Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Jul 31;66(Pt 8):o2137. doi: 10.1107/S1600536810029338

Phosmet: O,O-dimethyl S-phthalimidomethyl phospho­rodithio­ate

Sanghun Cheon a, Hojin Yang a, Ki-Min Park a,*, Tae Ho Kim a, Jineun Kim a,*
PMCID: PMC3007410  PMID: 21588425

Abstract

In the title compound, C11H12NO4PS2, the dihedral angle between the phthalimidyl ring plane and the PS2 plane of the phospho­rodithio­ate group is 60.41 (3)°. In the crystal structure, weak inter­molecular C—H⋯O hydrogen bonds and S⋯S inter­actions [3.3825 (9) Å] contribute to the stabilization of the packing.

Related literature

For information on the toxicity and insecticidal properties of the title compound, see: Song et al. (2009). For related structures, see: Baughman & Allen (1995); Rohrbaugh et al. (1976). For the synthesis, see: Sinderhauf & Schwack (2004).graphic file with name e-66-o2137-scheme1.jpg

Experimental

Crystal data

  • C11H12NO4PS2

  • M r = 317.31

  • Triclinic, Inline graphic

  • a = 8.3428 (18) Å

  • b = 8.6014 (19) Å

  • c = 10.218 (2) Å

  • α = 85.253 (10)°

  • β = 81.478 (10)°

  • γ = 83.961 (9)°

  • V = 719.4 (3) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.49 mm−1

  • T = 173 K

  • 0.29 × 0.25 × 0.15 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996) T min = 0.871, T max = 0.930

  • 13076 measured reflections

  • 3613 independent reflections

  • 3404 reflections with I > 2σ(I)

  • R int = 0.025

Refinement

  • R[F 2 > 2σ(F 2)] = 0.031

  • wR(F 2) = 0.095

  • S = 1.04

  • 3613 reflections

  • 174 parameters

  • H-atom parameters constrained

  • Δρmax = 0.34 e Å−3

  • Δρmin = −0.44 e Å−3

Data collection: APEX2 (Bruker, 2006); cell refinement: SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810029338/jh2189sup1.cif

e-66-o2137-sup1.cif (18KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810029338/jh2189Isup2.hkl

e-66-o2137-Isup2.hkl (177.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C2—H2B⋯O3i 0.98 2.57 3.272 (2) 128
C2—H2C⋯O4ii 0.98 2.70 3.420 (2) 130

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This research was supported by the Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology (No. 2010–0016386).

supplementary crystallographic information

Comment

Phosmet (systematic name: O,O-dimethyl S-phthalimidomethyl phosphorodithioate), is a well known organothiophosphate acaricides and isoindole organothiophosphate insecticides used on plants and animals (Song et al., 2009). However, it's crystal structure has not been reported yet.

In the title compound (Scheme 1, Fig.1), the dihedral angle between the phthalimidyl ring plane and the S1/P1/S2 plane of phosphorodithioate group is 60.41 (3)°. All bond lengths and bond angles of phosphorodithioate group are are comparable to those observed in similar structures (Baughman & Allen, 1995; Rohrbaugh et al., 1976).

In the crystal structure, as shown in Fig. 2, weak C—H···O hydrogen bonds are observed [C2—H2B···O3; H2B···O3 = 2.57 Å; C2—H2B···O3 = 128°; C2···O3 = 3.272 (2) Å; -x + 1, -y + 1, -z and C2—H2C···O4; H2C···O4 = 2.70 Å; C2—H2C···O4 = 130°; C2···O4 = 3.420 (2) Å; -x + 1, -y + 1, -z + 1]. Weak intermolecular S···S interactions with 3.3825 (9) Å also exist. These intermolecular interactions may be contribute to the stabilization of the packing.

Experimental

The title compound was purchased from the Dr. Ehrenstorfer GmbH Company. Slow evaporation of a CH2Cl2 solution gave single crystals suitable for X-ray analysis.

Refinement

All H-atoms were positioned geometrically and refined using a riding model with d(C—H) = 0.95 Å, Uiso = 1.2Ueq(C) for aromatic and 0.98 Å, Uiso = 1.5Ueq(C) for the d(C—H) = 0.98 Å, Uiso = 1.5Ueq(C) for CH3 groups.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, showing displacement ellipsoids drawn at the 50% probability level.

Fig. 2.

Fig. 2.

Crystal packing of the title compound with intermolecular C—H···O and S···S interactions shown as dashed lines. H atoms not involved in intermolecular interactions have been omitted for clarity. (Symmetry codes: i) -x + 1, -y, -z + 1; ii) -x + 1, -y + 1, -z; iii) -x + 1, -y + 1, -z + 1)

Crystal data

C11H12NO4PS2 Z = 2
Mr = 317.31 F(000) = 328
Triclinic, P1 Dx = 1.465 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 8.3428 (18) Å Cell parameters from 9755 reflections
b = 8.6014 (19) Å θ = 2.4–28.5°
c = 10.218 (2) Å µ = 0.49 mm1
α = 85.253 (10)° T = 173 K
β = 81.478 (10)° Block, colourless
γ = 83.961 (9)° 0.29 × 0.25 × 0.15 mm
V = 719.4 (3) Å3

Data collection

Bruker APEXII CCD diffractometer 3613 independent reflections
Radiation source: fine-focus sealed tube 3404 reflections with I > 2σ(I)
graphite Rint = 0.025
φ and ω scans θmax = 28.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −11→11
Tmin = 0.871, Tmax = 0.930 k = −11→11
13076 measured reflections l = −13→13

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095 H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0575P)2 + 0.2633P] where P = (Fo2 + 2Fc2)/3
3613 reflections (Δ/σ)max < 0.001
174 parameters Δρmax = 0.34 e Å3
0 restraints Δρmin = −0.44 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
S1 0.09888 (5) 0.15933 (5) 0.28102 (5) 0.03924 (12)
S2 0.43827 (4) 0.15124 (4) 0.39691 (3) 0.02668 (10)
P1 0.32713 (4) 0.16877 (4) 0.22735 (3) 0.02349 (10)
O1 0.41933 (14) 0.04388 (11) 0.13285 (10) 0.0328 (2)
O2 0.38169 (14) 0.31782 (11) 0.13866 (10) 0.0306 (2)
O3 0.75419 (15) 0.31462 (15) 0.07640 (10) 0.0384 (3)
O4 0.72161 (16) 0.33782 (15) 0.52567 (10) 0.0419 (3)
N1 0.71376 (14) 0.29623 (13) 0.30631 (11) 0.0258 (2)
C1 0.4028 (2) −0.12177 (17) 0.16526 (19) 0.0450 (4)
H1A 0.4367 −0.1523 0.2523 0.067*
H1B 0.4716 −0.1830 0.0979 0.067*
H1C 0.2889 −0.1418 0.1674 0.067*
C2 0.3344 (2) 0.47159 (17) 0.18799 (18) 0.0412 (4)
H2A 0.2154 0.4890 0.2049 0.062*
H2B 0.3767 0.5518 0.1218 0.062*
H2C 0.3791 0.4780 0.2706 0.062*
C3 0.65366 (16) 0.14476 (16) 0.32840 (14) 0.0273 (3)
H3A 0.7178 0.0791 0.3900 0.033*
H3B 0.6704 0.0942 0.2432 0.033*
C4 0.76056 (16) 0.36963 (16) 0.18021 (13) 0.0271 (3)
C5 0.82125 (17) 0.51897 (16) 0.20613 (14) 0.0286 (3)
C6 0.8801 (2) 0.63735 (19) 0.11828 (17) 0.0377 (3)
H6 0.8815 0.6351 0.0253 0.045*
C7 0.9376 (2) 0.76105 (19) 0.1734 (2) 0.0453 (4)
H7 0.9779 0.8456 0.1165 0.054*
C8 0.9370 (2) 0.76272 (19) 0.3089 (2) 0.0446 (4)
H8 0.9788 0.8474 0.3428 0.053*
C9 0.8763 (2) 0.64295 (19) 0.39698 (17) 0.0380 (3)
H9 0.8758 0.6442 0.4899 0.046*
C10 0.81732 (17) 0.52298 (17) 0.34284 (14) 0.0290 (3)
C11 0.74723 (17) 0.38001 (17) 0.40935 (13) 0.0286 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
S1 0.02281 (18) 0.0388 (2) 0.0582 (3) −0.00383 (14) −0.00798 (16) −0.01070 (17)
S2 0.02212 (17) 0.03314 (18) 0.02380 (16) −0.00471 (12) −0.00268 (11) 0.00543 (12)
P1 0.02404 (18) 0.01980 (16) 0.02735 (17) −0.00243 (12) −0.00559 (12) −0.00190 (12)
O1 0.0399 (6) 0.0230 (5) 0.0348 (5) −0.0046 (4) 0.0011 (4) −0.0068 (4)
O2 0.0425 (6) 0.0219 (4) 0.0278 (5) −0.0033 (4) −0.0083 (4) 0.0022 (3)
O3 0.0422 (6) 0.0503 (6) 0.0252 (5) −0.0161 (5) −0.0042 (4) −0.0026 (4)
O4 0.0488 (7) 0.0529 (7) 0.0246 (5) −0.0133 (5) −0.0027 (4) −0.0001 (5)
N1 0.0242 (5) 0.0295 (5) 0.0237 (5) −0.0068 (4) −0.0021 (4) 0.0008 (4)
C1 0.0568 (11) 0.0217 (6) 0.0540 (10) −0.0065 (7) 0.0052 (8) −0.0085 (6)
C2 0.0593 (11) 0.0198 (6) 0.0460 (9) −0.0006 (6) −0.0155 (7) −0.0001 (6)
C3 0.0209 (6) 0.0269 (6) 0.0331 (7) −0.0025 (5) −0.0031 (5) 0.0027 (5)
C4 0.0217 (6) 0.0339 (6) 0.0255 (6) −0.0062 (5) −0.0031 (5) 0.0026 (5)
C5 0.0233 (6) 0.0297 (6) 0.0321 (7) −0.0039 (5) −0.0022 (5) 0.0014 (5)
C6 0.0334 (8) 0.0370 (7) 0.0407 (8) −0.0067 (6) −0.0020 (6) 0.0080 (6)
C7 0.0356 (8) 0.0301 (7) 0.0672 (11) −0.0081 (6) 0.0004 (8) 0.0072 (7)
C8 0.0343 (8) 0.0304 (7) 0.0693 (12) −0.0063 (6) −0.0008 (7) −0.0130 (7)
C9 0.0327 (8) 0.0365 (7) 0.0456 (8) −0.0039 (6) −0.0010 (6) −0.0141 (6)
C10 0.0236 (6) 0.0296 (6) 0.0334 (7) −0.0033 (5) −0.0006 (5) −0.0042 (5)
C11 0.0249 (6) 0.0336 (7) 0.0270 (6) −0.0039 (5) −0.0016 (5) −0.0023 (5)

Geometric parameters (Å, °)

S1—P1 1.9103 (6) C2—H2B 0.9800
S2—C3 1.8261 (14) C2—H2C 0.9800
S2—P1 2.0706 (6) C3—H3A 0.9900
P1—O1 1.5671 (10) C3—H3B 0.9900
P1—O2 1.5749 (10) C4—C5 1.4864 (19)
O1—C1 1.4520 (18) C5—C6 1.381 (2)
O2—C2 1.4494 (17) C5—C10 1.396 (2)
O3—C4 1.2070 (18) C6—C7 1.402 (2)
O4—C11 1.2081 (18) C6—H6 0.9500
N1—C11 1.4003 (18) C7—C8 1.386 (3)
N1—C4 1.4069 (17) C7—H7 0.9500
N1—C3 1.4335 (17) C8—C9 1.396 (2)
C1—H1A 0.9800 C8—H8 0.9500
C1—H1B 0.9800 C9—C10 1.377 (2)
C1—H1C 0.9800 C9—H9 0.9500
C2—H2A 0.9800 C10—C11 1.4870 (19)
C3—S2—P1 102.12 (5) N1—C3—H3B 108.9
O1—P1—O2 96.75 (6) S2—C3—H3B 108.9
O1—P1—S1 118.01 (5) H3A—C3—H3B 107.7
O2—P1—S1 117.12 (5) O3—C4—N1 124.76 (13)
O1—P1—S2 107.80 (5) O3—C4—C5 129.98 (13)
O2—P1—S2 108.52 (4) N1—C4—C5 105.23 (11)
S1—P1—S2 107.86 (3) C6—C5—C10 121.80 (14)
C1—O1—P1 120.26 (10) C6—C5—C4 129.95 (14)
C2—O2—P1 119.12 (10) C10—C5—C4 108.20 (12)
C11—N1—C4 112.65 (11) C5—C6—C7 116.55 (16)
C11—N1—C3 122.77 (11) C5—C6—H6 121.7
C4—N1—C3 124.30 (12) C7—C6—H6 121.7
O1—C1—H1A 109.5 C8—C7—C6 121.44 (15)
O1—C1—H1B 109.5 C8—C7—H7 119.3
H1A—C1—H1B 109.5 C6—C7—H7 119.3
O1—C1—H1C 109.5 C7—C8—C9 121.56 (15)
H1A—C1—H1C 109.5 C7—C8—H8 119.2
H1B—C1—H1C 109.5 C9—C8—H8 119.2
O2—C2—H2A 109.5 C10—C9—C8 116.89 (16)
O2—C2—H2B 109.5 C10—C9—H9 121.6
H2A—C2—H2B 109.5 C8—C9—H9 121.6
O2—C2—H2C 109.5 C9—C10—C5 121.73 (14)
H2A—C2—H2C 109.5 C9—C10—C11 129.60 (14)
H2B—C2—H2C 109.5 C5—C10—C11 108.65 (12)
N1—C3—S2 113.49 (9) O4—C11—N1 124.50 (14)
N1—C3—H3A 108.9 O4—C11—C10 130.34 (14)
S2—C3—H3A 108.9 N1—C11—C10 105.15 (11)
C3—S2—P1—O1 46.79 (6) C10—C5—C6—C7 0.8 (2)
C3—S2—P1—O2 −56.96 (6) C4—C5—C6—C7 −176.42 (15)
C3—S2—P1—S1 175.23 (5) C5—C6—C7—C8 0.8 (3)
O2—P1—O1—C1 −176.64 (13) C6—C7—C8—C9 −1.2 (3)
S1—P1—O1—C1 −50.98 (14) C7—C8—C9—C10 0.1 (2)
S2—P1—O1—C1 71.40 (13) C8—C9—C10—C5 1.5 (2)
O1—P1—O2—C2 −176.16 (12) C8—C9—C10—C11 179.35 (15)
S1—P1—O2—C2 57.54 (12) C6—C5—C10—C9 −2.0 (2)
S2—P1—O2—C2 −64.80 (12) C4—C5—C10—C9 175.78 (14)
C11—N1—C3—S2 75.68 (15) C6—C5—C10—C11 179.78 (13)
C4—N1—C3—S2 −110.89 (13) C4—C5—C10—C11 −2.49 (16)
P1—S2—C3—N1 90.77 (10) C4—N1—C11—O4 −178.01 (14)
C11—N1—C4—O3 174.74 (14) C3—N1—C11—O4 −3.9 (2)
C3—N1—C4—O3 0.7 (2) C4—N1—C11—C10 1.89 (15)
C11—N1—C4—C5 −3.36 (15) C3—N1—C11—C10 176.00 (12)
C3—N1—C4—C5 −177.37 (12) C9—C10—C11—O4 2.3 (3)
O3—C4—C5—C6 3.1 (3) C5—C10—C11—O4 −179.63 (16)
N1—C4—C5—C6 −178.98 (15) C9—C10—C11—N1 −177.61 (15)
O3—C4—C5—C10 −174.42 (15) C5—C10—C11—N1 0.48 (15)
N1—C4—C5—C10 3.54 (15)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C2—H2B···O3i 0.98 2.57 3.272 (2) 128
C2—H2C···O4ii 0.98 2.70 3.420 (2) 130

Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1, −y+1, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: JH2189).

References

  1. Baughman, R. G. & Allen, J. L. (1995). Acta Cryst. C51, 521–523.
  2. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  3. Bruker (2006). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  4. Rohrbaugh, W. J., Meyers, E. K. & Jacobson, R. A. (1976). J. Agric. Food Chem.24, 713–717.
  5. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Sinderhauf, K. & Schwack, W. (2004). J. Label Compd. Radiopharm.47, 509–512.
  8. Song, Y., Ge, Y., Zhan, Y., Liu, B. & Lu, Y. (2009). Anal. Bioanal. Chem.393, 2001–2008. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810029338/jh2189sup1.cif

e-66-o2137-sup1.cif (18KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810029338/jh2189Isup2.hkl

e-66-o2137-Isup2.hkl (177.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES