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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Jun 16;66(Pt 7):o1649. doi: 10.1107/S1600536810021902

(3-Pyrid­yl)methanaminium 4-nitro­phenolate 4-nitro­phenol solvate

Yuan Zhang a,*, Meng Ting Han a
PMCID: PMC3006836  PMID: 21587877

Abstract

In the crystal structure of the title compound, C6H9N2 +·C6H4NO3 ·C6H5NO3, ions and mol­ecules are connected via inter­molecular N—H⋯O, N—H⋯N, O—H⋯O and C—H⋯O hydrogen bonds into a three-dimensional network.

Related literature

For background to the development of ferroelectric pure organic or inorganic compounds, see: Haertling et al. (1999); Homes et al. (2001). For our recent reports on the synthesis of a variety of compounds which have potential piezoelectric and ferroelectric properties, see: Fu et al. (2009); Hang et al. (2009).graphic file with name e-66-o1649-scheme1.jpg

Experimental

Crystal data

  • C6H9N2 +·C6H4NO3 ·C6H5NO3

  • M r = 386.36

  • Triclinic, Inline graphic

  • a = 6.3666 (13) Å

  • b = 7.4451 (15) Å

  • c = 21.262 (4) Å

  • α = 92.41 (3)°

  • β = 95.56 (3)°

  • γ = 113.99 (3)°

  • V = 912.8 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 293 K

  • 0.20 × 0.20 × 0.20 mm

Data collection

  • Rigaku Mercury2 diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.825, T max = 1.000

  • 9547 measured reflections

  • 4182 independent reflections

  • 2896 reflections with I > 2σ(I)

  • R int = 0.034

Refinement

  • R[F 2 > 2σ(F 2)] = 0.054

  • wR(F 2) = 0.140

  • S = 1.05

  • 4182 reflections

  • 253 parameters

  • H-atom parameters constrained

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.25 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810021902/jh2162sup1.cif

e-66-o1649-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021902/jh2162Isup2.hkl

e-66-o1649-Isup2.hkl (204.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O2i 0.89 2.09 2.952 (2) 162
N1—H1B⋯O3ii 0.89 1.87 2.753 (2) 169
N1—H1C⋯N2iii 0.89 2.16 2.866 (2) 136
O4—H4A⋯O3 0.96 1.58 2.5385 (19) 173
C1—H1D⋯O5iv 0.93 2.52 3.229 (3) 133
C2—H2A⋯O6v 0.93 2.58 3.327 (3) 138
C8—H10A⋯O4iii 0.93 2.54 3.462 (3) 169

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic.

Acknowledgments

The authors are grateful to the starter fund of Southeast University for financial support to buy the X-ray diffractometer.

supplementary crystallographic information

Comment

At present, much attention in ferroelectric material field is focused on developing ferroelectric pure organic or inorganic compounds (Haertling et al. 1999; Homes et al. 2001). Recently we have reported the synthesis of a variety of compounds (Fu et al., 2009; Hang et al., 2009), which have potential piezoelectric and ferroelectric properties. In order to find more dielectric ferroelectric materials, we investigate the physical properties of the title compound(Fig. 1). The dielectric constant of the title compound as a function of temperature indicates that the permittivity is basically temperature-independent (dielectric constant equaling to 2.8 to 4.6), suggesting that this compound should be not a real ferroelectrics or there may be no distinct phase transition occurred within the measured temperature range. Similarly, below the melting point (399 K) of the compound, the dielectric constant as a function of temperature also goes smoothly, and there is no dielectric anomaly observed (dielectric constant equaling to 2.8 to 4.6).Herein, we report the synthesis and crystal structure of the title compound.

The molecular structure of the title compound is shown in Fig. 1. There are one 4-nitrophenolate anion, an substituted ammonium cation and a neutral 4-nitrophenol molecule in the asymmetric unit. Molecules of the title compound have normal geometric parameters. The bond lengths and angles are within their normal ranges. All pyridine rings are, of course, planar. As can be seen from the packing diagram (Fig. 2), molecules are connected via intermolecular C—H···O and O—H···N hydrogen bonds to form a three dimensional network. Dipole–dipole and van der Waals interactions are effective in the molecular packing.

Experimental

4-nitrophenol (2.085 g, 0.015 mol) was added slowly to a solution of pyridin-3-ylmethanamine (1.62 g, 0.015 mol) in methanol.After several days, the title compound was formed and recrystallized from solution to afford colourless prismatic crystals suitable for X-ray analysis.

Refinement

H atoms were positioned geometrically and refined using a riding model, with C—H(aromatic) = 0.93 and 0.97 (methylene) Å, N—H = 0.89 Å and O—H = 0.97 Å and with Uiso(H) = 1.3–1.5Ueq(C, N, O).

Figures

Fig. 1.

Fig. 1.

Perspective structure of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

The crystal packing of the title compound viewed along the a axis showing the hydrogen bondings network. Some of the H atoms have been ommitted for clarity.

Crystal data

C6H9N2+·C6H4NO3·C6H5nO3 Z = 2
Mr = 386.36 F(000) = 404
Triclinic, P1 Dx = 1.406 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 6.3666 (13) Å Cell parameters from 4182 reflections
b = 7.4451 (15) Å θ = 2.6–27.5°
c = 21.262 (4) Å µ = 0.11 mm1
α = 92.41 (3)° T = 293 K
β = 95.56 (3)° Prism, colorless
γ = 113.99 (3)° 0.20 × 0.20 × 0.20 mm
V = 912.8 (3) Å3

Data collection

Rigaku Mercury2 diffractometer 4182 independent reflections
Radiation source: fine-focus sealed tube 2896 reflections with I > 2σ(I)
graphite Rint = 0.034
Detector resolution: 13.6612 pixels mm-1 θmax = 27.5°, θmin = 3.0°
CCD_Profile_fitting scans h = −8→8
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) k = −9→9
Tmin = 0.825, Tmax = 1.000 l = −27→27
9547 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140 H-atom parameters constrained
S = 1.05 w = 1/[σ2(Fo2) + (0.0576P)2 + 0.2125P] where P = (Fo2 + 2Fc2)/3
4182 reflections (Δ/σ)max < 0.001
253 parameters Δρmax = 0.16 e Å3
0 restraints Δρmin = −0.25 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O3 0.3538 (2) 0.0490 (2) 0.19323 (6) 0.0471 (3)
O4 0.7520 (2) 0.0641 (2) 0.23068 (6) 0.0490 (4)
H4A 0.6012 0.0634 0.2194 0.074*
C10 0.2665 (3) 0.2431 (3) 0.01944 (8) 0.0389 (4)
N3 0.2243 (3) 0.2980 (2) −0.04283 (8) 0.0481 (4)
C7 0.3307 (3) 0.1152 (3) 0.13814 (8) 0.0369 (4)
O2 0.3528 (3) 0.2970 (2) −0.08282 (7) 0.0609 (4)
O1 0.0584 (3) 0.3409 (3) −0.05577 (7) 0.0687 (5)
C9 0.1125 (3) 0.2297 (3) 0.06264 (9) 0.0442 (5)
H9A −0.0114 0.2633 0.0522 0.053*
C8 0.1442 (3) 0.1664 (3) 0.12100 (9) 0.0438 (4)
H10A 0.0403 0.1572 0.1499 0.053*
C13 0.8177 (3) 0.1128 (3) 0.29326 (8) 0.0388 (4)
C12 0.4868 (3) 0.1361 (3) 0.09345 (9) 0.0445 (5)
H12A 0.6144 0.1074 0.1040 0.053*
C11 0.4552 (3) 0.1978 (3) 0.03479 (9) 0.0445 (5)
H11A 0.5589 0.2091 0.0057 0.053*
C18 0.6884 (3) 0.1667 (3) 0.33310 (9) 0.0488 (5)
H18A 0.5513 0.1731 0.3165 0.059*
C16 0.9669 (4) 0.2016 (3) 0.42097 (9) 0.0523 (5)
C14 1.0262 (3) 0.1105 (3) 0.31834 (9) 0.0476 (5)
H14A 1.1167 0.0798 0.2917 0.057*
C15 1.0994 (4) 0.1534 (3) 0.38222 (10) 0.0530 (5)
H15A 1.2379 0.1497 0.3991 0.064*
C17 0.7627 (4) 0.2106 (3) 0.39719 (10) 0.0570 (6)
H17A 0.6761 0.2459 0.4240 0.068*
O5 1.2363 (4) 0.2523 (5) 0.50752 (9) 0.1289 (10)
O6 0.9263 (4) 0.2807 (4) 0.52407 (9) 0.1112 (8)
N4 1.0492 (5) 0.2488 (4) 0.48875 (10) 0.0792 (7)
N1 −0.0537 (3) 0.7260 (2) 0.20070 (7) 0.0414 (4)
H1A −0.1686 0.7006 0.1696 0.062*
H1B 0.0690 0.8325 0.1935 0.062*
H1C −0.0989 0.7476 0.2375 0.062*
N2 0.5902 (3) 0.6209 (3) 0.28249 (8) 0.0502 (4)
C1 0.5678 (4) 0.6498 (3) 0.34345 (9) 0.0485 (5)
H1D 0.6919 0.6693 0.3739 0.058*
C4 0.2013 (3) 0.5896 (3) 0.25514 (9) 0.0398 (4)
C5 0.4074 (3) 0.5913 (3) 0.24015 (9) 0.0466 (5)
H5A 0.4205 0.5703 0.1975 0.056*
C3 0.1849 (3) 0.6229 (3) 0.31859 (9) 0.0469 (5)
H3A 0.0499 0.6254 0.3309 0.056*
C6 0.0087 (4) 0.5549 (3) 0.20322 (10) 0.0491 (5)
H6A 0.0559 0.5305 0.1628 0.059*
H6C −0.1262 0.4384 0.2101 0.059*
C2 0.3695 (3) 0.6522 (3) 0.36331 (9) 0.0490 (5)
H2A 0.3605 0.6733 0.4062 0.059*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O3 0.0441 (8) 0.0624 (9) 0.0358 (7) 0.0228 (7) 0.0022 (6) 0.0128 (6)
O4 0.0430 (8) 0.0695 (9) 0.0332 (7) 0.0231 (7) −0.0002 (6) 0.0017 (6)
C10 0.0433 (10) 0.0396 (10) 0.0295 (9) 0.0146 (8) −0.0031 (7) 0.0008 (7)
N3 0.0561 (11) 0.0485 (10) 0.0345 (9) 0.0185 (8) −0.0034 (8) 0.0026 (7)
C7 0.0358 (9) 0.0402 (10) 0.0305 (9) 0.0128 (8) −0.0018 (7) 0.0015 (7)
O2 0.0672 (10) 0.0792 (11) 0.0352 (8) 0.0280 (8) 0.0083 (7) 0.0124 (7)
O1 0.0807 (12) 0.0936 (12) 0.0480 (9) 0.0546 (10) −0.0054 (8) 0.0147 (8)
C9 0.0437 (11) 0.0536 (11) 0.0404 (10) 0.0265 (9) −0.0004 (8) 0.0038 (9)
C8 0.0433 (11) 0.0561 (12) 0.0370 (10) 0.0249 (9) 0.0074 (8) 0.0044 (9)
C13 0.0389 (10) 0.0422 (10) 0.0324 (9) 0.0143 (8) 0.0020 (7) 0.0050 (8)
C12 0.0398 (10) 0.0605 (12) 0.0386 (10) 0.0267 (9) 0.0014 (8) 0.0068 (9)
C11 0.0412 (10) 0.0563 (12) 0.0360 (10) 0.0198 (9) 0.0059 (8) 0.0037 (8)
C18 0.0410 (11) 0.0651 (13) 0.0432 (11) 0.0253 (10) 0.0035 (8) 0.0031 (9)
C16 0.0573 (13) 0.0654 (13) 0.0322 (10) 0.0250 (11) −0.0012 (9) 0.0009 (9)
C14 0.0441 (11) 0.0602 (12) 0.0420 (11) 0.0264 (10) 0.0024 (8) −0.0029 (9)
C15 0.0458 (12) 0.0689 (14) 0.0451 (12) 0.0283 (11) −0.0090 (9) −0.0022 (10)
C17 0.0527 (13) 0.0778 (15) 0.0436 (12) 0.0291 (12) 0.0128 (9) −0.0005 (11)
O5 0.1125 (19) 0.228 (3) 0.0508 (12) 0.088 (2) −0.0332 (12) −0.0189 (14)
O6 0.1272 (19) 0.172 (2) 0.0420 (10) 0.0706 (18) 0.0152 (11) −0.0083 (12)
N4 0.0898 (17) 0.1082 (18) 0.0373 (11) 0.0416 (14) −0.0021 (11) −0.0018 (11)
N1 0.0396 (9) 0.0564 (10) 0.0309 (8) 0.0226 (8) 0.0024 (6) 0.0071 (7)
N2 0.0444 (10) 0.0676 (11) 0.0412 (9) 0.0260 (9) 0.0038 (7) 0.0050 (8)
C1 0.0471 (11) 0.0589 (12) 0.0383 (11) 0.0217 (10) −0.0015 (8) 0.0085 (9)
C4 0.0421 (10) 0.0377 (10) 0.0379 (10) 0.0159 (8) −0.0004 (8) 0.0047 (8)
C5 0.0499 (12) 0.0566 (12) 0.0343 (10) 0.0232 (10) 0.0043 (8) 0.0016 (9)
C3 0.0431 (11) 0.0576 (12) 0.0430 (11) 0.0232 (10) 0.0075 (8) 0.0076 (9)
C6 0.0529 (12) 0.0454 (11) 0.0462 (12) 0.0212 (10) −0.0091 (9) −0.0012 (9)
C2 0.0507 (12) 0.0643 (13) 0.0329 (10) 0.0235 (10) 0.0088 (8) 0.0081 (9)

Geometric parameters (Å, °)

O3—C7 1.308 (2) C14—C15 1.373 (3)
O4—C13 1.344 (2) C14—H14A 0.9300
O4—H4A 0.9646 C15—H15A 0.9300
C10—C9 1.385 (3) C17—H17A 0.9300
C10—C11 1.387 (3) O5—N4 1.209 (3)
C10—N3 1.435 (2) O6—N4 1.218 (3)
N3—O1 1.232 (2) N1—C6 1.482 (2)
N3—O2 1.238 (2) N1—H1A 0.8900
C7—C8 1.409 (3) N1—H1B 0.8900
C7—C12 1.409 (3) N1—H1C 0.8900
C9—C8 1.371 (3) N2—C1 1.336 (3)
C9—H9A 0.9300 N2—C5 1.336 (3)
C8—H10A 0.9300 C1—C2 1.376 (3)
C13—C14 1.389 (3) C1—H1D 0.9300
C13—C18 1.389 (3) C4—C5 1.375 (3)
C12—C11 1.372 (3) C4—C3 1.383 (3)
C12—H12A 0.9300 C4—C6 1.498 (3)
C11—H11A 0.9300 C5—H5A 0.9300
C18—C17 1.378 (3) C3—C2 1.375 (3)
C18—H18A 0.9300 C3—H3A 0.9300
C16—C15 1.370 (3) C6—H6A 0.9700
C16—C17 1.377 (3) C6—H6C 0.9700
C16—N4 1.462 (3) C2—H2A 0.9300
C13—O4—H4A 110.0 C14—C15—H15A 120.3
C9—C10—C11 121.06 (17) C16—C17—C18 119.14 (19)
C9—C10—N3 119.04 (17) C16—C17—H17A 120.4
C11—C10—N3 119.86 (18) C18—C17—H17A 120.4
O1—N3—O2 121.47 (17) O5—N4—O6 122.7 (2)
O1—N3—C10 119.44 (17) O5—N4—C16 118.4 (2)
O2—N3—C10 119.07 (17) O6—N4—C16 119.0 (2)
O3—C7—C8 120.54 (17) C6—N1—H1A 109.5
O3—C7—C12 122.14 (16) C6—N1—H1B 109.5
C8—C7—C12 117.31 (16) H1A—N1—H1B 109.5
C8—C9—C10 119.43 (17) C6—N1—H1C 109.5
C8—C9—H9A 120.3 H1A—N1—H1C 109.5
C10—C9—H9A 120.3 H1B—N1—H1C 109.5
C9—C8—C7 121.42 (18) C1—N2—C5 116.81 (18)
C9—C8—H10A 119.3 N2—C1—C2 123.07 (19)
C7—C8—H10A 119.3 N2—C1—H1D 118.5
O4—C13—C14 117.63 (17) C2—C1—H1D 118.5
O4—C13—C18 123.06 (17) C5—C4—C3 117.13 (18)
C14—C13—C18 119.31 (17) C5—C4—C6 119.56 (18)
C11—C12—C7 121.54 (17) C3—C4—C6 123.31 (18)
C11—C12—H12A 119.2 N2—C5—C4 124.60 (18)
C7—C12—H12A 119.2 N2—C5—H5A 117.7
C12—C11—C10 119.20 (18) C4—C5—H5A 117.7
C12—C11—H11A 120.4 C2—C3—C4 119.60 (19)
C10—C11—H11A 120.4 C2—C3—H3A 120.2
C17—C18—C13 120.22 (19) C4—C3—H3A 120.2
C17—C18—H18A 119.9 N1—C6—C4 111.67 (16)
C13—C18—H18A 119.9 N1—C6—H6A 109.3
C15—C16—C17 121.48 (19) C4—C6—H6A 109.3
C15—C16—N4 118.6 (2) N1—C6—H6C 109.3
C17—C16—N4 119.9 (2) C4—C6—H6C 109.3
C15—C14—C13 120.36 (19) H6A—C6—H6C 107.9
C15—C14—H14A 119.8 C3—C2—C1 118.79 (19)
C13—C14—H14A 119.8 C3—C2—H2A 120.6
C16—C15—C14 119.43 (19) C1—C2—H2A 120.6
C16—C15—H15A 120.3

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O2i 0.89 2.09 2.952 (2) 162
N1—H1B···O3ii 0.89 1.87 2.753 (2) 169
N1—H1C···N2iii 0.89 2.16 2.866 (2) 136
O4—H4A···O3 0.96 1.58 2.5385 (19) 173
C1—H1D···O5iv 0.93 2.52 3.229 (3) 133
C2—H2A···O6v 0.93 2.58 3.327 (3) 138
C8—H10A···O4iii 0.93 2.54 3.462 (3) 169

Symmetry codes: (i) −x, −y+1, −z; (ii) x, y+1, z; (iii) x−1, y, z; (iv) −x+2, −y+1, −z+1; (v) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: JH2162).

References

  1. Fu, D. W., Ge, J. Z., Dai, J., Ye, H. Y. & Qu, Z. R. (2009). Inorg. Chem. Commun.12, 994–997.
  2. Haertling, G. H. (1999). J. Am. Ceram. Soc.82, 797–810.
  3. Hang, T., Fu, D. W., Ye, Q. & Xiong, R. G. (2009). Cryst. Growth Des.5, 2026–2029.
  4. Homes, C. C., Vogt, T., Shapiro, S. M., Wakimoto, S. & Ramirez, A. P. (2001). Science, 293, 673–676. [DOI] [PubMed]
  5. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810021902/jh2162sup1.cif

e-66-o1649-sup1.cif (18.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021902/jh2162Isup2.hkl

e-66-o1649-Isup2.hkl (204.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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