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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 11;67(Pt 1):m60. doi: 10.1107/S1600536810049718

Bis[μ-4-(4-carb­oxy­phen­oxy)phthalato]bis­[triaqua­nickel(II)]

Xue Cai a,*
PMCID: PMC3050356  PMID: 21522579

Abstract

In the centrosymmetric binuclear title compound, [Ni2(C15H8O7)2(H2O)6], the NiII ion is in a distorted octa­hedral coordination geometry with O6 donors, three from three water mol­ecules, the others from three carboxylate groups of two ligands. Extensive O—H⋯O hydrogen bonding connects the mol­ecules into a three-dimensional supra­molecular structure.

Related literature

For metal-organic coordination polymers, see: Evans et al. (1999 ▶); Li et al. (2008 ▶). For related structures, see: Wang et al. (2010 ▶); Hökelek et al. (2009 ▶).graphic file with name e-67-00m60-scheme1.jpg

Experimental

Crystal data

  • [Ni2(C15H8O7)2(H2O)6]

  • M r = 825.90

  • Monoclinic, Inline graphic

  • a = 14.4173 (9) Å

  • b = 9.5002 (6) Å

  • c = 11.2857 (7) Å

  • β = 92.632 (1)°

  • V = 1544.14 (17) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.32 mm−1

  • T = 298 K

  • 0.18 × 0.12 × 0.05 mm

Data collection

  • Bruker SMART APEX CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2003) ▶ T min = 0.798, T max = 0.937

  • 7457 measured reflections

  • 2716 independent reflections

  • 2245 reflections with I > 2σ(I)

  • R int = 0.030

Refinement

  • R[F 2 > 2σ(F 2)] = 0.030

  • wR(F 2) = 0.069

  • S = 1.02

  • 2716 reflections

  • 263 parameters

  • 10 restraints

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.28 e Å−3

  • Δρmin = −0.31 e Å−3

Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Sheldrick, 1998 ▶); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049718/ds2071sup1.cif

e-67-00m60-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049718/ds2071Isup2.hkl

e-67-00m60-Isup2.hkl (130.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
O6—H6A⋯O1i 0.85 (1) 1.73 (1) 2.579 (3) 176 (4)
O8—H8A⋯O10ii 0.85 (1) 2.41 (3) 2.967 (3) 124 (3)
O8—H8B⋯O2iii 0.86 (1) 2.07 (2) 2.841 (3) 150 (4)
O9—H9B⋯O3iv 0.84 (1) 2.14 (2) 2.889 (2) 149 (3)
O8—H8A⋯O7v 0.85 (1) 2.12 (2) 2.867 (3) 146 (3)
O10—H10B⋯O1vi 0.84 (1) 1.96 (1) 2.770 (3) 164 (3)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic; (vi) Inline graphic.

Acknowledgments

The project was supported by the Excellent Young Scholars of Higher University of Heilongjiang Province, China (1155G57), the Natural Science Foundation of Heilongjiang Province, China (B201016), the Doctoral Research Fund of Mudanjiang Teachers College, China (MSB: 200902) and the Research Fund of Mudanjiang Teachers College, China (KY: 200902).

supplementary crystallographic information

Comment

In the field of supramolecular chemistry and crystal engineering, the design and assembly of metal-organic coordination polymers with appealing structures and properties have stimulated interests of chemists (Evans et al., 1999). The hydrogen bonding interaction often leads to complicated spramolecular structure (Li et al., 2008).

As shown in Fig.1, compound I is a new binuclear neutral complex with a shuttle molecular configuration. The two Ni(II) ions locate in the middle of this molecule. Ni(II) atom is coordinated in a octahedral coordination sphere The bond lengths of Ni—O are similar with the values in those complexes containing Ni—O sgment (Wang et al., 2010). There are rich hydrogen bonding interaction O—H···O in this compound, giving a three-dimensional supramolecular structure.

Experimental

H3L4 (0.0302 g, 0.1 mmol), Ni(OAc)2.4H2O (0.0498 g, 0.2 mmol), and H2O (15 ml) was sealed in 25 ml Teflon-lined stainless steel reactor and heated to 120 oC. Green block-shaped crystals suitable for X-ray diffraction analysis were separated by filtration with the yield of 37%

Refinement

All H-atoms bound to carbon were refined using a riding model with distance C—H = 0.93 Å, Uiso = 1.2Ueq (C) for aromatic atoms. The distance of O—H of water molecule has been restrained using the 'DFIX' command as 0.85Å with the deviation of 0.01.

Figures

Fig. 1.

Fig. 1.

A view of (I) with the unique atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

A packing diagram of (I) along a axis.

Crystal data

[Ni2(C15H8O7)2(H2O)6] F(000) = 848
Mr = 825.90 Dx = 1.776 Mg m−3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 2290 reflections
a = 14.4173 (9) Å θ = 2.6–25.3°
b = 9.5002 (6) Å µ = 1.32 mm−1
c = 11.2857 (7) Å T = 298 K
β = 92.632 (1)° Sheet, green
V = 1544.14 (17) Å3 0.18 × 0.12 × 0.05 mm
Z = 2

Data collection

Bruker SMART APEX CCD area-detector diffractometer 2716 independent reflections
Radiation source: fine-focus sealed tube 2245 reflections with I > 2σ(I)
graphite Rint = 0.030
Detector resolution: 0 pixels mm-1 θmax = 25.0°, θmin = 1.4°
ω scans h = −16→17
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) k = −7→11
Tmin = 0.798, Tmax = 0.937 l = −13→13
7457 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.069 H atoms treated by a mixture of independent and constrained refinement
S = 1.02 w = 1/[σ2(Fo2) + (0.0295P)2 + 0.7208P] where P = (Fo2 + 2Fc2)/3
2716 reflections (Δ/σ)max = 0.001
263 parameters Δρmax = 0.28 e Å−3
10 restraints Δρmin = −0.31 e Å−3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 1.13696 (16) −0.0011 (3) 0.4707 (2) 0.0205 (6)
C2 1.16031 (17) 0.1901 (3) 0.2544 (2) 0.0217 (6)
C3 1.23890 (17) 0.1474 (3) 0.3408 (2) 0.0219 (6)
C4 1.22697 (16) 0.0685 (3) 0.4442 (2) 0.0210 (6)
C5 1.30275 (18) 0.0466 (3) 0.5226 (2) 0.0298 (7)
H5 1.2949 −0.0042 0.5918 0.036*
C6 1.38951 (18) 0.0989 (3) 0.4998 (2) 0.0302 (6)
H6 1.4394 0.0847 0.5536 0.036*
C7 1.40112 (17) 0.1721 (3) 0.3963 (2) 0.0263 (6)
C8 1.32712 (17) 0.1980 (3) 0.3173 (2) 0.0252 (6)
H8 1.3360 0.2490 0.2484 0.030*
C9 1.62538 (18) 0.2565 (3) 0.2812 (2) 0.0313 (7)
H9 1.6411 0.3291 0.3335 0.038*
C10 1.54081 (17) 0.1884 (3) 0.2880 (2) 0.0237 (6)
C11 1.51594 (18) 0.0824 (3) 0.2086 (2) 0.0313 (7)
H11 1.4585 0.0383 0.2118 0.038*
C12 1.57749 (18) 0.0433 (3) 0.1249 (2) 0.0306 (7)
H12 1.5612 −0.0281 0.0715 0.037*
C13 1.66329 (17) 0.1082 (3) 0.1185 (2) 0.0262 (6)
C14 1.68622 (18) 0.2165 (3) 0.1967 (2) 0.0321 (7)
H14 1.7429 0.2624 0.1921 0.039*
C15 1.73084 (18) 0.0607 (3) 0.0322 (2) 0.0283 (6)
O1 1.16730 (12) 0.1605 (2) 0.14741 (16) 0.0346 (5)
O2 1.09321 (11) 0.25998 (18) 0.29324 (15) 0.0236 (4)
O3 1.07414 (11) −0.01111 (18) 0.38727 (14) 0.0215 (4)
O4 1.12870 (11) −0.04895 (19) 0.57313 (15) 0.0255 (4)
O5 1.48851 (12) 0.2300 (2) 0.38073 (16) 0.0327 (5)
O6 1.70082 (14) −0.0415 (2) −0.03746 (19) 0.0393 (5)
O7 1.80790 (13) 0.1132 (2) 0.02540 (17) 0.0418 (6)
O8 0.95069 (13) 0.0514 (2) 0.20299 (16) 0.0283 (4)
O9 0.89424 (13) 0.3188 (2) 0.31920 (17) 0.0267 (4)
O10 1.00957 (13) 0.2419 (2) 0.52416 (15) 0.0261 (4)
Ni1 0.98127 (2) 0.15487 (3) 0.36037 (3) 0.01905 (11)
H6A 1.7430 (19) −0.079 (4) −0.077 (3) 0.074 (13)*
H8A 0.927 (2) 0.094 (3) 0.143 (2) 0.062 (11)*
H8B 0.918 (2) −0.023 (3) 0.211 (3) 0.102 (17)*
H9B 0.916 (2) 0.385 (2) 0.279 (2) 0.066 (12)*
H9A 0.872 (2) 0.352 (3) 0.3811 (16) 0.048 (10)*
H10B 1.0610 (11) 0.275 (3) 0.548 (2) 0.035 (9)*
H10A 0.9937 (19) 0.176 (3) 0.569 (2) 0.062 (12)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0208 (13) 0.0174 (13) 0.0238 (14) 0.0048 (11) 0.0051 (11) 0.0013 (11)
C2 0.0208 (13) 0.0191 (14) 0.0257 (14) −0.0032 (11) 0.0061 (11) 0.0045 (11)
C3 0.0213 (13) 0.0217 (14) 0.0230 (13) 0.0026 (11) 0.0033 (10) −0.0034 (11)
C4 0.0197 (13) 0.0235 (14) 0.0201 (13) 0.0017 (11) 0.0041 (10) 0.0005 (11)
C5 0.0267 (14) 0.0371 (17) 0.0256 (15) 0.0034 (13) 0.0029 (11) 0.0068 (13)
C6 0.0180 (13) 0.0408 (17) 0.0317 (15) 0.0032 (13) −0.0004 (11) 0.0024 (13)
C7 0.0169 (13) 0.0305 (16) 0.0318 (15) −0.0028 (12) 0.0061 (11) −0.0077 (13)
C8 0.0238 (14) 0.0290 (15) 0.0235 (14) −0.0010 (12) 0.0086 (11) 0.0013 (12)
C9 0.0257 (15) 0.0352 (17) 0.0333 (15) −0.0080 (13) 0.0024 (12) −0.0097 (13)
C10 0.0159 (12) 0.0271 (15) 0.0286 (14) 0.0013 (11) 0.0049 (11) 0.0010 (12)
C11 0.0187 (14) 0.0328 (16) 0.0426 (17) −0.0077 (13) 0.0060 (12) −0.0086 (14)
C12 0.0265 (15) 0.0326 (16) 0.0330 (15) −0.0030 (13) 0.0038 (12) −0.0081 (13)
C13 0.0191 (13) 0.0329 (16) 0.0266 (14) 0.0009 (12) 0.0027 (11) 0.0024 (12)
C14 0.0195 (14) 0.0415 (17) 0.0358 (16) −0.0075 (13) 0.0061 (12) −0.0023 (14)
C15 0.0255 (15) 0.0367 (17) 0.0228 (14) 0.0047 (13) 0.0010 (11) 0.0052 (13)
O1 0.0294 (10) 0.0526 (13) 0.0222 (10) 0.0137 (10) 0.0042 (8) 0.0001 (10)
O2 0.0211 (9) 0.0208 (10) 0.0296 (10) 0.0030 (8) 0.0094 (8) 0.0028 (8)
O3 0.0207 (9) 0.0230 (10) 0.0208 (9) 0.0008 (8) −0.0002 (7) 0.0022 (8)
O4 0.0226 (9) 0.0323 (11) 0.0218 (10) −0.0029 (8) 0.0039 (7) 0.0063 (8)
O5 0.0202 (9) 0.0427 (12) 0.0359 (11) −0.0064 (9) 0.0083 (8) −0.0118 (9)
O6 0.0297 (11) 0.0466 (14) 0.0424 (13) 0.0023 (10) 0.0097 (10) −0.0129 (11)
O7 0.0266 (11) 0.0649 (16) 0.0349 (12) −0.0102 (11) 0.0120 (9) −0.0035 (11)
O8 0.0373 (11) 0.0276 (11) 0.0199 (10) −0.0020 (10) −0.0003 (8) 0.0014 (9)
O9 0.0263 (10) 0.0260 (11) 0.0284 (11) 0.0038 (8) 0.0077 (9) 0.0054 (9)
O10 0.0287 (11) 0.0273 (11) 0.0223 (10) −0.0050 (9) 0.0018 (8) −0.0025 (9)
Ni1 0.01854 (18) 0.02068 (18) 0.01820 (18) 0.00061 (15) 0.00355 (12) 0.00130 (14)

Geometric parameters (Å, °)

C1—O4 1.253 (3) C10—O5 1.376 (3)
C1—O3 1.279 (3) C10—C11 1.384 (4)
C1—C4 1.499 (3) C11—C12 1.377 (4)
C2—O1 1.249 (3) C11—H11 0.9300
C2—O2 1.268 (3) C12—C13 1.387 (4)
C2—C3 1.516 (3) C12—H12 0.9300
C3—C8 1.396 (3) C13—C14 1.385 (4)
C3—C4 1.405 (3) C13—C15 1.479 (4)
C4—C5 1.389 (3) C14—H14 0.9300
C5—C6 1.381 (4) C15—O7 1.223 (3)
C5—H5 0.9300 C15—O6 1.310 (3)
C6—C7 1.376 (4) O2—Ni1 2.0708 (17)
C6—H6 0.9300 O3—Ni1 2.0817 (17)
C7—C8 1.381 (4) O4—Ni1i 2.0491 (17)
C7—O5 1.393 (3) O8—Ni1 2.0600 (18)
C8—H8 0.9300 O9—Ni1 2.0405 (19)
C9—C14 1.378 (4) O10—Ni1 2.0490 (18)
C9—C10 1.386 (4) Ni1—O4i 2.0491 (17)
C9—H9 0.9300
O4—C1—O3 123.9 (2) C14—C13—C15 120.1 (2)
O4—C1—C4 117.6 (2) C12—C13—C15 120.9 (3)
O3—C1—C4 118.5 (2) C9—C14—C13 120.3 (2)
O1—C2—O2 123.3 (2) C9—C14—H14 119.9
O1—C2—C3 118.1 (2) C13—C14—H14 119.9
O2—C2—C3 118.5 (2) O7—C15—O6 122.7 (3)
C8—C3—C4 119.3 (2) O7—C15—C13 123.0 (3)
C8—C3—C2 116.5 (2) O6—C15—C13 114.3 (2)
C4—C3—C2 124.1 (2) C2—O2—Ni1 119.60 (15)
C5—C4—C3 119.1 (2) C1—O3—Ni1 118.68 (16)
C5—C4—C1 118.1 (2) C1—O4—Ni1i 128.60 (16)
C3—C4—C1 122.8 (2) C10—O5—C7 120.9 (2)
C6—C5—C4 121.4 (2) C15—O6—H6A 113 (3)
C6—C5—H5 119.3 Ni1—O8—H8A 122 (2)
C4—C5—H5 119.3 Ni1—O8—H8B 114 (3)
C7—C6—C5 119.1 (2) H8A—O8—H8B 105.6 (15)
C7—C6—H6 120.4 Ni1—O9—H9B 117 (2)
C5—C6—H6 120.4 Ni1—O9—H9A 110 (2)
C6—C7—C8 121.2 (2) H9B—O9—H9A 109.2 (16)
C6—C7—O5 116.9 (2) Ni1—O10—H10B 125.5 (19)
C8—C7—O5 121.7 (2) Ni1—O10—H10A 102 (2)
C7—C8—C3 120.0 (2) H10B—O10—H10A 109.7 (16)
C7—C8—H8 120.0 O9—Ni1—O10 89.55 (8)
C3—C8—H8 120.0 O9—Ni1—O4i 88.86 (7)
C14—C9—C10 120.0 (3) O10—Ni1—O4i 89.61 (7)
C14—C9—H9 120.0 O9—Ni1—O8 93.61 (8)
C10—C9—H9 120.0 O10—Ni1—O8 175.12 (8)
O5—C10—C11 124.5 (2) O4i—Ni1—O8 86.73 (8)
O5—C10—C9 115.0 (2) O9—Ni1—O2 91.72 (7)
C11—C10—C9 120.4 (2) O10—Ni1—O2 90.52 (7)
C12—C11—C10 119.0 (2) O4i—Ni1—O2 179.40 (7)
C12—C11—H11 120.5 O8—Ni1—O2 93.11 (7)
C10—C11—H11 120.5 O9—Ni1—O3 174.95 (7)
C11—C12—C13 121.3 (3) O10—Ni1—O3 94.25 (7)
C11—C12—H12 119.3 O4i—Ni1—O3 94.47 (7)
C13—C12—H12 119.3 O8—Ni1—O3 82.82 (7)
C14—C13—C12 119.0 (2) O2—Ni1—O3 84.94 (7)

Symmetry codes: (i) −x+2, −y, −z+1.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O6—H6A···O1ii 0.85 (1) 1.73 (1) 2.579 (3) 176 (4)
O8—H8A···O10iii 0.85 (1) 2.41 (3) 2.967 (3) 124 (3)
O8—H8B···O2iv 0.86 (1) 2.07 (2) 2.841 (3) 150 (4)
O9—H9B···O3v 0.84 (1) 2.14 (2) 2.889 (2) 149 (3)
O8—H8A···O7vi 0.85 (1) 2.12 (2) 2.867 (3) 146 (3)
O10—H10B···O1vii 0.84 (1) 1.96 (1) 2.770 (3) 164 (3)

Symmetry codes: (ii) −x+3, −y, −z; (iii) x, −y+1/2, z−1/2; (iv) −x+2, y−1/2, −z+1/2; (v) −x+2, y+1/2, −z+1/2; (vi) x−1, y, z; (vii) x, −y+1/2, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: DS2071).

References

  1. Bruker (2001). SAINT-Plus . Bruker AXS Inc., Madison,Wisconsin, USA.
  2. Bruker (2004). APEX2 Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Evans, O. R., Xiong, R., Wang, Z., Wong, G. K. & Lin, W. (1999). Angew. Chem. Int. Ed. 38, 536–538. [DOI] [PubMed]
  4. Hökelek, T., Süzen, Y., Tercan, B., Aybirdi, Ö. & Necefoğlu, H. (2009). Acta Cryst. E65, m1015–m1016. [DOI] [PMC free article] [PubMed]
  5. Li, S.-L., Lan, Y.-Q., Ma, J.-F., Yang, J., Wei, G.-H., Zhang, L.-P. & Su, Z.-M. (2008). Cryst. Growth Des. 8, 675–684.
  6. Sheldrick, G. M. (1998). XP Bruker AXS Inc., Madison, Wisconsin, USA.
  7. Sheldrick, G. M. (2003). SADABS University of Göttingen, Germany.
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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049718/ds2071sup1.cif

e-67-00m60-sup1.cif (17.6KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049718/ds2071Isup2.hkl

e-67-00m60-Isup2.hkl (130.6KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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