Abstract
The title molecule, C5H7N3O2, has an almost planar conformation, with a maximum deviation of 0.043 (3) Å, except for the methyl H atoms. In the crystal structure, intermolecular C—H⋯O hydrogen bonds link the molecules into layers parallel to the bc plane. Intermolecular π–π stacking interactions [centroid–centroid distances = 3.685 (2) and 3.697 (2) Å] are observed between the parallel triazole rings.
Related literature
For related structures, see: Prabakaran et al. (2009a
▶,b
▶); Beitelman et al. (2007 ▶); Jabli et al. (2010 ▶). For the properties and applications of related compounds, see: Dehne (1994 ▶); Fan & Katritzky (1996 ▶); Genin et al. (2000 ▶); Velazquez et al. (1998 ▶).
Experimental
Crystal data
C5H7N3O2
M r = 141.14
Triclinic,
a = 5.697 (1) Å
b = 7.1314 (11) Å
c = 8.6825 (16) Å
α = 71.053 (16)°
β = 86.865 (15)°
γ = 76.528 (14)°
V = 324.37 (10) Å3
Z = 2
Mo Kα radiation
μ = 0.11 mm−1
T = 293 K
0.15 × 0.10 × 0.05 mm
Data collection
Oxford Diffraction Xcalibur Eos (Nova) CCD detector diffractometer
6915 measured reflections
1108 independent reflections
800 reflections with I > 2σ(I)
R int = 0.049
Refinement
R[F 2 > 2σ(F 2)] = 0.064
wR(F 2) = 0.173
S = 1.13
1108 reflections
93 parameters
H-atom parameters constrained
Δρmax = 0.26 e Å−3
Δρmin = −0.23 e Å−3
Data collection: CrysAlis PRO CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO CCD; data reduction: CrysAlis PRO RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810019173/xu2764sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019173/xu2764Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
C1—H1A⋯O1i | 0.96 | 2.59 | 3.509 (5) | 160 |
C5—H5B⋯O1ii | 0.96 | 2.39 | 3.277 (5) | 153 |
Symmetry codes: (i) ; (ii)
.
Acknowledgments
We thank the Department of Science and Technology, India, for use of the CCD facility set up under the IRHPA–DST program at IISc. We thank Professor T. N. Guru Row, IISc, Bangalore, for the data collection. F·NK thanks the DST for Fast Track Proposal funding.
supplementary crystallographic information
Comment
1,2,3-Triazoles are useful synthetic targets in organic synthesis and are associated with biological properties such as antiviral, antibacterial, antiepileptic and antiallergic (Velazquez et al., 1998; Genin et al., 2000). They have also found applications as agrochemicals, dyes, hotographic materials, and in corrosion inhibition (Fan & Katritzky, 1996; Dehne, 1994). In continuous of our earlier reports (Prabakaran et al., 2009a,b), here the crystal structure of the title compound is presented.
As shown in Fig. 1, the conformation of the title molecule is almost planar, with a maximum deviation of -0.043 (3) Å for O1, except the H atoms of two methyl groups.
In the crystal structure, molecules connect to each other, via the intermolecular C—H···O hydrogen bonds (Table 1, Fig. 2), into two-dimensional layers parallel to the bc plane, and intermolecular π–π stacking interactions [Cg1···Cg1(1 - x, -y, 2 - z) = 3.685 (2) Å and Cg1···Cg1(1 - x, 1 - y, 2 - z) = 3.697 (2) Å, where Cg1 is a centroid of the triazole ring] between the parallel triazole rings contribute to the stabilization of the structure.
Experimental
To methyl 1H-1,2,3-triazole-4-carboxylate (2 g) in dry DMF (15 ml) maintained at 273 K in nitrogen atmosphere, was added K2CO3 (1.3 g), methyliodide (0.98 ml), the mixture was then stirred at 273 K for 1 h, allowed to warm to room temperature and stirred till completion of reaction, monitored by TLC. The reaction mixture on LCMS analysis showed three isomers well separated with their significant retention time and high purity. Three fractions were identified by mass spectroscopy. The solvent was evaporated under vacuo and the residue was isolated into individual isomers by column chromatography. The single crystals of the title compound for X-ray structure analysis were obtained from ether solution by slow evaporation.
Refinement
H atoms were positioned geometrically with C—H = 0.93-0.96 Å, and were refined in riding mode with Uiso(H) = 1.2 or 1.5Ueq(C). In the final refinement cycles, the inconsistent 33 reflections were omitted.
Figures
Fig. 1.
The title molecule showing the atom-numbering scheme. The displacement ellipsoids are drawn at the 50% probability level.
Fig. 2.
View of the crystal packing of (I), viewed down the a axis. The H atoms not involved in the hydrogen bonding pattern have been omitted for clarity.
Crystal data
C5H7N3O2 | Z = 2 |
Mr = 141.14 | F(000) = 148 |
Triclinic, P1 | Dx = 1.445 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.697 (1) Å | Cell parameters from 1326 reflections |
b = 7.1314 (11) Å | θ = 2.0–20.7° |
c = 8.6825 (16) Å | µ = 0.11 mm−1 |
α = 71.053 (16)° | T = 293 K |
β = 86.865 (15)° | Block, colourless |
γ = 76.528 (14)° | 0.15 × 0.10 × 0.05 mm |
V = 324.37 (10) Å3 |
Data collection
Oxford Xcalibur Eos (Nova) CCD detector diffractometer | 800 reflections with I > 2σ(I) |
Radiation source: Enhance (Mo) X-ray Source | Rint = 0.049 |
graphite | θmax = 25.0°, θmin = 3.1° |
ω scans | h = −6→6 |
6915 measured reflections | k = −8→8 |
1108 independent reflections | l = −10→10 |
Refinement
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.064 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.173 | H-atom parameters constrained |
S = 1.13 | w = 1/[σ2(Fo2) + (0.0741P)2 + 0.2349P] where P = (Fo2 + 2Fc2)/3 |
1108 reflections | (Δ/σ)max < 0.001 |
93 parameters | Δρmax = 0.26 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
Special details
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
O1 | 0.6694 (5) | 0.2352 (5) | 0.5832 (3) | 0.0591 (13) | |
O2 | 0.2797 (4) | 0.2639 (4) | 0.6475 (3) | 0.0440 (9) | |
N1 | 0.7108 (5) | 0.2390 (4) | 1.0644 (3) | 0.0361 (10) | |
N2 | 0.4740 (5) | 0.2478 (5) | 1.0897 (4) | 0.0430 (11) | |
N3 | 0.3757 (5) | 0.2534 (5) | 0.9553 (4) | 0.0417 (10) | |
C1 | 0.8687 (7) | 0.2325 (6) | 1.1941 (5) | 0.0471 (14) | |
C2 | 0.7651 (6) | 0.2415 (5) | 0.9131 (4) | 0.0369 (11) | |
C3 | 0.5521 (6) | 0.2492 (5) | 0.8434 (4) | 0.0342 (11) | |
C4 | 0.5106 (6) | 0.2486 (5) | 0.6793 (4) | 0.0373 (12) | |
C5 | 0.2257 (7) | 0.2676 (7) | 0.4852 (5) | 0.0532 (14) | |
H1A | 0.77460 | 0.24230 | 1.28750 | 0.0700* | |
H1B | 0.94680 | 0.34440 | 1.15670 | 0.0700* | |
H1C | 0.98850 | 0.10660 | 1.22340 | 0.0700* | |
H2 | 0.91520 | 0.23860 | 0.86500 | 0.0440* | |
H5A | 0.26750 | 0.38410 | 0.40620 | 0.0790* | |
H5B | 0.05650 | 0.27540 | 0.47490 | 0.0790* | |
H5C | 0.31730 | 0.14580 | 0.46690 | 0.0790* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0354 (15) | 0.103 (3) | 0.0513 (18) | −0.0203 (15) | 0.0119 (13) | −0.0399 (17) |
O2 | 0.0336 (14) | 0.0667 (18) | 0.0370 (15) | −0.0139 (12) | −0.0013 (11) | −0.0216 (13) |
N1 | 0.0315 (16) | 0.0468 (19) | 0.0314 (17) | −0.0104 (13) | 0.0007 (13) | −0.0133 (13) |
N2 | 0.0346 (17) | 0.057 (2) | 0.0386 (18) | −0.0098 (14) | 0.0038 (14) | −0.0178 (15) |
N3 | 0.0348 (16) | 0.055 (2) | 0.0354 (18) | −0.0108 (14) | 0.0002 (14) | −0.0140 (14) |
C1 | 0.045 (2) | 0.062 (3) | 0.036 (2) | −0.0133 (19) | −0.0046 (17) | −0.0165 (19) |
C2 | 0.0306 (18) | 0.047 (2) | 0.036 (2) | −0.0126 (16) | 0.0054 (15) | −0.0155 (17) |
C3 | 0.0286 (18) | 0.038 (2) | 0.039 (2) | −0.0116 (15) | 0.0068 (15) | −0.0144 (16) |
C4 | 0.038 (2) | 0.039 (2) | 0.038 (2) | −0.0120 (16) | −0.0022 (18) | −0.0137 (17) |
C5 | 0.046 (2) | 0.082 (3) | 0.040 (2) | −0.025 (2) | −0.0030 (18) | −0.023 (2) |
Geometric parameters (Å, °)
O1—C4 | 1.205 (4) | C3—C4 | 1.459 (5) |
O2—C4 | 1.331 (4) | C1—H1A | 0.9600 |
O2—C5 | 1.449 (5) | C1—H1B | 0.9600 |
N1—N2 | 1.345 (4) | C1—H1C | 0.9600 |
N1—C1 | 1.462 (5) | C2—H2 | 0.9300 |
N1—C2 | 1.328 (4) | C5—H5A | 0.9600 |
N2—N3 | 1.307 (5) | C5—H5B | 0.9600 |
N3—C3 | 1.361 (5) | C5—H5C | 0.9600 |
C2—C3 | 1.367 (5) | ||
O1···C5i | 3.277 (5) | C4···N2vii | 3.439 (5) |
O2···N3 | 2.731 (4) | C5···C1x | 3.435 (6) |
O1···H1Aii | 2.5900 | C5···O1vi | 3.277 (5) |
O1···H5A | 2.6300 | C1···H5Bix | 2.8500 |
O1···H5Bi | 2.3900 | C4···H5Aiv | 3.0300 |
O1···H5C | 2.5900 | H1A···O1xi | 2.5900 |
O1···H1Ciii | 2.8400 | H1A···H5Bix | 2.4500 |
O1···H5Aiv | 2.8500 | H1B···N3viii | 2.9100 |
O1···H5Cv | 2.8700 | H1C···O1iii | 2.8400 |
O1···H2 | 2.8900 | H2···O1 | 2.8900 |
O2···H2vi | 2.7300 | H2···O2i | 2.7300 |
N2···C3vii | 3.438 (5) | H2···N3i | 2.8100 |
N2···C4vii | 3.439 (5) | H5A···O1 | 2.6300 |
N3···O2 | 2.731 (4) | H5A···O1iv | 2.8500 |
N3···C1viii | 3.434 (6) | H5A···C4iv | 3.0300 |
N3···C3vii | 3.376 (5) | H5B···O1vi | 2.3900 |
N3···H2vi | 2.8100 | H5B···C1x | 2.8500 |
N3···H1Bviii | 2.9100 | H5B···H1Ax | 2.4500 |
C1···C5ix | 3.435 (6) | H5C···O1 | 2.5900 |
C1···N3viii | 3.434 (6) | H5C···O1v | 2.8700 |
C3···N3vii | 3.376 (5) | H5C···H5Cv | 2.5200 |
C3···N2vii | 3.438 (5) | ||
C4—O2—C5 | 115.6 (3) | N1—C1—H1B | 109.00 |
N2—N1—C1 | 120.4 (3) | N1—C1—H1C | 110.00 |
N2—N1—C2 | 110.7 (3) | H1A—C1—H1B | 109.00 |
C1—N1—C2 | 129.0 (3) | H1A—C1—H1C | 109.00 |
N1—N2—N3 | 107.9 (3) | H1B—C1—H1C | 109.00 |
N2—N3—C3 | 107.9 (3) | N1—C2—H2 | 128.00 |
N1—C2—C3 | 105.0 (3) | C3—C2—H2 | 127.00 |
N3—C3—C2 | 108.6 (3) | O2—C5—H5A | 109.00 |
N3—C3—C4 | 123.5 (3) | O2—C5—H5B | 109.00 |
C2—C3—C4 | 127.9 (3) | O2—C5—H5C | 110.00 |
O1—C4—O2 | 123.8 (3) | H5A—C5—H5B | 109.00 |
O1—C4—C3 | 123.3 (3) | H5A—C5—H5C | 109.00 |
O2—C4—C3 | 112.9 (3) | H5B—C5—H5C | 109.00 |
N1—C1—H1A | 109.00 | ||
C5—O2—C4—O1 | −1.1 (6) | N2—N3—C3—C4 | 178.5 (3) |
C5—O2—C4—C3 | 179.0 (3) | N1—C2—C3—N3 | 0.7 (4) |
C1—N1—N2—N3 | 179.6 (3) | N1—C2—C3—C4 | −178.0 (3) |
C2—N1—N2—N3 | 0.8 (4) | N3—C3—C4—O1 | −176.4 (4) |
N2—N1—C2—C3 | −0.9 (4) | N3—C3—C4—O2 | 3.5 (5) |
C1—N1—C2—C3 | −179.6 (4) | C2—C3—C4—O1 | 2.1 (6) |
N1—N2—N3—C3 | −0.3 (4) | C2—C3—C4—O2 | −178.0 (4) |
N2—N3—C3—C2 | −0.2 (4) |
Symmetry codes: (i) x+1, y, z; (ii) x, y, z−1; (iii) −x+2, −y, −z+2; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y, −z+1; (vi) x−1, y, z; (vii) −x+1, −y, −z+2; (viii) −x+1, −y+1, −z+2; (ix) x+1, y, z+1; (x) x−1, y, z−1; (xi) x, y, z+1.
Hydrogen-bond geometry (Å, °)
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1A···O1xi | 0.96 | 2.59 | 3.509 (5) | 160 |
C5—H5B···O1vi | 0.96 | 2.39 | 3.277 (5) | 153 |
Symmetry codes: (xi) x, y, z+1; (vi) x−1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: XU2764).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810019173/xu2764sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019173/xu2764Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report