Abstract
In the centrosymmetric binuclear title compound, [Ni2(C15H8O7)2(H2O)6], the NiII ion is in a distorted octahedral coordination geometry with O6 donors, three from three water molecules, the others from three carboxylate groups of two ligands. Extensive O—H⋯O hydrogen bonding connects the molecules into a three-dimensional supramolecular structure.
Related literature
For metal-organic coordination polymers, see: Evans et al. (1999 ▶); Li et al. (2008 ▶). For related structures, see: Wang et al. (2010 ▶); Hökelek et al. (2009 ▶).
Experimental
Crystal data
[Ni2(C15H8O7)2(H2O)6]
M r = 825.90
Monoclinic,
a = 14.4173 (9) Å
b = 9.5002 (6) Å
c = 11.2857 (7) Å
β = 92.632 (1)°
V = 1544.14 (17) Å3
Z = 2
Mo Kα radiation
μ = 1.32 mm−1
T = 298 K
0.18 × 0.12 × 0.05 mm
Data collection
Bruker SMART APEX CCD area-detector diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) ▶ T min = 0.798, T max = 0.937
7457 measured reflections
2716 independent reflections
2245 reflections with I > 2σ(I)
R int = 0.030
Refinement
R[F 2 > 2σ(F 2)] = 0.030
wR(F 2) = 0.069
S = 1.02
2716 reflections
263 parameters
10 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.28 e Å−3
Δρmin = −0.31 e Å−3
Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Sheldrick, 1998 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049718/ds2071sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049718/ds2071Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O6—H6A⋯O1i | 0.85 (1) | 1.73 (1) | 2.579 (3) | 176 (4) |
| O8—H8A⋯O10ii | 0.85 (1) | 2.41 (3) | 2.967 (3) | 124 (3) |
| O8—H8B⋯O2iii | 0.86 (1) | 2.07 (2) | 2.841 (3) | 150 (4) |
| O9—H9B⋯O3iv | 0.84 (1) | 2.14 (2) | 2.889 (2) | 149 (3) |
| O8—H8A⋯O7v | 0.85 (1) | 2.12 (2) | 2.867 (3) | 146 (3) |
| O10—H10B⋯O1vi | 0.84 (1) | 1.96 (1) | 2.770 (3) | 164 (3) |
Symmetry codes: (i)
; (ii)
; (iii)
; (iv)
; (v)
; (vi)
.
Acknowledgments
The project was supported by the Excellent Young Scholars of Higher University of Heilongjiang Province, China (1155G57), the Natural Science Foundation of Heilongjiang Province, China (B201016), the Doctoral Research Fund of Mudanjiang Teachers College, China (MSB: 200902) and the Research Fund of Mudanjiang Teachers College, China (KY: 200902).
supplementary crystallographic information
Comment
In the field of supramolecular chemistry and crystal engineering, the design and assembly of metal-organic coordination polymers with appealing structures and properties have stimulated interests of chemists (Evans et al., 1999). The hydrogen bonding interaction often leads to complicated spramolecular structure (Li et al., 2008).
As shown in Fig.1, compound I is a new binuclear neutral complex with a shuttle molecular configuration. The two Ni(II) ions locate in the middle of this molecule. Ni(II) atom is coordinated in a octahedral coordination sphere The bond lengths of Ni—O are similar with the values in those complexes containing Ni—O sgment (Wang et al., 2010). There are rich hydrogen bonding interaction O—H···O in this compound, giving a three-dimensional supramolecular structure.
Experimental
H3L4 (0.0302 g, 0.1 mmol), Ni(OAc)2.4H2O (0.0498 g, 0.2 mmol), and H2O (15 ml) was sealed in 25 ml Teflon-lined stainless steel reactor and heated to 120 oC. Green block-shaped crystals suitable for X-ray diffraction analysis were separated by filtration with the yield of 37%
Refinement
All H-atoms bound to carbon were refined using a riding model with distance C—H = 0.93 Å, Uiso = 1.2Ueq (C) for aromatic atoms. The distance of O—H of water molecule has been restrained using the 'DFIX' command as 0.85Å with the deviation of 0.01.
Figures
Fig. 1.
A view of (I) with the unique atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
Fig. 2.
A packing diagram of (I) along a axis.
Crystal data
| [Ni2(C15H8O7)2(H2O)6] | F(000) = 848 |
| Mr = 825.90 | Dx = 1.776 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 2290 reflections |
| a = 14.4173 (9) Å | θ = 2.6–25.3° |
| b = 9.5002 (6) Å | µ = 1.32 mm−1 |
| c = 11.2857 (7) Å | T = 298 K |
| β = 92.632 (1)° | Sheet, green |
| V = 1544.14 (17) Å3 | 0.18 × 0.12 × 0.05 mm |
| Z = 2 |
Data collection
| Bruker SMART APEX CCD area-detector diffractometer | 2716 independent reflections |
| Radiation source: fine-focus sealed tube | 2245 reflections with I > 2σ(I) |
| graphite | Rint = 0.030 |
| Detector resolution: 0 pixels mm-1 | θmax = 25.0°, θmin = 1.4° |
| ω scans | h = −16→17 |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | k = −7→11 |
| Tmin = 0.798, Tmax = 0.937 | l = −13→13 |
| 7457 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.069 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.02 | w = 1/[σ2(Fo2) + (0.0295P)2 + 0.7208P] where P = (Fo2 + 2Fc2)/3 |
| 2716 reflections | (Δ/σ)max = 0.001 |
| 263 parameters | Δρmax = 0.28 e Å−3 |
| 10 restraints | Δρmin = −0.31 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 1.13696 (16) | −0.0011 (3) | 0.4707 (2) | 0.0205 (6) | |
| C2 | 1.16031 (17) | 0.1901 (3) | 0.2544 (2) | 0.0217 (6) | |
| C3 | 1.23890 (17) | 0.1474 (3) | 0.3408 (2) | 0.0219 (6) | |
| C4 | 1.22697 (16) | 0.0685 (3) | 0.4442 (2) | 0.0210 (6) | |
| C5 | 1.30275 (18) | 0.0466 (3) | 0.5226 (2) | 0.0298 (7) | |
| H5 | 1.2949 | −0.0042 | 0.5918 | 0.036* | |
| C6 | 1.38951 (18) | 0.0989 (3) | 0.4998 (2) | 0.0302 (6) | |
| H6 | 1.4394 | 0.0847 | 0.5536 | 0.036* | |
| C7 | 1.40112 (17) | 0.1721 (3) | 0.3963 (2) | 0.0263 (6) | |
| C8 | 1.32712 (17) | 0.1980 (3) | 0.3173 (2) | 0.0252 (6) | |
| H8 | 1.3360 | 0.2490 | 0.2484 | 0.030* | |
| C9 | 1.62538 (18) | 0.2565 (3) | 0.2812 (2) | 0.0313 (7) | |
| H9 | 1.6411 | 0.3291 | 0.3335 | 0.038* | |
| C10 | 1.54081 (17) | 0.1884 (3) | 0.2880 (2) | 0.0237 (6) | |
| C11 | 1.51594 (18) | 0.0824 (3) | 0.2086 (2) | 0.0313 (7) | |
| H11 | 1.4585 | 0.0383 | 0.2118 | 0.038* | |
| C12 | 1.57749 (18) | 0.0433 (3) | 0.1249 (2) | 0.0306 (7) | |
| H12 | 1.5612 | −0.0281 | 0.0715 | 0.037* | |
| C13 | 1.66329 (17) | 0.1082 (3) | 0.1185 (2) | 0.0262 (6) | |
| C14 | 1.68622 (18) | 0.2165 (3) | 0.1967 (2) | 0.0321 (7) | |
| H14 | 1.7429 | 0.2624 | 0.1921 | 0.039* | |
| C15 | 1.73084 (18) | 0.0607 (3) | 0.0322 (2) | 0.0283 (6) | |
| O1 | 1.16730 (12) | 0.1605 (2) | 0.14741 (16) | 0.0346 (5) | |
| O2 | 1.09321 (11) | 0.25998 (18) | 0.29324 (15) | 0.0236 (4) | |
| O3 | 1.07414 (11) | −0.01111 (18) | 0.38727 (14) | 0.0215 (4) | |
| O4 | 1.12870 (11) | −0.04895 (19) | 0.57313 (15) | 0.0255 (4) | |
| O5 | 1.48851 (12) | 0.2300 (2) | 0.38073 (16) | 0.0327 (5) | |
| O6 | 1.70082 (14) | −0.0415 (2) | −0.03746 (19) | 0.0393 (5) | |
| O7 | 1.80790 (13) | 0.1132 (2) | 0.02540 (17) | 0.0418 (6) | |
| O8 | 0.95069 (13) | 0.0514 (2) | 0.20299 (16) | 0.0283 (4) | |
| O9 | 0.89424 (13) | 0.3188 (2) | 0.31920 (17) | 0.0267 (4) | |
| O10 | 1.00957 (13) | 0.2419 (2) | 0.52416 (15) | 0.0261 (4) | |
| Ni1 | 0.98127 (2) | 0.15487 (3) | 0.36037 (3) | 0.01905 (11) | |
| H6A | 1.7430 (19) | −0.079 (4) | −0.077 (3) | 0.074 (13)* | |
| H8A | 0.927 (2) | 0.094 (3) | 0.143 (2) | 0.062 (11)* | |
| H8B | 0.918 (2) | −0.023 (3) | 0.211 (3) | 0.102 (17)* | |
| H9B | 0.916 (2) | 0.385 (2) | 0.279 (2) | 0.066 (12)* | |
| H9A | 0.872 (2) | 0.352 (3) | 0.3811 (16) | 0.048 (10)* | |
| H10B | 1.0610 (11) | 0.275 (3) | 0.548 (2) | 0.035 (9)* | |
| H10A | 0.9937 (19) | 0.176 (3) | 0.569 (2) | 0.062 (12)* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0208 (13) | 0.0174 (13) | 0.0238 (14) | 0.0048 (11) | 0.0051 (11) | 0.0013 (11) |
| C2 | 0.0208 (13) | 0.0191 (14) | 0.0257 (14) | −0.0032 (11) | 0.0061 (11) | 0.0045 (11) |
| C3 | 0.0213 (13) | 0.0217 (14) | 0.0230 (13) | 0.0026 (11) | 0.0033 (10) | −0.0034 (11) |
| C4 | 0.0197 (13) | 0.0235 (14) | 0.0201 (13) | 0.0017 (11) | 0.0041 (10) | 0.0005 (11) |
| C5 | 0.0267 (14) | 0.0371 (17) | 0.0256 (15) | 0.0034 (13) | 0.0029 (11) | 0.0068 (13) |
| C6 | 0.0180 (13) | 0.0408 (17) | 0.0317 (15) | 0.0032 (13) | −0.0004 (11) | 0.0024 (13) |
| C7 | 0.0169 (13) | 0.0305 (16) | 0.0318 (15) | −0.0028 (12) | 0.0061 (11) | −0.0077 (13) |
| C8 | 0.0238 (14) | 0.0290 (15) | 0.0235 (14) | −0.0010 (12) | 0.0086 (11) | 0.0013 (12) |
| C9 | 0.0257 (15) | 0.0352 (17) | 0.0333 (15) | −0.0080 (13) | 0.0024 (12) | −0.0097 (13) |
| C10 | 0.0159 (12) | 0.0271 (15) | 0.0286 (14) | 0.0013 (11) | 0.0049 (11) | 0.0010 (12) |
| C11 | 0.0187 (14) | 0.0328 (16) | 0.0426 (17) | −0.0077 (13) | 0.0060 (12) | −0.0086 (14) |
| C12 | 0.0265 (15) | 0.0326 (16) | 0.0330 (15) | −0.0030 (13) | 0.0038 (12) | −0.0081 (13) |
| C13 | 0.0191 (13) | 0.0329 (16) | 0.0266 (14) | 0.0009 (12) | 0.0027 (11) | 0.0024 (12) |
| C14 | 0.0195 (14) | 0.0415 (17) | 0.0358 (16) | −0.0075 (13) | 0.0061 (12) | −0.0023 (14) |
| C15 | 0.0255 (15) | 0.0367 (17) | 0.0228 (14) | 0.0047 (13) | 0.0010 (11) | 0.0052 (13) |
| O1 | 0.0294 (10) | 0.0526 (13) | 0.0222 (10) | 0.0137 (10) | 0.0042 (8) | 0.0001 (10) |
| O2 | 0.0211 (9) | 0.0208 (10) | 0.0296 (10) | 0.0030 (8) | 0.0094 (8) | 0.0028 (8) |
| O3 | 0.0207 (9) | 0.0230 (10) | 0.0208 (9) | 0.0008 (8) | −0.0002 (7) | 0.0022 (8) |
| O4 | 0.0226 (9) | 0.0323 (11) | 0.0218 (10) | −0.0029 (8) | 0.0039 (7) | 0.0063 (8) |
| O5 | 0.0202 (9) | 0.0427 (12) | 0.0359 (11) | −0.0064 (9) | 0.0083 (8) | −0.0118 (9) |
| O6 | 0.0297 (11) | 0.0466 (14) | 0.0424 (13) | 0.0023 (10) | 0.0097 (10) | −0.0129 (11) |
| O7 | 0.0266 (11) | 0.0649 (16) | 0.0349 (12) | −0.0102 (11) | 0.0120 (9) | −0.0035 (11) |
| O8 | 0.0373 (11) | 0.0276 (11) | 0.0199 (10) | −0.0020 (10) | −0.0003 (8) | 0.0014 (9) |
| O9 | 0.0263 (10) | 0.0260 (11) | 0.0284 (11) | 0.0038 (8) | 0.0077 (9) | 0.0054 (9) |
| O10 | 0.0287 (11) | 0.0273 (11) | 0.0223 (10) | −0.0050 (9) | 0.0018 (8) | −0.0025 (9) |
| Ni1 | 0.01854 (18) | 0.02068 (18) | 0.01820 (18) | 0.00061 (15) | 0.00355 (12) | 0.00130 (14) |
Geometric parameters (Å, °)
| C1—O4 | 1.253 (3) | C10—O5 | 1.376 (3) |
| C1—O3 | 1.279 (3) | C10—C11 | 1.384 (4) |
| C1—C4 | 1.499 (3) | C11—C12 | 1.377 (4) |
| C2—O1 | 1.249 (3) | C11—H11 | 0.9300 |
| C2—O2 | 1.268 (3) | C12—C13 | 1.387 (4) |
| C2—C3 | 1.516 (3) | C12—H12 | 0.9300 |
| C3—C8 | 1.396 (3) | C13—C14 | 1.385 (4) |
| C3—C4 | 1.405 (3) | C13—C15 | 1.479 (4) |
| C4—C5 | 1.389 (3) | C14—H14 | 0.9300 |
| C5—C6 | 1.381 (4) | C15—O7 | 1.223 (3) |
| C5—H5 | 0.9300 | C15—O6 | 1.310 (3) |
| C6—C7 | 1.376 (4) | O2—Ni1 | 2.0708 (17) |
| C6—H6 | 0.9300 | O3—Ni1 | 2.0817 (17) |
| C7—C8 | 1.381 (4) | O4—Ni1i | 2.0491 (17) |
| C7—O5 | 1.393 (3) | O8—Ni1 | 2.0600 (18) |
| C8—H8 | 0.9300 | O9—Ni1 | 2.0405 (19) |
| C9—C14 | 1.378 (4) | O10—Ni1 | 2.0490 (18) |
| C9—C10 | 1.386 (4) | Ni1—O4i | 2.0491 (17) |
| C9—H9 | 0.9300 | ||
| O4—C1—O3 | 123.9 (2) | C14—C13—C15 | 120.1 (2) |
| O4—C1—C4 | 117.6 (2) | C12—C13—C15 | 120.9 (3) |
| O3—C1—C4 | 118.5 (2) | C9—C14—C13 | 120.3 (2) |
| O1—C2—O2 | 123.3 (2) | C9—C14—H14 | 119.9 |
| O1—C2—C3 | 118.1 (2) | C13—C14—H14 | 119.9 |
| O2—C2—C3 | 118.5 (2) | O7—C15—O6 | 122.7 (3) |
| C8—C3—C4 | 119.3 (2) | O7—C15—C13 | 123.0 (3) |
| C8—C3—C2 | 116.5 (2) | O6—C15—C13 | 114.3 (2) |
| C4—C3—C2 | 124.1 (2) | C2—O2—Ni1 | 119.60 (15) |
| C5—C4—C3 | 119.1 (2) | C1—O3—Ni1 | 118.68 (16) |
| C5—C4—C1 | 118.1 (2) | C1—O4—Ni1i | 128.60 (16) |
| C3—C4—C1 | 122.8 (2) | C10—O5—C7 | 120.9 (2) |
| C6—C5—C4 | 121.4 (2) | C15—O6—H6A | 113 (3) |
| C6—C5—H5 | 119.3 | Ni1—O8—H8A | 122 (2) |
| C4—C5—H5 | 119.3 | Ni1—O8—H8B | 114 (3) |
| C7—C6—C5 | 119.1 (2) | H8A—O8—H8B | 105.6 (15) |
| C7—C6—H6 | 120.4 | Ni1—O9—H9B | 117 (2) |
| C5—C6—H6 | 120.4 | Ni1—O9—H9A | 110 (2) |
| C6—C7—C8 | 121.2 (2) | H9B—O9—H9A | 109.2 (16) |
| C6—C7—O5 | 116.9 (2) | Ni1—O10—H10B | 125.5 (19) |
| C8—C7—O5 | 121.7 (2) | Ni1—O10—H10A | 102 (2) |
| C7—C8—C3 | 120.0 (2) | H10B—O10—H10A | 109.7 (16) |
| C7—C8—H8 | 120.0 | O9—Ni1—O10 | 89.55 (8) |
| C3—C8—H8 | 120.0 | O9—Ni1—O4i | 88.86 (7) |
| C14—C9—C10 | 120.0 (3) | O10—Ni1—O4i | 89.61 (7) |
| C14—C9—H9 | 120.0 | O9—Ni1—O8 | 93.61 (8) |
| C10—C9—H9 | 120.0 | O10—Ni1—O8 | 175.12 (8) |
| O5—C10—C11 | 124.5 (2) | O4i—Ni1—O8 | 86.73 (8) |
| O5—C10—C9 | 115.0 (2) | O9—Ni1—O2 | 91.72 (7) |
| C11—C10—C9 | 120.4 (2) | O10—Ni1—O2 | 90.52 (7) |
| C12—C11—C10 | 119.0 (2) | O4i—Ni1—O2 | 179.40 (7) |
| C12—C11—H11 | 120.5 | O8—Ni1—O2 | 93.11 (7) |
| C10—C11—H11 | 120.5 | O9—Ni1—O3 | 174.95 (7) |
| C11—C12—C13 | 121.3 (3) | O10—Ni1—O3 | 94.25 (7) |
| C11—C12—H12 | 119.3 | O4i—Ni1—O3 | 94.47 (7) |
| C13—C12—H12 | 119.3 | O8—Ni1—O3 | 82.82 (7) |
| C14—C13—C12 | 119.0 (2) | O2—Ni1—O3 | 84.94 (7) |
Symmetry codes: (i) −x+2, −y, −z+1.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O6—H6A···O1ii | 0.85 (1) | 1.73 (1) | 2.579 (3) | 176 (4) |
| O8—H8A···O10iii | 0.85 (1) | 2.41 (3) | 2.967 (3) | 124 (3) |
| O8—H8B···O2iv | 0.86 (1) | 2.07 (2) | 2.841 (3) | 150 (4) |
| O9—H9B···O3v | 0.84 (1) | 2.14 (2) | 2.889 (2) | 149 (3) |
| O8—H8A···O7vi | 0.85 (1) | 2.12 (2) | 2.867 (3) | 146 (3) |
| O10—H10B···O1vii | 0.84 (1) | 1.96 (1) | 2.770 (3) | 164 (3) |
Symmetry codes: (ii) −x+3, −y, −z; (iii) x, −y+1/2, z−1/2; (iv) −x+2, y−1/2, −z+1/2; (v) −x+2, y+1/2, −z+1/2; (vi) x−1, y, z; (vii) x, −y+1/2, z+1/2.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: DS2071).
References
- Bruker (2001). SAINT-Plus . Bruker AXS Inc., Madison,Wisconsin, USA.
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- Hökelek, T., Süzen, Y., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009). Acta Cryst. E65, m1015–m1016. [DOI] [PMC free article] [PubMed]
- Li, S.-L., Lan, Y.-Q., Ma, J.-F., Yang, J., Wei, G.-H., Zhang, L.-P. & Su, Z.-M. (2008). Cryst. Growth Des. 8, 675–684.
- Sheldrick, G. M. (1998). XP Bruker AXS Inc., Madison, Wisconsin, USA.
- Sheldrick, G. M. (2003). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049718/ds2071sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049718/ds2071Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


