Abstract
In the title compound, C16H12BrFO2S, the O atom and the methyl group of the methylsulfinyl substituent are located on opposite sides of the plane through the benzofuran fragment. The 4-fluorophenyl ring is rotated out of the benzofuran plane, as indicated by the dihedral angle of 16.17 (5)°. The crystal structure exhibits an intermolecular C—H⋯O hydrogen bond and a Br⋯O halogen interaction [3.112 (2) Å].
Related literature
For the crystal structures of similar 2-(4-fluorophenyl)-5-halo-3-methylsulfinyl-1-benzofuran derivatives, see: Choi et al. (2009a
▶,b
▶, 2010 ▶). For the pharmacological activity of benzofuran compounds, see: Howlett et al. (1999 ▶); Twyman & Allsop (1999 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For a review of halogen interactions, see: Politzer et al. (2007 ▶).
Experimental
Crystal data
C16H12BrFO2S
M r = 367.23
Triclinic,
a = 7.5313 (6) Å
b = 9.8089 (7) Å
c = 10.9117 (8) Å
α = 106.567 (1)°
β = 92.634 (1)°
γ = 109.526 (1)°
V = 719.23 (9) Å3
Z = 2
Mo Kα radiation
μ = 3.01 mm−1
T = 173 K
0.60 × 0.40 × 0.20 mm
Data collection
Bruker SMART APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.586, T max = 0.746
6248 measured reflections
3083 independent reflections
2802 reflections with I > 2σ(I)
R int = 0.016
Refinement
R[F 2 > 2σ(F 2)] = 0.023
wR(F 2) = 0.060
S = 1.05
3083 reflections
192 parameters
H-atom parameters constrained
Δρmax = 0.34 e Å−3
Δρmin = −0.39 e Å−3
Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680905418X/kp2245sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680905418X/kp2245Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C15—H15C⋯O2i | 0.96 | 2.58 | 3.294 (2) | 131 |
Symmetry code: (i)
.
supplementary crystallographic information
Comment
Molecules of benzofuran ring skeleton have attracted considerable interest, on account of their pharmacological activity (Howlett et al., 1999; Twyman & Allsop, 1999) and their occurrence as natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our continuing studies on the effect of side chain substituents on the solid state structures of 2-(4-fluorophenyl)-5-halo-3-methylsulfinyl-1-benzofuran analogues (Choi et al., 2009a, b, 2010), we report the crystal structure of the title compound (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.014 (1) Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle formed by the plane of the benzofuran and the 4-fluorophenyl ring is 16.17 (5)°. The crystal packing (Fig. 2) is stabilized by an intermolecular C—H···O hydrogen bond between the methyl H atom and the oxygen of the S═O unit, with a C15—H15C···O2i (Table 1and Fig. 2). The contact C-Br···O involving the the oxygen atom of the S═O unit [Br···O2ii = 3.112 (1) Å; C—Br···O2ii = 173.44 (7)°] is significantly shorter than the sum of van der Waals radia (3.40 Å) (Politzer et al., 2007).
Experimental
77% 3-Chloroperoxybenzoic acid (247 mg, 1.1 mmol) was added in small portions to a stirred solution of 5-bromo-2-(4-fluorophenyl)-7-methyl-3-methylsulfanyl-1-benzofuran (351 mg, 1.0 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 3 h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by column chromatography (hexane–ethyl acetate, 1:1 v/v) to afford the title compound as a colourless solid [yield 85%, m.p. 477–478 K; Rf = 0.71 (hexane–ethyl acetate, 1:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of a solution of the title compound in tetrahydrofuran at room temperature.
Refinement
All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93 Å for aromatic H atoms and 0.96 Å for methyl H atoms, and with Uiso(H) = 1.2Ueq(C) for aromatic H atoms and 1.5Ueq(C) for methyl H atoms.
Figures
Fig. 1.
The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as a small spheres of arbitrary radius.
Fig. 2.
C—H···O and C—Br···O interactions (dotted lines) in the crystal structure of the title compound. [Symmetry codes: (i) x, y + 1, z; (ii) - x + 1, - y + 1, - z + 2; (iii) x, y - 1, z .]
Crystal data
| C16H12BrFO2S | Z = 2 |
| Mr = 367.23 | F(000) = 368 |
| Triclinic, P1 | Dx = 1.696 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.5313 (6) Å | Cell parameters from 4231 reflections |
| b = 9.8089 (7) Å | θ = 2.3–27.4° |
| c = 10.9117 (8) Å | µ = 3.01 mm−1 |
| α = 106.567 (1)° | T = 173 K |
| β = 92.634 (1)° | Block, colourless |
| γ = 109.526 (1)° | 0.60 × 0.40 × 0.20 mm |
| V = 719.23 (9) Å3 |
Data collection
| Bruker SMART APEXII CCD diffractometer | 3083 independent reflections |
| Radiation source: Rotating Anode | 2802 reflections with I > 2σ(I) |
| HELIOS | Rint = 0.016 |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.0°, θmin = 2.0° |
| φ and ω scans | h = −9→9 |
| Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −12→12 |
| Tmin = 0.586, Tmax = 0.746 | l = −13→13 |
| 6248 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.023 | Hydrogen site location: difference Fourier map |
| wR(F2) = 0.060 | H-atom parameters constrained |
| S = 1.05 | w = 1/[σ2(Fo2) + (0.0302P)2 + 0.3573P] where P = (Fo2 + 2Fc2)/3 |
| 3083 reflections | (Δ/σ)max < 0.001 |
| 192 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Br | 0.56892 (3) | 0.75819 (2) | 1.066631 (17) | 0.02668 (7) | |
| S | 0.18420 (7) | 0.22498 (5) | 0.55788 (4) | 0.02381 (11) | |
| O1 | 0.31077 (18) | 0.62985 (14) | 0.50645 (12) | 0.0214 (3) | |
| O2 | 0.3359 (2) | 0.21723 (16) | 0.64548 (14) | 0.0320 (3) | |
| F | −0.0757 (2) | 0.21942 (17) | −0.05951 (11) | 0.0476 (4) | |
| C1 | 0.2455 (3) | 0.4180 (2) | 0.56565 (17) | 0.0207 (4) | |
| C2 | 0.3406 (3) | 0.5483 (2) | 0.67945 (17) | 0.0197 (3) | |
| C3 | 0.3970 (3) | 0.5713 (2) | 0.81000 (17) | 0.0217 (4) | |
| H3 | 0.3726 | 0.4901 | 0.8427 | 0.026* | |
| C4 | 0.4906 (3) | 0.7202 (2) | 0.88760 (17) | 0.0216 (4) | |
| C5 | 0.5318 (3) | 0.8455 (2) | 0.84171 (18) | 0.0217 (4) | |
| H5 | 0.5973 | 0.9434 | 0.8985 | 0.026* | |
| C6 | 0.4760 (3) | 0.8255 (2) | 0.71248 (18) | 0.0207 (4) | |
| C7 | 0.3798 (2) | 0.6748 (2) | 0.63653 (17) | 0.0193 (3) | |
| C8 | 0.2316 (2) | 0.4724 (2) | 0.46474 (18) | 0.0203 (4) | |
| C9 | 0.1517 (3) | 0.4038 (2) | 0.32705 (17) | 0.0215 (4) | |
| C10 | 0.0209 (3) | 0.2541 (2) | 0.27673 (19) | 0.0283 (4) | |
| H10 | −0.0167 | 0.1961 | 0.3316 | 0.034* | |
| C11 | −0.0534 (3) | 0.1909 (3) | 0.1460 (2) | 0.0332 (5) | |
| H11 | −0.1376 | 0.0903 | 0.1121 | 0.040* | |
| C12 | 0.0004 (3) | 0.2802 (3) | 0.06824 (19) | 0.0318 (5) | |
| C13 | 0.1276 (3) | 0.4285 (3) | 0.11316 (19) | 0.0298 (4) | |
| H13 | 0.1607 | 0.4860 | 0.0575 | 0.036* | |
| C14 | 0.2051 (3) | 0.4901 (2) | 0.24326 (19) | 0.0252 (4) | |
| H14 | 0.2933 | 0.5895 | 0.2752 | 0.030* | |
| C15 | 0.5111 (3) | 0.9548 (2) | 0.65832 (19) | 0.0268 (4) | |
| H15A | 0.5531 | 0.9286 | 0.5760 | 0.040* | |
| H15B | 0.6076 | 1.0448 | 0.7168 | 0.040* | |
| H15C | 0.3952 | 0.9737 | 0.6475 | 0.040* | |
| C16 | −0.0164 (3) | 0.2099 (3) | 0.6426 (2) | 0.0351 (5) | |
| H16A | −0.0639 | 0.1111 | 0.6538 | 0.053* | |
| H16B | −0.1150 | 0.2230 | 0.5936 | 0.053* | |
| H16C | 0.0222 | 0.2874 | 0.7258 | 0.053* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Br | 0.03804 (12) | 0.02214 (11) | 0.01767 (10) | 0.01046 (8) | −0.00056 (7) | 0.00439 (7) |
| S | 0.0331 (3) | 0.0152 (2) | 0.0220 (2) | 0.00897 (19) | 0.00200 (19) | 0.00445 (17) |
| O1 | 0.0269 (7) | 0.0172 (6) | 0.0193 (6) | 0.0071 (5) | 0.0009 (5) | 0.0062 (5) |
| O2 | 0.0397 (8) | 0.0274 (8) | 0.0342 (8) | 0.0167 (7) | 0.0012 (6) | 0.0128 (6) |
| F | 0.0504 (8) | 0.0559 (9) | 0.0194 (6) | 0.0055 (7) | −0.0086 (6) | 0.0053 (6) |
| C1 | 0.0239 (9) | 0.0164 (8) | 0.0205 (9) | 0.0066 (7) | 0.0025 (7) | 0.0052 (7) |
| C2 | 0.0223 (8) | 0.0170 (8) | 0.0208 (9) | 0.0087 (7) | 0.0039 (7) | 0.0055 (7) |
| C3 | 0.0282 (9) | 0.0175 (9) | 0.0211 (9) | 0.0095 (7) | 0.0039 (7) | 0.0075 (7) |
| C4 | 0.0260 (9) | 0.0226 (9) | 0.0174 (8) | 0.0112 (7) | 0.0019 (7) | 0.0058 (7) |
| C5 | 0.0232 (9) | 0.0159 (9) | 0.0232 (9) | 0.0071 (7) | 0.0020 (7) | 0.0026 (7) |
| C6 | 0.0222 (9) | 0.0170 (9) | 0.0239 (9) | 0.0083 (7) | 0.0051 (7) | 0.0065 (7) |
| C7 | 0.0211 (8) | 0.0186 (9) | 0.0186 (8) | 0.0076 (7) | 0.0015 (7) | 0.0062 (7) |
| C8 | 0.0200 (8) | 0.0173 (9) | 0.0221 (9) | 0.0063 (7) | 0.0034 (7) | 0.0046 (7) |
| C9 | 0.0203 (8) | 0.0242 (9) | 0.0202 (9) | 0.0095 (7) | 0.0020 (7) | 0.0059 (7) |
| C10 | 0.0276 (10) | 0.0276 (10) | 0.0253 (10) | 0.0051 (8) | 0.0010 (8) | 0.0083 (8) |
| C11 | 0.0282 (10) | 0.0311 (11) | 0.0287 (11) | 0.0026 (9) | −0.0032 (8) | 0.0033 (9) |
| C12 | 0.0290 (10) | 0.0415 (12) | 0.0187 (9) | 0.0108 (9) | −0.0018 (8) | 0.0037 (9) |
| C13 | 0.0310 (10) | 0.0368 (12) | 0.0233 (10) | 0.0117 (9) | 0.0031 (8) | 0.0130 (9) |
| C14 | 0.0259 (9) | 0.0247 (10) | 0.0242 (9) | 0.0093 (8) | 0.0022 (8) | 0.0070 (8) |
| C15 | 0.0364 (11) | 0.0192 (9) | 0.0261 (10) | 0.0102 (8) | 0.0063 (8) | 0.0087 (8) |
| C16 | 0.0333 (11) | 0.0280 (11) | 0.0443 (13) | 0.0068 (9) | 0.0101 (10) | 0.0164 (10) |
Geometric parameters (Å, °)
| Br—C4 | 1.907 (2) | C6—C15 | 1.497 (3) |
| Br—O2i | 3.112 (2) | C8—C9 | 1.463 (2) |
| S—O2 | 1.491 (2) | C9—C10 | 1.397 (3) |
| S—C1 | 1.768 (2) | C9—C14 | 1.401 (3) |
| S—C16 | 1.794 (2) | C10—C11 | 1.386 (3) |
| O1—C7 | 1.379 (2) | C10—H10 | 0.9300 |
| O1—C8 | 1.381 (2) | C11—C12 | 1.368 (3) |
| F—C12 | 1.360 (2) | C11—H11 | 0.9300 |
| C1—C8 | 1.368 (3) | C12—C13 | 1.375 (3) |
| C1—C2 | 1.445 (2) | C13—C14 | 1.386 (3) |
| C2—C7 | 1.394 (2) | C13—H13 | 0.9300 |
| C2—C3 | 1.399 (2) | C14—H14 | 0.9300 |
| C3—C4 | 1.378 (3) | C15—H15A | 0.9600 |
| C3—H3 | 0.9300 | C15—H15B | 0.9600 |
| C4—C5 | 1.403 (3) | C15—H15C | 0.9600 |
| C5—C6 | 1.391 (3) | C16—H16A | 0.9600 |
| C5—H5 | 0.9300 | C16—H16B | 0.9600 |
| C6—C7 | 1.389 (2) | C16—H16C | 0.9600 |
| C4—Br—O2i | 173.44 (7) | C10—C9—C8 | 121.62 (17) |
| O2—S—C1 | 107.33 (9) | C14—C9—C8 | 119.58 (17) |
| O2—S—C16 | 105.95 (10) | C11—C10—C9 | 120.85 (19) |
| C1—S—C16 | 97.80 (9) | C11—C10—H10 | 119.6 |
| C7—O1—C8 | 106.74 (13) | C9—C10—H10 | 119.6 |
| C8—C1—C2 | 107.32 (16) | C12—C11—C10 | 118.3 (2) |
| C8—C1—S | 127.08 (14) | C12—C11—H11 | 120.8 |
| C2—C1—S | 125.27 (14) | C10—C11—H11 | 120.8 |
| C7—C2—C3 | 118.96 (16) | F—C12—C11 | 118.39 (19) |
| C7—C2—C1 | 105.04 (15) | F—C12—C13 | 118.55 (19) |
| C3—C2—C1 | 136.00 (17) | C11—C12—C13 | 123.06 (19) |
| C4—C3—C2 | 116.62 (16) | C12—C13—C14 | 118.48 (19) |
| C4—C3—H3 | 121.7 | C12—C13—H13 | 120.8 |
| C2—C3—H3 | 121.7 | C14—C13—H13 | 120.8 |
| C3—C4—C5 | 123.42 (17) | C13—C14—C9 | 120.46 (18) |
| C3—C4—Br | 118.40 (14) | C13—C14—H14 | 119.8 |
| C5—C4—Br | 118.17 (14) | C9—C14—H14 | 119.8 |
| C6—C5—C4 | 120.97 (17) | C6—C15—H15A | 109.5 |
| C6—C5—H5 | 119.5 | C6—C15—H15B | 109.5 |
| C4—C5—H5 | 119.5 | H15A—C15—H15B | 109.5 |
| C7—C6—C5 | 114.57 (16) | C6—C15—H15C | 109.5 |
| C7—C6—C15 | 121.86 (17) | H15A—C15—H15C | 109.5 |
| C5—C6—C15 | 123.54 (17) | H15B—C15—H15C | 109.5 |
| O1—C7—C6 | 124.01 (16) | S—C16—H16A | 109.5 |
| O1—C7—C2 | 110.54 (15) | S—C16—H16B | 109.5 |
| C6—C7—C2 | 125.44 (17) | H16A—C16—H16B | 109.5 |
| C1—C8—O1 | 110.33 (16) | S—C16—H16C | 109.5 |
| C1—C8—C9 | 135.27 (17) | H16A—C16—H16C | 109.5 |
| O1—C8—C9 | 114.40 (15) | H16B—C16—H16C | 109.5 |
| C10—C9—C14 | 118.79 (17) | ||
| O2—S—C1—C8 | 138.31 (17) | C1—C2—C7—O1 | 1.57 (19) |
| C16—S—C1—C8 | −112.23 (18) | C3—C2—C7—C6 | 1.6 (3) |
| O2—S—C1—C2 | −34.18 (18) | C1—C2—C7—C6 | −177.92 (17) |
| C16—S—C1—C2 | 75.29 (18) | C2—C1—C8—O1 | −0.4 (2) |
| C8—C1—C2—C7 | −0.7 (2) | S—C1—C8—O1 | −173.93 (13) |
| S—C1—C2—C7 | 172.99 (14) | C2—C1—C8—C9 | −179.25 (19) |
| C8—C1—C2—C3 | 179.9 (2) | S—C1—C8—C9 | 7.2 (3) |
| S—C1—C2—C3 | −6.4 (3) | C7—O1—C8—C1 | 1.32 (19) |
| C7—C2—C3—C4 | −0.6 (3) | C7—O1—C8—C9 | −179.53 (14) |
| C1—C2—C3—C4 | 178.7 (2) | C1—C8—C9—C10 | 17.4 (3) |
| C2—C3—C4—C5 | −0.7 (3) | O1—C8—C9—C10 | −161.47 (17) |
| C2—C3—C4—Br | 179.49 (13) | C1—C8—C9—C14 | −163.3 (2) |
| C3—C4—C5—C6 | 1.1 (3) | O1—C8—C9—C14 | 17.8 (2) |
| Br—C4—C5—C6 | −179.08 (14) | C14—C9—C10—C11 | 0.7 (3) |
| C4—C5—C6—C7 | −0.2 (3) | C8—C9—C10—C11 | 180.00 (18) |
| C4—C5—C6—C15 | 178.35 (17) | C9—C10—C11—C12 | −1.8 (3) |
| C8—O1—C7—C6 | 177.69 (17) | C10—C11—C12—F | −178.57 (19) |
| C8—O1—C7—C2 | −1.81 (19) | C10—C11—C12—C13 | 1.4 (3) |
| C5—C6—C7—O1 | 179.43 (16) | F—C12—C13—C14 | −179.89 (18) |
| C15—C6—C7—O1 | 0.9 (3) | C11—C12—C13—C14 | 0.1 (3) |
| C5—C6—C7—C2 | −1.1 (3) | C12—C13—C14—C9 | −1.3 (3) |
| C15—C6—C7—C2 | −179.68 (17) | C10—C9—C14—C13 | 0.8 (3) |
| C3—C2—C7—O1 | −178.94 (15) | C8—C9—C14—C13 | −178.44 (17) |
Symmetry codes: (i) −x+1, −y+1, −z+2.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C15—H15C···O2ii | 0.96 | 2.58 | 3.294 (2) | 131 |
Symmetry codes: (ii) x, y+1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: KP2245).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680905418X/kp2245sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S160053680905418X/kp2245Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


