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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Jun 16;66(Pt 7):o1655. doi: 10.1107/S1600536810022051

Ethyl 3,4-dimethyl-5-[(E)-(phenyl­imino)­meth­yl]-1H-pyrrole-2-carboxyl­ate

Wei-Na Wu a,*, Lei Yang a, Xiao-Xia Li b, Bao-Feng Qin c, Qiu-Fen Wang a
PMCID: PMC3006869  PMID: 21587883

Abstract

In the title compound, C16H18N2O2, the mol­ecule adopts an E conformation about the C=N double bond. The dihedral angle between the pyrrole and phenyl rings is 41.55 (8)°. In the crystal structure, pairs of inter­molecular N—H⋯O hydrogen bonds link the mol­ecules into centrosymmetric dimers. In the dimer, the two pyrrole rings are almost coplanar and the two phenyl rings are parallel to each other.

Related literature

For the structure of 5-formyl-3,4-dimethyl-1H-pyrrole-2-carboxyl­ate, see Wu et al. (2009). For the similar structure of ethyl 5-[(2,3-dimethyl-5-oxo-1-phenyl-2,5-dihydro-1H-pyra­zol-4-yl)imino­meth­yl]-3,4-dimethyl-1H-pyrrole-2-carboxyl­ate, see Wang et al. (2009). For the coordination abilities for metal ions of pyrrol-2-yl­methyl­ene­amine ligands, see: Wang et al. (2010); Yang et al. (2003).graphic file with name e-66-o1655-scheme1.jpg

Experimental

Crystal data

  • C16H18N2O2

  • M r = 270.32

  • Monoclinic, Inline graphic

  • a = 12.5463 (7) Å

  • b = 14.6525 (9) Å

  • c = 8.4490 (5) Å

  • β = 105.042 (3)°

  • V = 1500.00 (15) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 296 K

  • 0.35 × 0.26 × 0.18 mm

Data collection

  • Bruker SMART CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.975, T max = 0.986

  • 12405 measured reflections

  • 3413 independent reflections

  • 2078 reflections with I > 2σ(I)

  • R int = 0.030

Refinement

  • R[F 2 > 2σ(F 2)] = 0.044

  • wR(F 2) = 0.144

  • S = 1.01

  • 3413 reflections

  • 184 parameters

  • H-atom parameters constrained

  • Δρmax = 0.20 e Å−3

  • Δρmin = −0.16 e Å−3

Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810022051/gw2080sup1.cif

e-66-o1655-sup1.cif (18.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022051/gw2080Isup2.hkl

e-66-o1655-Isup2.hkl (167.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2A⋯O3i 0.86 2.06 2.8883 (18) 162

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors are grateful for financial support from the Doctoral Foundation of Henan Polytechnic University (B2009–65 648359 and B2009–70 648364).

supplementary crystallographic information

Comment

Pyrrol-2-ylmethyleneamine ligands have attracted much recent attention due to their excellent coordination abilities for metal ions (Yang et al., 2006 & Wang et al., 2010). As part of our ongoing search for a biologically active material, the title compound was synthesized and characterized by X-ray diffraction.

In the title compound, all the bond lengths are comparable with those observed in the other similar compound (Wang et al., 2009). The molecule adopts an E configuration at the C=N double bond. The dihedral angle between pyrrole ring (N2/C8–C11, r.m.s. deviation 0.0035 Å) and phenyl ring (C1–C6, r.m.s. deviation 0.0036 Å) is 41.55 (8)°. In the crystal, the molecules are linked into a centrosymmetric dimer by two intermolecular N—H···O hydrogen bonds, forming a R22(10) ring motif (Table1, Fig. 2). In the dimer, the two pyrrole rings are almost coplanar (r.m.s. deviation 0.028 Å) and the two phenyl rings are parallel with each other. The crystal packing is further stabilized by the stacking between the C=N with the adjacent pyrrole ring, with centroid–centroid distances of 3.642 Å.

Experimental

A quantity of aniline (0.186 g, 2 mmol) was dissolved in ethanol (10 ml), then an ethanol solution (10 ml) containing ethyl 5-formyl-3,4-dimethyl-1H-pyrrole-2-carboxylate (0.39 g, 2 mmol) was added dropwise at room temperature. After stirring for 4 h, the mixture was filtered and set aside to crystallize at room temperature for several days, giving yellow block crystals.

Refinement

All H atoms were placed in calculated positions, with C—H = 0.93–0.97 Å and N—H = 0.86 Å, and were thereafter treated as riding, with Uiso(H) values of 1.5Ueq(C) for methyl groups and 1.2Ueq(C,N) for others.

Figures

Fig. 1.

Fig. 1.

The molecular structure shown with 50% probability displacement ellipsoids.

Fig. 2.

Fig. 2.

Crystal packing of the title compound showing the dimers formed by hydrogen bonds (dashed lines).

Crystal data

C16H18N2O2 F(000) = 576
Mr = 270.32 Dx = 1.197 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 5515 reflections
a = 12.5463 (7) Å θ = 2.2–26.2°
b = 14.6525 (9) Å µ = 0.08 mm1
c = 8.4490 (5) Å T = 296 K
β = 105.042 (3)° Block, yellow
V = 1500.00 (15) Å3 0.35 × 0.26 × 0.18 mm
Z = 4

Data collection

Bruker SMART CCD diffractometer 3413 independent reflections
Radiation source: fine-focus sealed tube 2078 reflections with I > 2σ(I)
graphite Rint = 0.030
phi and ω scans θmax = 27.6°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −14→16
Tmin = 0.975, Tmax = 0.986 k = −14→19
12405 measured reflections l = −10→8

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.144 H-atom parameters constrained
S = 1.01 w = 1/[σ2(Fo2) + (0.0645P)2 + 0.3198P] where P = (Fo2 + 2Fc2)/3
3413 reflections (Δ/σ)max = 0.007
184 parameters Δρmax = 0.20 e Å3
0 restraints Δρmin = −0.16 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N2 0.02009 (11) 0.14614 (9) 0.03549 (16) 0.0474 (3)
H2A −0.0130 0.0983 −0.0125 0.057*
O2 0.24807 (9) 0.06709 (8) 0.35169 (14) 0.0576 (3)
O3 0.12317 (10) −0.01491 (9) 0.17093 (15) 0.0612 (4)
C14 0.15990 (13) 0.05888 (12) 0.22476 (19) 0.0462 (4)
C11 0.11351 (13) 0.14570 (11) 0.16129 (19) 0.0444 (4)
N1 −0.15004 (12) 0.33049 (10) −0.16873 (18) 0.0545 (4)
C8 −0.01284 (13) 0.23366 (11) −0.0027 (2) 0.0466 (4)
C10 0.14228 (13) 0.23604 (11) 0.20337 (19) 0.0458 (4)
C4 −0.25266 (15) 0.33933 (12) −0.2860 (2) 0.0543 (5)
C7 −0.11212 (14) 0.25067 (12) −0.1305 (2) 0.0514 (4)
H7 −0.1500 0.2012 −0.1874 0.062*
C9 0.06264 (13) 0.29161 (11) 0.1002 (2) 0.0465 (4)
C12 0.05849 (16) 0.39340 (12) 0.1001 (2) 0.0619 (5)
H12A 0.0308 0.4150 −0.0102 0.093*
H12B 0.1313 0.4172 0.1452 0.093*
H12C 0.0106 0.4135 0.1652 0.093*
C3 −0.26627 (17) 0.41010 (14) −0.3976 (2) 0.0634 (5)
H3 −0.2072 0.4482 −0.3985 0.076*
C13 0.24063 (14) 0.26959 (13) 0.3311 (2) 0.0606 (5)
H13A 0.2367 0.3347 0.3399 0.091*
H13B 0.3067 0.2533 0.3006 0.091*
H13C 0.2416 0.2422 0.4347 0.091*
C2 −0.3674 (2) 0.42436 (17) −0.5076 (3) 0.0782 (7)
H2 −0.3756 0.4714 −0.5838 0.094*
C15 0.29547 (16) −0.01538 (14) 0.4354 (2) 0.0635 (5)
H15A 0.3295 −0.0515 0.3656 0.076*
H15B 0.2388 −0.0519 0.4644 0.076*
C16 0.37962 (17) 0.01386 (17) 0.5854 (3) 0.0793 (6)
H16A 0.4327 0.0528 0.5553 0.119*
H16B 0.4163 −0.0389 0.6416 0.119*
H16C 0.3442 0.0465 0.6562 0.119*
C5 −0.34233 (16) 0.28429 (15) −0.2859 (3) 0.0727 (6)
H5 −0.3348 0.2364 −0.2116 0.087*
C1 −0.4555 (2) 0.37029 (19) −0.5058 (3) 0.0869 (7)
H1 −0.5238 0.3809 −0.5789 0.104*
C6 −0.44248 (18) 0.30041 (18) −0.3958 (3) 0.0893 (7)
H6 −0.5023 0.2631 −0.3950 0.107*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N2 0.0494 (8) 0.0418 (8) 0.0461 (8) 0.0011 (6) 0.0038 (6) −0.0006 (6)
O2 0.0557 (7) 0.0545 (8) 0.0523 (7) 0.0022 (6) −0.0044 (6) 0.0051 (6)
O3 0.0666 (8) 0.0467 (8) 0.0594 (8) 0.0035 (6) −0.0030 (6) −0.0027 (6)
C14 0.0456 (9) 0.0511 (11) 0.0405 (9) 0.0002 (8) 0.0086 (7) −0.0011 (7)
C11 0.0459 (9) 0.0457 (9) 0.0396 (9) −0.0005 (7) 0.0075 (7) 0.0011 (7)
N1 0.0567 (9) 0.0494 (9) 0.0542 (9) 0.0074 (7) 0.0083 (7) 0.0051 (7)
C8 0.0506 (9) 0.0433 (9) 0.0460 (9) 0.0041 (7) 0.0128 (7) 0.0036 (7)
C10 0.0492 (9) 0.0479 (10) 0.0420 (9) −0.0043 (7) 0.0149 (7) −0.0020 (7)
C4 0.0579 (10) 0.0494 (10) 0.0528 (11) 0.0119 (8) 0.0092 (8) 0.0005 (8)
C7 0.0540 (10) 0.0481 (10) 0.0496 (10) 0.0036 (8) 0.0089 (8) 0.0022 (8)
C9 0.0512 (9) 0.0446 (9) 0.0465 (9) −0.0008 (7) 0.0176 (8) 0.0013 (7)
C12 0.0680 (12) 0.0455 (10) 0.0714 (13) −0.0028 (9) 0.0164 (10) −0.0009 (9)
C3 0.0763 (13) 0.0590 (12) 0.0550 (11) 0.0166 (10) 0.0170 (10) 0.0081 (9)
C13 0.0593 (11) 0.0601 (12) 0.0583 (12) −0.0110 (9) 0.0079 (9) −0.0053 (9)
C2 0.0990 (17) 0.0783 (15) 0.0530 (12) 0.0344 (14) 0.0118 (12) 0.0095 (11)
C15 0.0636 (11) 0.0639 (12) 0.0568 (11) 0.0111 (9) 0.0046 (9) 0.0116 (9)
C16 0.0634 (12) 0.1025 (18) 0.0616 (13) 0.0050 (12) −0.0025 (10) 0.0135 (12)
C5 0.0632 (12) 0.0629 (13) 0.0847 (15) 0.0045 (10) 0.0058 (11) 0.0142 (10)
C1 0.0742 (15) 0.0951 (19) 0.0755 (16) 0.0244 (14) −0.0093 (12) −0.0066 (13)
C6 0.0633 (13) 0.0848 (17) 0.106 (2) 0.0012 (12) −0.0026 (13) −0.0002 (15)

Geometric parameters (Å, °)

N2—C8 1.360 (2) C12—H12C 0.9600
N2—C11 1.363 (2) C3—C2 1.381 (3)
N2—H2A 0.8600 C3—H3 0.9300
O2—C14 1.3313 (18) C13—H13A 0.9600
O2—C15 1.448 (2) C13—H13B 0.9600
O3—C14 1.216 (2) C13—H13C 0.9600
C14—C11 1.443 (2) C2—C1 1.363 (3)
C11—C10 1.394 (2) C2—H2 0.9300
N1—C7 1.272 (2) C15—C16 1.487 (3)
N1—C4 1.412 (2) C15—H15A 0.9700
C8—C9 1.395 (2) C15—H15B 0.9700
C8—C7 1.443 (2) C16—H16A 0.9600
C10—C9 1.403 (2) C16—H16B 0.9600
C10—C13 1.496 (2) C16—H16C 0.9600
C4—C3 1.382 (2) C5—C6 1.375 (3)
C4—C5 1.384 (3) C5—H5 0.9300
C7—H7 0.9300 C1—C6 1.364 (3)
C9—C12 1.492 (2) C1—H1 0.9300
C12—H12A 0.9600 C6—H6 0.9300
C12—H12B 0.9600
C8—N2—C11 109.65 (13) C4—C3—H3 119.9
C8—N2—H2A 125.2 C2—C3—H3 119.9
C11—N2—H2A 125.2 C10—C13—H13A 109.5
C14—O2—C15 117.92 (14) C10—C13—H13B 109.5
O3—C14—O2 122.44 (15) H13A—C13—H13B 109.5
O3—C14—C11 124.58 (15) C10—C13—H13C 109.5
O2—C14—C11 112.98 (14) H13A—C13—H13C 109.5
N2—C11—C10 107.94 (14) H13B—C13—H13C 109.5
N2—C11—C14 118.44 (14) C1—C2—C3 120.7 (2)
C10—C11—C14 133.60 (15) C1—C2—H2 119.6
C7—N1—C4 118.36 (15) C3—C2—H2 119.6
N2—C8—C9 108.10 (14) O2—C15—C16 106.66 (17)
N2—C8—C7 119.37 (15) O2—C15—H15A 110.4
C9—C8—C7 132.53 (16) C16—C15—H15A 110.4
C11—C10—C9 107.29 (14) O2—C15—H15B 110.4
C11—C10—C13 127.36 (15) C16—C15—H15B 110.4
C9—C10—C13 125.34 (16) H15A—C15—H15B 108.6
C3—C4—C5 118.75 (18) C15—C16—H16A 109.5
C3—C4—N1 118.45 (17) C15—C16—H16B 109.5
C5—C4—N1 122.62 (17) H16A—C16—H16B 109.5
N1—C7—C8 122.82 (16) C15—C16—H16C 109.5
N1—C7—H7 118.6 H16A—C16—H16C 109.5
C8—C7—H7 118.6 H16B—C16—H16C 109.5
C8—C9—C10 107.02 (14) C6—C5—C4 120.0 (2)
C8—C9—C12 126.15 (15) C6—C5—H5 120.0
C10—C9—C12 126.84 (15) C4—C5—H5 120.0
C9—C12—H12A 109.5 C2—C1—C6 119.4 (2)
C9—C12—H12B 109.5 C2—C1—H1 120.3
H12A—C12—H12B 109.5 C6—C1—H1 120.3
C9—C12—H12C 109.5 C1—C6—C5 121.0 (2)
H12A—C12—H12C 109.5 C1—C6—H6 119.5
H12B—C12—H12C 109.5 C5—C6—H6 119.5
C4—C3—C2 120.1 (2)
C15—O2—C14—O3 −5.1 (2) C9—C8—C7—N1 −1.8 (3)
C15—O2—C14—C11 174.30 (15) N2—C8—C9—C10 −0.44 (18)
C8—N2—C11—C10 −0.93 (18) C7—C8—C9—C10 178.79 (17)
C8—N2—C11—C14 177.75 (15) N2—C8—C9—C12 179.75 (15)
O3—C14—C11—N2 2.1 (3) C7—C8—C9—C12 −1.0 (3)
O2—C14—C11—N2 −177.28 (13) C11—C10—C9—C8 −0.12 (18)
O3—C14—C11—C10 −179.64 (17) C13—C10—C9—C8 178.52 (15)
O2—C14—C11—C10 1.0 (3) C11—C10—C9—C12 179.69 (16)
C11—N2—C8—C9 0.85 (18) C13—C10—C9—C12 −1.7 (3)
C11—N2—C8—C7 −178.50 (14) C5—C4—C3—C2 −0.8 (3)
N2—C11—C10—C9 0.63 (18) N1—C4—C3—C2 −176.03 (17)
C14—C11—C10—C9 −177.76 (18) C4—C3—C2—C1 1.3 (3)
N2—C11—C10—C13 −177.97 (15) C14—O2—C15—C16 −171.10 (15)
C14—C11—C10—C13 3.6 (3) C3—C4—C5—C6 0.2 (3)
C7—N1—C4—C3 −141.86 (17) N1—C4—C5—C6 175.21 (19)
C7—N1—C4—C5 43.1 (3) C3—C2—C1—C6 −1.2 (3)
C4—N1—C7—C8 −174.75 (16) C2—C1—C6—C5 0.6 (4)
N2—C8—C7—N1 177.38 (16) C4—C5—C6—C1 −0.1 (4)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2A···O3i 0.86 2.06 2.8883 (18) 162

Symmetry codes: (i) −x, −y, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: GW2080).

References

  1. Bruker (1997). SMART, SAINT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  3. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  4. Wang, Y., Wu, W.-N. & Wang, Q.-F. (2009). Acta Cryst. E65, o1933. [DOI] [PMC free article] [PubMed]
  5. Wang, Y., Wu, W.-N., Wang, Q. & Yang, Z.-Y. (2010). J. Coord. Chem.63, 147–155.
  6. Wu, W.-N., Wang, Y. & Wang, Q.-F. (2009). Acta Cryst. E65, o1661. [DOI] [PMC free article] [PubMed]
  7. Yang, L. Y., Chen, Q. Q., Yang, G. Q. & Ma, J. S. (2003). Tetrahedron, 59, 10037–10041.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810022051/gw2080sup1.cif

e-66-o1655-sup1.cif (18.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022051/gw2080Isup2.hkl

e-66-o1655-Isup2.hkl (167.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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