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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 18;67(Pt 1):o154. doi: 10.1107/S1600536810052232

3-{[5-(4-Bromo­phen­yl)imidazo[2,1-b][1,3,4]thia­diazol-2-yl]meth­yl}-1,2-benzoxazole

Afshan Banu a, Mohamed Ziaulla a, Noor Shahina Begum a,*, Ravi S Lamani b, I M Khazi b
PMCID: PMC3050133  PMID: 21522661

Abstract

In the title compound, C18H11BrN4OS, the imidazothia­diazole and benzisoxazole rings are individually planar with maximum deviations of 0.025 (3) 0.015 (4) Å, respectively, and are inclined at an angle of 23.51 (7)° with respect to each other. The planes of the imidazothia­diazole and bromo­phenyl rings are inclined at an angle of 27.34 (3)°. In the crystal, inter­molecular C—H⋯N inter­actions result in chains of mol­ecules along the b and c axes. Moreover, C—H⋯O inter­actions result in centrosymmetric head-to-head dimers with R 2 2(24) graph-set motifs. The mol­ecular packing is further stabilized by π–π stacking inter­actions between the imidazole rings with a shortest centroid–centroid distance of 3.492 (3) Å. In addition, C—H⋯π inter­actions are observed in the crystal structure.

Related literature

For the biological activity of benzisoxazole derivatives, see: Priya et al. (2005 ▶). For the preparation of the title compound, see: Lamani et al. (2009 ▶). For a related structure, see: Sun & Zhang (2009 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).graphic file with name e-67-0o154-scheme1.jpg

Experimental

Crystal data

  • C18H11BrN4OS

  • M r = 411.28

  • Monoclinic, Inline graphic

  • a = 38.985 (17) Å

  • b = 5.764 (3) Å

  • c = 14.925 (6) Å

  • β = 109.191 (13)°

  • V = 3167 (2) Å3

  • Z = 8

  • Mo Kα radiation

  • μ = 2.74 mm−1

  • T = 423 K

  • 0.18 × 0.16 × 0.16 mm

Data collection

  • Bruker SMART APEX CCD detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.638, T max = 0.668

  • 8879 measured reflections

  • 3432 independent reflections

  • 2534 reflections with I > 2σ(I)

  • R int = 0.081

Refinement

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.142

  • S = 1.02

  • 3432 reflections

  • 226 parameters

  • H-atom parameters constrained

  • Δρmax = 1.10 e Å−3

  • Δρmin = −1.02 e Å−3

Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT-Plus (Bruker, 1998 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1996) ▶; software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810052232/pv2359sup1.cif

e-67-0o154-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052232/pv2359Isup2.hkl

e-67-0o154-Isup2.hkl (165KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

Cg4 and Cg5 are the centroids of the C1–C6 and C13–C18 rings, respectively.

D—H⋯A D—H H⋯A D⋯A D—H⋯A
C2—H2⋯O1i 0.93 2.38 3.219 (6) 150
C8—H8⋯N1ii 0.93 2.60 3.469 (6) 156
C11—H11B⋯N1iii 0.97 2.48 3.358 (6) 150
C4—H4⋯Cg5iii 0.93 2.96 3.554 (5) 123
C18—H18⋯Cg4iii 0.93 2.83 3.496 (5) 130

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic.

Acknowledgments

NSB is thankful to the University Grants Commission (UGC), India, for financial assistance and the Department of Science and Technology, (DST), India, for the data collection facility under the IRHPA–DST program.

supplementary crystallographic information

Comment

Benzisoxazole derivatives are known to possess important biological activities (Priya et al., 2005). In view of increasing importance of the heterocycles in pharmaceutical and biological fields, it was considered of interest to synthesize some new chemical entities incorporating two active pharmacophores in a single molecular frame work and to evaluate their biological activities. In the title compound (Fig. 1), the fused imidazothiadiazole ring system is linked to a benzisoxazole and a bromophenyl moieties. The imidazothiadiazole (S1/N1–N3/C7–C10) and benzisoxazole (O1/N4/C12–C18) rings are individually planar similar to those reported earlier (Sun & Zhang, 2009) with maximum deviations 0.025 (3) Å for N2 and 0.015 (4) Å for C17, respectively. The mean-plane of benzisoxazole makes a dihedral angle of 23.51 (7)° with the mean-plane of the imidazothiadiazole ring. The planes of the imidazothiadiazole and bromophenyl rings are inclined at an angle 27.34 (3)° with each other. The differences in bond lengths S1—C9 (1.734 (5) Å) and S1—C10 (1.757 (5) Å) indicate that the resonance effect caused by the imidazole ring is stronger than that caused by the thiadiazole ring. In the crystal structure, intermolecular interactions C8—H8···N1 result in chains of molecules along the c-axis and C11—H11B···N1 interactions result in chains of molecules along the b-axis. Moreover, C2—H2···O1 interactions result in centrosymmetric head-to-head dimers corresponding to R22(24) graph set motif (Bernstein et al., 1995) (Fig. 2). The molecular packing is further stabilized by π-π stacking interactions between imidazo rings (Cg3) with the shortest centroid–centroid distance 3.492 (3) Å. In addition, π-ring interactions of the type C—H···Cg (Cg being the centroids of rings C1–C6 and C13–C18) are also observed in the crystal structure; details have been provided in Table 1.

Experimental

The title compound was synthesized by following the procedure reported earlier (Lamani et al., 2009) and suitable crystals for X-ray crystallographic analysis were grown from a solution of dimethylformamide by slow evaporation at room temperature.

Refinement

The H atoms were placed at calculated positions in the riding model approximation with N—H = 0.86 and C—H = 0.97 Å, and Uiso(H) = 1.2Ueq(N/C).

Figures

Fig. 1.

Fig. 1.

ORTEP (Farrugia, 1997) view of the title compound, showing 50% probability ellipsoids and the atom numbering scheme.

Fig. 2.

Fig. 2.

A unit cell packing of the title compound showing intermolecular interactions with dotted lines. H-atoms not involved in hydrogen bonding have been excluded.

Crystal data

C18H11BrN4OS F(000) = 1648
Mr = 411.28 Dx = 1.725 Mg m−3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 3432 reflections
a = 38.985 (17) Å θ = 2.2–27.0°
b = 5.764 (3) Å µ = 2.74 mm−1
c = 14.925 (6) Å T = 423 K
β = 109.191 (13)° Block, yellow
V = 3167 (2) Å3 0.18 × 0.16 × 0.16 mm
Z = 8

Data collection

Bruker SMART APEX CCD detector diffractometer 3432 independent reflections
Radiation source: Enhance (Mo) X-ray Source 2534 reflections with I > 2σ(I)
graphite Rint = 0.081
ω scans θmax = 27.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 1998) h = −44→49
Tmin = 0.638, Tmax = 0.668 k = −7→7
8879 measured reflections l = −16→19

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142 H-atom parameters constrained
S = 1.02 w = 1/[σ2(Fo2) + (0.0787P)2] where P = (Fo2 + 2Fc2)/3
3432 reflections (Δ/σ)max < 0.001
226 parameters Δρmax = 1.10 e Å−3
0 restraints Δρmin = −1.02 e Å−3

Special details

Experimental. The compound was synthesized by following the procedure given in Lamani et al., (2009)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.14779 (11) 0.5054 (7) 0.4239 (3) 0.0178 (8)
H1 0.1636 0.3813 0.4453 0.021*
C2 0.11246 (11) 0.4910 (8) 0.4268 (3) 0.0213 (9)
H2 0.1048 0.3593 0.4507 0.026*
C3 0.08923 (11) 0.6744 (7) 0.3938 (3) 0.0193 (9)
C4 0.10031 (12) 0.8734 (7) 0.3593 (3) 0.0222 (9)
H4 0.0844 0.9972 0.3382 0.027*
C5 0.13517 (11) 0.8857 (7) 0.3567 (3) 0.0200 (9)
H5 0.1426 1.0183 0.3327 0.024*
C6 0.15970 (11) 0.7034 (7) 0.3892 (3) 0.0163 (8)
C7 0.19675 (11) 0.7159 (7) 0.3855 (3) 0.0165 (8)
C8 0.21618 (11) 0.9130 (7) 0.3817 (3) 0.0175 (8)
H8 0.2091 1.0667 0.3831 0.021*
C9 0.24700 (11) 0.5928 (7) 0.3759 (3) 0.0166 (8)
C10 0.30080 (11) 0.7731 (7) 0.3592 (3) 0.0178 (8)
C11 0.33397 (10) 0.8402 (7) 0.3361 (3) 0.0168 (8)
H11A 0.3421 0.9897 0.3651 0.020*
H11B 0.3269 0.8616 0.2679 0.020*
C12 0.36595 (11) 0.6779 (7) 0.3653 (3) 0.0178 (8)
C13 0.40073 (11) 0.7153 (7) 0.3545 (3) 0.0162 (8)
C14 0.41996 (11) 0.5140 (7) 0.3897 (3) 0.0187 (9)
C15 0.45543 (11) 0.4746 (8) 0.3946 (3) 0.0212 (9)
H15 0.4677 0.3387 0.4197 0.025*
C16 0.47149 (12) 0.6516 (8) 0.3594 (3) 0.0236 (9)
H16 0.4953 0.6341 0.3602 0.028*
C17 0.45273 (11) 0.8557 (8) 0.3228 (3) 0.0216 (9)
H17 0.4643 0.9701 0.2994 0.026*
C18 0.41745 (12) 0.8920 (8) 0.3207 (3) 0.0207 (9)
H18 0.4053 1.0295 0.2974 0.025*
Br1 0.040967 (11) 0.65163 (8) 0.39690 (3) 0.02724 (18)
N1 0.21625 (9) 0.5149 (6) 0.3825 (2) 0.0171 (7)
N2 0.24852 (9) 0.8310 (6) 0.3753 (2) 0.0172 (7)
N3 0.27848 (9) 0.9330 (6) 0.3650 (2) 0.0198 (7)
N4 0.36389 (9) 0.4744 (6) 0.4012 (2) 0.0210 (8)
O1 0.39822 (8) 0.3642 (5) 0.4181 (2) 0.0221 (7)
S1 0.28738 (3) 0.48552 (18) 0.36718 (7) 0.0188 (2)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0170 (19) 0.009 (2) 0.027 (2) 0.0004 (16) 0.0056 (16) 0.0014 (15)
C2 0.022 (2) 0.019 (2) 0.024 (2) −0.0042 (18) 0.0089 (17) 0.0014 (17)
C3 0.0144 (19) 0.022 (2) 0.0217 (19) −0.0019 (17) 0.0057 (16) −0.0048 (16)
C4 0.022 (2) 0.016 (2) 0.027 (2) 0.0043 (18) 0.0051 (18) −0.0010 (16)
C5 0.020 (2) 0.015 (2) 0.027 (2) −0.0028 (17) 0.0088 (17) −0.0008 (16)
C6 0.0138 (19) 0.015 (2) 0.0197 (19) 0.0023 (16) 0.0050 (15) −0.0014 (15)
C7 0.0150 (19) 0.015 (2) 0.0200 (19) −0.0008 (16) 0.0056 (16) 0.0012 (15)
C8 0.0155 (19) 0.013 (2) 0.025 (2) 0.0029 (16) 0.0085 (17) −0.0007 (15)
C9 0.017 (2) 0.012 (2) 0.0201 (19) −0.0007 (16) 0.0043 (16) 0.0005 (14)
C10 0.016 (2) 0.013 (2) 0.022 (2) −0.0030 (17) 0.0033 (16) 0.0018 (16)
C11 0.0127 (19) 0.014 (2) 0.024 (2) −0.0023 (16) 0.0063 (16) 0.0041 (16)
C12 0.017 (2) 0.011 (2) 0.0223 (19) −0.0011 (16) 0.0028 (16) −0.0012 (15)
C13 0.016 (2) 0.011 (2) 0.0196 (19) 0.0012 (16) 0.0028 (16) 0.0006 (14)
C14 0.018 (2) 0.012 (2) 0.026 (2) 0.0009 (16) 0.0072 (16) 0.0017 (16)
C15 0.017 (2) 0.014 (2) 0.030 (2) 0.0055 (17) 0.0052 (17) −0.0019 (17)
C16 0.018 (2) 0.025 (3) 0.027 (2) −0.0016 (19) 0.0060 (17) −0.0013 (18)
C17 0.019 (2) 0.020 (2) 0.027 (2) −0.0024 (18) 0.0091 (17) 0.0020 (17)
C18 0.021 (2) 0.016 (2) 0.024 (2) −0.0013 (17) 0.0063 (17) 0.0019 (16)
Br1 0.0161 (2) 0.0308 (3) 0.0357 (3) −0.00248 (19) 0.00975 (18) −0.00722 (19)
N1 0.0158 (16) 0.0112 (18) 0.0244 (17) 0.0023 (14) 0.0066 (14) −0.0005 (13)
N2 0.0159 (17) 0.0112 (18) 0.0254 (17) −0.0007 (14) 0.0082 (14) −0.0012 (13)
N3 0.0128 (16) 0.0151 (19) 0.0324 (19) −0.0055 (14) 0.0089 (15) −0.0014 (15)
N4 0.0151 (17) 0.018 (2) 0.0303 (19) 0.0007 (15) 0.0085 (14) 0.0026 (14)
O1 0.0177 (15) 0.0107 (15) 0.0403 (17) 0.0047 (12) 0.0127 (13) 0.0085 (12)
S1 0.0156 (5) 0.0106 (5) 0.0308 (5) −0.0009 (4) 0.0085 (4) −0.0002 (4)

Geometric parameters (Å, °)

C1—C6 1.393 (6) C10—C11 1.495 (5)
C1—C2 1.395 (6) C10—S1 1.754 (4)
C1—H1 0.9300 C11—C12 1.504 (5)
C2—C3 1.374 (6) C11—H11A 0.9700
C2—H2 0.9300 C11—H11B 0.9700
C3—C4 1.383 (6) C12—N4 1.303 (5)
C3—Br1 1.902 (4) C12—C13 1.433 (6)
C4—C5 1.374 (6) C13—C14 1.387 (5)
C4—H4 0.9300 C13—C18 1.390 (6)
C5—C6 1.396 (6) C14—O1 1.371 (5)
C5—H5 0.9300 C14—C15 1.379 (6)
C6—C7 1.465 (5) C15—C16 1.387 (6)
C7—C8 1.377 (6) C15—H15 0.9300
C7—N1 1.395 (5) C16—C17 1.398 (6)
C8—N2 1.379 (5) C16—H16 0.9300
C8—H8 0.9300 C17—C18 1.381 (6)
C9—N1 1.314 (5) C17—H17 0.9300
C9—N2 1.374 (5) C18—H18 0.9300
C9—S1 1.736 (4) N2—N3 1.360 (5)
C10—N3 1.290 (5) N4—O1 1.427 (4)
C6—C1—C2 120.9 (4) C10—C11—H11B 107.8
C6—C1—H1 119.6 C12—C11—H11B 107.8
C2—C1—H1 119.6 H11A—C11—H11B 107.1
C3—C2—C1 119.0 (4) N4—C12—C13 111.7 (4)
C3—C2—H2 120.5 N4—C12—C11 121.5 (4)
C1—C2—H2 120.5 C13—C12—C11 126.7 (4)
C2—C3—C4 121.5 (4) C14—C13—C18 119.4 (4)
C2—C3—Br1 118.6 (3) C14—C13—C12 104.2 (3)
C4—C3—Br1 119.9 (3) C18—C13—C12 136.4 (4)
C5—C4—C3 119.1 (4) O1—C14—C15 126.2 (4)
C5—C4—H4 120.5 O1—C14—C13 109.4 (3)
C3—C4—H4 120.5 C15—C14—C13 124.4 (4)
C4—C5—C6 121.5 (4) C14—C15—C16 115.4 (4)
C4—C5—H5 119.3 C14—C15—H15 122.3
C6—C5—H5 119.3 C16—C15—H15 122.3
C1—C6—C5 118.1 (4) C15—C16—C17 121.6 (4)
C1—C6—C7 120.5 (4) C15—C16—H16 119.2
C5—C6—C7 121.4 (4) C17—C16—H16 119.2
C8—C7—N1 111.8 (4) C18—C17—C16 121.7 (4)
C8—C7—C6 127.2 (4) C18—C17—H17 119.2
N1—C7—C6 121.0 (4) C16—C17—H17 119.2
C7—C8—N2 104.4 (4) C17—C18—C13 117.6 (4)
C7—C8—H8 127.8 C17—C18—H18 121.2
N2—C8—H8 127.8 C13—C18—H18 121.2
N1—C9—N2 112.6 (4) C9—N1—C7 103.8 (3)
N1—C9—S1 139.1 (3) N3—N2—C9 118.2 (3)
N2—C9—S1 108.3 (3) N3—N2—C8 134.3 (4)
N3—C10—C11 119.0 (4) C9—N2—C8 107.4 (3)
N3—C10—S1 116.6 (3) C10—N3—N2 108.8 (3)
C11—C10—S1 124.1 (3) C12—N4—O1 107.0 (3)
C10—C11—C12 118.0 (3) C14—O1—N4 107.7 (3)
C10—C11—H11A 107.8 C9—S1—C10 88.1 (2)
C12—C11—H11A 107.8
C6—C1—C2—C3 0.8 (6) C13—C14—C15—C16 −1.3 (6)
C1—C2—C3—C4 −1.0 (6) C14—C15—C16—C17 0.7 (6)
C1—C2—C3—Br1 179.3 (3) C15—C16—C17—C18 0.6 (6)
C2—C3—C4—C5 1.1 (6) C16—C17—C18—C13 −1.3 (6)
Br1—C3—C4—C5 −179.3 (3) C14—C13—C18—C17 0.8 (6)
C3—C4—C5—C6 −0.9 (6) C12—C13—C18—C17 −179.8 (4)
C2—C1—C6—C5 −0.7 (6) N2—C9—N1—C7 0.5 (4)
C2—C1—C6—C7 −179.4 (3) S1—C9—N1—C7 −179.3 (4)
C4—C5—C6—C1 0.7 (6) C8—C7—N1—C9 −0.6 (4)
C4—C5—C6—C7 179.4 (4) C6—C7—N1—C9 177.6 (3)
C1—C6—C7—C8 −158.6 (4) N1—C9—N2—N3 −177.5 (3)
C5—C6—C7—C8 22.8 (6) S1—C9—N2—N3 2.4 (4)
C1—C6—C7—N1 23.5 (5) N1—C9—N2—C8 −0.2 (4)
C5—C6—C7—N1 −155.2 (4) S1—C9—N2—C8 179.7 (3)
N1—C7—C8—N2 0.5 (4) C7—C8—N2—N3 176.5 (4)
C6—C7—C8—N2 −177.6 (4) C7—C8—N2—C9 −0.2 (4)
N3—C10—C11—C12 156.9 (4) C11—C10—N3—N2 172.8 (3)
S1—C10—C11—C12 −30.0 (5) S1—C10—N3—N2 −0.8 (4)
C10—C11—C12—N4 6.7 (6) C9—N2—N3—C10 −1.1 (5)
C10—C11—C12—C13 −176.4 (4) C8—N2—N3—C10 −177.5 (4)
N4—C12—C13—C14 −1.2 (4) C13—C12—N4—O1 0.9 (4)
C11—C12—C13—C14 −178.4 (4) C11—C12—N4—O1 178.3 (3)
N4—C12—C13—C18 179.3 (4) C15—C14—O1—N4 179.5 (4)
C11—C12—C13—C18 2.2 (7) C13—C14—O1—N4 −0.5 (4)
C18—C13—C14—O1 −179.4 (3) C12—N4—O1—C14 −0.3 (4)
C12—C13—C14—O1 1.0 (4) N1—C9—S1—C10 177.7 (5)
C18—C13—C14—C15 0.5 (6) N2—C9—S1—C10 −2.1 (3)
C12—C13—C14—C15 −179.0 (4) N3—C10—S1—C9 1.8 (3)
O1—C14—C15—C16 178.7 (4) C11—C10—S1—C9 −171.5 (3)

Hydrogen-bond geometry (Å, °)

Cg4 and Cg5 are the centroids of the C1–C6 and C13–C18 rings, respectively.
D—H···A D—H H···A D···A D—H···A
C2—H2···O1i 0.93 2.38 3.219 (6) 150
C8—H8···N1ii 0.93 2.60 3.469 (6) 156
C11—H11B···N1iii 0.97 2.48 3.358 (6) 150
C4—H4···Cg5iii 0.93 2.96 3.554 (5) 123
C18—H18···Cg4iii 0.93 2.83 3.496 (5) 130

Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) x, y+1, z; (iii) −x+1/2, y+1/2, −z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2359).

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810052232/pv2359sup1.cif

e-67-0o154-sup1.cif (19.9KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052232/pv2359Isup2.hkl

e-67-0o154-Isup2.hkl (165KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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