.5 |
| O4—N3—O3 | 123.2 (3) | H6A—C6—H6C | 109.5 |
| O4—N3—C10 | 118.1 (3) | H6B—C6—H6C | 109.5 |
| O3—N3—C10 | 118.7 (3) | C8—C7—C12 | 120.0 (3) |
| N1—C1—O1 | 115.2 (3) | C8—C7—C1 | 119.8 (3) |
| N1—C1—C7 | 127.6 (3) | C12—C7—C1 | 120.2 (3) |
| O1—C1—C7 | 117.2 (3) | C9—C8—C7 | 120.2 (3) |
| C4—C2—N1 | 129.6 (3) | C9—C8—H8 | 119.9 |
| C4—C2—C3 | 120.5 (3) | C7—C8—H8 | 119.9 |
| N1—C2—C3 | 109.9 (3) | C8—C9—C10 | 118.7 (3) |
| O2—C3—O1 | 120.4 (3) | C8—C9—H9 | 120.7 |
| O2—C3—C2 | 135.4 (3) | C10—C9—H9 | 120.7 |
| O1—C3—C2 | 104.3 (2) | C11—C10—C9 | 122.7 (3) |
| N2—C4—C2 | 131.3 (3) | C11—C10—N3 | 118.5 (3) |
| N2—C4—H4 | 114.4 | C9—C10—N3 | 118.8 (3) |
| C2—C4—H4 | 114.4 | C12—C11—C10 | 118.1 (3) |
| N2—C5—H5A | 109.5 | C12—C11—H11 | 120.9 |
| N2—C5—H5B | 109.5 | C10—C11—H11 | 120.9 |
| H5A—C5—H5B | 109.5 | C11—C12—C7 | 120.4 (3) |
| N2—C5—H5C | 109.5 | C11—C12—H12 | 119.8 |
| H5A—C5—H5C | 109.5 | C7—C12—H12 | 119.8 |
| C2—N1—C1—O1 | −0.3 (3) | O1—C1—C7—C8 | −179.8 (3) |
| C2—N1—C1—C7 | 179.1 (3) | N1—C1—C7—C12 | −179.3 (3) |
| C3—O1—C1—N1 | −0.1 (3) | O1—C1—C7—C12 | 0.1 (4) |
| C3—O1—C1—C7 | −179.5 (3) | C12—C7—C8—C9 | 0.6 (5) |
| C1—N1—C2—C4 | 178.8 (3) | C1—C7—C8—C9 | −179.5 (3) |
| C1—N1—C2—C3 | 0.5 (3) | C7—C8—C9—C10 | −0.7 (5) |
| C1—O1—C3—O2 | −178.9 (3) | C8—C9—C10—C11 | 0.4 (5) |
| C1—O1—C3—C2 | 0.4 (3) | C8—C9—C10—N3 | 178.2 (3) |
| C4—C2—C3—O2 | 0.1 (6) | O4—N3—C10—C11 | 172.7 (3) |
| N1—C2—C3—O2 | 178.6 (4) | O3—N3—C10—C11 | −7.1 (4) |
| C4—C2—C3—O1 | −179.1 (3) | O4—N3—C10—C9 | −5.1 (4) |
| N1—C2—C3—O1 | −0.6 (3) | O3—N3—C10—C9 | 175.0 (3) |
| C6—N2—C4—C2 | −178.4 (3) | C9—C10—C11—C12 | −0.1 (5) |
| C5—N2—C4—C2 | −2.4 (5) | N3—C10—C11—C12 | −177.9 (3) |
| N1—C2—C4—N2 | −3.9 (6) | C10—C11—C12—C7 | 0.1 (4) |
| C3—C2—C4—N2 | 174.2 (3) | C8—C7—C12—C11 | −0.3 (4) |
| N1—C1—C7—C8 | 0.9 (5) | C1—C7—C12—C11 | 179.8 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C5—H5c···N1 | 0.98 | 2.28 | 3.074 (5) | 137 |
| C5—H5a···O2i | 0.98 | 2.53 | 3.504 (4) | 177 |
| C5—H5c···O4ii | 0.98 | 2.57 | 3.259 (5) | 127 |
| C9—H9···O1iii | 0.95 | 2.56 | 3.304 (4) | 135 |
| C11—H11···O2iv | 0.95 | 2.45 | 3.144 (4) | 130 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, y−1/2, −z+3/2; (iii) x, −y+3/2, z+1/2; (iv) −x+1, y+1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: EZ2209).
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018635/ez2209sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018635/ez2209Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report



