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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Jul 17;66(Pt 8):o2042. doi: 10.1107/S1600536810027443

4-[(2′-Cyano­biphenyl-4-yl)methyl]­morpholin-4-ium nitrate

Weiwei SiMa a,*
PMCID: PMC3007199  PMID: 21588350

Abstract

The title ion pair, C18H19N2O+·NO3 , features an N—H⋯O hydrogen bond linking the cation to the anion. The morpholine portion adopts a chair conformation; the aromatic rings of the biphenyl­ene portion are twisted [torsion angles for the four atoms involving the ar­yl–aryl bond = 35.1 (2)–40.4 (2)°].

Related literature

For the synthesis, see: Li et al. (2008); Zhang et al. (2009).graphic file with name e-66-o2042-scheme1.jpg

Experimental

Crystal data

  • C18H19N2O+·NO3

  • M r = 341.36

  • Monoclinic, Inline graphic

  • a = 12.670 (6) Å

  • b = 13.120 (5) Å

  • c = 10.865 (5) Å

  • β = 110.927 (8)°

  • V = 1687.0 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.20 × 0.20 × 0.20 mm

Data collection

  • Rigaku SCXmini diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.981, T max = 0.981

  • 18242 measured reflections

  • 3852 independent reflections

  • 2848 reflections with I > 2σ(I)

  • R int = 0.052

Refinement

  • R[F 2 > 2σ(F 2)] = 0.062

  • wR(F 2) = 0.178

  • S = 1.17

  • 3852 reflections

  • 226 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.24 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810027443/ng2795sup1.cif

e-66-o2042-sup1.cif (19.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810027443/ng2795Isup2.hkl

e-66-o2042-Isup2.hkl (188.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H2A⋯O2 0.91 1.88 2.784 (2) 172

Acknowledgments

The author acknowledges the starter fund of Southeast University for the purchase of the X-ray diffractometer.

supplementary crystallographic information

Comment

As a continuation of our study of dielectric-ferroelectric materials, including organic ligands (Li et al., 2008), metal-organic coordination compounds (Zhang et al., 2009), organic-inorganic hybrids, we are interested in the dielectric properties (capacitance and dielectric loss measurements) of the title compound(I), unfortunately, there was no distinct anomaly observed from 93 K to 350 K. In thisarticle, the crystal structure of (I) has been presented.

The asymmetric unit of the title compound consists of one 4'-morpholinemethylbiphenyl-2-carbonitrile cation and one nitrate e-66-o2042-fig1). The intermolecular N—H···O, N—H···N hydrogen bonds link the cations and anions to chains along be-66-o2042-fig2), and make great contribution to the stability of the structure.The title compound crystallizes in the monoclinic system, space groupP21/c.

Experimental

4'-morpholinemethylbiphenyl-2-carbonitrile (10 mmol)was dissolved in 10 ml e thanol, to which nitrate acid(10 mmol) was added dropwise under stirring, the reaction solution was stirred for a few minutes.water was added untill all suspended substrates disappeared. Colorless crystals suitable for X-ray analysis were formed after several days by slow evaporation of the solvent at room temperature.

Refinement

Positional parameters of all the H atoms were calculated geometrically and were allowed to ride on the C, N atoms to which they are bonded, with C—H =0.93 to 0.97 Å, Uiso(H) = 1.2 Ueq(C), N—H = 0.91 Å, Uiso(H)= 1.5 Ueq(N).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with the atomic numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

A view of the packing of the title compound, stacking along the b axis. Dashed lines indicate hydrogen bonds.

Crystal data

C18H19N2O+·NO3 F(000) = 720
Mr = 341.36 Dx = 1.344 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3727 reflections
a = 12.670 (6) Å θ = 2.3–27.5°
b = 13.120 (5) Å µ = 0.10 mm1
c = 10.865 (5) Å T = 293 K
β = 110.927 (8)° Prism, colourless
V = 1687.0 (12) Å3 0.20 × 0.20 × 0.20 mm
Z = 4

Data collection

Rigaku SCXmini diffractometer 3852 independent reflections
Radiation source: fine-focus sealed tube 2848 reflections with I > 2σ(I)
graphite Rint = 0.052
Detector resolution: 13.6612 pixels mm-1 θmax = 27.5°, θmin = 1.7°
ω scans h = −16→16
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) k = −17→17
Tmin = 0.981, Tmax = 0.981 l = −14→14
18242 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.178 H-atom parameters constrained
S = 1.17 w = 1/[σ2(Fo2) + (0.0839P)2 + 0.0408P] where P = (Fo2 + 2Fc2)/3
3852 reflections (Δ/σ)max < 0.001
226 parameters Δρmax = 0.24 e Å3
0 restraints Δρmin = −0.24 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
N2 0.45201 (13) 0.21560 (12) 0.92144 (15) 0.0332 (4)
H2A 0.4862 0.2716 0.9032 0.040*
O1 0.63116 (14) 0.06839 (12) 0.98832 (15) 0.0521 (5)
C5 0.12498 (16) 0.35987 (15) 0.5246 (2) 0.0358 (5)
C6 0.12785 (18) 0.25575 (16) 0.5517 (2) 0.0417 (5)
H6A 0.0840 0.2110 0.4873 0.050*
C7 0.45639 (18) 0.13253 (16) 0.8303 (2) 0.0392 (5)
H7A 0.4217 0.1556 0.7399 0.047*
H7B 0.4140 0.0742 0.8423 0.047*
C9 0.26229 (17) 0.28322 (17) 0.7722 (2) 0.0393 (5)
C10 0.51627 (19) 0.18427 (17) 1.06051 (19) 0.0430 (5)
H10A 0.4767 0.1291 1.0849 0.052*
H10B 0.5206 0.2412 1.1190 0.052*
C11 0.19283 (18) 0.42418 (16) 0.6230 (2) 0.0419 (5)
H11A 0.1930 0.4937 0.6065 0.050*
C12 0.26004 (18) 0.38675 (17) 0.7450 (2) 0.0441 (5)
H12A 0.3041 0.4314 0.8093 0.053*
C13 0.05740 (17) 0.40207 (15) 0.3931 (2) 0.0371 (5)
C15 0.5770 (2) 0.10142 (19) 0.8560 (2) 0.0485 (6)
H15A 0.5782 0.0467 0.7964 0.058*
H15B 0.6181 0.1588 0.8389 0.058*
C16 −0.05099 (18) 0.36520 (16) 0.3153 (2) 0.0416 (5)
C17 0.19541 (18) 0.21840 (17) 0.6737 (2) 0.0447 (5)
H17A 0.1961 0.1488 0.6901 0.054*
C18 0.33288 (18) 0.24421 (19) 0.9069 (2) 0.0459 (6)
H18A 0.2960 0.1849 0.9265 0.055*
H18B 0.3359 0.2962 0.9716 0.055*
C19 0.1012 (2) 0.47979 (17) 0.3390 (2) 0.0482 (6)
H19A 0.1713 0.5072 0.3883 0.058*
C20 −0.1077 (2) 0.40316 (19) 0.1893 (2) 0.0533 (6)
H20A −0.1783 0.3774 0.1390 0.064*
C21 0.63421 (19) 0.14995 (18) 1.0763 (2) 0.0494 (6)
H21A 0.6758 0.2068 1.0588 0.059*
H21B 0.6734 0.1278 1.1663 0.059*
C22 0.0438 (2) 0.5178 (2) 0.2140 (3) 0.0586 (7)
H22A 0.0755 0.5701 0.1807 0.070*
C23 −0.11159 (19) 0.29425 (19) 0.3668 (2) 0.0513 (6)
N1 −0.1659 (2) 0.2409 (2) 0.4032 (3) 0.0747 (7)
C25 −0.0596 (2) 0.4786 (2) 0.1392 (3) 0.0606 (7)
H25A −0.0972 0.5031 0.0545 0.073*
O2 0.54586 (15) 0.38211 (13) 0.83891 (15) 0.0550 (5)
N3 0.60177 (17) 0.43391 (14) 0.93873 (18) 0.0465 (5)
O4 0.60072 (17) 0.40818 (14) 1.04806 (16) 0.0646 (5)
O3 0.65691 (17) 0.50803 (15) 0.92616 (18) 0.0771 (6)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
N2 0.0332 (9) 0.0350 (9) 0.0292 (9) −0.0012 (7) 0.0086 (7) 0.0015 (7)
O1 0.0519 (10) 0.0499 (10) 0.0448 (9) 0.0160 (7) 0.0054 (8) 0.0012 (7)
C5 0.0265 (9) 0.0401 (11) 0.0396 (11) 0.0025 (8) 0.0102 (8) −0.0027 (9)
C6 0.0344 (11) 0.0383 (12) 0.0457 (12) −0.0037 (9) 0.0063 (9) −0.0019 (9)
C7 0.0430 (12) 0.0375 (11) 0.0322 (11) −0.0007 (9) 0.0075 (9) −0.0028 (8)
C9 0.0290 (10) 0.0500 (12) 0.0385 (12) 0.0021 (9) 0.0115 (9) 0.0009 (9)
C10 0.0486 (13) 0.0479 (13) 0.0275 (10) 0.0041 (10) 0.0073 (9) 0.0029 (9)
C11 0.0402 (11) 0.0350 (11) 0.0454 (12) 0.0045 (9) 0.0089 (10) −0.0062 (9)
C12 0.0394 (11) 0.0441 (12) 0.0418 (12) 0.0035 (9) 0.0059 (10) −0.0089 (9)
C13 0.0327 (10) 0.0347 (11) 0.0406 (11) 0.0066 (8) 0.0092 (9) −0.0026 (9)
C15 0.0489 (13) 0.0535 (14) 0.0397 (12) 0.0093 (11) 0.0116 (11) −0.0016 (10)
C16 0.0348 (11) 0.0423 (12) 0.0436 (12) 0.0057 (9) 0.0089 (10) −0.0037 (9)
C17 0.0367 (11) 0.0400 (12) 0.0508 (13) −0.0032 (9) 0.0077 (10) 0.0064 (10)
C18 0.0361 (11) 0.0621 (15) 0.0405 (12) 0.0040 (10) 0.0149 (10) 0.0049 (10)
C19 0.0422 (12) 0.0469 (13) 0.0503 (14) 0.0010 (10) 0.0102 (11) 0.0017 (10)
C20 0.0441 (13) 0.0616 (16) 0.0428 (13) 0.0069 (11) 0.0015 (11) −0.0046 (11)
C21 0.0446 (13) 0.0540 (14) 0.0388 (12) 0.0050 (10) 0.0018 (10) −0.0002 (10)
C22 0.0632 (16) 0.0534 (15) 0.0562 (15) 0.0029 (12) 0.0178 (13) 0.0099 (12)
C23 0.0306 (11) 0.0584 (15) 0.0557 (15) 0.0016 (10) 0.0043 (11) −0.0023 (12)
N1 0.0444 (13) 0.0834 (18) 0.0884 (18) −0.0072 (12) 0.0139 (13) 0.0157 (14)
C25 0.0644 (17) 0.0659 (17) 0.0423 (13) 0.0150 (13) 0.0075 (12) 0.0088 (12)
O2 0.0617 (11) 0.0570 (10) 0.0381 (9) −0.0137 (8) 0.0075 (8) −0.0069 (7)
N3 0.0480 (11) 0.0412 (11) 0.0392 (11) −0.0038 (8) 0.0022 (9) 0.0047 (8)
O4 0.0876 (14) 0.0602 (11) 0.0383 (9) −0.0121 (9) 0.0129 (9) 0.0019 (8)
O3 0.0796 (14) 0.0641 (12) 0.0676 (13) −0.0319 (10) 0.0018 (11) 0.0168 (10)

Geometric parameters (Å, °)

N2—C7 1.487 (3) C13—C19 1.388 (3)
N2—C10 1.495 (3) C13—C16 1.416 (3)
N2—C18 1.508 (3) C15—H15A 0.9700
N2—H2A 0.9100 C15—H15B 0.9700
O1—C15 1.422 (3) C16—C20 1.391 (3)
O1—C21 1.426 (3) C16—C23 1.441 (3)
C5—C11 1.392 (3) C17—H17A 0.9300
C5—C6 1.395 (3) C18—H18A 0.9700
C5—C13 1.485 (3) C18—H18B 0.9700
C6—C17 1.386 (3) C19—C22 1.384 (3)
C6—H6A 0.9300 C19—H19A 0.9300
C7—C15 1.508 (3) C20—C25 1.372 (4)
C7—H7A 0.9700 C20—H20A 0.9300
C7—H7B 0.9700 C21—H21A 0.9700
C9—C12 1.388 (3) C21—H21B 0.9700
C9—C17 1.392 (3) C22—C25 1.372 (4)
C9—C18 1.506 (3) C22—H22A 0.9300
C10—C21 1.511 (3) C23—N1 1.146 (3)
C10—H10A 0.9700 C25—H25A 0.9300
C10—H10B 0.9700 O2—N3 1.261 (2)
C11—C12 1.384 (3) N3—O3 1.233 (2)
C11—H11A 0.9300 N3—O4 1.240 (2)
C12—H12A 0.9300
C7—N2—C10 109.59 (16) C7—C15—H15A 109.4
C7—N2—C18 112.76 (16) O1—C15—H15B 109.4
C10—N2—C18 109.72 (16) C7—C15—H15B 109.4
C7—N2—H2A 108.2 H15A—C15—H15B 108.0
C10—N2—H2A 108.2 C20—C16—C13 121.0 (2)
C18—N2—H2A 108.2 C20—C16—C23 117.0 (2)
C15—O1—C21 109.68 (17) C13—C16—C23 121.7 (2)
C11—C5—C6 117.98 (19) C6—C17—C9 121.2 (2)
C11—C5—C13 119.90 (19) C6—C17—H17A 119.4
C6—C5—C13 122.03 (19) C9—C17—H17A 119.4
C17—C6—C5 120.6 (2) C9—C18—N2 114.26 (17)
C17—C6—H6A 119.7 C9—C18—H18A 108.7
C5—C6—H6A 119.7 N2—C18—H18A 108.7
N2—C7—C15 110.57 (17) C9—C18—H18B 108.7
N2—C7—H7A 109.5 N2—C18—H18B 108.7
C15—C7—H7A 109.5 H18A—C18—H18B 107.6
N2—C7—H7B 109.5 C22—C19—C13 122.1 (2)
C15—C7—H7B 109.5 C22—C19—H19A 119.0
H7A—C7—H7B 108.1 C13—C19—H19A 119.0
C12—C9—C17 118.2 (2) C25—C20—C16 120.1 (2)
C12—C9—C18 120.0 (2) C25—C20—H20A 119.9
C17—C9—C18 121.8 (2) C16—C20—H20A 119.9
N2—C10—C21 110.85 (18) O1—C21—C10 111.03 (18)
N2—C10—H10A 109.5 O1—C21—H21A 109.4
C21—C10—H10A 109.5 C10—C21—H21A 109.4
N2—C10—H10B 109.5 O1—C21—H21B 109.4
C21—C10—H10B 109.5 C10—C21—H21B 109.4
H10A—C10—H10B 108.1 H21A—C21—H21B 108.0
C12—C11—C5 121.4 (2) C25—C22—C19 120.1 (3)
C12—C11—H11A 119.3 C25—C22—H22A 120.0
C5—C11—H11A 119.3 C19—C22—H22A 120.0
C11—C12—C9 120.7 (2) N1—C23—C16 175.7 (3)
C11—C12—H12A 119.7 C20—C25—C22 120.1 (2)
C9—C12—H12A 119.7 C20—C25—H25A 120.0
C19—C13—C16 116.55 (19) C22—C25—H25A 120.0
C19—C13—C5 120.05 (19) O3—N3—O4 121.4 (2)
C16—C13—C5 123.37 (19) O3—N3—O2 119.7 (2)
O1—C15—C7 111.16 (18) O4—N3—O2 118.84 (19)
O1—C15—H15A 109.4
C11—C5—C6—C17 0.8 (3) C5—C13—C16—C23 9.9 (3)
C13—C5—C6—C17 177.3 (2) C5—C6—C17—C9 −0.2 (3)
C10—N2—C7—C15 −53.1 (2) C12—C9—C17—C6 −0.3 (3)
C18—N2—C7—C15 −175.65 (17) C18—C9—C17—C6 177.73 (19)
C7—N2—C10—C21 52.7 (2) C12—C9—C18—N2 −90.3 (3)
C18—N2—C10—C21 177.06 (18) C17—C9—C18—N2 91.7 (3)
C6—C5—C11—C12 −0.9 (3) C7—N2—C18—C9 −61.1 (2)
C13—C5—C11—C12 −177.56 (19) C10—N2—C18—C9 176.48 (18)
C5—C11—C12—C9 0.5 (3) C16—C13—C19—C22 −1.7 (3)
C17—C9—C12—C11 0.1 (3) C5—C13—C19—C22 176.6 (2)
C18—C9—C12—C11 −177.9 (2) C13—C16—C20—C25 −1.0 (3)
C11—C5—C13—C19 36.9 (3) C23—C16—C20—C25 173.4 (2)
C6—C5—C13—C19 −139.6 (2) C15—O1—C21—C10 60.9 (2)
C11—C5—C13—C16 −144.9 (2) N2—C10—C21—O1 −57.1 (2)
C6—C5—C13—C16 38.6 (3) C13—C19—C22—C25 −0.1 (4)
C21—O1—C15—C7 −61.6 (2) C20—C16—C23—N1 −30 (4)
N2—C7—C15—O1 58.4 (2) C13—C16—C23—N1 144 (4)
C19—C13—C16—C20 2.3 (3) C16—C20—C25—C22 −1.0 (4)
C5—C13—C16—C20 −176.0 (2) C19—C22—C25—C20 1.5 (4)
C19—C13—C16—C23 −171.9 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N2—H2A···O2 0.91 1.88 2.784 (2) 172
N2—H2A···O4 0.91 2.48 3.158 (3) 131
N2—H2A···N3 0.91 2.53 3.404 (3) 160

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NG2795).

References

  1. Li, X. Z., Qu, Z. R. & Xiong, R. G. (2008). Chin. J. Chem.11, 1959–1962.
  2. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
  3. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  4. Zhang, W., Chen, L. Z., Xiong, R. G., Nakamura, T. & Huang, S. D. (2009). J. Am. Chem. Soc.131, 12544–12545. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810027443/ng2795sup1.cif

e-66-o2042-sup1.cif (19.5KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810027443/ng2795Isup2.hkl

e-66-o2042-Isup2.hkl (188.8KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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