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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 May 22;66(Pt 6):o1411. doi: 10.1107/S1600536810018271

1-Decyl­indoline-2,3-dione

Khalil Mamari a, Hafid Zouihri b, El Mokhtar Essassi a, Seik Weng Ng c,*
PMCID: PMC2979628  PMID: 21579490

Abstract

In the title N-alkyl isatin, C18H25NO2, the isatin moiety is almost planar (r.m.s. deviation = 0.03 Å). C—C—C—C torsion angles of the decyl substituent indicate an all-antiperiplanar conformation.

Related literature

For background to N-substituted isatins and their derivatives, see: Bouhfid et al. (2008). For the crystal structures of two N-alkyl isatins, see: see: Miehe et al. (2003); Naumov et al. (2002).graphic file with name e-66-o1411-scheme1.jpg

Experimental

Crystal data

  • C18H25NO2

  • M r = 287.39

  • Monoclinic, Inline graphic

  • a = 22.7208 (3) Å

  • b = 4.7189 (1) Å

  • c = 15.8254 (1) Å

  • β = 106.827 (1)°

  • V = 1624.10 (4) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 200 K

  • 0.27 × 0.18 × 0.15 mm

Data collection

  • Bruker X8 APEXII diffractometer

  • 24714 measured reflections

  • 5240 independent reflections

  • 3869 reflections with I > 2σ(I)

  • R int = 0.028

Refinement

  • R[F 2 > 2σ(F 2)] = 0.046

  • wR(F 2) = 0.154

  • S = 1.03

  • 5240 reflections

  • 190 parameters

  • H-atom parameters constrained

  • Δρmax = 0.29 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018271/bt5274sup1.cif

e-66-o1411-sup1.cif (18.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018271/bt5274Isup2.hkl

e-66-o1411-Isup2.hkl (256.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

We thank Université Mohammed V-Agdal and the University of Malaya for supporting this study.

supplementary crystallographic information

Comment

N-Substituted isatins (Bouhfid et al., 2008) represent a large family of heterocyclic compounds reported to show a wide range of useful medicinal activities. These are readily synthesized by the reaction of isatin and an alkyl halide in the presence of a catalyst. The title decyl derivative (Scheme I, Fig. 1) has a particarly long hydrocarbon chain; the chain adopts a extended zigzag conformation.

The crystal structures of only few N-substituted isatins have been reported; these have only short hydrocarbon chains, e.g., methyl isatin (Miehe et al., 2003) and ethyl isatin (Naumov et al., 2002).

Experimental

To a solution of isatin (1 g, 6.8 mmol) dissolved in DMF(50 ml) was added 1-bromodecane (1.50 g, 6.8 mmol), potassium carbonate (1 g, 7.4 mmol) and a catalytic quantity of tetra-n-butylammonium bromide.The mixture was stirred for 48 h; the reaction was monitored by thin layer chromatography. The mixture was filtered and the solvent removed under vacuum. The solid that was obtained was recrystallized from ethanol to afford the title compound as orange crystals in 80% yield.

Refinement

H-atoms were placed in calculated positions (C–H 0.95–0.99 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2–1.5Ueq(C).

Figures

Fig. 1.

Fig. 1.

Anisotropic displacement ellipsoid plot (Barbour, 2001) of the title compound at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius.

Crystal data

C18H25NO2 F(000) = 624
Mr = 287.39 Dx = 1.175 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 7695 reflections
a = 22.7208 (3) Å θ = 2.6–30.8°
b = 4.7189 (1) Å µ = 0.08 mm1
c = 15.8254 (1) Å T = 200 K
β = 106.827 (1)° Prism, orange
V = 1624.10 (4) Å3 0.27 × 0.18 × 0.15 mm
Z = 4

Data collection

Bruker X8 APEXII diffractometer 3869 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.028
graphite θmax = 31.2°, θmin = 2.7°
φ and ω scans h = −31→33
24714 measured reflections k = −6→6
5240 independent reflections l = −23→23

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0928P)2 + 0.1263P] where P = (Fo2 + 2Fc2)/3
5240 reflections (Δ/σ)max = 0.001
190 parameters Δρmax = 0.29 e Å3
0 restraints Δρmin = −0.20 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.45133 (4) 1.1915 (2) 0.42722 (6) 0.0500 (2)
O2 0.35296 (4) 0.7723 (2) 0.35480 (5) 0.0532 (3)
N1 0.34580 (4) 0.78714 (18) 0.49718 (5) 0.03110 (19)
C1 0.37349 (4) 0.94803 (19) 0.57377 (6) 0.02594 (19)
C2 0.36083 (4) 0.9424 (2) 0.65378 (6) 0.0307 (2)
H2 0.3307 0.8180 0.6640 0.037*
C3 0.39391 (5) 1.1265 (2) 0.71908 (7) 0.0344 (2)
H3 0.3859 1.1275 0.7748 0.041*
C4 0.43815 (5) 1.3082 (2) 0.70538 (7) 0.0361 (2)
H4 0.4596 1.4322 0.7512 0.043*
C5 0.45126 (4) 1.3101 (2) 0.62509 (7) 0.0334 (2)
H5 0.4820 1.4320 0.6155 0.040*
C6 0.41840 (4) 1.1295 (2) 0.55931 (6) 0.0276 (2)
C7 0.42008 (4) 1.0850 (2) 0.46877 (6) 0.0337 (2)
C8 0.36942 (5) 0.8606 (2) 0.42990 (7) 0.0353 (2)
C9 0.29367 (4) 0.5981 (2) 0.48624 (8) 0.0352 (2)
H9A 0.2996 0.4841 0.5406 0.042*
H9B 0.2918 0.4661 0.4369 0.042*
C10 0.23300 (4) 0.7587 (2) 0.46748 (8) 0.0358 (2)
H10A 0.2329 0.8711 0.5202 0.043*
H10B 0.2299 0.8926 0.4182 0.043*
C11 0.17722 (5) 0.5653 (2) 0.44377 (8) 0.0357 (2)
H11A 0.1806 0.4294 0.4926 0.043*
H11B 0.1769 0.4551 0.3904 0.043*
C12 0.11684 (4) 0.7268 (2) 0.42654 (8) 0.0368 (2)
H12A 0.1163 0.8268 0.4813 0.044*
H12B 0.1151 0.8720 0.3807 0.044*
C13 0.05984 (4) 0.5417 (2) 0.39672 (8) 0.0375 (2)
H13A 0.0614 0.3963 0.4424 0.045*
H13B 0.0601 0.4421 0.3418 0.045*
C14 0.00008 (4) 0.7073 (2) 0.38011 (8) 0.0385 (2)
H14A −0.0003 0.8047 0.4353 0.046*
H14B −0.0011 0.8547 0.3352 0.046*
C15 −0.05752 (5) 0.5260 (3) 0.34891 (8) 0.0387 (2)
H15A −0.0573 0.4288 0.2936 0.046*
H15B −0.0565 0.3784 0.3938 0.046*
C16 −0.11691 (5) 0.6935 (3) 0.33263 (8) 0.0395 (3)
H16A −0.1171 0.7898 0.3881 0.047*
H16B −0.1177 0.8418 0.2881 0.047*
C17 −0.17475 (5) 0.5154 (3) 0.30097 (8) 0.0447 (3)
H17A −0.1748 0.4204 0.2452 0.054*
H17B −0.1739 0.3662 0.3453 0.054*
C18 −0.23353 (5) 0.6849 (3) 0.28575 (10) 0.0566 (4)
H18A −0.2690 0.5581 0.2657 0.085*
H18B −0.2353 0.8299 0.2407 0.085*
H18C −0.2343 0.7764 0.3410 0.085*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0417 (5) 0.0751 (6) 0.0390 (4) 0.0036 (4) 0.0209 (4) 0.0194 (4)
O2 0.0543 (5) 0.0716 (6) 0.0319 (4) 0.0113 (5) 0.0098 (4) −0.0109 (4)
N1 0.0264 (4) 0.0362 (4) 0.0297 (4) 0.0000 (3) 0.0065 (3) −0.0030 (3)
C1 0.0214 (4) 0.0288 (4) 0.0270 (4) 0.0035 (3) 0.0061 (3) 0.0038 (3)
C2 0.0274 (4) 0.0361 (5) 0.0309 (5) −0.0008 (4) 0.0122 (4) 0.0047 (4)
C3 0.0352 (5) 0.0422 (5) 0.0269 (5) 0.0028 (4) 0.0106 (4) 0.0015 (4)
C4 0.0332 (5) 0.0385 (5) 0.0337 (5) −0.0015 (4) 0.0050 (4) −0.0031 (4)
C5 0.0262 (4) 0.0347 (5) 0.0378 (5) −0.0025 (4) 0.0072 (4) 0.0055 (4)
C6 0.0220 (4) 0.0328 (5) 0.0290 (4) 0.0038 (3) 0.0089 (3) 0.0071 (3)
C7 0.0277 (4) 0.0452 (6) 0.0298 (5) 0.0099 (4) 0.0107 (4) 0.0108 (4)
C8 0.0312 (5) 0.0453 (6) 0.0291 (5) 0.0121 (4) 0.0085 (4) 0.0007 (4)
C9 0.0259 (4) 0.0311 (5) 0.0447 (6) 0.0003 (4) 0.0040 (4) −0.0051 (4)
C10 0.0260 (5) 0.0313 (5) 0.0464 (6) 0.0014 (4) 0.0045 (4) −0.0027 (4)
C11 0.0260 (4) 0.0335 (5) 0.0442 (6) 0.0002 (4) 0.0047 (4) −0.0039 (4)
C12 0.0260 (5) 0.0362 (5) 0.0454 (6) 0.0002 (4) 0.0057 (4) −0.0029 (4)
C13 0.0257 (5) 0.0385 (5) 0.0457 (6) −0.0002 (4) 0.0064 (4) −0.0040 (4)
C14 0.0253 (5) 0.0405 (6) 0.0471 (6) 0.0003 (4) 0.0064 (4) −0.0017 (5)
C15 0.0264 (5) 0.0429 (6) 0.0447 (6) −0.0003 (4) 0.0068 (4) −0.0052 (5)
C16 0.0264 (5) 0.0451 (6) 0.0451 (6) 0.0005 (4) 0.0072 (4) −0.0012 (5)
C17 0.0295 (5) 0.0528 (7) 0.0494 (7) −0.0040 (5) 0.0076 (5) −0.0083 (5)
C18 0.0265 (5) 0.0727 (9) 0.0673 (9) −0.0007 (6) 0.0081 (5) −0.0007 (7)

Geometric parameters (Å, °)

O1—C7 1.2080 (12) C11—H11A 0.9900
O2—C8 1.2118 (13) C11—H11B 0.9900
N1—C8 1.3684 (13) C12—C13 1.5196 (15)
N1—C1 1.4142 (12) C12—H12A 0.9900
N1—C9 1.4525 (13) C12—H12B 0.9900
C1—C2 1.3774 (13) C13—C14 1.5222 (14)
C1—C6 1.4007 (13) C13—H13A 0.9900
C2—C3 1.3919 (15) C13—H13B 0.9900
C2—H2 0.9500 C14—C15 1.5213 (14)
C3—C4 1.3852 (15) C14—H14A 0.9900
C3—H3 0.9500 C14—H14B 0.9900
C4—C5 1.3865 (15) C15—C16 1.5201 (15)
C4—H4 0.9500 C15—H15A 0.9900
C5—C6 1.3846 (14) C15—H15B 0.9900
C5—H5 0.9500 C16—C17 1.5173 (15)
C6—C7 1.4596 (13) C16—H16A 0.9900
C7—C8 1.5540 (17) C16—H16B 0.9900
C9—C10 1.5248 (14) C17—C18 1.5151 (17)
C9—H9A 0.9900 C17—H17A 0.9900
C9—H9B 0.9900 C17—H17B 0.9900
C10—C11 1.5181 (14) C18—H18A 0.9800
C10—H10A 0.9900 C18—H18B 0.9800
C10—H10B 0.9900 C18—H18C 0.9800
C11—C12 1.5233 (14)
C8—N1—C1 110.70 (8) H11A—C11—H11B 107.8
C8—N1—C9 123.56 (9) C13—C12—C11 114.23 (9)
C1—N1—C9 125.23 (8) C13—C12—H12A 108.7
C2—C1—C6 121.18 (9) C11—C12—H12A 108.7
C2—C1—N1 128.18 (9) C13—C12—H12B 108.7
C6—C1—N1 110.65 (8) C11—C12—H12B 108.7
C1—C2—C3 117.32 (9) H12A—C12—H12B 107.6
C1—C2—H2 121.3 C12—C13—C14 113.32 (9)
C3—C2—H2 121.3 C12—C13—H13A 108.9
C4—C3—C2 122.03 (9) C14—C13—H13A 108.9
C4—C3—H3 119.0 C12—C13—H13B 108.9
C2—C3—H3 119.0 C14—C13—H13B 108.9
C3—C4—C5 120.36 (10) H13A—C13—H13B 107.7
C3—C4—H4 119.8 C15—C14—C13 114.06 (9)
C5—C4—H4 119.8 C15—C14—H14A 108.7
C6—C5—C4 118.22 (9) C13—C14—H14A 108.7
C6—C5—H5 120.9 C15—C14—H14B 108.7
C4—C5—H5 120.9 C13—C14—H14B 108.7
C5—C6—C1 120.88 (9) H14A—C14—H14B 107.6
C5—C6—C7 131.68 (9) C16—C15—C14 113.61 (9)
C1—C6—C7 107.44 (9) C16—C15—H15A 108.8
O1—C7—C6 131.37 (11) C14—C15—H15A 108.8
O1—C7—C8 123.56 (10) C16—C15—H15B 108.8
C6—C7—C8 105.05 (8) C14—C15—H15B 108.8
O2—C8—N1 126.65 (11) H15A—C15—H15B 107.7
O2—C8—C7 127.25 (10) C17—C16—C15 114.17 (10)
N1—C8—C7 106.08 (8) C17—C16—H16A 108.7
N1—C9—C10 112.21 (8) C15—C16—H16A 108.7
N1—C9—H9A 109.2 C17—C16—H16B 108.7
C10—C9—H9A 109.2 C15—C16—H16B 108.7
N1—C9—H9B 109.2 H16A—C16—H16B 107.6
C10—C9—H9B 109.2 C18—C17—C16 113.55 (11)
H9A—C9—H9B 107.9 C18—C17—H17A 108.9
C11—C10—C9 113.10 (8) C16—C17—H17A 108.9
C11—C10—H10A 109.0 C18—C17—H17B 108.9
C9—C10—H10A 109.0 C16—C17—H17B 108.9
C11—C10—H10B 109.0 H17A—C17—H17B 107.7
C9—C10—H10B 109.0 C17—C18—H18A 109.5
H10A—C10—H10B 107.8 C17—C18—H18B 109.5
C10—C11—C12 112.81 (8) H18A—C18—H18B 109.5
C10—C11—H11A 109.0 C17—C18—H18C 109.5
C12—C11—H11A 109.0 H18A—C18—H18C 109.5
C10—C11—H11B 109.0 H18B—C18—H18C 109.5
C12—C11—H11B 109.0
C8—N1—C1—C2 177.81 (9) C1—N1—C8—O2 −175.80 (10)
C9—N1—C1—C2 5.74 (15) C9—N1—C8—O2 −3.58 (17)
C8—N1—C1—C6 −1.83 (11) C1—N1—C8—C7 2.68 (10)
C9—N1—C1—C6 −173.90 (9) C9—N1—C8—C7 174.90 (8)
C6—C1—C2—C3 0.75 (14) O1—C7—C8—O2 −3.09 (17)
N1—C1—C2—C3 −178.85 (9) C6—C7—C8—O2 175.90 (10)
C1—C2—C3—C4 −0.33 (15) O1—C7—C8—N1 178.44 (10)
C2—C3—C4—C5 −0.54 (16) C6—C7—C8—N1 −2.57 (10)
C3—C4—C5—C6 0.97 (15) C8—N1—C9—C10 −93.70 (12)
C4—C5—C6—C1 −0.55 (14) C1—N1—C9—C10 77.39 (12)
C4—C5—C6—C7 178.57 (10) N1—C9—C10—C11 172.33 (9)
C2—C1—C6—C5 −0.32 (14) C9—C10—C11—C12 179.09 (9)
N1—C1—C6—C5 179.35 (8) C10—C11—C12—C13 176.17 (10)
C2—C1—C6—C7 −179.63 (8) C11—C12—C13—C14 179.87 (9)
N1—C1—C6—C7 0.04 (10) C12—C13—C14—C15 179.16 (10)
C5—C6—C7—O1 1.18 (19) C13—C14—C15—C16 179.93 (10)
C1—C6—C7—O1 −179.61 (11) C14—C15—C16—C17 179.67 (10)
C5—C6—C7—C8 −177.70 (10) C15—C16—C17—C18 179.53 (11)
C1—C6—C7—C8 1.50 (10)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BT5274).

References

  1. Barbour, L. J. (2001). J. Supramol. Chem.1, 189–191.
  2. Bouhfid, R., Joly, N., Ohmani, F., Essassi, E. M., Massoui, M. & Martin, P. (2008). Lett. Org. Chem. pp. 3–7.
  3. Bruker (2008). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Miehe, G., Süsse, P., Kupcik, V., Egert, E., Nieger, M., Kunz, G., Gerke, R., Knieriem, B., Niemeyer, M. & Lüttke, W. (2003). Angew. Chem. Int. Ed. Engl.30, 964–967.
  5. Naumov, P., Anastasova, F., Drew, M. G. B. & Ng, S. W. (2002). Bull. Chem. Technol. Macedon.21, 165–169.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Westrip, S. P. (2010). J. Appl. Cryst.43 Submitted.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018271/bt5274sup1.cif

e-66-o1411-sup1.cif (18.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018271/bt5274Isup2.hkl

e-66-o1411-Isup2.hkl (256.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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