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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 18;67(Pt 1):o194. doi: 10.1107/S1600536810051354

Disopropyl {[(2S,3S)-2-amino-3-methyl­penta­namido](phen­yl)meth­yl}phosphinate

Hong-Ming Cheng a, Han-Wen Zhang a, Hua Fang b, Zhen Wu c, Yu-Fen Zhao a,*
PMCID: PMC3050147  PMID: 21522696

Abstract

There are two independent mol­ecules in the asymmetric unit of the title compound, C19H33N2O4P. In the crystal, the two independent mol­ecules are linked via N—H⋯O=P hydrogen bonds, forming dimers.

Related literature

For the biological activity of phosphono-peptides, see: Li et al. (1999 ▶); Liu et al. (2002 ▶); Wang et al. (2001 ▶); Senten et al. (2003 ▶); Joossens & Van der Veken (2004 ▶).graphic file with name e-67-0o194-scheme1.jpg

Experimental

Crystal data

  • C19H33N2O4P

  • M r = 384.44

  • Monoclinic, Inline graphic

  • a = 9.3455 (3) Å

  • b = 23.6079 (6) Å

  • c = 10.0517 (4) Å

  • β = 103.819 (4)°

  • V = 2153.49 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.15 mm−1

  • T = 293 K

  • 0.37 × 0.22 × 0.18 mm

Data collection

  • Bruker APEX area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.946, T max = 0.973

  • 7721 measured reflections

  • 6100 independent reflections

  • 4077 reflections with I > 2σ(I)

  • R int = 0.028

Refinement

  • R[F 2 > 2σ(F 2)] = 0.043

  • wR(F 2) = 0.068

  • S = 0.82

  • 6100 reflections

  • 469 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.25 e Å−3

  • Δρmin = −0.21 e Å−3

  • Absolute structure: Flack (1983 ▶), 2215 Friedel pairs

  • Flack parameter: −0.04 (8)

Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810051354/su2222sup1.cif

e-67-0o194-sup1.cif (33.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051354/su2222Isup2.hkl

e-67-0o194-Isup2.hkl (298.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
N1—H1A⋯O2′i 0.86 2.07 2.913 (4) 166
N1′—H1′A⋯O2ii 0.86 1.98 2.833 (4) 171

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

Financial support from the Major Program of the National Natural Science Foundation of China (20732004) and the General Programs of the National Natural Science Foundation of China (20972130 and 40806032) is gratefully acknowledged.

supplementary crystallographic information

Comment

In recent years phosphono-peptides have stimulated a great deal of interest due to their considerable biological activities, including antigrowth (Li et al., 1999), antitumoral (Liu et al., 2002), antiviral (Wang et al., 2001), and inhibiton of serine protease effects (Senten et al., 2003 and Joossens et al., 2004).

The title compound crystallized with two independent chiral molecules (A and B) in the asymmetric unit (Fig. 1). They differ only in the chirality of atom C7 (molecule A) and C7' (molecule B).

In the crystal the two independent molecules are linked via N—H···O=P hydrogen bonds, involving the amide unit and a phosphoryl O atom, to form dimers (Table 1).

Experimental

To a solution of the starting material, tert-butyl (2S,3S)-1-((isopropoxy(isopropyl)phosphoryl)(phenyl)methylamino) -3-methyl-1-oxopentan-2-ylcarbamate, (1 in scheme), (1 mmol) in dichloromethane (CH2Cl2) (10 ml) at 273 K was added trifluoroacetic acid (TFA) (4 ml). After consumption of the starting material (2h), the solvent was then removed under reduced pressure to give a residue, which was extracted with CH2Cl2 (3 × 15 ml). The organic phase was dried over anhydrous MgSO4 and concentrated under vacuum to obtain a slurry residue, which was purified by silica gel column chromatography (petroleum ether/isopropyl alcohol = 35:1) to give the title compound as a colorless amorphous solid. Single crystals of the title compound, suitable for X-ray diffraction analysis, were obtained by slow evaporation of a CH2Cl2 solution.

Refinement

All H atoms were placed in geometrically idealized positions and treated as riding on their parent atoms, with C—H = 0.93 (aromatic), 0.96 (CH3), 0.97 (CH2) and 0.98 (CH), N—H = 0.86 Å with Uiso(H) = k × Ueq(C or N), where k = 1.5 for methyl and amine H-atoms and 1.2 for all other H-atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the two indendent molecules (A and B) of the title compound, with displacement ellipsoids drawn at the 30% probability level. The H-atoms are drawn as spheres of arbitrary radii.

Fig. 2.

Fig. 2.

The formation of the title compound.

Crystal data

C19H33N2O4P F(000) = 832
Mr = 384.44 Dx = 1.186 Mg m−3
Monoclinic, P21 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2yb Cell parameters from 2328 reflections
a = 9.3455 (3) Å θ = 2.2–27.4°
b = 23.6079 (6) Å µ = 0.15 mm−1
c = 10.0517 (4) Å T = 293 K
β = 103.819 (4)° Block, colourless
V = 2153.49 (12) Å3 0.37 × 0.22 × 0.18 mm
Z = 4

Data collection

Bruker APEX area-detector diffractometer 6100 independent reflections
Radiation source: fine-focus sealed tube 4077 reflections with I > 2σ(I)
graphite Rint = 0.028
φ and ω scans θmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001) h = −11→10
Tmin = 0.946, Tmax = 0.973 k = −28→27
7721 measured reflections l = −10→11

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043 H-atom parameters constrained
wR(F2) = 0.068 w = 1/[σ2(Fo2) + (0.0212P)2] where P = (Fo2 + 2Fc2)/3
S = 0.82 (Δ/σ)max < 0.001
6100 reflections Δρmax = 0.25 e Å−3
469 parameters Δρmin = −0.21 e Å−3
1 restraint Absolute structure: Flack (1983), 2215 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: −0.04 (8)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
P1 0.54488 (9) 0.12742 (4) 0.41034 (10) 0.0250 (2)
P1' 0.76424 (10) 0.71698 (4) 0.26570 (11) 0.0290 (2)
O3 0.5955 (2) 0.07253 (9) 0.3476 (3) 0.0301 (6)
O3' 0.8151 (2) 0.77426 (9) 0.2128 (3) 0.0332 (6)
O2 0.5256 (2) 0.12060 (9) 0.5501 (2) 0.0283 (6)
O2' 0.7782 (2) 0.71540 (10) 0.4143 (2) 0.0348 (6)
N1 0.3215 (3) 0.20195 (10) 0.3342 (3) 0.0265 (7)
H1A 0.2822 0.2011 0.4033 0.032*
O4 0.6659 (2) 0.17261 (9) 0.4084 (2) 0.0284 (6)
O1 0.3933 (3) 0.25766 (9) 0.1783 (3) 0.0411 (7)
O4' 0.8531 (2) 0.67185 (9) 0.2055 (3) 0.0318 (6)
N1' 0.5259 (3) 0.64986 (10) 0.1920 (3) 0.0285 (8)
H1'A 0.5203 0.6421 0.2742 0.034*
C7' 0.5793 (3) 0.70512 (12) 0.1630 (4) 0.0266 (9)
H7'A 0.5834 0.7056 0.0665 0.032*
C1' 0.4849 (4) 0.61045 (15) 0.0934 (4) 0.0314 (9)
C7 0.3786 (3) 0.14968 (12) 0.2894 (4) 0.0234 (9)
H7A 0.4048 0.1578 0.2026 0.028*
O1' 0.4953 (3) 0.61820 (11) −0.0246 (3) 0.0452 (7)
C8' 0.4764 (3) 0.75257 (14) 0.1842 (4) 0.0253 (9)
C14' 0.8065 (4) 0.82932 (15) 0.2768 (4) 0.0371 (10)
H14A 0.7221 0.8299 0.3189 0.045*
C8 0.2625 (4) 0.10308 (13) 0.2619 (4) 0.0261 (9)
C2 0.2534 (4) 0.30147 (13) 0.3222 (4) 0.0336 (10)
H2A 0.1866 0.2859 0.3748 0.040*
C3 0.1619 (3) 0.33578 (13) 0.2048 (4) 0.0277 (9)
H3A 0.2298 0.3545 0.1581 0.033*
C3' 0.5447 (4) 0.50929 (14) 0.1574 (4) 0.0384 (11)
H3'A 0.5721 0.5035 0.0702 0.046*
C1 0.3288 (4) 0.25194 (15) 0.2697 (4) 0.0298 (9)
C9' 0.4235 (4) 0.75559 (14) 0.3020 (4) 0.0341 (10)
H9'A 0.4504 0.7280 0.3694 0.041*
C2' 0.4246 (4) 0.55510 (14) 0.1336 (4) 0.0342 (10)
H2'A 0.3939 0.5609 0.2193 0.041*
C14 0.5785 (4) 0.01592 (14) 0.3957 (5) 0.0405 (11)
H14B 0.5159 0.0171 0.4612 0.049*
C9 0.2107 (4) 0.08209 (15) 0.1318 (5) 0.0458 (11)
H9A 0.2456 0.0966 0.0595 0.055*
C12' 0.3435 (4) 0.83763 (18) 0.1064 (5) 0.0591 (13)
H12A 0.3152 0.8653 0.0394 0.071*
N2 0.3607 (3) 0.33692 (12) 0.4136 (4) 0.0514 (9)
H2B 0.3655 0.3725 0.3969 0.062*
H2C 0.4194 0.3223 0.4844 0.062*
C5 0.0744 (4) 0.38135 (14) 0.2554 (4) 0.0449 (11)
H5A 0.1355 0.3985 0.3372 0.054*
H5B −0.0098 0.3641 0.2804 0.054*
N2' 0.2973 (3) 0.53769 (12) 0.0285 (4) 0.0572 (11)
H2'B 0.2672 0.5582 −0.0435 0.069*
H2'C 0.2519 0.5068 0.0380 0.069*
C5' 0.4878 (5) 0.45359 (15) 0.1966 (5) 0.0617 (14)
H5'A 0.4002 0.4435 0.1272 0.074*
H5'B 0.4588 0.4586 0.2822 0.074*
C10' 0.3322 (4) 0.79868 (15) 0.3199 (4) 0.0397 (10)
H10A 0.2963 0.7999 0.3986 0.048*
C6 0.0196 (4) 0.42788 (15) 0.1484 (5) 0.0558 (13)
H6A −0.0365 0.4553 0.1851 0.084*
H6B −0.0414 0.4113 0.0673 0.084*
H6C 0.1025 0.4462 0.1260 0.084*
C17 0.7184 (4) 0.19043 (14) 0.2890 (4) 0.0378 (10)
H17A 0.6411 0.1839 0.2055 0.045*
C13' 0.4373 (4) 0.79381 (15) 0.0870 (4) 0.0392 (10)
H13A 0.4729 0.7928 0.0081 0.047*
C4 0.0620 (4) 0.29675 (15) 0.1011 (4) 0.0440 (11)
H4A 0.1211 0.2692 0.0687 0.066*
H4B 0.0081 0.3188 0.0253 0.066*
H4C −0.0058 0.2778 0.1443 0.066*
C13 0.2073 (4) 0.08177 (15) 0.3678 (4) 0.0391 (11)
H13B 0.2390 0.0966 0.4557 0.047*
C18' 1.0836 (4) 0.67632 (19) 0.1413 (5) 0.0633 (14)
H18A 1.0643 0.7143 0.1077 0.095*
H18B 1.0433 0.6500 0.0694 0.095*
H18C 1.1881 0.6706 0.1715 0.095*
C11' 0.2934 (4) 0.83991 (17) 0.2233 (5) 0.0507 (12)
H11A 0.2329 0.8696 0.2368 0.061*
C17' 1.0145 (4) 0.66720 (16) 0.2576 (4) 0.0400 (10)
H17B 1.0494 0.6959 0.3284 0.048*
C11 0.0566 (4) 0.01705 (18) 0.2126 (6) 0.0605 (14)
H11B −0.0106 −0.0127 0.1958 0.073*
C16 0.7231 (5) −0.00693 (16) 0.4637 (6) 0.090 (2)
H16A 0.7652 0.0155 0.5430 0.136*
H16B 0.7867 −0.0060 0.4015 0.136*
H16C 0.7123 −0.0453 0.4911 0.136*
C15 0.5065 (5) −0.02030 (18) 0.2762 (6) 0.094 (2)
H15A 0.4094 −0.0061 0.2366 0.141*
H15B 0.4999 −0.0586 0.3065 0.141*
H15C 0.5641 −0.0194 0.2089 0.141*
C6' 0.5957 (5) 0.40500 (16) 0.2128 (6) 0.097 (2)
H6'A 0.5496 0.3711 0.2348 0.145*
H6'B 0.6805 0.4134 0.2851 0.145*
H6'C 0.6256 0.3996 0.1287 0.145*
C19 0.7503 (4) 0.25248 (15) 0.3056 (5) 0.0517 (12)
H19A 0.6606 0.2727 0.3031 0.078*
H19B 0.7920 0.2655 0.2325 0.078*
H19C 0.8189 0.2591 0.3918 0.078*
C15' 0.9436 (4) 0.83977 (18) 0.3822 (4) 0.0576 (13)
H15D 0.9513 0.8130 0.4554 0.086*
H15E 0.9421 0.8775 0.4174 0.086*
H15F 1.0267 0.8356 0.3423 0.086*
C19' 1.0489 (4) 0.60907 (16) 0.3168 (5) 0.0689 (15)
H19D 1.0076 0.6047 0.3950 0.103*
H19E 1.1538 0.6041 0.3442 0.103*
H19F 1.0072 0.5812 0.2490 0.103*
C16' 0.7826 (5) 0.87172 (15) 0.1608 (5) 0.0604 (14)
H16D 0.6898 0.8644 0.0978 0.091*
H16E 0.8605 0.8684 0.1141 0.091*
H16F 0.7823 0.9093 0.1971 0.091*
C12 0.1044 (4) 0.03818 (17) 0.3426 (5) 0.0515 (12)
H12B 0.0680 0.0234 0.4137 0.062*
C10 0.1072 (5) 0.03950 (19) 0.1086 (5) 0.0602 (13)
H10B 0.0715 0.0259 0.0200 0.072*
C4' 0.6813 (4) 0.52743 (15) 0.2605 (5) 0.0594 (14)
H4'A 0.7552 0.4985 0.2690 0.089*
H4'B 0.6585 0.5333 0.3476 0.089*
H4'C 0.7177 0.5620 0.2306 0.089*
C18 0.8524 (4) 0.15616 (16) 0.2835 (5) 0.0625 (15)
H18D 0.8254 0.1170 0.2686 0.094*
H18E 0.9249 0.1600 0.3685 0.094*
H18F 0.8925 0.1696 0.2098 0.094*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
P1 0.0293 (5) 0.0232 (5) 0.0231 (6) 0.0013 (4) 0.0075 (5) −0.0012 (5)
P1' 0.0313 (5) 0.0299 (6) 0.0274 (7) −0.0014 (5) 0.0100 (5) 0.0004 (5)
O3 0.0392 (13) 0.0222 (13) 0.0314 (17) 0.0077 (11) 0.0134 (13) 0.0018 (12)
O3' 0.0485 (15) 0.0234 (14) 0.0322 (17) −0.0054 (12) 0.0186 (14) −0.0032 (13)
O2 0.0369 (13) 0.0296 (14) 0.0209 (15) 0.0029 (11) 0.0117 (12) −0.0018 (13)
O2' 0.0434 (14) 0.0386 (14) 0.0243 (15) −0.0068 (13) 0.0114 (13) 0.0001 (14)
N1 0.0382 (17) 0.0211 (17) 0.0247 (19) 0.0043 (13) 0.0167 (16) 0.0048 (15)
O4 0.0338 (13) 0.0297 (13) 0.0244 (16) −0.0032 (11) 0.0121 (13) −0.0035 (12)
O1 0.0585 (17) 0.0320 (16) 0.043 (2) 0.0109 (13) 0.0331 (16) 0.0119 (14)
O4' 0.0282 (13) 0.0339 (14) 0.0335 (17) 0.0039 (11) 0.0074 (13) −0.0028 (13)
N1' 0.0366 (16) 0.0302 (18) 0.0180 (19) −0.0070 (13) 0.0049 (16) 0.0008 (15)
C7' 0.0359 (19) 0.025 (2) 0.022 (2) −0.0058 (17) 0.0134 (18) 0.0030 (18)
C1' 0.030 (2) 0.034 (2) 0.031 (3) 0.0018 (17) 0.009 (2) −0.002 (2)
C7 0.0307 (19) 0.023 (2) 0.018 (2) 0.0045 (15) 0.0107 (18) −0.0022 (17)
O1' 0.0679 (18) 0.0463 (17) 0.0259 (17) −0.0096 (14) 0.0199 (15) −0.0034 (15)
C8' 0.0240 (19) 0.028 (2) 0.024 (3) −0.0037 (16) 0.0054 (19) 0.0019 (19)
C14' 0.038 (2) 0.031 (2) 0.047 (3) −0.0045 (18) 0.019 (2) −0.005 (2)
C8 0.0291 (19) 0.023 (2) 0.026 (2) 0.0018 (16) 0.0051 (19) 0.0037 (18)
C2 0.039 (2) 0.023 (2) 0.043 (3) 0.0058 (17) 0.020 (2) 0.001 (2)
C3 0.034 (2) 0.0202 (19) 0.033 (3) 0.0032 (17) 0.0156 (19) 0.0034 (18)
C3' 0.052 (2) 0.029 (2) 0.039 (3) −0.0053 (19) 0.023 (2) −0.004 (2)
C1 0.033 (2) 0.027 (2) 0.033 (3) 0.0044 (18) 0.016 (2) 0.001 (2)
C9' 0.036 (2) 0.031 (2) 0.036 (3) 0.0073 (18) 0.010 (2) 0.006 (2)
C2' 0.037 (2) 0.032 (2) 0.036 (3) −0.0107 (18) 0.015 (2) −0.002 (2)
C14 0.058 (3) 0.019 (2) 0.057 (3) 0.002 (2) 0.038 (3) 0.003 (2)
C9 0.050 (2) 0.041 (2) 0.044 (3) −0.008 (2) 0.006 (2) −0.013 (2)
C12' 0.063 (3) 0.058 (3) 0.064 (4) 0.025 (2) 0.030 (3) 0.028 (3)
N2 0.065 (2) 0.0335 (19) 0.045 (3) 0.0142 (17) −0.0096 (19) −0.0124 (18)
C5 0.056 (2) 0.030 (2) 0.052 (3) 0.0140 (19) 0.018 (2) 0.004 (2)
N2' 0.059 (2) 0.040 (2) 0.061 (3) −0.0297 (17) −0.010 (2) 0.007 (2)
C5' 0.076 (3) 0.039 (3) 0.080 (4) 0.002 (2) 0.038 (3) 0.002 (3)
C10' 0.035 (2) 0.045 (2) 0.040 (3) 0.0044 (19) 0.012 (2) −0.003 (2)
C6 0.055 (3) 0.039 (3) 0.075 (4) 0.018 (2) 0.020 (3) 0.016 (3)
C17 0.040 (2) 0.043 (2) 0.034 (3) −0.0089 (18) 0.017 (2) −0.002 (2)
C13' 0.038 (2) 0.046 (2) 0.040 (3) 0.006 (2) 0.020 (2) 0.007 (2)
C4 0.036 (2) 0.045 (2) 0.051 (3) 0.0009 (19) 0.011 (2) −0.003 (2)
C13 0.034 (2) 0.041 (2) 0.040 (3) −0.0028 (19) 0.002 (2) −0.001 (2)
C18' 0.047 (3) 0.080 (3) 0.068 (4) 0.007 (2) 0.024 (3) 0.009 (3)
C11' 0.041 (2) 0.047 (3) 0.064 (4) 0.015 (2) 0.014 (3) 0.002 (3)
C17' 0.029 (2) 0.041 (2) 0.047 (3) 0.0018 (18) 0.004 (2) −0.004 (2)
C11 0.037 (3) 0.044 (3) 0.094 (5) −0.012 (2) 0.001 (3) −0.008 (3)
C16 0.099 (4) 0.040 (3) 0.097 (5) 0.016 (3) −0.046 (3) 0.004 (3)
C15 0.080 (4) 0.042 (3) 0.140 (6) 0.007 (3) −0.016 (4) −0.027 (3)
C6' 0.126 (4) 0.037 (3) 0.165 (7) 0.016 (3) 0.106 (5) 0.019 (3)
C19 0.056 (3) 0.040 (2) 0.066 (4) −0.002 (2) 0.028 (3) 0.012 (2)
C15' 0.058 (3) 0.067 (3) 0.049 (3) −0.013 (2) 0.015 (3) −0.020 (3)
C19' 0.056 (3) 0.061 (3) 0.080 (4) 0.006 (2) −0.001 (3) 0.018 (3)
C16' 0.079 (3) 0.029 (2) 0.080 (4) 0.002 (2) 0.033 (3) 0.004 (3)
C12 0.040 (2) 0.056 (3) 0.057 (4) −0.013 (2) 0.008 (3) 0.011 (3)
C10 0.056 (3) 0.067 (3) 0.055 (4) −0.012 (3) 0.009 (3) −0.020 (3)
C4' 0.052 (3) 0.038 (2) 0.078 (4) 0.010 (2) −0.003 (3) −0.001 (3)
C18 0.057 (3) 0.061 (3) 0.086 (4) 0.003 (2) 0.051 (3) 0.008 (3)

Geometric parameters (Å, °)

P1—O2 1.467 (2) C5—H5B 0.9700
P1—O4 1.558 (2) N2'—H2'B 0.8600
P1—O3 1.563 (2) N2'—H2'C 0.8600
P1—C7 1.807 (3) C5'—C6' 1.510 (5)
P1'—O2' 1.469 (2) C5'—H5'A 0.9700
P1'—O4' 1.559 (2) C5'—H5'B 0.9700
P1'—O3' 1.568 (2) C10'—C11' 1.362 (5)
P1'—C7' 1.810 (3) C10'—H10A 0.9300
O3—C14 1.443 (4) C6—H6A 0.9600
O3'—C14' 1.461 (4) C6—H6B 0.9600
N1—C1 1.356 (4) C6—H6C 0.9600
N1—C7 1.458 (4) C17—C19 1.496 (4)
N1—H1A 0.8600 C17—C18 1.503 (5)
O4—C17 1.463 (4) C17—H17A 0.9800
O1—C1 1.220 (4) C13'—H13A 0.9300
O4'—C17' 1.478 (4) C4—H4A 0.9600
N1'—C1' 1.346 (4) C4—H4B 0.9600
N1'—C7' 1.451 (4) C4—H4C 0.9600
N1'—H1'A 0.8600 C13—C12 1.390 (5)
C7'—C8' 1.524 (4) C13—H13B 0.9300
C7'—H7'A 0.9800 C18'—C17' 1.480 (6)
C1'—O1' 1.227 (4) C18'—H18A 0.9600
C1'—C2' 1.515 (5) C18'—H18B 0.9600
C7—C8 1.524 (4) C18'—H18C 0.9600
C7—H7A 0.9800 C11'—H11A 0.9300
C8'—C13' 1.366 (5) C17'—C19' 1.500 (5)
C8'—C9' 1.390 (5) C17'—H17B 0.9800
C14'—C15' 1.475 (5) C11—C10 1.355 (7)
C14'—C16' 1.512 (5) C11—C12 1.369 (7)
C14'—H14A 0.9800 C11—H11B 0.9300
C8—C9 1.374 (5) C16—H16A 0.9600
C8—C13 1.384 (5) C16—H16B 0.9600
C2—N2 1.452 (4) C16—H16C 0.9600
C2—C3 1.516 (5) C15—H15A 0.9600
C2—C1 1.523 (5) C15—H15B 0.9600
C2—H2A 0.9800 C15—H15C 0.9600
C3—C5 1.511 (4) C6'—H6'A 0.9600
C3—C4 1.530 (5) C6'—H6'B 0.9600
C3—H3A 0.9800 C6'—H6'C 0.9600
C3'—C4' 1.502 (5) C19—H19A 0.9600
C3'—C5' 1.506 (5) C19—H19B 0.9600
C3'—C2' 1.536 (5) C19—H19C 0.9600
C3'—H3'A 0.9800 C15'—H15D 0.9600
C9'—C10' 1.367 (4) C15'—H15E 0.9600
C9'—H9'A 0.9300 C15'—H15F 0.9600
C2'—N2' 1.450 (4) C19'—H19D 0.9600
C2'—H2'A 0.9800 C19'—H19E 0.9600
C14—C16 1.464 (5) C19'—H19F 0.9600
C14—C15 1.496 (6) C16'—H16D 0.9600
C14—H14B 0.9800 C16'—H16E 0.9600
C9—C10 1.376 (5) C16'—H16F 0.9600
C9—H9A 0.9300 C12—H12B 0.9300
C12'—C11' 1.366 (6) C10—H10B 0.9300
C12'—C13' 1.399 (5) C4'—H4'A 0.9600
C12'—H12A 0.9300 C4'—H4'B 0.9600
N2—H2B 0.8600 C4'—H4'C 0.9600
N2—H2C 0.8600 C18—H18D 0.9600
C5—C6 1.537 (5) C18—H18E 0.9600
C5—H5A 0.9700 C18—H18F 0.9600
O2—P1—O4 110.01 (14) C6'—C5'—H5'B 108.5
O2—P1—O3 114.41 (14) H5'A—C5'—H5'B 107.5
O4—P1—O3 105.78 (12) C11'—C10'—C9' 120.4 (4)
O2—P1—C7 113.18 (14) C11'—C10'—H10A 119.8
O4—P1—C7 107.63 (14) C9'—C10'—H10A 119.8
O3—P1—C7 105.33 (14) C5—C6—H6A 109.5
O2'—P1'—O4' 116.83 (13) C5—C6—H6B 109.5
O2'—P1'—O3' 113.99 (13) H6A—C6—H6B 109.5
O4'—P1'—O3' 103.00 (13) C5—C6—H6C 109.5
O2'—P1'—C7' 114.64 (16) H6A—C6—H6C 109.5
O4'—P1'—C7' 101.38 (14) H6B—C6—H6C 109.5
O3'—P1'—C7' 105.38 (14) O4—C17—C19 106.7 (3)
C14—O3—P1 124.4 (2) O4—C17—C18 108.7 (3)
C14'—O3'—P1' 124.4 (2) C19—C17—C18 112.7 (3)
C1—N1—C7 121.7 (3) O4—C17—H17A 109.6
C1—N1—H1A 119.2 C19—C17—H17A 109.6
C7—N1—H1A 119.2 C18—C17—H17A 109.6
C17—O4—P1 126.4 (2) C8'—C13'—C12' 119.8 (4)
C17'—O4'—P1' 120.4 (2) C8'—C13'—H13A 120.1
C1'—N1'—C7' 121.6 (3) C12'—C13'—H13A 120.1
C1'—N1'—H1'A 119.2 C3—C4—H4A 109.5
C7'—N1'—H1'A 119.2 C3—C4—H4B 109.5
N1'—C7'—C8' 111.9 (3) H4A—C4—H4B 109.5
N1'—C7'—P1' 110.6 (2) C3—C4—H4C 109.5
C8'—C7'—P1' 110.8 (2) H4A—C4—H4C 109.5
N1'—C7'—H7'A 107.8 H4B—C4—H4C 109.5
C8'—C7'—H7'A 107.8 C8—C13—C12 119.8 (4)
P1'—C7'—H7'A 107.8 C8—C13—H13B 120.1
O1'—C1'—N1' 122.3 (3) C12—C13—H13B 120.1
O1'—C1'—C2' 120.4 (4) C17'—C18'—H18A 109.5
N1'—C1'—C2' 117.3 (3) C17'—C18'—H18B 109.5
N1—C7—C8 111.7 (3) H18A—C18'—H18B 109.5
N1—C7—P1 111.0 (2) C17'—C18'—H18C 109.5
C8—C7—P1 111.9 (2) H18A—C18'—H18C 109.5
N1—C7—H7A 107.3 H18B—C18'—H18C 109.5
C8—C7—H7A 107.3 C10'—C11'—C12' 119.9 (4)
P1—C7—H7A 107.3 C10'—C11'—H11A 120.1
C13'—C8'—C9' 118.9 (3) C12'—C11'—H11A 120.1
C13'—C8'—C7' 119.6 (3) O4'—C17'—C18' 108.1 (3)
C9'—C8'—C7' 121.4 (3) O4'—C17'—C19' 108.2 (3)
O3'—C14'—C15' 109.6 (3) C18'—C17'—C19' 110.7 (3)
O3'—C14'—C16' 105.2 (3) O4'—C17'—H17B 109.9
C15'—C14'—C16' 112.7 (3) C18'—C17'—H17B 109.9
O3'—C14'—H14A 109.7 C19'—C17'—H17B 109.9
C15'—C14'—H14A 109.7 C10—C11—C12 119.9 (4)
C16'—C14'—H14A 109.7 C10—C11—H11B 120.0
C9—C8—C13 119.3 (3) C12—C11—H11B 120.0
C9—C8—C7 120.4 (4) C14—C16—H16A 109.5
C13—C8—C7 120.2 (4) C14—C16—H16B 109.5
N2—C2—C3 111.1 (3) H16A—C16—H16B 109.5
N2—C2—C1 110.8 (3) C14—C16—H16C 109.5
C3—C2—C1 111.2 (3) H16A—C16—H16C 109.5
N2—C2—H2A 107.9 H16B—C16—H16C 109.5
C3—C2—H2A 107.9 C14—C15—H15A 109.5
C1—C2—H2A 107.9 C14—C15—H15B 109.5
C5—C3—C2 111.6 (3) H15A—C15—H15B 109.5
C5—C3—C4 111.5 (3) C14—C15—H15C 109.5
C2—C3—C4 110.3 (3) H15A—C15—H15C 109.5
C5—C3—H3A 107.7 H15B—C15—H15C 109.5
C2—C3—H3A 107.7 C5'—C6'—H6'A 109.5
C4—C3—H3A 107.7 C5'—C6'—H6'B 109.5
C4'—C3'—C5' 111.3 (4) H6'A—C6'—H6'B 109.5
C4'—C3'—C2' 112.1 (3) C5'—C6'—H6'C 109.5
C5'—C3'—C2' 111.4 (3) H6'A—C6'—H6'C 109.5
C4'—C3'—H3'A 107.2 H6'B—C6'—H6'C 109.5
C5'—C3'—H3'A 107.2 C17—C19—H19A 109.5
C2'—C3'—H3'A 107.2 C17—C19—H19B 109.5
O1—C1—N1 123.1 (3) H19A—C19—H19B 109.5
O1—C1—C2 121.9 (3) C17—C19—H19C 109.5
N1—C1—C2 115.0 (3) H19A—C19—H19C 109.5
C10'—C9'—C8' 120.7 (4) H19B—C19—H19C 109.5
C10'—C9'—H9'A 119.7 C14'—C15'—H15D 109.5
C8'—C9'—H9'A 119.7 C14'—C15'—H15E 109.5
N2'—C2'—C1' 110.0 (3) H15D—C15'—H15E 109.5
N2'—C2'—C3' 110.8 (3) C14'—C15'—H15F 109.5
C1'—C2'—C3' 110.2 (3) H15D—C15'—H15F 109.5
N2'—C2'—H2'A 108.6 H15E—C15'—H15F 109.5
C1'—C2'—H2'A 108.6 C17'—C19'—H19D 109.5
C3'—C2'—H2'A 108.6 C17'—C19'—H19E 109.5
O3—C14—C16 109.5 (3) H19D—C19'—H19E 109.5
O3—C14—C15 109.0 (4) C17'—C19'—H19F 109.5
C16—C14—C15 110.6 (3) H19D—C19'—H19F 109.5
O3—C14—H14B 109.2 H19E—C19'—H19F 109.5
C16—C14—H14B 109.2 C14'—C16'—H16D 109.5
C15—C14—H14B 109.2 C14'—C16'—H16E 109.5
C8—C9—C10 119.9 (4) H16D—C16'—H16E 109.5
C8—C9—H9A 120.1 C14'—C16'—H16F 109.5
C10—C9—H9A 120.1 H16D—C16'—H16F 109.5
C11'—C12'—C13' 120.3 (4) H16E—C16'—H16F 109.5
C11'—C12'—H12A 119.9 C11—C12—C13 119.8 (5)
C13'—C12'—H12A 119.9 C11—C12—H12B 120.1
C2—N2—H2B 120.0 C13—C12—H12B 120.1
C2—N2—H2C 120.0 C11—C10—C9 121.1 (5)
H2B—N2—H2C 120.0 C11—C10—H10B 119.5
C3—C5—C6 112.9 (3) C9—C10—H10B 119.5
C3—C5—H5A 109.0 C3'—C4'—H4'A 109.5
C6—C5—H5A 109.0 C3'—C4'—H4'B 109.5
C3—C5—H5B 109.0 H4'A—C4'—H4'B 109.5
C6—C5—H5B 109.0 C3'—C4'—H4'C 109.5
H5A—C5—H5B 107.8 H4'A—C4'—H4'C 109.5
C2'—N2'—H2'B 120.0 H4'B—C4'—H4'C 109.5
C2'—N2'—H2'C 120.0 C17—C18—H18D 109.5
H2'B—N2'—H2'C 120.0 C17—C18—H18E 109.5
C3'—C5'—C6' 115.0 (3) H18D—C18—H18E 109.5
C3'—C5'—H5'A 108.5 C17—C18—H18F 109.5
C6'—C5'—H5'A 108.5 H18D—C18—H18F 109.5
C3'—C5'—H5'B 108.5 H18E—C18—H18F 109.5
O2—P1—O3—C14 20.4 (3) N2—C2—C3—C4 173.5 (3)
O4—P1—O3—C14 141.7 (3) C1—C2—C3—C4 49.6 (4)
C7—P1—O3—C14 −104.5 (3) C7—N1—C1—O1 −6.1 (5)
O2'—P1'—O3'—C14' −29.8 (3) C7—N1—C1—C2 175.4 (3)
O4'—P1'—O3'—C14' −157.4 (3) N2—C2—C1—O1 −78.0 (5)
C7'—P1'—O3'—C14' 96.7 (3) C3—C2—C1—O1 46.1 (5)
O2—P1—O4—C17 178.8 (2) N2—C2—C1—N1 100.6 (4)
O3—P1—O4—C17 54.8 (3) C3—C2—C1—N1 −135.3 (3)
C7—P1—O4—C17 −57.5 (3) C13'—C8'—C9'—C10' 0.8 (5)
O2'—P1'—O4'—C17' −56.4 (3) C7'—C8'—C9'—C10' 179.5 (3)
O3'—P1'—O4'—C17' 69.4 (3) O1'—C1'—C2'—N2' −42.7 (5)
C7'—P1'—O4'—C17' 178.3 (3) N1'—C1'—C2'—N2' 137.5 (3)
C1'—N1'—C7'—C8' 115.2 (3) O1'—C1'—C2'—C3' 79.8 (4)
C1'—N1'—C7'—P1' −120.7 (3) N1'—C1'—C2'—C3' −100.0 (4)
O2'—P1'—C7'—N1' −60.2 (3) C4'—C3'—C2'—N2' 176.9 (3)
O4'—P1'—C7'—N1' 66.6 (3) C5'—C3'—C2'—N2' −57.6 (5)
O3'—P1'—C7'—N1' 173.6 (2) C4'—C3'—C2'—C1' 54.9 (5)
O2'—P1'—C7'—C8' 64.5 (3) C5'—C3'—C2'—C1' −179.6 (3)
O4'—P1'—C7'—C8' −168.7 (2) P1—O3—C14—C16 −109.8 (4)
O3'—P1'—C7'—C8' −61.6 (3) P1—O3—C14—C15 129.1 (3)
C7'—N1'—C1'—O1' 2.7 (5) C13—C8—C9—C10 −1.3 (6)
C7'—N1'—C1'—C2' −177.5 (3) C7—C8—C9—C10 179.2 (3)
C1—N1—C7—C8 −125.8 (3) C2—C3—C5—C6 162.1 (3)
C1—N1—C7—P1 108.6 (3) C4—C3—C5—C6 −74.0 (4)
O2—P1—C7—N1 55.9 (3) C4'—C3'—C5'—C6' −58.0 (5)
O4—P1—C7—N1 −65.9 (2) C2'—C3'—C5'—C6' 176.1 (4)
O3—P1—C7—N1 −178.4 (2) C8'—C9'—C10'—C11' −1.0 (6)
O2—P1—C7—C8 −69.6 (3) P1—O4—C17—C19 144.1 (2)
O4—P1—C7—C8 168.6 (2) P1—O4—C17—C18 −94.2 (3)
O3—P1—C7—C8 56.1 (3) C9'—C8'—C13'—C12' −0.9 (5)
N1'—C7'—C8'—C13' −133.4 (3) C7'—C8'—C13'—C12' −179.6 (3)
P1'—C7'—C8'—C13' 102.7 (3) C11'—C12'—C13'—C8' 1.3 (6)
N1'—C7'—C8'—C9' 48.0 (4) C9—C8—C13—C12 2.2 (5)
P1'—C7'—C8'—C9' −76.0 (4) C7—C8—C13—C12 −178.2 (3)
P1'—O3'—C14'—C15' 89.5 (3) C9'—C10'—C11'—C12' 1.3 (6)
P1'—O3'—C14'—C16' −149.1 (2) C13'—C12'—C11'—C10' −1.5 (7)
N1—C7—C8—C9 115.1 (4) P1'—O4'—C17'—C18' −121.1 (3)
P1—C7—C8—C9 −119.8 (3) P1'—O4'—C17'—C19' 118.9 (3)
N1—C7—C8—C13 −64.4 (4) C10—C11—C12—C13 −1.4 (7)
P1—C7—C8—C13 60.7 (4) C8—C13—C12—C11 −0.9 (6)
N2—C2—C3—C5 −61.9 (4) C12—C11—C10—C9 2.4 (7)
C1—C2—C3—C5 174.2 (3) C8—C9—C10—C11 −1.0 (6)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1A···O2'i 0.86 2.07 2.913 (4) 166
N1'—H1'A···O2ii 0.86 1.98 2.833 (4) 171

Symmetry codes: (i) −x+1, y−1/2, −z+1; (ii) −x+1, y+1/2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SU2222).

References

  1. Bruker (2001). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Bruker (2007). SAINT and SMART Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  4. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  5. Joossens, J. & Van der Veken, P. (2004). J. Med. Chem. 47, 2411–2413. [DOI] [PubMed]
  6. Li, Z. G., Huang, R. Q. & Yang, Z. L. (1999). Chin. J. Appl. Chem. 2, 90–92.
  7. Liu, X. J., Chen, R. Y. & Yang, Y. Y. (2002). Chem. J. Chin. Univ. 23, 1299–1303.
  8. Senten, K., Daniels, L. & Van der Veken, P. (2003). J. Comb. Chem. 5, 336–344. [DOI] [PubMed]
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  11. Wang, Q. M., Li, Z. G., Huang, R. Q. & Cheng, J. R. (2001). Heteroat. Chem. 12, 68–72.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810051354/su2222sup1.cif

e-67-0o194-sup1.cif (33.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051354/su2222Isup2.hkl

e-67-0o194-Isup2.hkl (298.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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