Table 1.
Peptide Sequences Selected from Peptide Library against Ubp-M BUZ Domaina
| Class I | Class II | HPQXX | FDAGK |
| WYAGG | LSDGF | HPQRY | VASGL |
| KFAGG | LQDGF* | WUHPQ | PSHHL |
| RRAGG | RWDGF | WTHPQ | IFISL |
| LHFGG | LYDGF | AEAAM | |
| RKGGG | MDGLF | Class IV | FIYDM |
| MYHGG | XDGMF | IYHQH | HRAGM |
| IRHGG | DGFWF | YVHTH | GMGLM |
| KVHGG | FDGFM* | HSHKT | YDDQM |
| RYIGG | DWDGM | HKHYT | HQKGQ |
| YSKGG | LDGYM | HHHXX | PULGQ |
| QDKGG | UDGYM | QHLTH | YFGKQ |
| IAKGG* | WDGYS | KIQLQ | |
| RWKGG | NDGFW | Class V | SIWUR |
| MFKGG | HDGFY | PSDHV* | DMUGR |
| MNKGG | FRDGY | PSDYV | UUKSS |
| KYKGG | LMDGY | YRFDA | QKKRT |
| EFKGG | YFDGY | QFLDA | HQVNW |
| NNKGG | LFDGY | KGGGA | FYEMW |
| HTKGG | VVVPU | YTHRV | |
| HRLGG | Class III | LDHRD | FRAGR |
| NPLGG | RHPQA | SVIKE | ESHGD |
| KSMGG | HPQNU | HGMSE | RNRNV |
| YGPGG | THPQF | UKFAF | KRYHH |
| YFQGG | HPQUG | DLVGF | YINGY |
| IIQGG | HPQWG | LHFLF | LFWMY |
| DIRGG | HPQWG | ISVQF | QRDTY |
| DKRGG | SHPQN | UGLVF | PDIWY |
| MGRGG | HPQRP | LRKMG | |
| SPRGG | WRHPQ | RLRMG | |
| KLRGG | WNHPQ | MITWG | |
| IMRGG | LYHPQ | YNSGH | |
| RURGG | GWHPQ | PFYMH | |
| UFYGG | RHPQQ | WGPYH | |
| IUYGG | WHPQR | FMUAI | |
| AKYGG | HPQXX | QLYQI |
a
M, norleucine; U, (S)-2-aminobutryic acid; X, amino acids whose identity could not be unambiguously determined.
*
sequences selected for resynthesis and binding analysis.