Abstract
In the title compound, C10H10N2O3, the dihedral angle between the benzene and imidazolidine rings is 6.0 (4)°, consistent with an essentially planar molecule. In the crystal, intermolecular N—H⋯O hydrogen bonding between centrosymmetrically related molecules leads to loosely associated dimeric aggregates. These are connected into a three-dimensional network by C—H⋯O interactions, as well as π–π interactions [centroid–centroid distances = 3.705 (3) and 3.622 (3) Å] between the imidazolidine and benzene rings.
Related literature
For related structures, see: Gerdil (1960 ▶). For the synthesis, see: Niwata et al. (1997 ▶); Kurzer et al. (1963 ▶).
Experimental
Crystal data
C10H10N2O3
M r = 206.20
Monoclinic,
a = 4.9993 (10) Å
b = 6.1566 (12) Å
c = 30.052 (6) Å
β = 93.91 (3)°
V = 922.8 (3) Å3
Z = 4
Mo Kα radiation
μ = 0.11 mm−1
T = 113 K
0.24 × 0.12 × 0.10 mm
Data collection
Rigaku Saturn CCD area-detector diffractometer
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.974, T max = 0.989
6955 measured reflections
2203 independent reflections
1507 reflections with I > 2σ(I)
R int = 0.078
Refinement
R[F 2 > 2σ(F 2)] = 0.064
wR(F 2) = 0.151
S = 1.05
2203 reflections
142 parameters
1 restraint
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.44 e Å−3
Δρmin = −0.40 e Å−3
Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810016478/tk2669sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016478/tk2669Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N1—H1⋯O1i | 0.91 (1) | 1.95 (1) | 2.8512 (19) | 172 (2) |
| C2—H2A⋯O2ii | 0.99 | 2.34 | 3.291 (2) | 160 |
| C8—H8⋯O2iii | 0.95 | 2.42 | 3.203 (2) | 140 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
This project was supported by the National Natural Science Foundation of China under contract No. 20972112 and the Tianjin Key Program of Natural Science Foundation of China under contract No. 09JCZDJC21600.
supplementary crystallographic information
Comment
During an investigation of new anti-diabetic drugs, we found that imidazolidinediones (IZD's) have good anti-diabetic activities. The crystal structure determination of the title compound, (I), was undertaken to investigate the relationship between structure and anti-diabetic activity.
In title compound, C10H10N2O3, bond lengths and angles are normal and in a good agreement with those reported previously (Gerdil, 1960). The dihedral angle between the benzene ring (C4—C9) and imidazolidine ring (C1—C3/N1/N2) is 6.0 (4) °. In the crystal packing, intermolecular N—H···O hydrogen bonding between centrosymmetrically related molecules lead to loosely associated dimeric aggregates, Table 1. These aggregates are connected into the 3-D crystal structure by C—H···O and π–π interactions, the latter occurring between the imidazolidine and benzene rings, Table 1.
Experimental
Compound (I) (1.13 g, 55% yield) was prepared according to the reported procedure of (Niwata et al., 1997), using 1-(4-methoxyphenyl)urea (0.010 mol; Kurzer et al., 1963), sodium hydride (0.022 mol), N,N-dimethylformamide (20 ml), and ethyl chloroacetate (0.0120 mol. Colourless single crystals suitable for X-ray diffraction analysis were obtained by recrystallization from a mixture of methanol and water (1:1 V/V).
Refinement
All C-bound H atoms were found on difference maps, but included in the final cycles of refinement using a riding model with C—H = 0.95–0.99 Å, and with Uiso(H) = 1.2Ueq(C) for aryl- and methylene-H atoms, and 1.5Ueq(C) for the methyl H atoms. The N–H1 atom was refined freely.
Figures
Fig. 1.
View of the title compound showing atom labelling, with displacement ellipsoids drawn at the 40% probability level.
Crystal data
| C10H10N2O3 | F(000) = 432 |
| Mr = 206.20 | Dx = 1.484 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 196 reflections |
| a = 4.9993 (10) Å | θ = 2.0–27.9° |
| b = 6.1566 (12) Å | µ = 0.11 mm−1 |
| c = 30.052 (6) Å | T = 113 K |
| β = 93.91 (3)° | Prism, colourless |
| V = 922.8 (3) Å3 | 0.24 × 0.12 × 0.10 mm |
| Z = 4 |
Data collection
| Rigaku Saturn CCD area-detector diffractometer | 2203 independent reflections |
| Radiation source: rotating anode | 1507 reflections with I > 2σ(I) |
| multilayer | Rint = 0.078 |
| Detector resolution: 7.31 pixels mm-1 | θmax = 27.9°, θmin = 2.7° |
| ω and φ scans | h = −6→4 |
| Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | k = −8→7 |
| Tmin = 0.974, Tmax = 0.989 | l = −34→39 |
| 6955 measured reflections |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.064 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.151 | w = 1/[σ2(Fo2) + (0.0718P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 1.05 | (Δ/σ)max = 0.001 |
| 2203 reflections | Δρmax = 0.44 e Å−3 |
| 142 parameters | Δρmin = −0.40 e Å−3 |
| 1 restraint | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 1.95 (8) |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.1590 (2) | 0.2744 (2) | 0.50596 (4) | 0.0270 (4) | |
| O2 | 0.4023 (2) | −0.2177 (2) | 0.40235 (4) | 0.0286 (4) | |
| O3 | 1.2460 (3) | 0.2947 (2) | 0.28363 (4) | 0.0303 (4) | |
| N1 | 0.2393 (3) | −0.0069 (2) | 0.45821 (5) | 0.0232 (4) | |
| N2 | 0.5536 (3) | 0.1341 (2) | 0.41800 (5) | 0.0217 (4) | |
| C1 | 0.2749 (3) | 0.1953 (3) | 0.47530 (6) | 0.0221 (4) | |
| C2 | 0.4866 (3) | 0.3027 (3) | 0.44955 (5) | 0.0213 (4) | |
| H2A | 0.4155 | 0.4340 | 0.4338 | 0.026* | |
| H2B | 0.6448 | 0.3433 | 0.4694 | 0.026* | |
| C3 | 0.4027 (3) | −0.0471 (3) | 0.42284 (6) | 0.0221 (4) | |
| C4 | 0.7341 (3) | 0.1737 (3) | 0.38439 (5) | 0.0209 (4) | |
| C5 | 0.7790 (3) | 0.0195 (3) | 0.35134 (6) | 0.0265 (4) | |
| H5 | 0.6900 | −0.1168 | 0.3514 | 0.032* | |
| C6 | 0.9526 (3) | 0.0659 (3) | 0.31876 (6) | 0.0272 (5) | |
| H6 | 0.9814 | −0.0391 | 0.2964 | 0.033* | |
| C7 | 1.0854 (3) | 0.2637 (3) | 0.31826 (6) | 0.0236 (4) | |
| C8 | 1.0464 (3) | 0.4155 (3) | 0.35116 (6) | 0.0244 (4) | |
| H8 | 1.1385 | 0.5505 | 0.3513 | 0.029* | |
| C9 | 0.8710 (3) | 0.3692 (3) | 0.38415 (6) | 0.0230 (4) | |
| H9 | 0.8452 | 0.4735 | 0.4068 | 0.028* | |
| C10 | 1.3963 (4) | 0.4914 (3) | 0.28380 (7) | 0.0339 (5) | |
| H10A | 1.2732 | 0.6153 | 0.2811 | 0.051* | |
| H10B | 1.5108 | 0.4915 | 0.2586 | 0.051* | |
| H10C | 1.5082 | 0.5027 | 0.3118 | 0.051* | |
| H1 | 0.113 (3) | −0.100 (3) | 0.4673 (7) | 0.045 (6)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0294 (7) | 0.0210 (8) | 0.0312 (7) | −0.0022 (5) | 0.0070 (5) | −0.0019 (6) |
| O2 | 0.0365 (7) | 0.0170 (8) | 0.0321 (7) | −0.0036 (5) | 0.0020 (5) | −0.0035 (5) |
| O3 | 0.0331 (7) | 0.0295 (9) | 0.0295 (7) | −0.0001 (5) | 0.0103 (5) | −0.0008 (6) |
| N1 | 0.0260 (7) | 0.0171 (9) | 0.0264 (8) | −0.0035 (5) | 0.0012 (6) | 0.0003 (6) |
| N2 | 0.0269 (8) | 0.0151 (8) | 0.0232 (8) | −0.0022 (5) | 0.0035 (6) | −0.0020 (6) |
| C1 | 0.0243 (8) | 0.0183 (10) | 0.0231 (8) | −0.0002 (6) | −0.0027 (6) | 0.0020 (7) |
| C2 | 0.0263 (8) | 0.0152 (9) | 0.0226 (9) | −0.0019 (6) | 0.0031 (6) | −0.0019 (7) |
| C3 | 0.0253 (8) | 0.0171 (10) | 0.0235 (9) | −0.0010 (6) | −0.0022 (6) | 0.0001 (7) |
| C4 | 0.0226 (8) | 0.0184 (10) | 0.0212 (8) | 0.0021 (6) | −0.0006 (6) | 0.0015 (7) |
| C5 | 0.0320 (9) | 0.0181 (10) | 0.0295 (10) | −0.0007 (7) | 0.0022 (7) | −0.0018 (7) |
| C6 | 0.0339 (10) | 0.0229 (10) | 0.0249 (9) | 0.0025 (7) | 0.0026 (7) | −0.0038 (8) |
| C7 | 0.0219 (9) | 0.0259 (11) | 0.0229 (9) | 0.0041 (6) | 0.0011 (6) | 0.0022 (7) |
| C8 | 0.0256 (9) | 0.0216 (10) | 0.0259 (9) | −0.0029 (6) | −0.0004 (7) | 0.0004 (7) |
| C9 | 0.0267 (9) | 0.0193 (10) | 0.0226 (8) | −0.0008 (6) | −0.0001 (6) | −0.0020 (7) |
| C10 | 0.0310 (10) | 0.0359 (13) | 0.0353 (11) | −0.0048 (8) | 0.0067 (8) | 0.0036 (9) |
Geometric parameters (Å, °)
| O1—C1 | 1.223 (2) | C4—C9 | 1.385 (2) |
| O2—C3 | 1.217 (2) | C4—C5 | 1.403 (2) |
| O3—C7 | 1.370 (2) | C5—C6 | 1.382 (2) |
| O3—C10 | 1.425 (2) | C5—H5 | 0.9500 |
| N1—C1 | 1.354 (2) | C6—C7 | 1.388 (3) |
| N1—C3 | 1.406 (2) | C6—H6 | 0.9500 |
| N1—H1 | 0.911 (10) | C7—C8 | 1.384 (2) |
| N2—C3 | 1.360 (2) | C8—C9 | 1.397 (2) |
| N2—C4 | 1.420 (2) | C8—H8 | 0.9500 |
| N2—C2 | 1.460 (2) | C9—H9 | 0.9500 |
| C1—C2 | 1.506 (2) | C10—H10A | 0.9800 |
| C2—H2A | 0.9900 | C10—H10B | 0.9800 |
| C2—H2B | 0.9900 | C10—H10C | 0.9800 |
| C7—O3—C10 | 116.85 (14) | C6—C5—C4 | 120.02 (17) |
| C1—N1—C3 | 112.37 (14) | C6—C5—H5 | 120.0 |
| C1—N1—H1 | 122.9 (15) | C4—C5—H5 | 120.0 |
| C3—N1—H1 | 124.5 (15) | C5—C6—C7 | 120.87 (17) |
| C3—N2—C4 | 126.92 (15) | C5—C6—H6 | 119.6 |
| C3—N2—C2 | 111.09 (14) | C7—C6—H6 | 119.6 |
| C4—N2—C2 | 121.66 (14) | O3—C7—C8 | 124.53 (17) |
| O1—C1—N1 | 126.52 (17) | O3—C7—C6 | 115.84 (16) |
| O1—C1—C2 | 126.75 (17) | C8—C7—C6 | 119.62 (16) |
| N1—C1—C2 | 106.72 (15) | C7—C8—C9 | 119.67 (17) |
| N2—C2—C1 | 102.84 (14) | C7—C8—H8 | 120.2 |
| N2—C2—H2A | 111.2 | C9—C8—H8 | 120.2 |
| C1—C2—H2A | 111.2 | C4—C9—C8 | 121.02 (16) |
| N2—C2—H2B | 111.2 | C4—C9—H9 | 119.5 |
| C1—C2—H2B | 111.2 | C8—C9—H9 | 119.5 |
| H2A—C2—H2B | 109.1 | O3—C10—H10A | 109.5 |
| O2—C3—N2 | 129.43 (17) | O3—C10—H10B | 109.5 |
| O2—C3—N1 | 123.60 (16) | H10A—C10—H10B | 109.5 |
| N2—C3—N1 | 106.95 (14) | O3—C10—H10C | 109.5 |
| C9—C4—C5 | 118.78 (16) | H10A—C10—H10C | 109.5 |
| C9—C4—N2 | 119.40 (15) | H10B—C10—H10C | 109.5 |
| C5—C4—N2 | 121.82 (16) | ||
| C3—N1—C1—O1 | 179.61 (16) | C3—N2—C4—C5 | −0.8 (3) |
| C3—N1—C1—C2 | −0.94 (18) | C2—N2—C4—C5 | −173.66 (15) |
| C3—N2—C2—C1 | 1.19 (18) | C9—C4—C5—C6 | −1.4 (2) |
| C4—N2—C2—C1 | 175.05 (14) | N2—C4—C5—C6 | 178.85 (15) |
| O1—C1—C2—N2 | 179.32 (16) | C4—C5—C6—C7 | 0.3 (3) |
| N1—C1—C2—N2 | −0.13 (17) | C10—O3—C7—C8 | 4.6 (2) |
| C4—N2—C3—O2 | 6.1 (3) | C10—O3—C7—C6 | −176.52 (15) |
| C2—N2—C3—O2 | 179.53 (17) | C5—C6—C7—O3 | −178.02 (15) |
| C4—N2—C3—N1 | −175.22 (14) | C5—C6—C7—C8 | 0.9 (3) |
| C2—N2—C3—N1 | −1.77 (19) | O3—C7—C8—C9 | 177.92 (14) |
| C1—N1—C3—O2 | −179.49 (15) | C6—C7—C8—C9 | −0.9 (2) |
| C1—N1—C3—N2 | 1.71 (19) | C5—C4—C9—C8 | 1.4 (3) |
| C3—N2—C4—C9 | 179.43 (16) | N2—C4—C9—C8 | −178.85 (14) |
| C2—N2—C4—C9 | 6.6 (2) | C7—C8—C9—C4 | −0.3 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O1i | 0.91 (1) | 1.95 (1) | 2.8512 (19) | 172 (2) |
| C2—H2A···O2ii | 0.99 | 2.34 | 3.291 (2) | 160 |
| C8—H8···O2iii | 0.95 | 2.42 | 3.203 (2) | 140 |
| Cg1—···.Cg1iv | . | . | 3.705 (3) | . |
| Cg1—···.Cg2v | . | . | 3.622 (3) | . |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y+1, z; (iii) x+1, y+1, z; (iv) −x+1, −y, −z; (v) x+1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: TK2669).
References
- Gerdil, R. (1960). Acta Cryst.13, 165–166.
- Kurzer, F., Arnold, R. T. & Krogh, L. C. (1963). Org. Synth.4, 49.
- Niwata, S., Fukami, H., Sumida, M., Ito, A., Kakutani, S., Saitoh, M., Suzuki, K., Imoto, M., Shibata, H., Imajo, S., Kiso, Y., Tanaka, T., Nakazato, H., Ishihara, T., Takai, S., Yamamoto, D., Shiota, N., Miyazaki, M., Okunishi, H., Kinoshita, A., Urata, H. & Arakawa, K. (1997). J. Med. Chem 40, 2156–2163. [DOI] [PubMed]
- Rigaku/MSC (2005). CrystalClear Rigaku/MSC Inc., The Woodlands, Texas, USA.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810016478/tk2669sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016478/tk2669Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

