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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2010 Dec 18;67(Pt 1):m91. doi: 10.1107/S1600536810052414

Bis{(E)-2-[(2-chloro-3-pyrid­yl)imino­meth­yl]-6-meth­oxy­phenolato-κ2 N,O 1}copper(II)

Wen-Kui Dong a,*, Yuan Wang a, Jian-Chao Wu a, Shou-Ting Zhang a
PMCID: PMC3050418  PMID: 21522606

Abstract

In the title mononuclear copper(II) complex, [Cu(C13H10ClN2O2)2], the CuII ion, lying on an inversion center, is four-coordinated in a trans-CuN2O2 square-planar geometry by two phenolate O and two imino N atoms from two symmetry-related N,O-bidentate Schiff base ligands. The shortest Cu⋯Cu distance is 7.5743 (9) Å. However, there are weak intra­molecular electrostatic inter­actions between the Cu atom and the Cl atom of the ligand, with a Cu⋯Cl distance of 3.3845 (9) Å.

Related literature

For the synthesis and related crystal strcutures, see: Dong et al. (2009 ▶, 2010 ▶); Ding et al. (2009 ▶).graphic file with name e-67-00m91-scheme1.jpg

Experimental

Crystal data

  • [Cu(C13H10ClN2O2)2]

  • M r = 586.90

  • Monoclinic, Inline graphic

  • a = 21.242 (2) Å

  • b = 7.5743 (9) Å

  • c = 16.141 (2) Å

  • β = 97.652 (1)°

  • V = 2573.9 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.10 mm−1

  • T = 298 K

  • 0.18 × 0.16 × 0.11 mm

Data collection

  • Siemens SMART 1000 CCE diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.827, T max = 0.889

  • 6295 measured reflections

  • 2262 independent reflections

  • 1651 reflections with I > 2σ(I)

  • R int = 0.034

Refinement

  • R[F 2 > 2σ(F 2)] = 0.035

  • wR(F 2) = 0.075

  • S = 1.01

  • 2262 reflections

  • 170 parameters

  • H-atom parameters constrained

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.29 e Å−3

Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810052414/om2379sup1.cif

e-67-00m91-sup1.cif (17.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052414/om2379Isup2.hkl

e-67-00m91-Isup2.hkl (111.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

This work was supported by the Foundation of the Education Department of Gansu Province (0904–11), which is gratefully acknowledged.

supplementary crystallographic information

Comment

The centrosymmetric structure of the title complex is shown in Fig. 1. In the title complex all bond lengths are in normal ranges. The CuII ion, lying on the inversion centre, is four-coordinated in a trans-CuN2O2 square-planar geometry, with two phenolate O and two imino N atoms from two N,O-bidentate Schiff-base ligand (HL) (Dong et al., 2009; Ding et al., 2009). The shortest Cu···Cu distance is 7.5743 (9) Å. However, there are weak intramolecular electrostatic interactions between the Cu and Cl of the ligand, with Cu1··· Cl1 distance of 3.3845 (9) Å.

Experimental

(E)-2-((2-chloropyridin-3-ylimino)methyl)-6-methoxyphenol (HL) was prepared according to previously reported procedure (Dong et al., 2010; Ding et al., 2009). To a warm pale-yellow ethanol solution (4 ml) of 3-methoxysalicylaldehyde (152.2 mg, 1.00 mmol), colorless ethanol solution (4 ml) of 3-amino-2-chloropyridine (128.6 mg, 1.00 mmol) was added dropwise, and the color of the mixture turned orange. The solution was maintained under reflux for 24 h, and a saffron yellow powder product was obtained. It was filtered off, washed with ethanol and ethanol-hexane (1:4, V/V), respectively, and then dried in vacuo yielding 245.3 mg powder. Yield, 93.38%. m.p. 397–398 K. Anal. Calcd. for C13H11ClN2O2 (%): C, 59.44; H, 4.22; N, 10.66. Found: C, 59.40; H, 4.18; N, 10.71.

A pale-blue ethanol solution (3 ml) of CuII acetate monohydrate (2.9 mg, 0.015 mmol) was added dropwise to a pale-yellow acetone solution (3 ml) of HL (7.0 mg, 0.027 mmol) at room temperature. The color of the mixing solution turned to yellow immediately, then turned to brown slowly and the filtrate was allowed to stand at room temperature for about three weeks. The solvent was partially evaporated and obtained green single crystals suit for X-ray crystallographic analysis. Anal. Calcd. for [Cu(L)2] (C26H20Cl2CuN4O4) (%): C, 53.21; H, 3.43; N, 9.55; Cu, 10.83. Found: C, 53.24; H, 3.46; N, 9.50, Cu, 10.79.

Refinement

H atoms were placed in calculated positions and non-H atoms were refined anisotropically. H atoms were treated as riding atoms with distances C—H = 0.96 Å (CH3) and 0.93 Å (CH). The isotropic displacement parameters for all H atoms were set equal to 1.2 or 1.5 Ueq of the carrier atom.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title complex with the atom numbering scheme [Symmetry code: #1 = -x + 1,-y + 1,-z]. Displacement ellipsoids for non-hydrogen atoms are drawn at the 30% probability level.

Crystal data

[Cu(C13H10ClN2O2)2] F(000) = 1196
Mr = 586.90 Dx = 1.515 Mg m−3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 1824 reflections
a = 21.242 (2) Å θ = 2.9–25.2°
b = 7.5743 (9) Å µ = 1.10 mm−1
c = 16.141 (2) Å T = 298 K
β = 97.652 (1)° Block, brown
V = 2573.9 (5) Å3 0.18 × 0.16 × 0.11 mm
Z = 4

Data collection

Bruker SMART 1000 diffractometer 2262 independent reflections
Radiation source: fine-focus sealed tube 1651 reflections with I > 2σ(I)
graphite Rint = 0.034
φ and ω scans θmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) h = −20→25
Tmin = 0.827, Tmax = 0.889 k = −8→8
6295 measured reflections l = −19→17

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075 H-atom parameters constrained
S = 1.01 w = 1/[σ2(Fo2) + (0.0306P)2] where P = (Fo2 + 2Fc2)/3
2262 reflections (Δ/σ)max < 0.001
170 parameters Δρmax = 0.24 e Å−3
0 restraints Δρmin = −0.29 e Å−3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Cu1 0.5000 0.5000 0.0000 0.04162 (16)
Cl1 0.41342 (4) 0.44977 (10) 0.15993 (6) 0.0749 (3)
N1 0.53184 (10) 0.3389 (3) 0.09230 (13) 0.0415 (5)
N2 0.40093 (12) 0.1120 (3) 0.17745 (16) 0.0590 (7)
O1 0.56672 (8) 0.6625 (2) 0.03158 (12) 0.0494 (5)
O2 0.65231 (10) 0.9115 (3) 0.03223 (14) 0.0662 (6)
C1 0.58981 (13) 0.3453 (4) 0.13165 (17) 0.0452 (7)
H1 0.6021 0.2534 0.1685 0.054*
C2 0.63603 (12) 0.4787 (4) 0.12382 (16) 0.0442 (7)
C3 0.62132 (12) 0.6322 (4) 0.07655 (16) 0.0426 (7)
C4 0.67016 (13) 0.7650 (4) 0.07845 (18) 0.0495 (7)
C5 0.72880 (14) 0.7374 (4) 0.12438 (19) 0.0586 (8)
H5 0.7603 0.8228 0.1244 0.070*
C6 0.74167 (15) 0.5833 (4) 0.1708 (2) 0.0642 (9)
H6 0.7815 0.5668 0.2015 0.077*
C7 0.69649 (14) 0.4579 (4) 0.17153 (18) 0.0572 (8)
H7 0.7052 0.3568 0.2037 0.069*
C8 0.69847 (17) 1.0482 (4) 0.0302 (2) 0.0785 (11)
H8A 0.7120 1.0891 0.0860 0.118*
H8B 0.6801 1.1444 −0.0034 0.118*
H8C 0.7344 1.0028 0.0066 0.118*
C9 0.43771 (13) 0.2320 (4) 0.14983 (17) 0.0476 (7)
C10 0.49353 (13) 0.1971 (3) 0.11672 (16) 0.0427 (7)
C11 0.50962 (14) 0.0223 (4) 0.10883 (17) 0.0516 (7)
H11 0.5457 −0.0086 0.0853 0.062*
C12 0.47121 (16) −0.1066 (4) 0.13646 (19) 0.0637 (9)
H12 0.4813 −0.2255 0.1321 0.076*
C13 0.41833 (17) −0.0569 (4) 0.1702 (2) 0.0647 (9)
H13 0.3931 −0.1446 0.1891 0.078*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Cu1 0.0330 (3) 0.0411 (3) 0.0496 (3) −0.0060 (2) 0.0010 (2) 0.0007 (2)
Cl1 0.0740 (6) 0.0506 (5) 0.1082 (7) −0.0009 (4) 0.0415 (5) −0.0033 (4)
N1 0.0370 (13) 0.0402 (13) 0.0472 (13) −0.0072 (10) 0.0046 (11) −0.0018 (10)
N2 0.0575 (16) 0.0524 (17) 0.0704 (18) −0.0181 (14) 0.0207 (14) −0.0051 (14)
O1 0.0380 (11) 0.0423 (11) 0.0642 (12) −0.0088 (9) −0.0065 (10) 0.0060 (9)
O2 0.0574 (14) 0.0533 (13) 0.0852 (16) −0.0221 (11) −0.0004 (12) 0.0056 (12)
C1 0.0438 (17) 0.0451 (17) 0.0461 (17) −0.0024 (14) 0.0034 (14) 0.0014 (13)
C2 0.0347 (15) 0.0508 (18) 0.0458 (15) −0.0041 (14) 0.0009 (12) −0.0008 (14)
C3 0.0342 (15) 0.0491 (17) 0.0437 (17) −0.0069 (13) 0.0028 (14) −0.0073 (14)
C4 0.0444 (18) 0.0483 (19) 0.0557 (19) −0.0108 (14) 0.0059 (15) −0.0065 (15)
C5 0.0393 (18) 0.065 (2) 0.070 (2) −0.0177 (15) 0.0003 (16) −0.0121 (17)
C6 0.0391 (19) 0.077 (2) 0.072 (2) −0.0053 (17) −0.0096 (16) −0.0098 (19)
C7 0.0467 (19) 0.063 (2) 0.0586 (19) −0.0025 (15) −0.0063 (15) 0.0012 (15)
C8 0.082 (3) 0.060 (2) 0.095 (3) −0.0335 (19) 0.016 (2) −0.0060 (19)
C9 0.0486 (18) 0.0405 (17) 0.0553 (18) −0.0050 (14) 0.0125 (15) −0.0034 (14)
C10 0.0403 (17) 0.0442 (17) 0.0425 (16) −0.0093 (13) 0.0016 (13) 0.0005 (13)
C11 0.0503 (18) 0.0469 (18) 0.0583 (18) −0.0059 (15) 0.0096 (14) −0.0011 (15)
C12 0.073 (2) 0.0439 (19) 0.075 (2) −0.0104 (17) 0.0156 (19) −0.0005 (17)
C13 0.075 (2) 0.047 (2) 0.076 (2) −0.0255 (17) 0.022 (2) −0.0016 (16)

Geometric parameters (Å, °)

Cu1—O1i 1.8951 (17) C4—C5 1.378 (4)
Cu1—O1 1.8951 (17) C5—C6 1.395 (4)
Cu1—N1 1.974 (2) C5—H5 0.9300
Cu1—N1i 1.974 (2) C6—C7 1.351 (4)
Cl1—C9 1.743 (3) C6—H6 0.9300
N1—C1 1.309 (3) C7—H7 0.9300
N1—C10 1.434 (3) C8—H8A 0.9600
N2—C9 1.314 (3) C8—H8B 0.9600
N2—C13 1.341 (4) C8—H8C 0.9600
O1—C3 1.304 (3) C9—C10 1.389 (4)
O2—C4 1.363 (3) C10—C11 1.378 (4)
O2—C8 1.429 (3) C11—C12 1.384 (4)
C1—C2 1.426 (3) C11—H11 0.9300
C1—H1 0.9300 C12—C13 1.365 (4)
C2—C3 1.403 (4) C12—H12 0.9300
C2—C7 1.416 (4) C13—H13 0.9300
C3—C4 1.443 (4)
O1i—Cu1—O1 180.00 (14) C7—C6—C5 120.3 (3)
O1i—Cu1—N1 88.30 (8) C7—C6—H6 119.9
O1—Cu1—N1 91.70 (8) C5—C6—H6 119.9
O1i—Cu1—N1i 91.70 (8) C6—C7—C2 120.8 (3)
O1—Cu1—N1i 88.30 (8) C6—C7—H7 119.6
N1—Cu1—N1i 180.00 (16) C2—C7—H7 119.6
C1—N1—C10 115.2 (2) O2—C8—H8A 109.5
C1—N1—Cu1 123.28 (18) O2—C8—H8B 109.5
C10—N1—Cu1 121.36 (17) H8A—C8—H8B 109.5
C9—N2—C13 116.5 (3) O2—C8—H8C 109.5
C3—O1—Cu1 127.80 (17) H8A—C8—H8C 109.5
C4—O2—C8 117.4 (2) H8B—C8—H8C 109.5
N1—C1—C2 126.7 (3) N2—C9—C10 125.1 (3)
N1—C1—H1 116.7 N2—C9—Cl1 115.2 (2)
C2—C1—H1 116.7 C10—C9—Cl1 119.6 (2)
C3—C2—C7 120.6 (3) C11—C10—C9 117.0 (2)
C3—C2—C1 121.9 (2) C11—C10—N1 122.5 (2)
C7—C2—C1 117.3 (3) C9—C10—N1 120.5 (2)
O1—C3—C2 124.5 (2) C10—C11—C12 119.0 (3)
O1—C3—C4 118.2 (3) C10—C11—H11 120.5
C2—C3—C4 117.3 (2) C12—C11—H11 120.5
O2—C4—C5 125.7 (3) C13—C12—C11 119.1 (3)
O2—C4—C3 114.2 (2) C13—C12—H12 120.5
C5—C4—C3 120.1 (3) C11—C12—H12 120.5
C4—C5—C6 121.0 (3) N2—C13—C12 123.3 (3)
C4—C5—H5 119.5 N2—C13—H13 118.3
C6—C5—H5 119.5 C12—C13—H13 118.3
O1i—Cu1—N1—C1 161.5 (2) O2—C4—C5—C6 178.8 (3)
O1—Cu1—N1—C1 −18.5 (2) C3—C4—C5—C6 −1.2 (4)
O1i—Cu1—N1—C10 −13.9 (2) C4—C5—C6—C7 0.0 (5)
O1—Cu1—N1—C10 166.1 (2) C5—C6—C7—C2 1.5 (5)
N1—Cu1—O1—C3 21.0 (2) C3—C2—C7—C6 −1.7 (4)
N1i—Cu1—O1—C3 −159.0 (2) C1—C2—C7—C6 −176.5 (3)
C10—N1—C1—C2 −175.3 (2) C13—N2—C9—C10 −2.2 (5)
Cu1—N1—C1—C2 9.1 (4) C13—N2—C9—Cl1 179.7 (2)
N1—C1—C2—C3 6.3 (4) N2—C9—C10—C11 3.2 (4)
N1—C1—C2—C7 −179.0 (3) Cl1—C9—C10—C11 −178.8 (2)
Cu1—O1—C3—C2 −13.0 (4) N2—C9—C10—N1 −176.8 (3)
Cu1—O1—C3—C4 167.22 (18) Cl1—C9—C10—N1 1.2 (4)
C7—C2—C3—O1 −179.3 (2) C1—N1—C10—C11 −60.3 (3)
C1—C2—C3—O1 −4.8 (4) Cu1—N1—C10—C11 115.4 (3)
C7—C2—C3—C4 0.4 (4) C1—N1—C10—C9 119.7 (3)
C1—C2—C3—C4 175.0 (2) Cu1—N1—C10—C9 −64.6 (3)
C8—O2—C4—C5 0.7 (4) C9—C10—C11—C12 −2.2 (4)
C8—O2—C4—C3 −179.2 (2) N1—C10—C11—C12 177.8 (2)
O1—C3—C4—O2 0.7 (4) C10—C11—C12—C13 0.4 (5)
C2—C3—C4—O2 −179.0 (2) C9—N2—C13—C12 0.2 (5)
O1—C3—C4—C5 −179.2 (2) C11—C12—C13—N2 0.6 (5)
C2—C3—C4—C5 1.0 (4)

Symmetry codes: (i) −x+1, −y+1, −z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: OM2379).

References

  1. Ding, Y.-J., Tong, J.-F., Dong, W.-K., Sun, Y.-X. & Yao, J. (2009). Acta Cryst. E65, m1013. [DOI] [PMC free article] [PubMed]
  2. Dong, W.-K., Sun, Y.-X., Zhao, C.-Y., Dong, X.-Y. & Xu, L. (2010). Polyhedron, 29, 2087–2097.
  3. Dong, W.-K., Tong, J.-F., An, L.-L., Wu, J.-C. & Yao, J. (2009). Acta Cryst. E65, m945. [DOI] [PMC free article] [PubMed]
  4. Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Siemens (1996). SMART and SAINT Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810052414/om2379sup1.cif

e-67-00m91-sup1.cif (17.8KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052414/om2379Isup2.hkl

e-67-00m91-Isup2.hkl (111.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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