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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Nov 4;67(Pt 1):o17. doi: 10.1107/S1600536810044272

(E)-Isopropyl 3-(3,4-dihy­droxy­phen­yl)acrylate

Xu-Ji Shen a, Shi-Yu Liu b, Pu Jia a, Shi-Xiang Wang a, Xiao-Hui Zheng a,*
PMCID: PMC3050378  PMID: 21522677

Abstract

In the title compound, C12H14O4, a derivative of caffeic acid [(E)-3-(3,4-dihy­droxy­phen­yl)-2-propenoic acid], an intra­molecular O—H⋯O hydrogen bond forms an S(5) ring. In the crystal, inter­molecular O—H⋯O hydrogen bonds link mol­ecules into chains propagating in [110].

Related literature

For the properties of caffeate esters, see: Uwai et al. (2008 ▶); Buzzi et al. (2009 ▶); Calheiros et al.(2008 ▶); Xia et al.(2008 ▶). For the preparation of the title compound, see: Hu et al. (2006 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).graphic file with name e-67-00o17-scheme1.jpg

Experimental

Crystal data

  • C12H14O4

  • M r = 222.23

  • Triclinic, Inline graphic

  • a = 5.8830 (14) Å

  • b = 9.644 (2) Å

  • c = 11.428 (3) Å

  • α = 65.690 (2)°

  • β = 89.370 (3)°

  • γ = 81.018 (3)°

  • V = 582.6 (2) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 296 K

  • 0.31 × 0.27 × 0.19 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • 2938 measured reflections

  • 2042 independent reflections

  • 1436 reflections with I > 2σ(I)

  • R int = 0.015

Refinement

  • R[F 2 > 2σ(F 2)] = 0.045

  • wR(F 2) = 0.151

  • S = 1.05

  • 2042 reflections

  • 150 parameters

  • H-atom parameters constrained

  • Δρmax = 0.16 e Å−3

  • Δρmin = −0.13 e Å−3

Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810044272/lh5158sup1.cif

e-67-00o17-sup1.cif (16.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810044272/lh5158Isup2.hkl

e-67-00o17-Isup2.hkl (100.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
O3—H3⋯O2i 0.82 1.92 2.725 (2) 169
O4—H4⋯O3ii 0.82 2.09 2.792 (2) 143
O4—H4⋯O3 0.82 2.28 2.721 (2) 114

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

The authors are grateful for financial support from the National Natural Sciences Foundation of China (grant No. 20875074) and the Ministry of Science of China (grant No. 2009ZX09103-121).

supplementary crystallographic information

Comment

Caffeate esters have been shown to have, an inhibitory effect on lipopolysaccharide-induced nitric oxide production, antinociceptive properties, and anticancer activity (Uwai et al., 2008; Buzzi et al., 2009; Calheiros et al., 2008; Xia et al., 2008).

The molecular structure of the title compound (I) is shown in Fig. 1. An intramolecular O-H···O hydrogen bond forms an S(5) ring (Bernstein et al., 1995). In the crystal structure, intermolecular O—H···O hydrogen bonds link molecules into one-dimensional chains along [110] (see Fig .2).

Experimental

The synthesis follows the method of Hu et al. (2006). To a solution of 0.02 M caffeic acid in 120 ml of 2-propanol at room temperature, 0.2 M HCl in 2-propanol was added. After the solution had been allowed to stir and reflux for 16 h, the solvent was removed under reduced pressure. The residue was extracted with ethyl acetate three times and filtered. The filtrate was washed successively with dilute saturated aqueous NaHCO3 solution, saturated aqueous NaCl, dried over MgSO4, and evaporated. The crude products were purified by chromatography (SiO2; elution with petroleum ether-acetoacetate, 6:1 v/v). Yield 80%. X-ray quality crystals were grown from a solution of the title compound in acetone and toluene at room temperature. Spectroscopic analysis: IR(KBr, χm-1): 3464, 3310, 2973, 2926, 1675, 1629, 1599, 1529, 1370, 1276; 1H NMR (DMSO, δ, p.p.m.): 9.606 (s, 1 H), 9.146 (s, 1 H), 7.424—7.464 (d, 1 H), 7.029 (s, 1 H), 6.990—7.011 (d, 1 H), 6.742—6.762 (d, 1 H), 6.246—6.206(d, 1 H), 4.951—5.013(m, 1 H), 1.245 (s, 3 H), 1.229 (s, 3 H).

Refinement

H atoms were placed in calculated positions with O—H = 0.82Å and C—H = 0.93–0.96 Å with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(Cmethyl, O).

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I) with the atom numbering scheme, showing displacement ellipsoids at the 30% probability level.

Fig. 2.

Fig. 2.

The packing of (I), viewed along the a axis. The dashed lines show the donor-acceptor distances of O—H···O hydrogen bonds. H atoms are not shown.

Crystal data

C12H14O4 Z = 2
Mr = 222.23 F(000) = 236
Triclinic, P1 Dx = 1.267 Mg m−3
Hall symbol: -P 1 Melting point: 415 K
a = 5.8830 (14) Å Mo Kα radiation, λ = 0.71073 Å
b = 9.644 (2) Å Cell parameters from 966 reflections
c = 11.428 (3) Å θ = 2.4–26.5°
α = 65.690 (2)° µ = 0.10 mm−1
β = 89.370 (3)° T = 296 K
γ = 81.018 (3)° Block, colorless
V = 582.6 (2) Å3 0.31 × 0.27 × 0.19 mm

Data collection

Bruker APEXII CCD diffractometer 1436 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube Rint = 0.015
graphite θmax = 25.1°, θmin = 2.0°
φ and ω scans h = −7→4
2938 measured reflections k = −11→11
2042 independent reflections l = −13→13

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045 H-atom parameters constrained
wR(F2) = 0.151 w = 1/[σ2(Fo2) + (0.0822P)2 + 0.0498P] where P = (Fo2 + 2Fc2)/3
S = 1.05 (Δ/σ)max < 0.001
2042 reflections Δρmax = 0.16 e Å−3
150 parameters Δρmin = −0.13 e Å−3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.059 (11)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.2370 (2) −0.06896 (13) 0.33802 (11) 0.0681 (4)
O2 −0.0059 (3) 0.11022 (15) 0.18106 (14) 0.0914 (6)
O3 0.3441 (2) 0.87422 (13) −0.01294 (13) 0.0716 (4)
H3 0.2302 0.8794 −0.0562 0.107*
O4 0.7644 (2) 0.80457 (15) 0.11324 (14) 0.0808 (5)
H4 0.6907 0.8884 0.0653 0.121*
C1 −0.0940 (5) −0.1810 (3) 0.4336 (3) 0.1171 (10)
H1A −0.0341 −0.1952 0.5163 0.176*
H1B −0.1815 −0.2610 0.4439 0.176*
H1C −0.1918 −0.0823 0.3940 0.176*
C2 0.1019 (4) −0.1880 (2) 0.34997 (19) 0.0718 (6)
H2 0.0411 −0.1707 0.2647 0.086*
C3 0.2645 (4) −0.3381 (2) 0.4062 (2) 0.0847 (7)
H3A 0.3904 −0.3349 0.3515 0.127*
H3B 0.1847 −0.4205 0.4132 0.127*
H3C 0.3228 −0.3552 0.4900 0.127*
C4 0.1664 (3) 0.0739 (2) 0.25094 (17) 0.0612 (5)
C5 0.3170 (3) 0.1807 (2) 0.25085 (17) 0.0631 (5)
H5 0.4498 0.1430 0.3053 0.076*
C6 0.2693 (3) 0.3291 (2) 0.17549 (16) 0.0585 (5)
H6 0.1344 0.3605 0.1232 0.070*
C7 0.4000 (3) 0.45108 (19) 0.16300 (15) 0.0539 (5)
C8 0.6149 (3) 0.4221 (2) 0.22568 (17) 0.0606 (5)
H8 0.6797 0.3213 0.2795 0.073*
C9 0.7324 (3) 0.5406 (2) 0.20894 (17) 0.0639 (5)
H9 0.8752 0.5194 0.2522 0.077*
C10 0.6403 (3) 0.69140 (19) 0.12826 (16) 0.0582 (5)
C11 0.4264 (3) 0.72247 (19) 0.06532 (15) 0.0550 (5)
C12 0.3083 (3) 0.60347 (18) 0.08283 (15) 0.0550 (5)
H12 0.1645 0.6252 0.0403 0.066*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0731 (9) 0.0470 (7) 0.0691 (8) −0.0095 (6) −0.0157 (6) −0.0089 (6)
O2 0.1011 (12) 0.0557 (8) 0.0969 (10) −0.0118 (8) −0.0444 (9) −0.0104 (8)
O3 0.0749 (9) 0.0457 (7) 0.0806 (9) −0.0074 (6) −0.0259 (7) −0.0128 (6)
O4 0.0724 (9) 0.0577 (8) 0.1017 (11) −0.0153 (7) −0.0234 (8) −0.0204 (8)
C1 0.0813 (17) 0.0802 (16) 0.167 (3) −0.0154 (13) 0.0211 (17) −0.0286 (17)
C2 0.0847 (14) 0.0521 (11) 0.0697 (12) −0.0175 (10) −0.0131 (10) −0.0139 (9)
C3 0.1079 (18) 0.0533 (11) 0.0819 (14) −0.0073 (11) 0.0031 (12) −0.0192 (10)
C4 0.0665 (12) 0.0488 (10) 0.0578 (10) −0.0044 (9) −0.0117 (9) −0.0132 (8)
C5 0.0617 (11) 0.0536 (11) 0.0644 (11) −0.0074 (9) −0.0098 (9) −0.0153 (9)
C6 0.0622 (11) 0.0515 (10) 0.0549 (10) −0.0062 (8) −0.0053 (8) −0.0161 (8)
C7 0.0561 (10) 0.0501 (10) 0.0515 (9) −0.0055 (8) −0.0005 (7) −0.0180 (8)
C8 0.0613 (11) 0.0503 (10) 0.0593 (10) −0.0018 (8) −0.0065 (8) −0.0143 (8)
C9 0.0550 (10) 0.0594 (11) 0.0686 (11) −0.0038 (9) −0.0117 (9) −0.0196 (9)
C10 0.0574 (11) 0.0533 (10) 0.0610 (10) −0.0099 (8) −0.0040 (8) −0.0204 (8)
C11 0.0593 (10) 0.0459 (9) 0.0537 (9) −0.0051 (8) −0.0066 (8) −0.0157 (8)
C12 0.0539 (10) 0.0517 (10) 0.0540 (9) −0.0049 (8) −0.0072 (8) −0.0176 (8)

Geometric parameters (Å, °)

O1—C4 1.327 (2) C3—H3C 0.9600
O1—C2 1.457 (2) C4—C5 1.459 (3)
O2—C4 1.210 (2) C5—C6 1.317 (2)
O3—C11 1.3735 (19) C5—H5 0.9300
O3—H3 0.8200 C6—C7 1.462 (2)
O4—C10 1.358 (2) C6—H6 0.9300
O4—H4 0.8200 C7—C8 1.391 (3)
C1—C2 1.500 (3) C7—C12 1.395 (2)
C1—H1A 0.9600 C8—C9 1.372 (3)
C1—H1B 0.9600 C8—H8 0.9300
C1—H1C 0.9600 C9—C10 1.386 (2)
C2—C3 1.496 (3) C9—H9 0.9300
C2—H2 0.9800 C10—C11 1.384 (2)
C3—H3A 0.9600 C11—C12 1.377 (2)
C3—H3B 0.9600 C12—H12 0.9300
C4—O1—C2 118.69 (14) C6—C5—C4 121.51 (17)
C11—O3—H3 109.5 C6—C5—H5 119.2
C10—O4—H4 109.5 C4—C5—H5 119.2
C2—C1—H1A 109.5 C5—C6—C7 128.67 (18)
C2—C1—H1B 109.5 C5—C6—H6 115.7
H1A—C1—H1B 109.5 C7—C6—H6 115.7
C2—C1—H1C 109.5 C8—C7—C12 118.10 (16)
H1A—C1—H1C 109.5 C8—C7—C6 122.98 (16)
H1B—C1—H1C 109.5 C12—C7—C6 118.91 (16)
O1—C2—C3 106.18 (17) C9—C8—C7 120.69 (17)
O1—C2—C1 108.92 (17) C9—C8—H8 119.7
C3—C2—C1 112.69 (18) C7—C8—H8 119.7
O1—C2—H2 109.7 C8—C9—C10 120.69 (17)
C3—C2—H2 109.7 C8—C9—H9 119.7
C1—C2—H2 109.7 C10—C9—H9 119.7
C2—C3—H3A 109.5 O4—C10—C11 122.00 (15)
C2—C3—H3B 109.5 O4—C10—C9 118.59 (16)
H3A—C3—H3B 109.5 C11—C10—C9 119.41 (16)
C2—C3—H3C 109.5 O3—C11—C12 123.54 (15)
H3A—C3—H3C 109.5 O3—C11—C10 116.67 (15)
H3B—C3—H3C 109.5 C12—C11—C10 119.79 (15)
O2—C4—O1 123.04 (17) C11—C12—C7 121.31 (16)
O2—C4—C5 124.39 (16) C11—C12—H12 119.3
O1—C4—C5 112.57 (15) C7—C12—H12 119.3
C4—O1—C2—C3 155.38 (16) C7—C8—C9—C10 −0.6 (3)
C4—O1—C2—C1 −83.0 (2) C8—C9—C10—O4 −179.05 (16)
C2—O1—C4—O2 0.3 (3) C8—C9—C10—C11 0.8 (3)
C2—O1—C4—C5 179.43 (15) O4—C10—C11—O3 −0.4 (3)
O2—C4—C5—C6 2.5 (3) C9—C10—C11—O3 179.78 (16)
O1—C4—C5—C6 −176.64 (16) O4—C10—C11—C12 179.41 (17)
C4—C5—C6—C7 −179.87 (16) C9—C10—C11—C12 −0.4 (3)
C5—C6—C7—C8 5.7 (3) O3—C11—C12—C7 179.71 (14)
C5—C6—C7—C12 −175.59 (17) C10—C11—C12—C7 −0.1 (3)
C12—C7—C8—C9 0.1 (3) C8—C7—C12—C11 0.2 (3)
C6—C7—C8—C9 178.84 (17) C6—C7—C12—C11 −178.53 (15)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O3—H3···O2i 0.82 1.92 2.725 (2) 169.
O4—H4···O3ii 0.82 2.09 2.792 (2) 143.
O4—H4···O3 0.82 2.28 2.721 (2) 114.

Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y+2, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH5158).

References

  1. Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573.
  2. Bruker (2009). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Buzzi, F. de C., Franzoi, C. L., Antonini, G., Fracasso, M., Filho, V. C., Yunes, R. A. & Niero, R. (2009). Eur. J. Med. Chem. 44, 4596–4602. [DOI] [PubMed]
  4. Calheiros, R., Machado, N. F. L., Fiuza, S. M., Gaspar, A., Garrido, J., Milhazes, N., Borges, F. & Marques, M. P. M. (2008). J. Raman Spectrosc. 39, 95–107.
  5. Hu, W.-X., Xia, C.-N., Wang, G.-H. & Zhou, W. (2006). J. Chem. Res. 29, 586–588.
  6. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  7. Uwai, K., Osanai, Y., Imaizumi, T., Kanno, S., Takeshita, M. & Ishikawa, M. (2008). Bioorg. Med. Chem. 16, 7795–7803. [DOI] [PubMed]
  8. Xia, C.-N., Li, H.-B., Liu, F. & Hu, W.-X. (2008). Bioorg. Med. Chem. Lett. 18, 6553–6557. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810044272/lh5158sup1.cif

e-67-00o17-sup1.cif (16.2KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810044272/lh5158Isup2.hkl

e-67-00o17-Isup2.hkl (100.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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