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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 15;67(Pt 1):o121. doi: 10.1107/S1600536810049974

3-(2-Fluoro­phen­oxy)propanoic acid

Yao-Yuan Zhou a,*, Xiao-Bo Gu a, Meng-Jun Jiang a, Gang-Ming Cai a
PMCID: PMC3050240  PMID: 21522632

Abstract

In the title compound, C9H9FO3, the dihedral angle between the carboxyl group and the benzene ring is 79.4 (3)°. In the crystal, mol­ecules form centrosymmetric dimers through pairs of classical O—H⋯O hydrogen bonds. These are further linked by weaker C—H⋯O inter­actions, forming a three-dimensional network.

Related literature

For a related structure, see: Potrzebowski & Chruszcz (2007). For the synthesis, see: Bäurle et al. (2006).graphic file with name e-67-0o121-scheme1.jpg

Experimental

Crystal data

  • C9H9FO3

  • M r = 184.16

  • Monoclinic, Inline graphic

  • a = 13.934 (16) Å

  • b = 4.974 (5) Å

  • c = 13.098 (14) Å

  • β = 110.546 (12)°

  • V = 850.0 (16) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.12 mm−1

  • T = 153 K

  • 0.45 × 0.30 × 0.08 mm

Data collection

  • Rigaku AFC10/Saturn724+ diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) T min = 0.947, T max = 0.990

  • 5881 measured reflections

  • 1518 independent reflections

  • 1034 reflections with I > 2σ(I)

  • R int = 0.070

Refinement

  • R[F 2 > 2σ(F 2)] = 0.080

  • wR(F 2) = 0.189

  • S = 0.98

  • 1518 reflections

  • 122 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.42 e Å−3

  • Δρmin = −0.38 e Å−3

Data collection: CrystalClear (Rigaku, 2008); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810049974/sj5066sup1.cif

e-67-0o121-sup1.cif (15.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049974/sj5066Isup2.hkl

e-67-0o121-Isup2.hkl (74.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
O3—H4O⋯O2i 0.91 (7) 1.77 (7) 2.671 (6) 177 (7)
C4—H4⋯O1 0.95 2.57 3.519 (7) 176

Symmetry code: (i) Inline graphic.

Acknowledgments

This work was supported financially by the Key Medical Talents Program of Jiangsu Province (No. RC2007097).

supplementary crystallographic information

Comment

The title compound,(I), is an important intermediate in the synthesis of 8-fluorochroman-4-one (Bäurle et al., 2006). We report herein its structure (Fig.1).

The bond lengths and angles in (I) are within normal ranges (Potrzebowski & Chruszcz, 2007). The dihedral angle between the C1—C6 benzene ring and the C9/O2/O3 plane is 79.4 (3) °. In the crystal, molecules form centrosymmetric dimers through classical O3—H4O···O2 hydrogen bonds (Table 1). These are further linked by weaker C4—H4···O1 contacts forming a three-dimensional network.

Experimental

The title compound was crystallized from dichloromethane and hexane (1:1); colorless block-shaped crystals were obtained after several days.

Refinement

The crystals were not of good quality resulting in uncertainties in unit cell dimensions and other metrical data being somewhat higher than normal. Positional parameters of all the H atoms bonded to C atoms were calculated geometrically and were allowed to ride on the C atoms to which they were bonded, with C—H distances of 0.95Å (CH), 0.99Å (CH2), and with Uiso(H) =1.2Ueq of the parent atoms. The H-atom of the OH group was located in a difference map and allowed to refine freely with an isotropic displacement parameter.

Figures

Fig. 1.

Fig. 1.

A view of the title compound with the atomic numbering scheme. Displacement ellipsoids are drawn at the 50% probability level.

Crystal data

C9H9FO3 F(000) = 384
Mr = 184.16 Dx = 1.439 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2182 reflections
a = 13.934 (16) Å θ = 3.1–27.5°
b = 4.974 (5) Å µ = 0.12 mm1
c = 13.098 (14) Å T = 153 K
β = 110.546 (12)° Block, colorless
V = 850.0 (16) Å3 0.45 × 0.30 × 0.08 mm
Z = 4

Data collection

Rigaku AFC10/Saturn724+ diffractometer 1518 independent reflections
Radiation source: Rotating Anode 1034 reflections with I > 2σ(I)
graphite Rint = 0.070
Detector resolution: 28.5714 pixels mm-1 θmax = 25.5°, θmin = 3.1°
φ and ω scans h = −16→16
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) k = −6→6
Tmin = 0.947, Tmax = 0.990 l = −15→15
5881 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.080 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.189 H atoms treated by a mixture of independent and constrained refinement
S = 0.98 w = 1/[σ2(Fo2) + (0.0106P)2 + 5.690P] where P = (Fo2 + 2Fc2)/3
1518 reflections (Δ/σ)max < 0.001
122 parameters Δρmax = 0.42 e Å3
0 restraints Δρmin = −0.38 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
F1 0.1148 (2) 0.0797 (6) 0.0408 (2) 0.0401 (7)
O1 0.2551 (2) 0.4195 (6) 0.1573 (2) 0.0279 (7)
O2 0.4656 (2) 0.4357 (6) 0.1091 (3) 0.0358 (8)
O3 0.4220 (2) 0.7887 (6) −0.0035 (3) 0.0350 (8)
C8 0.3591 (3) 0.7823 (8) 0.1414 (4) 0.0279 (10)
H8A 0.2946 0.8508 0.0873 0.034*
H8B 0.3981 0.9392 0.1815 0.034*
C6 0.2124 (3) 0.2528 (8) 0.2131 (4) 0.0239 (9)
C5 0.2368 (3) 0.2465 (8) 0.3253 (3) 0.0264 (9)
H5 0.2869 0.3663 0.3705 0.032*
C1 0.1372 (3) 0.0743 (9) 0.1491 (4) 0.0281 (10)
C3 0.1149 (3) −0.1099 (9) 0.3076 (4) 0.0339 (11)
H3 0.0820 −0.2334 0.3399 0.041*
C9 0.4201 (3) 0.6507 (8) 0.0816 (4) 0.0279 (10)
C7 0.3327 (3) 0.6037 (8) 0.2214 (4) 0.0288 (10)
H7A 0.3941 0.5042 0.2677 0.035*
H7B 0.3064 0.7129 0.2691 0.035*
C4 0.1878 (3) 0.0641 (9) 0.3721 (4) 0.0301 (10)
H4 0.2050 0.0603 0.4490 0.036*
C2 0.0898 (3) −0.1050 (9) 0.1967 (4) 0.0304 (10)
H2 0.0395 −0.2255 0.1523 0.036*
H4O 0.462 (5) 0.712 (14) −0.037 (5) 0.08 (2)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
F1 0.0365 (15) 0.0424 (16) 0.0402 (16) −0.0105 (12) 0.0121 (12) 0.0004 (13)
O1 0.0313 (15) 0.0225 (15) 0.0344 (17) −0.0050 (12) 0.0170 (13) 0.0010 (13)
O2 0.0391 (18) 0.0272 (16) 0.052 (2) 0.0124 (14) 0.0289 (16) 0.0122 (15)
O3 0.0405 (18) 0.0250 (16) 0.050 (2) 0.0084 (14) 0.0291 (16) 0.0076 (15)
C8 0.029 (2) 0.0163 (19) 0.044 (3) −0.0018 (17) 0.0197 (19) −0.0018 (18)
C6 0.024 (2) 0.0166 (19) 0.036 (2) 0.0033 (15) 0.0168 (17) 0.0019 (17)
C5 0.032 (2) 0.019 (2) 0.030 (2) 0.0035 (16) 0.0134 (18) −0.0005 (17)
C1 0.024 (2) 0.025 (2) 0.037 (3) 0.0029 (17) 0.0131 (18) 0.0024 (19)
C3 0.033 (2) 0.025 (2) 0.057 (3) 0.0042 (18) 0.031 (2) 0.009 (2)
C9 0.027 (2) 0.020 (2) 0.041 (3) −0.0025 (17) 0.0175 (19) 0.0010 (19)
C7 0.034 (2) 0.017 (2) 0.043 (3) 0.0003 (17) 0.023 (2) −0.0049 (19)
C4 0.033 (2) 0.026 (2) 0.035 (2) 0.0088 (18) 0.0168 (19) 0.0066 (19)
C2 0.022 (2) 0.025 (2) 0.045 (3) 0.0006 (17) 0.0131 (19) 0.006 (2)

Geometric parameters (Å, °)

F1—C1 1.342 (5) C6—C1 1.405 (6)
O1—C6 1.372 (5) C5—C4 1.399 (6)
O1—C7 1.441 (5) C5—H5 0.9500
O2—C9 1.231 (5) C1—C2 1.381 (6)
O3—C9 1.317 (5) C3—C2 1.370 (7)
O3—H4O 0.90 (7) C3—C4 1.376 (7)
C8—C9 1.494 (6) C3—H3 0.9500
C8—C7 1.515 (6) C7—H7A 0.9900
C8—H8A 0.9900 C7—H7B 0.9900
C8—H8B 0.9900 C4—H4 0.9500
C6—C5 1.387 (6) C2—H2 0.9500
C6—O1—C7 116.8 (3) C2—C3—H3 120.0
C9—O3—H4O 113 (4) C4—C3—H3 120.0
C9—C8—C7 115.3 (3) O2—C9—O3 122.7 (4)
C9—C8—H8A 108.4 O2—C9—C8 123.8 (4)
C7—C8—H8A 108.4 O3—C9—C8 113.5 (4)
C9—C8—H8B 108.4 O1—C7—C8 106.5 (4)
C7—C8—H8B 108.4 O1—C7—H7A 110.4
H8A—C8—H8B 107.5 C8—C7—H7A 110.4
O1—C6—C5 126.0 (4) O1—C7—H7B 110.4
O1—C6—C1 115.9 (4) C8—C7—H7B 110.4
C5—C6—C1 118.2 (4) H7A—C7—H7B 108.6
C6—C5—C4 120.2 (4) C3—C4—C5 120.5 (4)
C6—C5—H5 119.9 C3—C4—H4 119.8
C4—C5—H5 119.9 C5—C4—H4 119.8
F1—C1—C2 121.3 (4) C3—C2—C1 120.3 (4)
F1—C1—C6 117.8 (4) C3—C2—H2 119.8
C2—C1—C6 120.9 (4) C1—C2—H2 119.8
C2—C3—C4 119.9 (4)
C7—O1—C6—C5 0.3 (6) C7—C8—C9—O3 165.5 (4)
C7—O1—C6—C1 −179.8 (3) C6—O1—C7—C8 −174.2 (3)
O1—C6—C5—C4 −179.4 (4) C9—C8—C7—O1 −72.7 (5)
C1—C6—C5—C4 0.7 (6) C2—C3—C4—C5 −0.1 (6)
O1—C6—C1—F1 0.8 (5) C6—C5—C4—C3 −0.2 (6)
C5—C6—C1—F1 −179.3 (3) C4—C3—C2—C1 −0.1 (6)
O1—C6—C1—C2 179.2 (4) F1—C1—C2—C3 179.0 (4)
C5—C6—C1—C2 −0.9 (6) C6—C1—C2—C3 0.6 (6)
C7—C8—C9—O2 −15.4 (6)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O3—H4O···O2i 0.91 (7) 1.77 (7) 2.671 (6) 177 (7)
C4—H4···O1ii 0.95 2.57 3.519 (7) 176

Symmetry codes: (i) −x+1, −y+1, −z; (ii) .

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ5066).

References

  1. Bäurle, S., Berger, M. & Jaroch, S. (2006). WO Patent 2006/027236.
  2. Potrzebowski, W. & Chruszcz, M. (2007). Acta Cryst. E63, o2754.
  3. Rigaku (2008). CrystalClear Rigaku Corporation, Tokyo, Japan.
  4. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810049974/sj5066sup1.cif

e-67-0o121-sup1.cif (15.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049974/sj5066Isup2.hkl

e-67-0o121-Isup2.hkl (74.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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