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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 24;67(Pt 1):o210. doi: 10.1107/S1600536810052499

4-[(1-Adamant­yl)carbamo­yl]pyridinium chloride

Yingchun Wang a,*
PMCID: PMC3050416  PMID: 21522711

Abstract

In the title compound, C16H21N2O+·Cl, the amide group makes a dihedral angle of 25.9 (1)° with respect to the pyridine ring. In the crystal, inter­molecular N—H⋯Cl bonds and weak C—H⋯Cl and C—H⋯O contacts link the cations and the anions into layers parallel to the ac plane. The layers are packed along [010] by hydro­phobic inter­actions between adamantane units.

Related literature

For biomedical properties of adamantane-1-amine derivatives, see: Lees (2005); Nayyar et al. (2007). For ferroelectric properties of pyridinium salts, see: Ye et al. (2010); Zhang et al. (2010).graphic file with name e-67-0o210-scheme1.jpg

Experimental

Crystal data

  • C16H21N2O+·Cl

  • M r = 292.80

  • Monoclinic, Inline graphic

  • a = 7.117 (4) Å

  • b = 23.093 (13) Å

  • c = 11.241 (5) Å

  • β = 127.56 (2)°

  • V = 1464.5 (13) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.26 mm−1

  • T = 293 K

  • 0.20 × 0.20 × 0.20 mm

Data collection

  • Rigaku SCXmini diffractometer

  • Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) T min = 0.950, T max = 0.950

  • 14193 measured reflections

  • 3377 independent reflections

  • 2910 reflections with I > 2σ(I)

  • R int = 0.042

Refinement

  • R[F 2 > 2σ(F 2)] = 0.056

  • wR(F 2) = 0.139

  • S = 1.11

  • 3377 reflections

  • 202 parameters

  • H-atom parameters constrained

  • Δρmax = 0.23 e Å−3

  • Δρmin = −0.22 e Å−3

Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL/PC (Sheldrick, 2008); software used to prepare material for publication: SHELXTL/PC.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810052499/si2302sup1.cif

e-67-0o210-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052499/si2302Isup2.hkl

e-67-0o210-Isup2.hkl (165.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯Cl1i 0.90 2.16 3.017 (2) 160
N2—H2A⋯Cl1ii 0.90 2.50 3.293 (2) 147
C2—H2B⋯Cl1iii 0.96 2.79 3.535 (3) 136
C3—H3A⋯Cl1iv 0.96 2.78 3.536 (3) 136
C4—H4A⋯O1ii 0.96 2.35 3.203 (3) 147

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Acknowledgments

The author is grateful to the starter fund of Southeast University for financial support to buy the X-ray diffractometer.

supplementary crystallographic information

Comment

The study of amantadine and its derivatives has attracted much attention owing to their multifunction and technological applications in many areas, such as biomedicine (Lees 2005; Nayyar et al.2007). Amantadine can crystallize in different space groups owing to its randomness. As one part of our systematic research on dielectric, ferroelectric, and phase-transition materials (Ye et al. 2010; Zhang et al. 2010), we synthesize the title compound and investigated its dielectric property. In the range of 110 K to its melting point (428–432 K), the dielectric constant increases smoothly as a function of temperature. It means that this compound might not undergo a distinct structural phase transition in the measured temperature range.

The asymmetric unit of the title compound contains one protonated N- (1-adamantyl)isonicotinamide basic ion and one negative chlorine ion (Fig. 1). The torsion angles of C2—C1—C6—O1 and C2—C1—C6—N2 are 24.5 (3) ånd -157.5 (2) °, C5—C1—C6—O1 and C5—C1—C6—N2 are -151.3 (2) ° and 26.7 (3) °. Intermolecular N—H···Cl bonds and weak C—H···Cl and C—H···O contacts link cationic molecules parallel to (1 0 1) (Table 1). The layers are packed by hydrophobic interactions between adamantane units along the b-axis (Fig 2).

Experimental

Isonicotinic acid 5 g was added in thionyl chloride (50 ml), and the mixture reacted at 353 K for 5 h. Then the solvate was removed under reduced pressure, the isonicotinoyl chloride was obtained. The l-aminodiamantane hydrochloride (10 mmol) and triethylamine 2.02 g (20 mmol) dissolved in chloroform (40 ml) at 273 K, then the isonicotinoyl chloride 1.51 g (10 mmol) was added. Then the reactant mixture was stired for 7 h at room temperature and some flaxen solid appeared. After filtering the mixture, the solid was dissolved in water and was neutralized with sodium carbonate, The mixed solution was extracted by dichloromethane. The N-(1-adamantyl)isonicotinamide was obtained when the dichloromethane was evaporated under reduced pressure.

The N(1-adamantyl)isonicotinamide 2.56 g (10 mmol) was dissolved in methanol and the chlorhydric acid 1 ml (12 mmol/ml) was added. The crystals suitable for structure determination were grown by slow evaporation of the filter solution at room temperature.

Refinement

Positional parameters of all H atoms were calculated geometrically and were allowed to ride on the C and N atoms to which they are bonded, with N–H and C–H distances 0.90 Å and 0.96 Å, respectively. The isotropic displace ment parameters of the H atoms were refined freely with Uiso(H) = 1.7Ueq(N), and the Uiso(H) at carbon atoms range between 1.1 and 1.6Ueq(C).

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound, with the atomic numbering scheme. Displacement ellipsoids are drawn at the 30% probability level.

Fig. 2.

Fig. 2.

A view of a packing section of the title compound, stacking along the b axis. Dashed lines indicate hydrogen bonds.

Crystal data

C16H21N2O+·Cl F(000) = 624
Mr = 292.80 Dx = 1.328 Mg m3
Monoclinic, P21/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybc Cell parameters from 3642 reflections
a = 7.117 (4) Å θ = 2.9–27.6°
b = 23.093 (13) Å µ = 0.26 mm1
c = 11.241 (5) Å T = 293 K
β = 127.56 (2)° Prism, colourless
V = 1464.5 (13) Å3 0.20 × 0.20 × 0.20 mm
Z = 4

Data collection

Rigaku SCXmini diffractometer 3377 independent reflections
Radiation source: fine-focus sealed tube 2910 reflections with I > 2σ(I)
graphite Rint = 0.042
Detector resolution: 13.6612 pixels mm-1 θmax = 27.6°, θmin = 2.9°
ω scans h = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) k = −30→30
Tmin = 0.950, Tmax = 0.950 l = −14→14
14193 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139 H-atom parameters constrained
S = 1.11 w = 1/[σ2(Fo2) + (0.0598P)2 + 0.5955P] where P = (Fo2 + 2Fc2)/3
3377 reflections (Δ/σ)max = 0.041
202 parameters Δρmax = 0.23 e Å3
0 restraints Δρmin = −0.22 e Å3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cl1 0.13642 (10) −0.01867 (2) 0.85883 (6) 0.03808 (17)
O1 0.3301 (3) −0.12489 (9) 0.51605 (18) 0.0531 (5)
N1 0.6627 (4) −0.03832 (8) 0.2831 (2) 0.0406 (5)
H1A 0.6865 −0.0228 0.2198 0.070 (9)*
N2 0.7203 (3) −0.11813 (8) 0.71977 (19) 0.0345 (4)
H2A 0.8612 −0.1036 0.7512 0.059 (8)*
C1 0.5926 (4) −0.08374 (9) 0.4772 (2) 0.0307 (4)
C2 0.4096 (4) −0.05633 (10) 0.3459 (2) 0.0375 (5)
H2B 0.2555 −0.0532 0.3221 0.050 (7)*
C3 0.4491 (4) −0.03368 (10) 0.2503 (3) 0.0412 (5)
H3A 0.3237 −0.0144 0.1599 0.053 (8)*
C4 0.8423 (4) −0.06503 (10) 0.4063 (3) 0.0426 (5)
H4A 0.9931 −0.0680 0.4254 0.053 (8)*
C5 0.8118 (4) −0.08820 (10) 0.5065 (3) 0.0384 (5)
H5A 0.9410 −0.1072 0.5959 0.050 (7)*
C6 0.5359 (4) −0.11061 (10) 0.5753 (2) 0.0349 (5)
C7 0.7100 (3) −0.14894 (8) 0.8312 (2) 0.0286 (4)
C8 0.6137 (4) −0.21041 (9) 0.7764 (2) 0.0381 (5)
H8A 0.4549 −0.2086 0.6847 0.043 (7)*
H8B 0.7099 −0.2307 0.7568 0.059 (8)*
C9 0.9648 (4) −0.15297 (10) 0.9762 (2) 0.0404 (5)
H9A 1.0617 −0.1731 0.9569 0.057 (8)*
H9B 1.0284 −0.1147 1.0111 0.044 (7)*
C10 0.5588 (4) −0.11689 (9) 0.8641 (3) 0.0376 (5)
H10A 0.6192 −0.0784 0.8989 0.050 (7)*
H10B 0.3989 −0.1139 0.7738 0.046 (7)*
C11 0.6166 (4) −0.24278 (9) 0.8968 (3) 0.0415 (5)
H11A 0.5551 −0.2811 0.8615 0.057 (8)*
C12 0.4621 (4) −0.21057 (10) 0.9256 (3) 0.0427 (5)
H12A 0.3033 −0.2080 0.8341 0.060 (8)*
H12B 0.4575 −0.2313 0.9978 0.060 (8)*
C13 0.5605 (4) −0.15005 (10) 0.9832 (3) 0.0403 (5)
H13A 0.4650 −0.1300 1.0037 0.064 (8)*
C14 0.8703 (5) −0.24643 (10) 1.0405 (3) 0.0463 (6)
H14A 0.8734 −0.2675 1.1153 0.056 (8)*
H14B 0.9668 −0.2668 1.0211 0.067 (9)*
C15 0.9674 (4) −0.18568 (11) 1.0960 (2) 0.0419 (5)
H15A 1.1271 −0.1879 1.1867 0.053 (7)*
C16 0.8150 (5) −0.15348 (11) 1.1268 (3) 0.0450 (6)
H16A 0.8771 −0.1152 1.1629 0.050 (7)*
H16B 0.8180 −0.1735 1.2028 0.059 (8)*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cl1 0.0399 (3) 0.0436 (3) 0.0357 (3) −0.0034 (2) 0.0256 (3) 0.0040 (2)
O1 0.0297 (9) 0.0891 (13) 0.0340 (9) −0.0059 (8) 0.0160 (7) 0.0178 (8)
N1 0.0554 (12) 0.0444 (10) 0.0346 (10) −0.0066 (9) 0.0340 (10) 0.0014 (8)
N2 0.0293 (9) 0.0497 (10) 0.0246 (8) −0.0055 (7) 0.0166 (8) 0.0054 (7)
C1 0.0320 (10) 0.0365 (10) 0.0262 (10) −0.0031 (8) 0.0189 (9) 0.0004 (8)
C2 0.0336 (11) 0.0460 (12) 0.0328 (11) 0.0025 (9) 0.0203 (10) 0.0092 (9)
C3 0.0462 (13) 0.0443 (12) 0.0306 (11) −0.0007 (10) 0.0220 (11) 0.0076 (9)
C4 0.0419 (13) 0.0553 (14) 0.0440 (13) −0.0019 (10) 0.0331 (12) −0.0004 (10)
C5 0.0339 (11) 0.0497 (13) 0.0333 (11) 0.0041 (9) 0.0213 (10) 0.0064 (9)
C6 0.0307 (11) 0.0459 (12) 0.0296 (11) −0.0006 (8) 0.0191 (9) 0.0068 (8)
C7 0.0291 (10) 0.0354 (10) 0.0229 (9) −0.0015 (8) 0.0166 (8) 0.0036 (7)
C8 0.0458 (13) 0.0383 (12) 0.0332 (11) −0.0039 (9) 0.0257 (11) −0.0036 (9)
C9 0.0295 (11) 0.0546 (14) 0.0319 (11) −0.0049 (9) 0.0160 (10) 0.0079 (10)
C10 0.0453 (13) 0.0372 (11) 0.0369 (12) 0.0088 (9) 0.0286 (11) 0.0078 (9)
C11 0.0527 (14) 0.0303 (11) 0.0400 (12) −0.0070 (9) 0.0274 (11) 0.0006 (9)
C12 0.0372 (12) 0.0569 (14) 0.0361 (12) −0.0047 (10) 0.0233 (11) 0.0091 (10)
C13 0.0492 (14) 0.0478 (13) 0.0382 (12) 0.0093 (10) 0.0340 (12) 0.0066 (9)
C14 0.0523 (15) 0.0427 (13) 0.0482 (14) 0.0117 (10) 0.0328 (13) 0.0168 (10)
C15 0.0294 (11) 0.0583 (14) 0.0267 (11) −0.0015 (9) 0.0112 (9) 0.0122 (9)
C16 0.0571 (15) 0.0491 (14) 0.0297 (12) −0.0087 (11) 0.0270 (12) −0.0011 (9)

Geometric parameters (Å, °)

O1—C6 1.228 (3) C9—C15 1.535 (3)
N1—C3 1.332 (3) C9—H9A 0.9600
N1—C4 1.332 (3) C9—H9B 0.9601
N1—H1A 0.9000 C10—C13 1.536 (3)
N2—C6 1.339 (3) C10—H10A 0.9602
N2—C7 1.480 (2) C10—H10B 0.9599
N2—H2A 0.9000 C11—C12 1.517 (3)
C1—C5 1.388 (3) C11—C14 1.523 (4)
C1—C2 1.390 (3) C11—H11A 0.9599
C1—C6 1.519 (3) C12—C13 1.520 (3)
C2—C3 1.369 (3) C12—H12A 0.9599
C2—H2B 0.9601 C12—H12B 0.9600
C3—H3A 0.9599 C13—C16 1.526 (3)
C4—C5 1.379 (3) C13—H13A 0.9601
C4—H4A 0.9601 C14—C15 1.520 (4)
C5—H5A 0.9599 C14—H14A 0.9601
C7—C10 1.526 (3) C14—H14B 0.9600
C7—C8 1.533 (3) C15—C16 1.518 (3)
C7—C9 1.533 (3) C15—H15A 0.9600
C8—C11 1.535 (3) C16—H16A 0.9599
C8—H8A 0.9600 C16—H16B 0.9599
C8—H8B 0.9600
C3—N1—C4 122.33 (19) C7—C10—C13 109.73 (17)
C3—N1—H1A 118.9 C7—C10—H10A 109.9
C4—N1—H1A 118.8 C13—C10—H10A 110.0
C6—N2—C7 124.82 (18) C7—C10—H10B 109.6
C6—N2—H2A 117.5 C13—C10—H10B 109.4
C7—N2—H2A 117.7 H10A—C10—H10B 108.2
C5—C1—C2 118.42 (19) C12—C11—C14 110.2 (2)
C5—C1—C6 123.72 (18) C12—C11—C8 109.11 (19)
C2—C1—C6 117.73 (19) C14—C11—C8 109.4 (2)
C3—C2—C1 120.0 (2) C12—C11—H11A 109.5
C3—C2—H2B 119.9 C14—C11—H11A 109.5
C1—C2—H2B 120.1 C8—C11—H11A 109.1
N1—C3—C2 119.8 (2) C11—C12—C13 109.63 (18)
N1—C3—H3A 119.8 C11—C12—H12A 109.6
C2—C3—H3A 120.3 C13—C12—H12A 109.5
N1—C4—C5 120.0 (2) C11—C12—H12B 109.8
N1—C4—H4A 119.9 C13—C12—H12B 110.1
C5—C4—H4A 120.1 H12A—C12—H12B 108.2
C4—C5—C1 119.4 (2) C12—C13—C16 110.15 (19)
C4—C5—H5A 120.3 C12—C13—C10 109.30 (19)
C1—C5—H5A 120.2 C16—C13—C10 108.74 (19)
O1—C6—N2 125.90 (19) C12—C13—H13A 109.7
O1—C6—C1 118.23 (19) C16—C13—H13A 109.2
N2—C6—C1 115.83 (18) C10—C13—H13A 109.8
N2—C7—C10 112.20 (17) C15—C14—C11 109.43 (18)
N2—C7—C8 110.26 (16) C15—C14—H14A 110.2
C10—C7—C8 109.73 (17) C11—C14—H14A 109.7
N2—C7—C9 107.00 (16) C15—C14—H14B 109.6
C10—C7—C9 108.87 (18) C11—C14—H14B 109.7
C8—C7—C9 108.68 (17) H14A—C14—H14B 108.2
C11—C8—C7 109.54 (17) C16—C15—C14 109.7 (2)
C11—C8—H8A 110.0 C16—C15—C9 109.31 (19)
C7—C8—H8A 109.7 C14—C15—C9 109.5 (2)
C11—C8—H8B 109.7 C16—C15—H15A 109.4
C7—C8—H8B 109.7 C14—C15—H15A 109.5
H8A—C8—H8B 108.2 C9—C15—H15A 109.4
C15—C9—C7 109.69 (17) C15—C16—C13 109.68 (19)
C15—C9—H9A 109.6 C15—C16—H16A 109.8
C7—C9—H9A 109.6 C13—C16—H16A 110.1
C15—C9—H9B 110.1 C15—C16—H16B 109.6
C7—C9—H9B 109.6 C13—C16—H16B 109.5
H9A—C9—H9B 108.2 H16A—C16—H16B 108.1
C5—C1—C2—C3 −1.1 (3) C8—C7—C9—C15 −59.8 (2)
C6—C1—C2—C3 −177.1 (2) N2—C7—C10—C13 −178.48 (17)
C4—N1—C3—C2 0.7 (3) C8—C7—C10—C13 58.6 (2)
C1—C2—C3—N1 0.4 (3) C9—C7—C10—C13 −60.2 (2)
C3—N1—C4—C5 −1.1 (4) C7—C8—C11—C12 60.1 (2)
N1—C4—C5—C1 0.4 (4) C7—C8—C11—C14 −60.6 (2)
C2—C1—C5—C4 0.6 (3) C14—C11—C12—C13 58.8 (2)
C6—C1—C5—C4 176.4 (2) C8—C11—C12—C13 −61.3 (2)
C7—N2—C6—O1 4.6 (4) C11—C12—C13—C16 −58.4 (2)
C7—N2—C6—C1 −173.26 (18) C11—C12—C13—C10 61.0 (2)
C5—C1—C6—O1 −151.3 (2) C7—C10—C13—C12 −59.5 (2)
C2—C1—C6—O1 24.5 (3) C7—C10—C13—C16 60.8 (2)
C5—C1—C6—N2 26.7 (3) C12—C11—C14—C15 −59.6 (2)
C2—C1—C6—N2 −157.5 (2) C8—C11—C14—C15 60.4 (3)
C6—N2—C7—C10 −66.8 (3) C11—C14—C15—C16 59.8 (2)
C6—N2—C7—C8 55.8 (3) C11—C14—C15—C9 −60.2 (3)
C6—N2—C7—C9 173.9 (2) C7—C9—C15—C16 −59.9 (2)
N2—C7—C8—C11 177.02 (18) C7—C9—C15—C14 60.2 (3)
C10—C7—C8—C11 −58.9 (2) C14—C15—C16—C13 −59.6 (2)
C9—C7—C8—C11 60.0 (2) C9—C15—C16—C13 60.6 (2)
N2—C7—C9—C15 −178.89 (18) C12—C13—C16—C15 59.0 (2)
C10—C7—C9—C15 59.6 (2) C10—C13—C16—C15 −60.8 (2)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H1A···Cl1i 0.90 2.16 3.017 (2) 160.
N2—H2A···Cl1ii 0.90 2.50 3.293 (2) 147.
C2—H2B···Cl1iii 0.96 2.79 3.535 (3) 136.
C3—H3A···Cl1iv 0.96 2.78 3.536 (3) 136.
C4—H4A···O1ii 0.96 2.35 3.203 (3) 147.

Symmetry codes: (i) −x+1, −y, −z+1; (ii) x+1, y, z; (iii) −x, −y, −z+1; (iv) x, y, z−1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SI2302).

References

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  3. Rigaku (2005). CrystalClear Rigaku Corporation, Tokyo, Japan.
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  5. Ye, H.-Y., Chen, L.-Z. & Xiong, R.-G. (2010). Acta Cryst. B66, 387–395. [DOI] [PubMed]
  6. Zhang, W., Ye, H. Y., Cai, H. L., Ge, J. Z., Xiong, R. G. & Huang, S. P. D. (2010). J. Am. Chem. Soc. 132, 7300–7302. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810052499/si2302sup1.cif

e-67-0o210-sup1.cif (19.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052499/si2302Isup2.hkl

e-67-0o210-Isup2.hkl (165.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

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