Abstract
In the title compound, C12H11F2N3O2, the dihedral angle between the triazole and phenyl rings is 73.74 (9)°. In the crystal, molecules are linked into chains along [010] via weak C—H⋯O and C—H⋯N hydrogen bonds.
Related literature
The title compound is an intermediate in the synthesis of rufinamide, a new anti-epilepsy drug (Herranz, 2008 ▶). For synthetic procedures, see: Abu-Orabi et al. (1989 ▶); Wang & Xie (2004 ▶). For a related structure, see: Xiao et al. (2008 ▶).
Experimental
Crystal data
C12H11F2N3O2
M r = 267.24
Monoclinic,
a = 9.4540 (19) Å
b = 10.963 (2) Å
c = 12.167 (2) Å
β = 93.21 (3)°
V = 1259.1 (4) Å3
Z = 4
Mo Kα radiation
μ = 0.12 mm−1
T = 293 K
0.30 × 0.20 × 0.20 mm
Data collection
Enraf–Nonius CAD-4 diffractometer
Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.965, T max = 0.977
3270 measured reflections
2316 independent reflections
1629 reflections with I > 2σ(I)
R int = 0.026
3 standard reflections every 200 reflections intensity decay: 1%
Refinement
R[F 2 > 2σ(F 2)] = 0.055
wR(F 2) = 0.163
S = 1.03
2316 reflections
174 parameters
H-atom parameters constrained
Δρmax = 0.32 e Å−3
Δρmin = −0.22 e Å−3
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶).
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810050014/pv2364sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810050014/pv2364Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C7—H7B⋯O1i | 0.97 | 2.47 | 3.415 (3) | 166 |
| C8—H8⋯N3i | 0.93 | 2.61 | 3.536 (3) | 172 |
Symmetry code: (i)
.
Acknowledgments
The authors thank the Center of Testing and Analysis, Nanjing University, for support.
supplementary crystallographic information
Comment
Epilepsia has been a common disease for a long time and has been on an increase year after year. Rufinamide is a new drug to cure epilepsia; it is a triazole derivative (Herranz et al., 2008). We report herein the crystal structure of the title compound which is a key intermediate in the synthesis of rufinamide. In the title compound (Fig. 1), the planes of the triazole and phenyl rings are not coplanar [dihedral angle 73.74 (9)°]. The discrete molecules are linked through weak C—H···O and C—H···N hydrogen bonds, forming one-dimensional chains along [010] direction (Fig. 2 and Tab. 1). In the structure of the title compound, the bond lengths and angles agree with the corresponding values reported for a related compound (Xiao et al., 2008).
Experimental
The title compound, was prepared by following procedures reported earlier (Wang et al., 2004; Abu-Orabi et al., 1989). To a solution of 2-(azidomethyl)-1,3-difluorobenzene (1.69 g, 10 mmol) in etanol (50 mL), ethyl propiolate (0.98 g, 10 mmol) was added and the mixture was heated under reflux for 10 h. After removing the solvent under reduced pressure the residue was dissolved and the title compound recrystallized from petroleum ether-methanol mixture (15:2), to provide crystals suitable for X-ray diffraction (yield 2.31 g, 86.3%).
Refinement
H atoms were palced in geometrically calculated position and were refined using a riding model, with C—H = 0.93, 0.96 and 0.97 Å, for aryl, methyl and methylene type H-atoms, respectively, and Uiso(H) = 1.5 and 1.2 Ueq(C) for methyl and nonmethyl H-atoms, respectively.
Figures
Fig. 1.
ORTEP view of the title compound. The dispalcement ellipsoids are drawn at 30% probability level.
Fig. 2.
A one-dimensional chain of the title compound.
Crystal data
| C12H11F2N3O2 | F(000) = 552 |
| Mr = 267.24 | Dx = 1.410 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| a = 9.4540 (19) Å | θ = 9–13° |
| b = 10.963 (2) Å | µ = 0.12 mm−1 |
| c = 12.167 (2) Å | T = 293 K |
| β = 93.21 (3)° | Block, colorless |
| V = 1259.1 (4) Å3 | 0.30 × 0.20 × 0.20 mm |
| Z = 4 |
Data collection
| Enraf–Nonius CAD-4 diffractometer | 1629 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.026 |
| graphite | θmax = 25.4°, θmin = 2.2° |
| ω/2θ scans | h = 0→11 |
| Absorption correction: ψ scan (North et al., 1968) | k = −3→13 |
| Tmin = 0.965, Tmax = 0.977 | l = −14→14 |
| 3270 measured reflections | 3 standard reflections every 200 reflections |
| 2316 independent reflections | intensity decay: 1% |
Refinement
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.055 | H-atom parameters constrained |
| wR(F2) = 0.163 | w = 1/[σ2(Fo2) + (0.0873P)2 + 0.337P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.03 | (Δ/σ)max < 0.001 |
| 2316 reflections | Δρmax = 0.32 e Å−3 |
| 174 parameters | Δρmin = −0.22 e Å−3 |
| 0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.029 (5) |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| F1 | 0.94152 (18) | 0.27880 (14) | 0.02828 (16) | 0.0890 (6) | |
| F2 | 0.78127 (17) | 0.61613 (15) | 0.22000 (14) | 0.0829 (6) | |
| O1 | 0.4165 (2) | 0.20776 (17) | 0.46337 (16) | 0.0744 (6) | |
| O2 | 0.3594 (2) | 0.39959 (17) | 0.41799 (17) | 0.0776 (6) | |
| N1 | 0.62925 (19) | 0.35347 (16) | 0.16945 (17) | 0.0537 (5) | |
| N2 | 0.6558 (3) | 0.2343 (2) | 0.1898 (2) | 0.0751 (7) | |
| N3 | 0.5829 (2) | 0.20178 (19) | 0.2728 (2) | 0.0709 (7) | |
| C1 | 0.9678 (3) | 0.3771 (2) | 0.0933 (2) | 0.0618 (7) | |
| C2 | 1.1060 (3) | 0.4031 (3) | 0.1262 (3) | 0.0733 (8) | |
| H2 | 1.1796 | 0.3538 | 0.1049 | 0.088* | |
| C3 | 1.1325 (3) | 0.5034 (3) | 0.1910 (3) | 0.0751 (8) | |
| H3 | 1.2252 | 0.5220 | 0.2146 | 0.090* | |
| C4 | 1.0243 (3) | 0.5767 (3) | 0.2217 (2) | 0.0687 (7) | |
| H4 | 1.0426 | 0.6459 | 0.2644 | 0.082* | |
| C5 | 0.8887 (3) | 0.5456 (2) | 0.1878 (2) | 0.0583 (6) | |
| C6 | 0.8534 (2) | 0.4459 (2) | 0.12140 (19) | 0.0522 (6) | |
| C7 | 0.7032 (3) | 0.4176 (2) | 0.0843 (2) | 0.0593 (7) | |
| H7B | 0.6538 | 0.4930 | 0.0658 | 0.071* | |
| H7A | 0.7023 | 0.3676 | 0.0185 | 0.071* | |
| C8 | 0.5379 (2) | 0.3966 (2) | 0.2397 (2) | 0.0524 (6) | |
| H8 | 0.5015 | 0.4753 | 0.2428 | 0.063* | |
| C9 | 0.5093 (2) | 0.3001 (2) | 0.3059 (2) | 0.0538 (6) | |
| C10 | 0.4248 (3) | 0.2941 (2) | 0.4032 (2) | 0.0577 (6) | |
| C11 | 0.2781 (4) | 0.4100 (3) | 0.5169 (3) | 0.1053 (13) | |
| H11A | 0.2056 | 0.3473 | 0.5162 | 0.126* | |
| H11B | 0.3404 | 0.3988 | 0.5822 | 0.126* | |
| C12 | 0.2137 (4) | 0.5286 (3) | 0.5186 (3) | 0.0955 (11) | |
| H12A | 0.1482 | 0.5373 | 0.4559 | 0.143* | |
| H12C | 0.2857 | 0.5901 | 0.5163 | 0.143* | |
| H12B | 0.1641 | 0.5376 | 0.5849 | 0.143* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| F1 | 0.0929 (12) | 0.0560 (10) | 0.1202 (14) | −0.0053 (8) | 0.0250 (10) | −0.0258 (9) |
| F2 | 0.0797 (11) | 0.0754 (11) | 0.0936 (12) | 0.0159 (9) | 0.0056 (9) | −0.0255 (9) |
| O1 | 0.0857 (13) | 0.0520 (11) | 0.0853 (13) | −0.0042 (9) | 0.0038 (10) | 0.0175 (10) |
| O2 | 0.0897 (14) | 0.0537 (11) | 0.0929 (14) | 0.0125 (10) | 0.0351 (11) | 0.0150 (10) |
| N1 | 0.0500 (11) | 0.0360 (10) | 0.0751 (13) | −0.0006 (8) | 0.0039 (9) | −0.0005 (9) |
| N2 | 0.0744 (15) | 0.0421 (12) | 0.1107 (18) | 0.0101 (11) | 0.0221 (14) | 0.0037 (12) |
| N3 | 0.0678 (14) | 0.0404 (12) | 0.1064 (18) | 0.0058 (10) | 0.0220 (13) | 0.0086 (12) |
| C1 | 0.0709 (17) | 0.0402 (12) | 0.0759 (16) | −0.0045 (12) | 0.0198 (13) | −0.0027 (11) |
| C2 | 0.0581 (16) | 0.0583 (17) | 0.105 (2) | 0.0027 (13) | 0.0198 (15) | 0.0076 (15) |
| C3 | 0.0602 (16) | 0.0719 (19) | 0.093 (2) | −0.0104 (15) | 0.0015 (15) | 0.0048 (16) |
| C4 | 0.0718 (17) | 0.0629 (16) | 0.0706 (17) | −0.0111 (14) | −0.0030 (13) | −0.0067 (13) |
| C5 | 0.0621 (15) | 0.0524 (14) | 0.0607 (14) | 0.0023 (12) | 0.0061 (12) | −0.0008 (11) |
| C6 | 0.0562 (13) | 0.0444 (12) | 0.0563 (13) | −0.0040 (11) | 0.0066 (10) | 0.0055 (10) |
| C7 | 0.0614 (15) | 0.0506 (14) | 0.0658 (15) | −0.0042 (11) | 0.0018 (12) | −0.0001 (12) |
| C8 | 0.0439 (12) | 0.0359 (12) | 0.0769 (16) | 0.0018 (9) | −0.0008 (11) | −0.0022 (11) |
| C9 | 0.0460 (12) | 0.0375 (12) | 0.0775 (16) | −0.0028 (10) | −0.0004 (11) | 0.0011 (11) |
| C10 | 0.0534 (13) | 0.0434 (13) | 0.0759 (16) | −0.0046 (11) | −0.0003 (12) | 0.0039 (12) |
| C11 | 0.141 (3) | 0.077 (2) | 0.103 (3) | 0.020 (2) | 0.058 (2) | 0.0216 (19) |
| C12 | 0.105 (2) | 0.095 (3) | 0.088 (2) | 0.018 (2) | 0.0283 (18) | 0.0080 (19) |
Geometric parameters (Å, °)
| F1—C1 | 1.352 (3) | C4—C5 | 1.368 (4) |
| F2—C5 | 1.352 (3) | C4—H4 | 0.9300 |
| O1—C10 | 1.202 (3) | C5—C6 | 1.390 (3) |
| O2—C10 | 1.329 (3) | C6—C7 | 1.498 (3) |
| O2—C11 | 1.468 (4) | C7—H7B | 0.9700 |
| N1—C8 | 1.335 (3) | C7—H7A | 0.9700 |
| N1—N2 | 1.351 (3) | C8—C9 | 1.366 (3) |
| N1—C7 | 1.462 (3) | C8—H8 | 0.9300 |
| N2—N3 | 1.304 (3) | C9—C10 | 1.466 (4) |
| N3—C9 | 1.356 (3) | C11—C12 | 1.437 (4) |
| C1—C2 | 1.374 (4) | C11—H11A | 0.9700 |
| C1—C6 | 1.377 (3) | C11—H11B | 0.9700 |
| C2—C3 | 1.368 (4) | C12—H12A | 0.9600 |
| C2—H2 | 0.9300 | C12—H12C | 0.9600 |
| C3—C4 | 1.369 (4) | C12—H12B | 0.9600 |
| C3—H3 | 0.9300 | ||
| C10—O2—C11 | 116.6 (2) | C6—C7—H7B | 109.3 |
| C8—N1—N2 | 110.2 (2) | N1—C7—H7A | 109.3 |
| C8—N1—C7 | 129.4 (2) | C6—C7—H7A | 109.3 |
| N2—N1—C7 | 120.2 (2) | H7B—C7—H7A | 108.0 |
| N3—N2—N1 | 107.8 (2) | N1—C8—C9 | 105.03 (19) |
| N2—N3—C9 | 108.3 (2) | N1—C8—H8 | 127.5 |
| F1—C1—C2 | 118.4 (2) | C9—C8—H8 | 127.5 |
| F1—C1—C6 | 117.4 (2) | N3—C9—C8 | 108.6 (2) |
| C2—C1—C6 | 124.2 (2) | N3—C9—C10 | 121.0 (2) |
| C3—C2—C1 | 118.3 (3) | C8—C9—C10 | 130.2 (2) |
| C3—C2—H2 | 120.8 | O1—C10—O2 | 123.7 (2) |
| C1—C2—H2 | 120.8 | O1—C10—C9 | 125.8 (2) |
| C2—C3—C4 | 120.9 (3) | O2—C10—C9 | 110.4 (2) |
| C2—C3—H3 | 119.5 | C12—C11—O2 | 108.9 (3) |
| C4—C3—H3 | 119.5 | C12—C11—H11A | 109.9 |
| C5—C4—C3 | 118.2 (3) | O2—C11—H11A | 109.9 |
| C5—C4—H4 | 120.9 | C12—C11—H11B | 109.9 |
| C3—C4—H4 | 120.9 | O2—C11—H11B | 109.9 |
| F2—C5—C4 | 118.5 (2) | H11A—C11—H11B | 108.3 |
| F2—C5—C6 | 117.3 (2) | C11—C12—H12A | 109.5 |
| C4—C5—C6 | 124.2 (2) | C11—C12—H12C | 109.5 |
| C1—C6—C5 | 114.1 (2) | H12A—C12—H12C | 109.5 |
| C1—C6—C7 | 123.8 (2) | C11—C12—H12B | 109.5 |
| C5—C6—C7 | 122.0 (2) | H12A—C12—H12B | 109.5 |
| N1—C7—C6 | 111.7 (2) | H12C—C12—H12B | 109.5 |
| N1—C7—H7B | 109.3 | ||
| C8—N1—N2—N3 | −0.5 (3) | C8—N1—C7—C6 | 100.9 (3) |
| C7—N1—N2—N3 | 176.4 (2) | N2—N1—C7—C6 | −75.2 (3) |
| N1—N2—N3—C9 | 0.0 (3) | C1—C6—C7—N1 | 99.0 (3) |
| F1—C1—C2—C3 | 179.3 (3) | C5—C6—C7—N1 | −81.2 (3) |
| C6—C1—C2—C3 | 0.1 (4) | N2—N1—C8—C9 | 0.7 (3) |
| C1—C2—C3—C4 | −0.6 (4) | C7—N1—C8—C9 | −175.8 (2) |
| C2—C3—C4—C5 | 1.4 (4) | N2—N3—C9—C8 | 0.4 (3) |
| C3—C4—C5—F2 | 178.5 (3) | N2—N3—C9—C10 | −175.6 (2) |
| C3—C4—C5—C6 | −1.9 (4) | N1—C8—C9—N3 | −0.7 (3) |
| F1—C1—C6—C5 | −179.7 (2) | N1—C8—C9—C10 | 174.9 (2) |
| C2—C1—C6—C5 | −0.5 (4) | C11—O2—C10—O1 | 2.7 (4) |
| F1—C1—C6—C7 | 0.1 (4) | C11—O2—C10—C9 | −176.0 (3) |
| C2—C1—C6—C7 | 179.4 (2) | N3—C9—C10—O1 | 3.0 (4) |
| F2—C5—C6—C1 | −179.0 (2) | C8—C9—C10—O1 | −172.1 (3) |
| C4—C5—C6—C1 | 1.4 (4) | N3—C9—C10—O2 | −178.3 (2) |
| F2—C5—C6—C7 | 1.2 (3) | C8—C9—C10—O2 | 6.6 (4) |
| C4—C5—C6—C7 | −178.4 (2) | C10—O2—C11—C12 | −179.3 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C7—H7A···F1 | 0.97 | 2.46 | 2.833 (3) | 103. |
| C7—H7B···O1i | 0.97 | 2.47 | 3.415 (3) | 166. |
| C8—H8···N3i | 0.93 | 2.61 | 3.536 (3) | 172. |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: PV2364).
References
- Abu-Orabi, S. T., Atfah, M. A., Jibril, I., Mari’i, F. M. & Ali, A. A.-S. (1989). J. Heterocycl. Chem. 26, 1461–1468.
- Enraf–Nonius (1994). CAD-4 Software Enraf–Nonius, Delft, The Netherlands.
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- Herranz, J. L. (2008). Rev. Neurol. 47, 369–373. [PubMed]
- North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810050014/pv2364sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810050014/pv2364Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


