Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Dec 12;66(Pt 1):m41. doi: 10.1107/S1600536809052325

catena-Poly[[di-μ-iodido-dicopper(I)(CuCu)]bis­(μ-4,4′-di-3-pyridyl-2,2′-disulfanediyldipyrimidine)]

Hai-Bin Zhu a,*
PMCID: PMC2980262  PMID: 21579940

Abstract

The title complex, [Cu2I2(C18H12N6S2)2]n, contains a Cu2I2 core with a Cu—Cu distance of 2.6935 (14) Å. The CuI atom is coordinated by two bridging 4,4′-di-3-pyridyl-2,2′-disulfanediyldipyrimidine ligands and two bridging I atoms, forming a double chain.

Related literature

For coordination polymers with 4,4′-dipyridine­disulfide, see: Horikoshi & Mochida (2006). For coordination polymers with 2,2′-dithio­bis(4-pyridin-4-yl-pyrimidine), see: Zhu et al. (2009). For the structure of free 2,2′-dithio­bis(3-pyridin-4-yl-pyrimidine), see: Ji et al. (2009).graphic file with name e-66-00m41-scheme1.jpg

Experimental

Crystal data

  • [Cu2I2(C18H12N6S2)2]

  • M r = 1133.86

  • Triclinic, Inline graphic

  • a = 8.5561 (6) Å

  • b = 10.7702 (8) Å

  • c = 11.9045 (8) Å

  • α = 98.110 (1)°

  • β = 107.193 (1)°

  • γ = 96.449 (1)°

  • V = 1023.66 (13) Å3

  • Z = 1

  • Mo Kα radiation

  • μ = 2.80 mm−1

  • T = 298 K

  • 0.19 × 0.15 × 0.12 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001) T min = 0.611, T max = 0.715

  • 5395 measured reflections

  • 3568 independent reflections

  • 2956 reflections with I > 2σ(I)

  • R int = 0.097

Refinement

  • R[F 2 > 2σ(F 2)] = 0.041

  • wR(F 2) = 0.108

  • S = 0.99

  • 3568 reflections

  • 253 parameters

  • H-atom parameters constrained

  • Δρmax = 1.28 e Å−3

  • Δρmin = −1.03 e Å−3

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809052325/hy2260sup1.cif

e-66-00m41-sup1.cif (19.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809052325/hy2260Isup2.hkl

e-66-00m41-Isup2.hkl (175KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Selected bond lengths (Å).

Cu1—I1 2.6550 (7)
Cu1—I1i 2.6579 (8)
Cu1—N1 2.037 (4)
Cu1—N6ii 2.060 (4)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The author acknowledges finanical support from the China Postdoctoral Reseach Fund (20070411010).

supplementary crystallographic information

Comment

In recent years, heterocyclic disulfide ligands have received increasing attention because of their conformationally defined dihedral angle (Horikoshi & Mochida, 2006). As continuation of our previous research (Zhu et al., 2009), we report here a copper(I) coordination polymer with a 2,2'-dithiobis(3-pyridin-4-ylpyrimidine) (L) ligand.

The CuI atom in the title complex has a tetrahedral coordination geometry completed by two N atoms from two different L ligands and two bridging I atoms (Fig. 1 and Table 1). The C—S—S—C torsion angle of 81.2 (2)° in L is almost identical with the free molecule (Ji et al., 2009). Alternative linkings of one Cu2I2 core and two bridging L ligands generate a one-dimensional double chain (Fig. 2).

Experimental

A CH2Cl2 solution (5 ml) of ligand L (0.1 mmol) was slowly added into a CuI (0.1 mmol) solution in acetonitrile (10 ml). The mixture was kept on standing for 3 d to give single crystals suitable for X-ray diffraction analysis.

Refinement

H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C). The highest residual electron density was found 0.98 Å from I1 and the deepest hole 0.92 Å from I1.

Figures

Fig. 1.

Fig. 1.

The structure of the title compound with 30% probability displacement ellipsoids. H atoms have been omitted for clarity. [Symmetry codes: (i) -x + 1, -y + 2, -z; (ii) x, y + 1, z - 1.]

Fig. 2.

Fig. 2.

The one-dimensional double chain viewed along the a axis.

Crystal data

[Cu2I2(C18H12N6S2)2] Z = 1
Mr = 1133.86 F(000) = 552
Triclinic, P1 Dx = 1.839 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 8.5561 (6) Å Cell parameters from 3568 reflections
b = 10.7702 (8) Å θ = 2.3–25.5°
c = 11.9045 (8) Å µ = 2.80 mm1
α = 98.110 (1)° T = 298 K
β = 107.193 (1)° Block, yellow
γ = 96.449 (1)° 0.19 × 0.15 × 0.12 mm
V = 1023.66 (13) Å3

Data collection

Bruker APEXII CCD diffractometer 3568 independent reflections
Radiation source: fine-focus sealed tube 2956 reflections with I > 2σ(I)
graphite Rint = 0.097
φ and ω scans θmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −7→10
Tmin = 0.611, Tmax = 0.715 k = −12→12
5395 measured reflections l = −14→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108 H-atom parameters constrained
S = 0.99 w = 1/[σ2(Fo2) + (0.0541P)2] where P = (Fo2 + 2Fc2)/3
3568 reflections (Δ/σ)max = 0.001
253 parameters Δρmax = 1.28 e Å3
0 restraints Δρmin = −1.03 e Å3

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
I1 0.31696 (4) 0.97725 (3) 0.10525 (3) 0.04697 (15)
Cu1 0.38873 (9) 0.92391 (6) −0.09670 (6) 0.0503 (2)
S1 0.13540 (17) 0.55124 (12) 0.27577 (10) 0.0447 (3)
S2 0.02067 (16) 0.43336 (14) 0.35509 (12) 0.0498 (3)
N2 0.2094 (5) 0.5182 (3) 0.0809 (3) 0.0340 (8)
C5 0.3021 (5) 0.5258 (4) −0.0900 (4) 0.0328 (10)
N3 0.0948 (5) 0.3267 (4) 0.1271 (4) 0.0426 (10)
N1 0.3815 (5) 0.7322 (4) −0.1296 (3) 0.0387 (9)
C9 0.1455 (5) 0.4513 (4) 0.1466 (4) 0.0340 (10)
N5 0.1235 (5) 0.2820 (4) 0.4999 (3) 0.0381 (9)
C1 0.3142 (6) 0.6574 (4) −0.0705 (4) 0.0356 (10)
H1A 0.2728 0.6955 −0.0127 0.043*
C6 0.2284 (5) 0.4523 (4) −0.0183 (4) 0.0330 (10)
C10 0.1797 (6) 0.3566 (5) 0.4357 (4) 0.0392 (11)
C3 0.4346 (6) 0.5483 (5) −0.2380 (4) 0.0436 (11)
H3B 0.4772 0.5130 −0.2963 0.052*
C13 0.2302 (6) 0.2187 (4) 0.5638 (4) 0.0381 (10)
C12 0.3936 (6) 0.2331 (5) 0.5625 (4) 0.0480 (13)
H12A 0.4704 0.1894 0.6067 0.058*
C4 0.3639 (6) 0.4719 (5) −0.1776 (4) 0.0411 (11)
H4A 0.3572 0.3842 −0.1951 0.049*
N4 0.3312 (5) 0.3777 (4) 0.4277 (3) 0.0453 (10)
C11 0.4371 (6) 0.3147 (5) 0.4933 (5) 0.0515 (13)
H11A 0.5461 0.3261 0.4925 0.062*
C2 0.4419 (6) 0.6772 (5) −0.2117 (4) 0.0418 (11)
H2B 0.4909 0.7284 −0.2528 0.050*
C8 0.1115 (6) 0.2636 (5) 0.0281 (5) 0.0457 (12)
H8A 0.0766 0.1761 0.0087 0.055*
C7 0.1775 (6) 0.3213 (4) −0.0466 (4) 0.0416 (11)
H7A 0.1883 0.2739 −0.1148 0.050*
C14 0.1671 (6) 0.1341 (4) 0.6336 (4) 0.0380 (10)
C15 −0.0011 (6) 0.1112 (5) 0.6209 (4) 0.0475 (12)
H15A −0.0761 0.1500 0.5691 0.057*
C16 −0.0545 (7) 0.0301 (5) 0.6864 (5) 0.0532 (14)
H16A −0.1663 0.0141 0.6796 0.064*
C18 0.2701 (7) 0.0733 (5) 0.7125 (4) 0.0456 (12)
H18A 0.3827 0.0880 0.7217 0.055*
C17 0.0554 (7) −0.0264 (5) 0.7604 (4) 0.0503 (13)
H17A 0.0161 −0.0825 0.8023 0.060*
N6 0.2191 (5) −0.0053 (4) 0.7765 (3) 0.0442 (10)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
I1 0.0504 (2) 0.0489 (2) 0.0526 (2) 0.00536 (15) 0.02987 (17) 0.01773 (16)
Cu1 0.0647 (4) 0.0437 (4) 0.0576 (4) 0.0113 (3) 0.0319 (3) 0.0285 (3)
S1 0.0595 (8) 0.0464 (7) 0.0346 (6) 0.0117 (6) 0.0179 (6) 0.0187 (5)
S2 0.0478 (7) 0.0725 (9) 0.0424 (7) 0.0181 (7) 0.0204 (6) 0.0338 (7)
N2 0.039 (2) 0.034 (2) 0.0308 (19) 0.0039 (16) 0.0112 (16) 0.0143 (16)
C5 0.031 (2) 0.036 (2) 0.031 (2) 0.0029 (19) 0.0078 (18) 0.0140 (19)
N3 0.045 (2) 0.040 (2) 0.049 (2) 0.0049 (18) 0.0167 (19) 0.0225 (19)
N1 0.044 (2) 0.038 (2) 0.038 (2) 0.0031 (17) 0.0182 (18) 0.0159 (17)
C9 0.035 (2) 0.040 (3) 0.028 (2) 0.008 (2) 0.0081 (19) 0.0147 (19)
N5 0.042 (2) 0.046 (2) 0.0293 (19) 0.0054 (18) 0.0114 (17) 0.0156 (17)
C1 0.042 (3) 0.035 (2) 0.036 (2) 0.007 (2) 0.018 (2) 0.012 (2)
C6 0.033 (2) 0.034 (2) 0.033 (2) 0.0050 (19) 0.0091 (19) 0.0131 (19)
C10 0.044 (3) 0.045 (3) 0.030 (2) 0.004 (2) 0.012 (2) 0.012 (2)
C3 0.046 (3) 0.053 (3) 0.036 (2) 0.008 (2) 0.018 (2) 0.008 (2)
C13 0.046 (3) 0.040 (3) 0.029 (2) 0.004 (2) 0.011 (2) 0.012 (2)
C12 0.041 (3) 0.060 (3) 0.047 (3) 0.012 (2) 0.010 (2) 0.030 (3)
C4 0.046 (3) 0.039 (3) 0.039 (3) 0.005 (2) 0.015 (2) 0.008 (2)
N4 0.043 (2) 0.057 (3) 0.039 (2) 0.006 (2) 0.0127 (18) 0.021 (2)
C11 0.038 (3) 0.069 (4) 0.051 (3) 0.001 (3) 0.013 (2) 0.027 (3)
C2 0.046 (3) 0.048 (3) 0.036 (3) 0.000 (2) 0.018 (2) 0.016 (2)
C8 0.051 (3) 0.034 (3) 0.052 (3) 0.004 (2) 0.015 (2) 0.014 (2)
C7 0.056 (3) 0.031 (2) 0.039 (3) 0.006 (2) 0.017 (2) 0.010 (2)
C14 0.046 (3) 0.037 (2) 0.033 (2) 0.005 (2) 0.016 (2) 0.010 (2)
C15 0.046 (3) 0.059 (3) 0.040 (3) 0.004 (2) 0.014 (2) 0.017 (2)
C16 0.050 (3) 0.070 (4) 0.045 (3) 0.001 (3) 0.022 (2) 0.018 (3)
C18 0.049 (3) 0.048 (3) 0.045 (3) 0.004 (2) 0.018 (2) 0.021 (2)
C17 0.064 (3) 0.048 (3) 0.047 (3) −0.002 (3) 0.029 (3) 0.018 (2)
N6 0.054 (3) 0.042 (2) 0.041 (2) 0.0064 (19) 0.0178 (19) 0.0175 (18)

Geometric parameters (Å, °)

Cu1—I1 2.6550 (7) C3—H3B 0.9300
Cu1—I1i 2.6579 (8) C13—C12 1.394 (7)
Cu1—N1 2.037 (4) C13—C14 1.477 (6)
Cu1—N6ii 2.060 (4) C12—C11 1.379 (7)
Cu1—Cu1i 2.6935 (14) C12—H12A 0.9300
S1—C9 1.779 (5) C4—H4A 0.9300
S1—S2 2.0183 (17) N4—C11 1.327 (6)
S2—C10 1.778 (5) C11—H11A 0.9300
N2—C9 1.323 (5) C2—H2B 0.9300
N2—C6 1.352 (6) C8—C7 1.367 (6)
C5—C1 1.390 (6) C8—H8A 0.9300
C5—C4 1.389 (6) C7—H7A 0.9300
C5—C6 1.466 (6) C14—C18 1.379 (7)
N3—C9 1.329 (6) C14—C15 1.392 (7)
N3—C8 1.329 (6) C15—C16 1.376 (7)
N1—C2 1.333 (6) C15—H15A 0.9300
N1—C1 1.330 (5) C16—C17 1.349 (7)
N5—C13 1.324 (6) C16—H16A 0.9300
N5—C10 1.328 (6) C18—N6 1.336 (6)
C1—H1A 0.9300 C18—H18A 0.9300
C6—C7 1.391 (6) C17—N6 1.344 (7)
C10—N4 1.325 (6) C17—H17A 0.9300
C3—C2 1.370 (7) N6—Cu1iii 2.060 (4)
C3—C4 1.368 (6)
Cu1—I1—Cu1i 60.92 (3) C12—C13—C14 123.0 (4)
N1—Cu1—N6ii 115.68 (16) C11—C12—C13 117.4 (4)
N1—Cu1—I1 106.36 (10) C11—C12—H12A 121.3
N6ii—Cu1—I1 106.25 (12) C13—C12—H12A 121.3
N1—Cu1—I1i 105.02 (11) C3—C4—C5 119.8 (4)
N6ii—Cu1—I1i 104.97 (12) C3—C4—H4A 120.1
I1—Cu1—I1i 119.08 (3) C5—C4—H4A 120.1
N1—Cu1—Cu1i 122.23 (11) C10—N4—C11 113.9 (4)
N6ii—Cu1—Cu1i 122.06 (12) N4—C11—C12 123.3 (5)
I1—Cu1—Cu1i 59.59 (2) N4—C11—H11A 118.3
I1i—Cu1—Cu1i 59.49 (3) C12—C11—H11A 118.3
C9—S1—S2 104.18 (16) N1—C2—C3 122.6 (4)
C10—S2—S1 104.60 (17) N1—C2—H2B 118.7
C9—N2—C6 116.6 (4) C3—C2—H2B 118.7
C1—C5—C4 116.6 (4) C7—C8—N3 123.1 (4)
C1—C5—C6 119.6 (4) C7—C8—H8A 118.5
C4—C5—C6 123.8 (4) N3—C8—H8A 118.5
C9—N3—C8 114.2 (4) C8—C7—C6 118.6 (4)
C2—N1—C1 117.8 (4) C8—C7—H7A 120.7
C2—N1—Cu1 121.4 (3) C6—C7—H7A 120.7
C1—N1—Cu1 120.8 (3) C18—C14—C15 117.0 (4)
N2—C9—N3 128.4 (4) C18—C14—C13 122.1 (4)
N2—C9—S1 110.9 (3) C15—C14—C13 120.8 (4)
N3—C9—S1 120.7 (3) C14—C15—C16 118.8 (5)
C13—N5—C10 116.9 (4) C14—C15—H15A 120.6
N1—C1—C5 123.9 (4) C16—C15—H15A 120.6
N1—C1—H1A 118.0 C17—C16—C15 120.0 (5)
C5—C1—H1A 118.0 C17—C16—H16A 120.0
N2—C6—C7 119.1 (4) C15—C16—H16A 120.0
N2—C6—C5 116.7 (4) N6—C18—C14 124.5 (5)
C7—C6—C5 124.2 (4) N6—C18—H18A 117.8
N4—C10—N5 128.4 (4) C14—C18—H18A 117.8
N4—C10—S2 120.6 (3) C16—C17—N6 123.1 (5)
N5—C10—S2 111.1 (3) C16—C17—H17A 118.5
C2—C3—C4 119.3 (4) N6—C17—H17A 118.5
C2—C3—H3B 120.4 C18—N6—C17 116.6 (4)
C4—C3—H3B 120.4 C18—N6—Cu1iii 120.4 (4)
N5—C13—C12 120.0 (4) C17—N6—Cu1iii 122.7 (3)
N5—C13—C14 117.0 (4)
Cu1i—I1—Cu1—N1 118.18 (12) C10—N5—C13—C12 0.7 (7)
Cu1i—I1—Cu1—N6ii −118.04 (12) C10—N5—C13—C14 −179.0 (4)
Cu1i—I1—Cu1—I1i 0.0 N5—C13—C12—C11 0.1 (7)
C9—S1—S2—C10 81.1 (2) C14—C13—C12—C11 179.7 (4)
N6ii—Cu1—N1—C2 75.1 (4) C2—C3—C4—C5 −0.6 (7)
I1—Cu1—N1—C2 −167.2 (3) C1—C5—C4—C3 1.1 (6)
I1i—Cu1—N1—C2 −40.1 (4) C6—C5—C4—C3 −178.3 (4)
Cu1i—Cu1—N1—C2 −103.2 (3) N5—C10—N4—C11 0.0 (8)
N6ii—Cu1—N1—C1 −104.0 (4) S2—C10—N4—C11 179.6 (4)
I1—Cu1—N1—C1 13.7 (4) C10—N4—C11—C12 0.8 (8)
I1i—Cu1—N1—C1 140.8 (3) C13—C12—C11—N4 −0.9 (8)
Cu1i—Cu1—N1—C1 77.7 (4) C1—N1—C2—C3 1.0 (7)
C6—N2—C9—N3 −1.0 (7) Cu1—N1—C2—C3 −178.1 (4)
C6—N2—C9—S1 178.0 (3) C4—C3—C2—N1 −0.5 (7)
C8—N3—C9—N2 −0.2 (7) C9—N3—C8—C7 1.0 (7)
C8—N3—C9—S1 −179.1 (3) N3—C8—C7—C6 −0.6 (8)
S2—S1—C9—N2 176.0 (3) N2—C6—C7—C8 −0.7 (7)
S2—S1—C9—N3 −4.8 (4) C5—C6—C7—C8 179.6 (4)
C2—N1—C1—C5 −0.5 (7) N5—C13—C14—C18 −173.4 (4)
Cu1—N1—C1—C5 178.7 (3) C12—C13—C14—C18 6.9 (7)
C4—C5—C1—N1 −0.5 (7) N5—C13—C14—C15 7.5 (7)
C6—C5—C1—N1 178.9 (4) C12—C13—C14—C15 −172.2 (5)
C9—N2—C6—C7 1.4 (6) C18—C14—C15—C16 −0.2 (7)
C9—N2—C6—C5 −178.8 (4) C13—C14—C15—C16 178.9 (4)
C1—C5—C6—N2 −14.3 (6) C14—C15—C16—C17 −0.6 (8)
C4—C5—C6—N2 165.0 (4) C15—C14—C18—N6 0.0 (7)
C1—C5—C6—C7 165.5 (4) C13—C14—C18—N6 −179.1 (4)
C4—C5—C6—C7 −15.2 (7) C15—C16—C17—N6 1.6 (8)
C13—N5—C10—N4 −0.8 (7) C14—C18—N6—C17 0.9 (7)
C13—N5—C10—S2 179.6 (3) C14—C18—N6—Cu1iii −174.0 (4)
S1—S2—C10—N4 −4.1 (4) C16—C17—N6—C18 −1.7 (8)
S1—S2—C10—N5 175.5 (3) C16—C17—N6—Cu1iii 173.0 (4)

Symmetry codes: (i) −x+1, −y+2, −z; (ii) x, y+1, z−1; (iii) x, y−1, z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HY2260).

References

  1. Brandenburg, K. (1999). DIAMOND Crystal Impact GbR, Bonn, Germany.
  2. Bruker (2001). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Bruker (2007). APEX2 and SAINT-Plus Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Horikoshi, R. & Mochida, T. (2006). Coord. Chem. Rev.250, 2595–2609.
  5. Ji, J.-F., Li, L. & Zhu, H.-B. (2009). Acta Cryst. E65, o1253. [DOI] [PMC free article] [PubMed]
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Zhu, H.-B., Wang, H., Kong, F., Gou, S.-H. & Sun, Y.-M. (2009). J. Mol. Struct.936, 99–103.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809052325/hy2260sup1.cif

e-66-00m41-sup1.cif (19.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809052325/hy2260Isup2.hkl

e-66-00m41-Isup2.hkl (175KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES