Table 1.
Genome statistics.
| Species | F. oxysporum | F. verticillioides | F. graminearum |
|---|---|---|---|
| Strain | 4287 | 7600 | PH-1 |
| Sequence coverage (fold) | 6 | 8 | 10 |
| Genome size (Mb) | 59.9 | 41.7 | 36.2 |
| Number of chromosomes | 15 | 11* | 4 |
| Total scaffolds | 114 | 31 | 36 |
| N50 scaffold length (Mb) | 1.98 | 1.96 | 5.35 |
| Coding genes | 17,735 | 14,179 | 13,332 |
| Median gene length (bp) | 1,292 | 1,397 | 1,355 |
| Repetitive sequence (Mb) | 16.83 | 0.36 | 0.24 |
| Transposable elements (%) | 3.98 | 0.14 | 0.03 |
| NCBI accession | AAXH01000000 | AAIM02000000 | AACM00000000 |
*
Fv was reported to contain 12 chromosomes7, 11 chromosomes were mapped to the assembled genome, and no genetic markers from the smallest chromosome (600 kb or less) were found in the sequence data. N50 represents the size N such that 50% of the nucleotides is contained in scaffolds of size N or greater.