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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Jun 26;66(Pt 7):o1851. doi: 10.1107/S1600536810024748

1,3-Diallyl-1H-anthra[1,2-d]imidazole-2,6,11(3H)-trione

Zahra Afrakssou a, Youssef Kandri Rodi a, Hafid Zouihri b, El Mokhtar Essassi c, Seik Weng Ng d,*
PMCID: PMC3007069  PMID: 21588049

Abstract

In the title compound, C21H16N2O3, the fused-ring system (r.m.s. deviation = 0.067 Å) is slightly buckled at the carbonyl C atom of the anthracenyl ring system [deviation = 0.177 (1) Å] that is closer to an allyl substituent. The two allyl units lie on the same side of the fused-ring plane but are oriented in opposite directions, with N—C—C—C torsion angles of 126.9 (2) and 116.7 (2)°. In the crystal, the mol­ecules are linked into chains propagating along the b axis by C—H⋯O hydrogen bonds.

Related literature

For a related structure, see: Guimarães et al. (2009).graphic file with name e-66-o1851-scheme1.jpg

Experimental

Crystal data

  • C21H16N2O3

  • M r = 344.36

  • Monoclinic, Inline graphic

  • a = 7.8539 (2) Å

  • b = 11.5822 (3) Å

  • c = 18.1455 (4) Å

  • β = 93.537 (1)°

  • V = 1647.47 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 K

  • 0.40 × 0.35 × 0.20 mm

Data collection

  • Bruker X8 APEXII area-detector diffractometer

  • 22612 measured reflections

  • 4806 independent reflections 4805 in Refinement?

  • 3053 reflections with I > 2σ(I)

  • R int = 0.039

Refinement

  • R[F 2 > 2σ(F 2)] = 0.049

  • wR(F 2) = 0.153

  • S = 1.02

  • 4805 reflections

  • 236 parameters

  • H-atom parameters constrained

  • Δρmax = 0.31 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810024748/ci5112sup1.cif

e-66-o1851-sup1.cif (19.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810024748/ci5112Isup2.hkl

e-66-o1851-Isup2.hkl (235.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C13—H13⋯O3i 0.93 2.49 3.406 (2) 168
C16—H16B⋯O3i 0.97 2.42 3.362 (2) 165

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank Université Mohammed V-Agdal and the University of Malaya for supporting this study.

supplementary crystallographic information

Comment

An imidazol-one such as 1H-anthra[2,1-d]imidazole-2,6,11(3H)-trione, in which the five-membered ring is fused with an anthraquinone system, alkyl halides under catalytic conditions to yield di-N,N'-substituted derivatives that serve as starting reagents for the synthesis of other drugs. The anthraquinone system itself is found in a large number of pigments and dyes. The title compound (Scheme I, Fig. 1) is a deep orange material that may be useful as an organic fluorophone.

The title molecule features four rings that are fused together (r.m.s. deviation 0.067 Å). The fused-ring system is slightly buckled at that carbonyl C-atom, C3, of the anthracenyl system [0.177 (1) Å] that is closer to an allyl substituent. The pendant allyl units lie on the same side of the fused-ring plane but are oriented in opposite directions. The crystal packing is stabilized by C—H···O hydrogen bonds (Table 1).

Experimental

To a solution of 1H-anthra[2,1-d]imidazole-2,6,11(3H)-trione (1.00 g, 0.38 mmol), potassium carbonate (1.56 g,11 mmol) and tetra n-butyl ammonium bromide (0.12 g, 0.38 mmol) in DMF (20 ml)) was added allyl bromide (0.77 ml, 11 mmol). Stirring was continued at room temperature for 24 h. The mixture was filtered and the solvent removed. The residue was extracted with water. The organic compound was chromatographed on a column of silica gel with ethyl acetate-hexane (1/1) as eluent. Orange crystals were isolated when the solvent was allowed to evaporate.

Refinement

H atoms were placed in calculated positions (C–H = 0.93–0.97 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

Displacement ellipsoid plot (Barbour, 2001) of C21H16N2O3 at the 50% probability leve. H atoms are drawn as spheres of arbitrary radii.

Crystal data

C21H16N2O3 F(000) = 720
Mr = 344.36 Dx = 1.388 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 4815 reflections
a = 7.8539 (2) Å θ = 2.2–29.4°
b = 11.5822 (3) Å µ = 0.09 mm1
c = 18.1455 (4) Å T = 293 K
β = 93.537 (1)° Block, orange
V = 1647.47 (7) Å3 0.40 × 0.35 × 0.20 mm
Z = 4

Data collection

Bruker X8 APEXII area-detector diffractometer 3053 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.039
graphite θmax = 30.0°, θmin = 2.1°
φ and ω scans h = −11→11
22612 measured reflections k = −16→16
4806 independent reflections l = −25→25

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049 H-atom parameters constrained
wR(F2) = 0.153 w = 1/[σ2(Fo2) + (0.0755P)2 + 0.2066P] where P = (Fo2 + 2Fc2)/3
S = 1.02 (Δ/σ)max = 0.001
4805 reflections Δρmax = 0.31 e Å3
236 parameters Δρmin = −0.22 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0033 (11)

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.14067 (16) 0.31774 (10) 0.53905 (6) 0.0588 (3)
O2 0.23915 (17) 0.77316 (10) 0.53322 (7) 0.0623 (3)
O3 0.44816 (18) 0.19062 (10) 0.30395 (6) 0.0633 (4)
N1 0.35081 (16) 0.29295 (10) 0.40381 (6) 0.0405 (3)
N2 0.42897 (16) 0.38962 (10) 0.30579 (6) 0.0422 (3)
C1 0.32994 (17) 0.40923 (11) 0.41903 (7) 0.0342 (3)
C2 0.27111 (16) 0.47213 (11) 0.47863 (7) 0.0342 (3)
C3 0.18650 (18) 0.41799 (12) 0.54058 (7) 0.0387 (3)
C4 0.14672 (17) 0.49192 (13) 0.60472 (8) 0.0408 (3)
C5 0.0848 (2) 0.43992 (15) 0.66656 (9) 0.0532 (4)
H5 0.0729 0.3601 0.6683 0.064*
C6 0.0408 (2) 0.50686 (19) 0.72553 (9) 0.0635 (5)
H6 −0.0001 0.4719 0.7671 0.076*
C7 0.0572 (2) 0.62479 (19) 0.72301 (10) 0.0649 (5)
H7 0.0265 0.6693 0.7627 0.078*
C8 0.1187 (2) 0.67763 (16) 0.66225 (10) 0.0557 (4)
H8 0.1301 0.7575 0.6610 0.067*
C9 0.16416 (18) 0.61104 (13) 0.60235 (8) 0.0427 (3)
C10 0.22782 (18) 0.66824 (13) 0.53631 (8) 0.0428 (3)
C11 0.27960 (17) 0.59389 (12) 0.47464 (7) 0.0372 (3)
C12 0.3362 (2) 0.64983 (13) 0.41289 (8) 0.0443 (3)
H12 0.3403 0.7301 0.4122 0.053*
C13 0.38660 (19) 0.58851 (12) 0.35255 (8) 0.0437 (3)
H13 0.4219 0.6261 0.3108 0.052*
C14 0.38263 (17) 0.47023 (12) 0.35652 (7) 0.0368 (3)
C15 0.4124 (2) 0.28065 (13) 0.33395 (8) 0.0451 (4)
C16 0.4861 (2) 0.40982 (14) 0.23155 (7) 0.0462 (4)
H16A 0.5829 0.3603 0.2237 0.055*
H16B 0.5234 0.4893 0.2277 0.055*
C17 0.3483 (2) 0.38657 (17) 0.17310 (9) 0.0595 (5)
H17 0.3070 0.3114 0.1688 0.071*
C18 0.2826 (3) 0.4620 (2) 0.12858 (11) 0.0851 (7)
H18A 0.3206 0.5380 0.1312 0.102*
H18B 0.1969 0.4409 0.0935 0.102*
C19 0.3537 (2) 0.18926 (12) 0.45100 (8) 0.0431 (3)
H19A 0.3615 0.2133 0.5023 0.052*
H19B 0.4552 0.1448 0.4424 0.052*
C20 0.2018 (2) 0.11366 (14) 0.43818 (8) 0.0498 (4)
H20 0.0939 0.1461 0.4403 0.060*
C21 0.2140 (3) 0.00335 (17) 0.42404 (11) 0.0695 (5)
H21A 0.3207 −0.0307 0.4217 0.083*
H21B 0.1158 −0.0411 0.4163 0.083*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0796 (8) 0.0408 (6) 0.0591 (7) −0.0081 (6) 0.0298 (6) −0.0009 (5)
O2 0.0821 (9) 0.0354 (6) 0.0711 (8) −0.0067 (6) 0.0191 (6) −0.0114 (5)
O3 0.1046 (10) 0.0388 (6) 0.0494 (7) 0.0101 (6) 0.0285 (6) −0.0027 (5)
N1 0.0577 (7) 0.0304 (6) 0.0343 (6) 0.0046 (5) 0.0110 (5) 0.0026 (4)
N2 0.0573 (7) 0.0374 (6) 0.0330 (6) 0.0023 (5) 0.0113 (5) 0.0013 (5)
C1 0.0386 (7) 0.0309 (6) 0.0332 (6) 0.0013 (5) 0.0033 (5) 0.0014 (5)
C2 0.0356 (7) 0.0342 (7) 0.0327 (6) 0.0008 (5) 0.0021 (5) 0.0006 (5)
C3 0.0418 (7) 0.0374 (7) 0.0373 (7) 0.0022 (6) 0.0067 (6) 0.0014 (6)
C4 0.0381 (7) 0.0484 (8) 0.0363 (7) 0.0042 (6) 0.0048 (6) −0.0015 (6)
C5 0.0589 (10) 0.0575 (10) 0.0447 (8) 0.0056 (8) 0.0151 (7) 0.0033 (7)
C6 0.0697 (11) 0.0793 (13) 0.0434 (9) 0.0053 (10) 0.0189 (8) −0.0030 (9)
C7 0.0712 (12) 0.0783 (14) 0.0465 (9) 0.0071 (10) 0.0143 (8) −0.0192 (9)
C8 0.0608 (10) 0.0552 (10) 0.0518 (9) 0.0046 (8) 0.0077 (8) −0.0152 (8)
C9 0.0399 (7) 0.0472 (8) 0.0409 (7) 0.0030 (6) 0.0024 (6) −0.0077 (6)
C10 0.0443 (8) 0.0376 (8) 0.0466 (8) −0.0008 (6) 0.0034 (6) −0.0079 (6)
C11 0.0395 (7) 0.0330 (7) 0.0392 (7) 0.0004 (5) 0.0028 (6) −0.0015 (5)
C12 0.0560 (9) 0.0311 (7) 0.0462 (8) −0.0028 (6) 0.0064 (7) 0.0023 (6)
C13 0.0548 (9) 0.0366 (7) 0.0404 (7) −0.0025 (6) 0.0087 (6) 0.0061 (6)
C14 0.0408 (7) 0.0361 (7) 0.0339 (7) 0.0010 (6) 0.0052 (5) 0.0013 (5)
C15 0.0618 (9) 0.0382 (8) 0.0365 (7) 0.0053 (7) 0.0123 (7) 0.0003 (6)
C16 0.0564 (9) 0.0479 (8) 0.0360 (7) −0.0006 (7) 0.0158 (6) 0.0019 (6)
C17 0.0686 (11) 0.0708 (12) 0.0406 (8) −0.0083 (9) 0.0168 (8) −0.0026 (8)
C18 0.0780 (14) 0.131 (2) 0.0468 (10) 0.0076 (13) 0.0107 (9) 0.0108 (12)
C19 0.0573 (9) 0.0331 (7) 0.0394 (7) 0.0057 (6) 0.0076 (6) 0.0057 (6)
C20 0.0611 (10) 0.0430 (8) 0.0458 (8) 0.0004 (7) 0.0067 (7) 0.0062 (7)
C21 0.0869 (13) 0.0486 (10) 0.0739 (13) −0.0104 (10) 0.0114 (10) −0.0024 (9)

Geometric parameters (Å, °)

O1—C3 1.2154 (18) C8—H8 0.93
O2—C10 1.2200 (18) C9—C10 1.483 (2)
O3—C15 1.2170 (17) C10—C11 1.4884 (19)
N1—C1 1.3867 (16) C11—C12 1.3908 (19)
N1—C15 1.3918 (18) C12—C13 1.383 (2)
N1—C19 1.4742 (17) C12—H12 0.93
N2—C15 1.3708 (19) C13—C14 1.372 (2)
N2—C14 1.3757 (17) C13—H13 0.93
N2—C16 1.4647 (17) C16—C17 1.493 (2)
C1—C2 1.4056 (18) C16—H16A 0.97
C1—C14 1.4194 (18) C16—H16B 0.97
C2—C11 1.4139 (19) C17—C18 1.277 (3)
C2—C3 1.4800 (18) C17—H17 0.93
C3—C4 1.4934 (19) C18—H18A 0.93
C4—C9 1.387 (2) C18—H18B 0.93
C4—C5 1.388 (2) C19—C20 1.486 (2)
C5—C6 1.382 (2) C19—H19A 0.97
C5—H5 0.93 C19—H19B 0.97
C6—C7 1.373 (3) C20—C21 1.308 (2)
C6—H6 0.93 C20—H20 0.93
C7—C8 1.375 (3) C21—H21A 0.93
C7—H7 0.93 C21—H21B 0.93
C8—C9 1.397 (2)
C1—N1—C15 109.44 (11) C2—C11—C10 121.50 (12)
C1—N1—C19 132.32 (11) C13—C12—C11 121.32 (13)
C15—N1—C19 116.86 (11) C13—C12—H12 119.3
C15—N2—C14 109.90 (11) C11—C12—H12 119.3
C15—N2—C16 122.09 (12) C14—C13—C12 117.55 (13)
C14—N2—C16 128.00 (12) C14—C13—H13 121.2
N1—C1—C2 134.84 (12) C12—C13—H13 121.2
N1—C1—C14 106.28 (11) C13—C14—N2 129.39 (13)
C2—C1—C14 118.87 (12) C13—C14—C1 123.19 (13)
C1—C2—C11 117.30 (12) N2—C14—C1 107.40 (12)
C1—C2—C3 123.31 (12) O3—C15—N2 126.33 (14)
C11—C2—C3 119.10 (12) O3—C15—N1 126.71 (14)
O1—C3—C2 122.25 (13) N2—C15—N1 106.95 (12)
O1—C3—C4 119.32 (13) N2—C16—C17 112.01 (13)
C2—C3—C4 118.31 (12) N2—C16—H16A 109.2
C9—C4—C5 119.78 (14) C17—C16—H16A 109.2
C9—C4—C3 121.35 (13) N2—C16—H16B 109.2
C5—C4—C3 118.81 (14) C17—C16—H16B 109.2
C6—C5—C4 119.96 (17) H16A—C16—H16B 107.9
C6—C5—H5 120.0 C18—C17—C16 125.0 (2)
C4—C5—H5 120.0 C18—C17—H17 117.5
C7—C6—C5 120.24 (17) C16—C17—H17 117.5
C7—C6—H6 119.9 C17—C18—H18A 120.0
C5—C6—H6 119.9 C17—C18—H18B 120.0
C6—C7—C8 120.54 (16) H18A—C18—H18B 120.0
C6—C7—H7 119.7 N1—C19—C20 113.92 (13)
C8—C7—H7 119.7 N1—C19—H19A 108.8
C7—C8—C9 119.83 (18) C20—C19—H19A 108.8
C7—C8—H8 120.1 N1—C19—H19B 108.8
C9—C8—H8 120.1 C20—C19—H19B 108.8
C4—C9—C8 119.64 (15) H19A—C19—H19B 107.7
C4—C9—C10 120.54 (13) C21—C20—C19 122.60 (17)
C8—C9—C10 119.81 (15) C21—C20—H20 118.7
O2—C10—C9 120.76 (13) C19—C20—H20 118.7
O2—C10—C11 121.17 (14) C20—C21—H21A 120.0
C9—C10—C11 118.07 (13) C20—C21—H21B 120.0
C12—C11—C2 121.62 (13) H21A—C21—H21B 120.0
C12—C11—C10 116.87 (13)
C15—N1—C1—C2 178.83 (15) C1—C2—C11—C10 −177.23 (12)
C19—N1—C1—C2 −15.3 (3) C3—C2—C11—C10 8.7 (2)
C15—N1—C1—C14 −0.69 (16) O2—C10—C11—C12 −1.9 (2)
C19—N1—C1—C14 165.13 (14) C9—C10—C11—C12 179.00 (13)
N1—C1—C2—C11 176.13 (15) O2—C10—C11—C2 178.30 (14)
C14—C1—C2—C11 −4.39 (18) C9—C10—C11—C2 −0.8 (2)
N1—C1—C2—C3 −10.1 (2) C2—C11—C12—C13 0.1 (2)
C14—C1—C2—C3 169.38 (12) C10—C11—C12—C13 −179.75 (14)
C1—C2—C3—O1 −10.6 (2) C11—C12—C13—C14 −1.6 (2)
C11—C2—C3—O1 163.09 (14) C12—C13—C14—N2 −178.38 (14)
C1—C2—C3—C4 173.42 (12) C12—C13—C14—C1 −0.1 (2)
C11—C2—C3—C4 −12.91 (19) C15—N2—C14—C13 176.95 (15)
O1—C3—C4—C9 −166.55 (14) C16—N2—C14—C13 −3.9 (3)
C2—C3—C4—C9 9.6 (2) C15—N2—C14—C1 −1.58 (16)
O1—C3—C4—C5 10.9 (2) C16—N2—C14—C1 177.55 (14)
C2—C3—C4—C5 −172.99 (13) N1—C1—C14—C13 −177.27 (13)
C9—C4—C5—C6 0.0 (2) C2—C1—C14—C13 3.1 (2)
C3—C4—C5—C6 −177.51 (15) N1—C1—C14—N2 1.38 (15)
C4—C5—C6—C7 0.4 (3) C2—C1—C14—N2 −178.24 (12)
C5—C6—C7—C8 −0.5 (3) C14—N2—C15—O3 −177.54 (17)
C6—C7—C8—C9 0.3 (3) C16—N2—C15—O3 3.3 (3)
C5—C4—C9—C8 −0.2 (2) C14—N2—C15—N1 1.15 (17)
C3—C4—C9—C8 177.27 (14) C16—N2—C15—N1 −178.04 (13)
C5—C4—C9—C10 −179.13 (14) C1—N1—C15—O3 178.43 (16)
C3—C4—C9—C10 −1.7 (2) C19—N1—C15—O3 10.1 (3)
C7—C8—C9—C4 0.0 (2) C1—N1—C15—N2 −0.26 (18)
C7—C8—C9—C10 178.99 (15) C19—N1—C15—N2 −168.54 (12)
C4—C9—C10—O2 178.08 (14) C15—N2—C16—C17 76.63 (19)
C8—C9—C10—O2 −0.9 (2) C14—N2—C16—C17 −102.40 (18)
C4—C9—C10—C11 −2.8 (2) N2—C16—C17—C18 116.73 (19)
C8—C9—C10—C11 178.24 (14) C1—N1—C19—C20 109.60 (18)
C1—C2—C11—C12 2.9 (2) C15—N1—C19—C20 −85.41 (17)
C3—C2—C11—C12 −171.10 (13) N1—C19—C20—C21 126.87 (17)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C13—H13···O3i 0.93 2.49 3.406 (2) 168
C16—H16B···O3i 0.97 2.42 3.362 (2) 165

Symmetry codes: (i) −x+1, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CI5112).

References

  1. Barbour, L. J. (2001). J. Supramol. Chem.1, 189–191.
  2. Bruker (2008). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Guimarães, T. T., Da Silva Júnior, E. N., Carvalho, C. E. M., De Simone, C. A. & Pinto, A. V. (2009). Acta Cryst. E65, o1063. [DOI] [PMC free article] [PubMed]
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  5. Westrip, S. P. (2010). J. Appl. Cryst.43 Submitted.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810024748/ci5112sup1.cif

e-66-o1851-sup1.cif (19.7KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810024748/ci5112Isup2.hkl

e-66-o1851-Isup2.hkl (235.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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