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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 May 29;66(Pt 6):o1519. doi: 10.1107/S1600536810019641

Bis(benzyl­sulfan­yl)methane

Hojin Yang a, Tae Ho Kim a,*, Suk-Hee Moon b, Jineun Kim a,*
PMCID: PMC2979583  PMID: 21579577

Abstract

In the title compound, C15H16S2, the structure of the dithioalkyl chain is a helix with an all-cis conformation. The dihedral angle between the mean planes of the terminal aromatic rings is 74.60 (4)°. In the crystal structure, weak C—H⋯π inter­actions contribute to the stabilization of the packing.

Related literature

For the synthesis of the title ligand, see: Cohen et al. (1980). For related structures, see: Li et al. (2005); Tanaka & Ajiki (2005).graphic file with name e-66-o1519-scheme1.jpg

Experimental

Crystal data

  • C15H16S2

  • M r = 260.40

  • Monoclinic, Inline graphic

  • a = 5.5146 (1) Å

  • b = 12.2628 (3) Å

  • c = 20.0128 (5) Å

  • β = 101.156 (1)°

  • V = 1327.78 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.38 mm−1

  • T = 173 K

  • 0.22 × 0.15 × 0.15 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.922, T max = 0.946

  • 12942 measured reflections

  • 3335 independent reflections

  • 2977 reflections with I > 2σ(I)

  • R int = 0.033

Refinement

  • R[F 2 > 2σ(F 2)] = 0.031

  • wR(F 2) = 0.082

  • S = 1.04

  • 3335 reflections

  • 155 parameters

  • H-atom parameters constrained

  • Δρmax = 0.30 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: APEX2 (Bruker, 2006); cell refinement: SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810019641/sj5008sup1.cif

e-66-o1519-sup1.cif (17.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019641/sj5008Isup2.hkl

e-66-o1519-Isup2.hkl (163.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg is the centroid of the C1–C6 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C13—H13⋯Cgi 0.95 2.85 3.71 151

Symmetry code: (i) Inline graphic.

Acknowledgments

This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology (No. 2010-0016386).

supplementary crystallographic information

Comment

Dithio acetals (RSCH2SR) have received considerable attention in the literature (Li et al., 2005; Tanaka & Ajiki, 2005). We report herein the crystal structure of the title compound. In asymmetric unit, the conformation of dithioalkyl chain is all cis and the dihedral angle between the aromatic rings is 74.60 (4)°. In the crystal structure (Fig. 1), the bond lengths and angles are within normal ranges.

A weak C13—H13···Cg = 2.85 Å interaction (Cg is the centroid of the C1···C6 ring) is observed, Table 1. Weak intermolecular S···S interactions with 3.4732 (6)Å also exist. These intermolecular interactions may be effective in the stabilization of the structure, Fig. 2.

Experimental

The title compound was synthesised according to the published procedure (Cohen et al., 1980) and recrystallized from petroleum ether.

Refinement

All H-atoms were positioned geometrically and refined using a riding model with d(C—H) = 0.95 Å, Uiso =1.2Ueq(C) for aromatic and 0.99 Å, Uiso = 1.2Ueq(C) for the CH2 atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Intermolecular C—H···π (red dotted lines) and S···S (green dotted lines) interactions in the title compound. All H atoms except those related to intermolecular interactions have been omitted for clarity. Cg is the centroid of the C1/C2/C3/C4/C5/C6 ring. [Symmetry codes: (i) x, -1+y, z]

Crystal data

C15H16S2 F(000) = 552
Mr = 260.40 Dx = 1.303 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 7825 reflections
a = 5.5146 (1) Å θ = 2.7–28.4°
b = 12.2628 (3) Å µ = 0.38 mm1
c = 20.0128 (5) Å T = 173 K
β = 101.156 (1)° Block, colourless
V = 1327.78 (5) Å3 0.22 × 0.15 × 0.15 mm
Z = 4

Data collection

Bruker APEXII CCD diffractometer 3335 independent reflections
Radiation source: fine-focus sealed tube 2977 reflections with I > 2σ(I)
graphite Rint = 0.033
Detector resolution: 10.0 pixels mm-1 θmax = 28.4°, θmin = 2.0°
φ and ω scans h = −7→7
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) k = −12→16
Tmin = 0.922, Tmax = 0.946 l = −24→26
12942 measured reflections

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031 H-atom parameters constrained
wR(F2) = 0.082 w = 1/[σ2(Fo2) + (0.0369P)2 + 0.4363P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max < 0.001
3335 reflections Δρmax = 0.30 e Å3
155 parameters Δρmin = −0.29 e Å3
0 restraints Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.030 (2)

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.63212 (6) 0.46872 (3) 0.430321 (16) 0.03123 (10)
S2 0.80471 (6) 0.43167 (3) 0.294901 (16) 0.03327 (11)
C1 0.7958 (2) 0.73297 (11) 0.47700 (6) 0.0318 (3)
H1 0.6990 0.7130 0.5095 0.038*
C2 0.9857 (3) 0.80750 (11) 0.49456 (7) 0.0369 (3)
H2 1.0197 0.8377 0.5391 0.044*
C3 1.1262 (3) 0.83815 (11) 0.44745 (8) 0.0376 (3)
H3 1.2579 0.8887 0.4597 0.045*
C4 1.0740 (3) 0.79496 (11) 0.38253 (7) 0.0371 (3)
H4 1.1678 0.8170 0.3498 0.045*
C5 0.8848 (2) 0.71936 (11) 0.36495 (6) 0.0324 (3)
H5 0.8508 0.6897 0.3203 0.039*
C6 0.7447 (2) 0.68671 (10) 0.41215 (6) 0.0269 (2)
C7 0.5451 (2) 0.60237 (11) 0.39470 (7) 0.0319 (3)
H7A 0.4995 0.5959 0.3445 0.038*
H7B 0.3970 0.6276 0.4114 0.038*
C8 0.8761 (2) 0.43180 (11) 0.38662 (7) 0.0303 (3)
H8A 0.9344 0.3579 0.4019 0.036*
H8B 1.0158 0.4826 0.4014 0.036*
C9 0.5351 (2) 0.34398 (11) 0.27868 (6) 0.0320 (3)
H9A 0.3992 0.3808 0.2956 0.038*
H9B 0.4822 0.3351 0.2288 0.038*
C10 0.5717 (2) 0.23235 (10) 0.31064 (6) 0.0263 (2)
C11 0.7532 (2) 0.16136 (11) 0.29690 (6) 0.0309 (3)
H11 0.8598 0.1839 0.2675 0.037*
C12 0.7799 (2) 0.05829 (11) 0.32574 (7) 0.0327 (3)
H12 0.9041 0.0106 0.3158 0.039*
C13 0.6268 (2) 0.02439 (11) 0.36880 (7) 0.0324 (3)
H13 0.6452 −0.0463 0.3885 0.039*
C14 0.4464 (3) 0.09429 (11) 0.38292 (7) 0.0344 (3)
H14 0.3406 0.0716 0.4125 0.041*
C15 0.4196 (2) 0.19762 (11) 0.35389 (7) 0.0307 (3)
H15 0.2951 0.2451 0.3639 0.037*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.03604 (18) 0.02830 (18) 0.03133 (17) −0.00231 (12) 0.01147 (13) −0.00010 (12)
S2 0.04070 (19) 0.02943 (18) 0.03283 (17) −0.00462 (13) 0.01497 (13) 0.00064 (12)
C1 0.0353 (6) 0.0333 (7) 0.0270 (6) −0.0013 (5) 0.0064 (5) 0.0029 (5)
C2 0.0422 (7) 0.0336 (7) 0.0322 (6) −0.0033 (6) 0.0008 (5) 0.0007 (5)
C3 0.0336 (7) 0.0275 (7) 0.0505 (8) −0.0018 (5) 0.0048 (6) 0.0079 (6)
C4 0.0395 (7) 0.0316 (7) 0.0445 (7) 0.0056 (6) 0.0185 (6) 0.0113 (6)
C5 0.0390 (7) 0.0293 (6) 0.0299 (6) 0.0089 (5) 0.0093 (5) 0.0039 (5)
C6 0.0270 (6) 0.0240 (6) 0.0285 (5) 0.0060 (5) 0.0026 (4) 0.0028 (4)
C7 0.0269 (6) 0.0302 (6) 0.0368 (6) 0.0046 (5) 0.0018 (5) −0.0015 (5)
C8 0.0263 (6) 0.0291 (6) 0.0349 (6) 0.0019 (5) 0.0042 (5) 0.0005 (5)
C9 0.0345 (6) 0.0295 (6) 0.0302 (6) −0.0001 (5) 0.0019 (5) 0.0020 (5)
C10 0.0264 (5) 0.0257 (6) 0.0251 (5) −0.0019 (5) 0.0009 (4) −0.0029 (4)
C11 0.0309 (6) 0.0340 (7) 0.0288 (6) −0.0006 (5) 0.0085 (5) −0.0032 (5)
C12 0.0320 (6) 0.0297 (6) 0.0359 (6) 0.0043 (5) 0.0051 (5) −0.0072 (5)
C13 0.0355 (6) 0.0231 (6) 0.0364 (6) −0.0019 (5) 0.0011 (5) −0.0015 (5)
C14 0.0347 (7) 0.0305 (7) 0.0399 (7) −0.0041 (5) 0.0120 (5) 0.0012 (5)
C15 0.0277 (6) 0.0281 (6) 0.0374 (6) 0.0011 (5) 0.0087 (5) −0.0027 (5)

Geometric parameters (Å, °)

S1—C8 1.7988 (13) C7—H7B 0.9900
S1—C7 1.8144 (14) C8—H8A 0.9900
S2—C8 1.8013 (13) C8—H8B 0.9900
S2—C9 1.8125 (14) C9—C10 1.5079 (17)
C1—C2 1.3831 (19) C9—H9A 0.9900
C1—C6 1.3942 (17) C9—H9B 0.9900
C1—H1 0.9500 C10—C15 1.3841 (18)
C2—C3 1.383 (2) C10—C11 1.3934 (18)
C2—H2 0.9500 C11—C12 1.3854 (19)
C3—C4 1.381 (2) C11—H11 0.9500
C3—H3 0.9500 C12—C13 1.382 (2)
C4—C5 1.389 (2) C12—H12 0.9500
C4—H4 0.9500 C13—C14 1.383 (2)
C5—C6 1.3898 (18) C13—H13 0.9500
C5—H5 0.9500 C14—C15 1.3899 (19)
C6—C7 1.5016 (18) C14—H14 0.9500
C7—H7A 0.9900 C15—H15 0.9500
C8—S1—C7 101.67 (6) S2—C8—H8A 108.0
C8—S2—C9 101.13 (6) S1—C8—H8B 108.0
C2—C1—C6 120.80 (12) S2—C8—H8B 108.0
C2—C1—H1 119.6 H8A—C8—H8B 107.2
C6—C1—H1 119.6 C10—C9—S2 115.14 (9)
C1—C2—C3 120.19 (13) C10—C9—H9A 108.5
C1—C2—H2 119.9 S2—C9—H9A 108.5
C3—C2—H2 119.9 C10—C9—H9B 108.5
C4—C3—C2 119.65 (13) S2—C9—H9B 108.5
C4—C3—H3 120.2 H9A—C9—H9B 107.5
C2—C3—H3 120.2 C15—C10—C11 118.46 (12)
C3—C4—C5 120.26 (13) C15—C10—C9 119.80 (11)
C3—C4—H4 119.9 C11—C10—C9 121.73 (11)
C5—C4—H4 119.9 C12—C11—C10 120.68 (12)
C4—C5—C6 120.61 (12) C12—C11—H11 119.7
C4—C5—H5 119.7 C10—C11—H11 119.7
C6—C5—H5 119.7 C13—C12—C11 120.38 (12)
C5—C6—C1 118.46 (12) C13—C12—H12 119.8
C5—C6—C7 121.28 (11) C11—C12—H12 119.8
C1—C6—C7 120.25 (12) C12—C13—C14 119.43 (12)
C6—C7—S1 113.86 (8) C12—C13—H13 120.3
C6—C7—H7A 108.8 C14—C13—H13 120.3
S1—C7—H7A 108.8 C13—C14—C15 120.14 (13)
C6—C7—H7B 108.8 C13—C14—H14 119.9
S1—C7—H7B 108.8 C15—C14—H14 119.9
H7A—C7—H7B 107.7 C10—C15—C14 120.91 (12)
S1—C8—S2 117.33 (7) C10—C15—H15 119.5
S1—C8—H8A 108.0 C14—C15—H15 119.5
C6—C1—C2—C3 0.7 (2) C9—S2—C8—S1 −53.62 (9)
C1—C2—C3—C4 0.8 (2) C8—S2—C9—C10 −55.87 (11)
C2—C3—C4—C5 −1.4 (2) S2—C9—C10—C15 123.62 (11)
C3—C4—C5—C6 0.4 (2) S2—C9—C10—C11 −57.57 (14)
C4—C5—C6—C1 1.09 (18) C15—C10—C11—C12 0.22 (18)
C4—C5—C6—C7 −177.97 (12) C9—C10—C11—C12 −178.61 (11)
C2—C1—C6—C5 −1.67 (19) C10—C11—C12—C13 −0.15 (19)
C2—C1—C6—C7 177.40 (12) C11—C12—C13—C14 0.00 (19)
C5—C6—C7—S1 103.14 (12) C12—C13—C14—C15 0.1 (2)
C1—C6—C7—S1 −75.91 (14) C11—C10—C15—C14 −0.12 (18)
C8—S1—C7—C6 −64.96 (10) C9—C10—C15—C14 178.72 (12)
C7—S1—C8—S2 −56.40 (9) C13—C14—C15—C10 0.0 (2)

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C1–C6 ring.
D—H···A D—H H···A D···A D—H···A
C13—H13···Cgi 0.95 2.85 3.71 151

Symmetry codes: (i) x, y−1, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ5008).

References

  1. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2006). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Cohen, T., Ruffner, R. J., Shull, D. W., Fogel, E. R. & Falck, J. R. (1980). Org. Synth.59, 202–212.
  4. Li, J.-R., Bu, X.-H., Jiao, J., Du, X.-H. & Zhang, R.-H. (2005). Dalton Trans pp. 464–474. [DOI] [PubMed]
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Tanaka, K. & Ajiki, K. (2005). Org. Lett.7, 1537–1539. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810019641/sj5008sup1.cif

e-66-o1519-sup1.cif (17.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019641/sj5008Isup2.hkl

e-66-o1519-Isup2.hkl (163.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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