Abstract
In the title compound, C17H13ClN4OS, the 1,3,4-thiadiazole ring makes dihedral angles of 9.70 (15) and 7.22 (10)° with the benzene and phenyl rings, respectively; the dihedral angle between these two rings is 6.37 (19)°. In the crystal, pairs of N—H⋯N and C—H⋯O hydrogen bonds between inversion-related molecules result in supramolecular ribbons displaying alternate R 2 2(8) and R 2 2(14) graph-set ring motifs.
Related literature
For the biological activity of urea derivatives, see: Abad et al. (2004 ▶); Chen et al. (2005 ▶); Yonova & Stoilkova (2005 ▶). For the biological activity of 1,3,4-thiadiazole derivatives, see: Guzeldemirci & Kucukbasmaci (2010 ▶); Song & Tan (2008 ▶); Zou et al. (2002 ▶). For the synthesis, see: Song et al. (2007 ▶).
Experimental
Crystal data
C17H13ClN4OS
M r = 356.82
Monoclinic,
a = 11.2399 (6) Å
b = 4.1032 (2) Å
c = 35.2497 (16) Å
β = 91.525 (4)°
V = 1625.12 (14) Å3
Z = 4
Mo Kα radiation
μ = 0.38 mm−1
T = 298 K
0.40 × 0.06 × 0.02 mm
Data collection
Bruker SMART CCD area-detector diffractometer
10860 measured reflections
3708 independent reflections
2081 reflections with I > 2σ(I)
R int = 0.091
Refinement
R[F 2 > 2σ(F 2)] = 0.068
wR(F 2) = 0.154
S = 1.01
3708 reflections
223 parameters
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.31 e Å−3
Δρmin = −0.20 e Å−3
Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002479/is2664sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002479/is2664Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C2—H2⋯O1i | 0.93 | 2.55 | 3.432 (4) | 159 |
| N2—H2A⋯N3ii | 0.82 (4) | 2.03 (4) | 2.848 (4) | 174 (3) |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
The authors acknowledge financial support from the Scientific Research Fund of Henan Provincial Education Department, China (grant Nos. 2007150050 and 2009B150030).
supplementary crystallographic information
Comment
Urea derivatives have attracted much attention on the account of their interesting biological effects, such as insecticidal, fungicidal, herbicidal and plant-growth regulating activities (Abad et al., 2004; Chen et al., 2005), especially cytokinin acyivity (Yonova & Stoilkova, 2005). 1,3,4-Thiadiazole derivatives are known to exhibit a wide range of biological activities (Zou et al., 2002; Song & Tan, 2008; Guzeldemirci & Kucukbasmaci, 2010). In view of our extensive interest and as a continuing search for new urea-type cytokinins, we investigate the urea derivatives incorporating a 1,3,4-thiadiazole nucleus, including the title compound.
The crystal structure (Fig.1) revealed that the title molecule which consists of three rings is approximately planar, the dihedral angles formed by the thiadiazole ring with the chlorophenyl and vinylphenyl rings being only 9.70 (15) and 7.22 (10)°, respectively, and the styryl moiety assumes a trans-configuration about C10═C11 double bond of the vinyl moiety. All bond lengths and angles are as expected. In the crystal structure, intermolecular N—H···N and C—H···O hydrogen bonds occurring between centrosymmetrically related molecules result in the formation of ribbons displaying alternate rings of graph-set motifs R22(8) and R22(14), as shown in Fig. 2 and Table 1.
Experimental
The title compound was prepared according to the procedure of Song et al. (2007). Suitable crystals were obtained by vapor diffusion of methanol in DMF at room temperature (m.p. >573 K). Elemental analysis: analysis calculated for C17H13ClN4OS: C 57.22, H 3.67, N 15.70%; found: C 57.45, H 3.56, N 15.82%.
Refinement
C-bound H atoms were positioned geometrically and constrained to ride on their parent atoms, with C—H = 0.93 Å, and with Uiso(H) = 1.2Ueq(C). N-bound H atoms were freely refined [refined distances 0.82 (4) and 0.86 (3) Å].
Figures
Fig. 1.
View of the title molecule, showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented by circles of arbitrary size.
Fig. 2.
A partial packing diagram of the title molecule. Hydrogen bonds are indicated by dashed lines.
Crystal data
| C17H13ClN4OS | F(000) = 736 |
| Mr = 356.82 | Dx = 1.458 Mg m−3Dm = 1.459 Mg m−3Dm measured by not measured |
| Monoclinic, P21/c | Melting point > 573 K |
| Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
| a = 11.2399 (6) Å | Cell parameters from 1521 reflections |
| b = 4.1032 (2) Å | θ = 2.9–23.2° |
| c = 35.2497 (16) Å | µ = 0.38 mm−1 |
| β = 91.525 (4)° | T = 298 K |
| V = 1625.12 (14) Å3 | Block, colorless |
| Z = 4 | 0.40 × 0.06 × 0.02 mm |
Data collection
| Bruker SMART CCD area-detector diffractometer | 2081 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.091 |
| graphite | θmax = 27.5°, θmin = 1.8° |
| φ and ω scans | h = −14→14 |
| 10860 measured reflections | k = −5→5 |
| 3708 independent reflections | l = −45→35 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.068 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.154 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.01 | w = 1/[σ2(Fo2) + (0.0498P)2] where P = (Fo2 + 2Fc2)/3 |
| 3708 reflections | (Δ/σ)max = 0.001 |
| 223 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.9546 (3) | −0.0487 (8) | −0.10673 (10) | 0.0517 (9) | |
| C2 | 0.9869 (3) | 0.0032 (9) | −0.06905 (10) | 0.0559 (10) | |
| H2 | 1.0585 | −0.0780 | −0.0592 | 0.067* | |
| C3 | 0.9118 (3) | 0.1766 (8) | −0.04629 (10) | 0.0519 (9) | |
| H3 | 0.9330 | 0.2130 | −0.0210 | 0.062* | |
| C4 | 0.8049 (3) | 0.2972 (8) | −0.06083 (10) | 0.0440 (8) | |
| C5 | 0.7739 (3) | 0.2341 (9) | −0.09865 (10) | 0.0536 (9) | |
| H5 | 0.7012 | 0.3078 | −0.1085 | 0.064* | |
| C6 | 0.8486 (3) | 0.0657 (9) | −0.12150 (10) | 0.0565 (10) | |
| H6 | 0.8277 | 0.0291 | −0.1468 | 0.068* | |
| C7 | 0.7271 (3) | 0.5485 (8) | −0.00213 (10) | 0.0468 (8) | |
| C8 | 0.6130 (3) | 0.8377 (8) | 0.04418 (10) | 0.0458 (8) | |
| C9 | 0.5972 (3) | 0.9536 (8) | 0.10951 (9) | 0.0470 (8) | |
| C10 | 0.6089 (3) | 0.9901 (8) | 0.15047 (10) | 0.0499 (9) | |
| H10 | 0.5513 | 1.1121 | 0.1626 | 0.060* | |
| C11 | 0.6956 (3) | 0.8619 (8) | 0.17178 (10) | 0.0491 (9) | |
| H11 | 0.7501 | 0.7342 | 0.1591 | 0.059* | |
| C12 | 0.7170 (3) | 0.8949 (8) | 0.21285 (10) | 0.0505 (9) | |
| C13 | 0.6371 (4) | 1.0434 (9) | 0.23675 (11) | 0.0639 (10) | |
| H13 | 0.5660 | 1.1267 | 0.2268 | 0.077* | |
| C14 | 0.6625 (5) | 1.0679 (11) | 0.27489 (12) | 0.0839 (13) | |
| H14 | 0.6079 | 1.1654 | 0.2907 | 0.101* | |
| C15 | 0.7677 (5) | 0.9501 (11) | 0.28999 (12) | 0.0881 (15) | |
| H15 | 0.7843 | 0.9683 | 0.3159 | 0.106* | |
| C16 | 0.8480 (4) | 0.8058 (11) | 0.26689 (13) | 0.0810 (13) | |
| H16 | 0.9197 | 0.7273 | 0.2770 | 0.097* | |
| C17 | 0.8222 (4) | 0.7772 (9) | 0.22848 (11) | 0.0656 (11) | |
| H17 | 0.8768 | 0.6767 | 0.2129 | 0.079* | |
| Cl1 | 1.05145 (9) | −0.2566 (3) | −0.13606 (3) | 0.0742 (4) | |
| N1 | 0.7246 (2) | 0.4851 (7) | −0.04021 (8) | 0.0500 (8) | |
| H1A | 0.670 (3) | 0.583 (8) | −0.0530 (9) | 0.060* | |
| N2 | 0.6343 (3) | 0.7450 (8) | 0.00788 (9) | 0.0540 (8) | |
| H2A | 0.588 (3) | 0.822 (8) | −0.0081 (10) | 0.065* | |
| N3 | 0.5194 (2) | 1.0175 (7) | 0.05141 (8) | 0.0548 (8) | |
| N4 | 0.5103 (2) | 1.0847 (7) | 0.08984 (8) | 0.0539 (8) | |
| O1 | 0.7993 (2) | 0.4425 (6) | 0.02092 (6) | 0.0620 (7) | |
| S1 | 0.69949 (7) | 0.7370 (2) | 0.08328 (2) | 0.0497 (3) |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.045 (2) | 0.051 (2) | 0.060 (2) | −0.0060 (17) | −0.0008 (18) | 0.0119 (18) |
| C2 | 0.0382 (19) | 0.064 (2) | 0.065 (3) | 0.0002 (18) | −0.0084 (18) | 0.019 (2) |
| C3 | 0.042 (2) | 0.065 (2) | 0.047 (2) | −0.0022 (17) | −0.0103 (16) | 0.0139 (18) |
| C4 | 0.0360 (17) | 0.046 (2) | 0.050 (2) | −0.0055 (15) | −0.0075 (15) | 0.0151 (17) |
| C5 | 0.043 (2) | 0.064 (2) | 0.052 (2) | −0.0041 (18) | −0.0138 (17) | 0.012 (2) |
| C6 | 0.057 (2) | 0.065 (2) | 0.047 (2) | −0.0064 (19) | −0.0108 (19) | 0.0081 (19) |
| C7 | 0.0388 (19) | 0.051 (2) | 0.050 (2) | −0.0031 (16) | −0.0126 (16) | 0.0128 (18) |
| C8 | 0.0393 (19) | 0.050 (2) | 0.048 (2) | −0.0026 (15) | −0.0126 (15) | 0.0128 (17) |
| C9 | 0.0367 (18) | 0.052 (2) | 0.052 (2) | −0.0047 (15) | −0.0042 (16) | 0.0126 (17) |
| C10 | 0.0432 (19) | 0.054 (2) | 0.053 (2) | −0.0010 (17) | 0.0034 (17) | 0.0024 (18) |
| C11 | 0.048 (2) | 0.049 (2) | 0.051 (2) | −0.0004 (16) | −0.0034 (17) | 0.0044 (17) |
| C12 | 0.057 (2) | 0.050 (2) | 0.044 (2) | −0.0060 (17) | −0.0064 (18) | 0.0063 (17) |
| C13 | 0.071 (3) | 0.068 (3) | 0.053 (3) | 0.007 (2) | −0.001 (2) | 0.001 (2) |
| C14 | 0.120 (4) | 0.074 (3) | 0.059 (3) | 0.007 (3) | 0.012 (3) | −0.009 (2) |
| C15 | 0.142 (5) | 0.071 (3) | 0.051 (3) | −0.006 (3) | −0.023 (3) | −0.001 (2) |
| C16 | 0.099 (4) | 0.076 (3) | 0.066 (3) | 0.003 (3) | −0.025 (3) | 0.003 (3) |
| C17 | 0.070 (3) | 0.072 (3) | 0.054 (2) | 0.007 (2) | −0.011 (2) | 0.004 (2) |
| Cl1 | 0.0655 (7) | 0.0789 (7) | 0.0785 (8) | 0.0047 (5) | 0.0083 (5) | 0.0018 (6) |
| N1 | 0.0393 (16) | 0.060 (2) | 0.0493 (19) | 0.0041 (14) | −0.0180 (14) | 0.0090 (15) |
| N2 | 0.0420 (17) | 0.070 (2) | 0.049 (2) | 0.0067 (15) | −0.0162 (13) | 0.0101 (17) |
| N3 | 0.0385 (16) | 0.071 (2) | 0.0543 (19) | 0.0026 (15) | −0.0145 (14) | 0.0089 (16) |
| N4 | 0.0385 (16) | 0.066 (2) | 0.057 (2) | −0.0004 (14) | −0.0077 (14) | 0.0098 (16) |
| O1 | 0.0511 (15) | 0.0825 (18) | 0.0513 (15) | 0.0170 (13) | −0.0186 (12) | 0.0107 (14) |
| S1 | 0.0397 (5) | 0.0609 (6) | 0.0479 (5) | 0.0024 (4) | −0.0117 (4) | 0.0111 (5) |
Geometric parameters (Å, °)
| C1—C6 | 1.370 (4) | C9—S1 | 1.739 (3) |
| C1—C2 | 1.384 (5) | C10—C11 | 1.324 (4) |
| C1—Cl1 | 1.744 (4) | C10—H10 | 0.9300 |
| C2—C3 | 1.378 (5) | C11—C12 | 1.468 (4) |
| C2—H2 | 0.9300 | C11—H11 | 0.9300 |
| C3—C4 | 1.385 (4) | C12—C17 | 1.379 (5) |
| C3—H3 | 0.9300 | C12—C13 | 1.388 (5) |
| C4—C5 | 1.393 (5) | C13—C14 | 1.370 (5) |
| C4—N1 | 1.404 (4) | C13—H13 | 0.9300 |
| C5—C6 | 1.366 (5) | C14—C15 | 1.372 (6) |
| C5—H5 | 0.9300 | C14—H14 | 0.9300 |
| C6—H6 | 0.9300 | C15—C16 | 1.366 (6) |
| C7—O1 | 1.214 (4) | C15—H15 | 0.9300 |
| C7—N1 | 1.367 (4) | C16—C17 | 1.382 (5) |
| C7—N2 | 1.372 (4) | C16—H16 | 0.9300 |
| C8—N3 | 1.316 (4) | C17—H17 | 0.9300 |
| C8—N2 | 1.362 (4) | N1—H1A | 0.86 (3) |
| C8—S1 | 1.716 (3) | N2—H2A | 0.82 (4) |
| C9—N4 | 1.299 (4) | N3—N4 | 1.389 (4) |
| C9—C10 | 1.454 (4) | ||
| C6—C1—C2 | 121.0 (3) | C10—C11—C12 | 128.5 (3) |
| C6—C1—Cl1 | 119.5 (3) | C10—C11—H11 | 115.8 |
| C2—C1—Cl1 | 119.5 (3) | C12—C11—H11 | 115.8 |
| C3—C2—C1 | 119.3 (3) | C17—C12—C13 | 118.2 (3) |
| C3—C2—H2 | 120.4 | C17—C12—C11 | 118.6 (3) |
| C1—C2—H2 | 120.4 | C13—C12—C11 | 123.2 (3) |
| C2—C3—C4 | 120.5 (3) | C14—C13—C12 | 120.4 (4) |
| C2—C3—H3 | 119.7 | C14—C13—H13 | 119.8 |
| C4—C3—H3 | 119.7 | C12—C13—H13 | 119.8 |
| C3—C4—C5 | 118.7 (3) | C13—C14—C15 | 120.6 (4) |
| C3—C4—N1 | 124.6 (3) | C13—C14—H14 | 119.7 |
| C5—C4—N1 | 116.8 (3) | C15—C14—H14 | 119.7 |
| C6—C5—C4 | 121.1 (3) | C16—C15—C14 | 119.8 (4) |
| C6—C5—H5 | 119.4 | C16—C15—H15 | 120.1 |
| C4—C5—H5 | 119.4 | C14—C15—H15 | 120.1 |
| C5—C6—C1 | 119.4 (3) | C15—C16—C17 | 119.7 (4) |
| C5—C6—H6 | 120.3 | C15—C16—H16 | 120.1 |
| C1—C6—H6 | 120.3 | C17—C16—H16 | 120.1 |
| O1—C7—N1 | 125.8 (3) | C12—C17—C16 | 121.1 (4) |
| O1—C7—N2 | 122.6 (3) | C12—C17—H17 | 119.4 |
| N1—C7—N2 | 111.6 (3) | C16—C17—H17 | 119.4 |
| N3—C8—N2 | 120.0 (3) | C7—N1—C4 | 128.1 (3) |
| N3—C8—S1 | 114.7 (3) | C7—N1—H1A | 115 (2) |
| N2—C8—S1 | 125.3 (3) | C4—N1—H1A | 117 (2) |
| N4—C9—C10 | 122.3 (3) | C8—N2—C7 | 124.0 (3) |
| N4—C9—S1 | 115.2 (3) | C8—N2—H2A | 114 (2) |
| C10—C9—S1 | 122.5 (2) | C7—N2—H2A | 122 (2) |
| C11—C10—C9 | 124.6 (3) | C8—N3—N4 | 112.3 (3) |
| C11—C10—H10 | 117.7 | C9—N4—N3 | 111.4 (3) |
| C9—C10—H10 | 117.7 | C8—S1—C9 | 86.31 (17) |
| C6—C1—C2—C3 | −0.9 (5) | C13—C12—C17—C16 | −0.1 (6) |
| Cl1—C1—C2—C3 | 177.9 (2) | C11—C12—C17—C16 | 179.0 (3) |
| C1—C2—C3—C4 | 0.2 (5) | C15—C16—C17—C12 | 0.7 (6) |
| C2—C3—C4—C5 | 1.2 (5) | O1—C7—N1—C4 | −2.2 (6) |
| C2—C3—C4—N1 | −177.8 (3) | N2—C7—N1—C4 | 179.4 (3) |
| C3—C4—C5—C6 | −2.0 (5) | C3—C4—N1—C7 | −9.2 (5) |
| N1—C4—C5—C6 | 177.1 (3) | C5—C4—N1—C7 | 171.7 (3) |
| C4—C5—C6—C1 | 1.4 (5) | N3—C8—N2—C7 | −177.6 (3) |
| C2—C1—C6—C5 | 0.1 (5) | S1—C8—N2—C7 | 2.0 (5) |
| Cl1—C1—C6—C5 | −178.7 (3) | O1—C7—N2—C8 | −0.7 (5) |
| N4—C9—C10—C11 | −179.9 (3) | N1—C7—N2—C8 | 177.8 (3) |
| S1—C9—C10—C11 | −0.9 (5) | N2—C8—N3—N4 | 179.0 (3) |
| C9—C10—C11—C12 | 177.6 (3) | S1—C8—N3—N4 | −0.6 (4) |
| C10—C11—C12—C17 | −171.1 (3) | C10—C9—N4—N3 | 179.5 (3) |
| C10—C11—C12—C13 | 7.9 (6) | S1—C9—N4—N3 | 0.4 (4) |
| C17—C12—C13—C14 | −0.7 (6) | C8—N3—N4—C9 | 0.1 (4) |
| C11—C12—C13—C14 | −179.7 (4) | N3—C8—S1—C9 | 0.7 (3) |
| C12—C13—C14—C15 | 0.8 (7) | N2—C8—S1—C9 | −178.9 (3) |
| C13—C14—C15—C16 | −0.2 (7) | N4—C9—S1—C8 | −0.6 (3) |
| C14—C15—C16—C17 | −0.5 (7) | C10—C9—S1—C8 | −179.7 (3) |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C2—H2···O1i | 0.93 | 2.55 | 3.432 (4) | 159 |
| N2—H2A···N3ii | 0.82 (4) | 2.03 (4) | 2.848 (4) | 174 (3) |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x+1, −y+2, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IS2664).
References
- Abad, A., Agullo, C., Cunat, A. C., Jimenez, R. & Vilanova, C. (2004). J. Agric. Food Chem. 52, 4675–4683. [DOI] [PubMed]
- Bruker (2001). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Chen, L., Wang, Q. M., Huang, R. Q., Mao, C. H., Shang, J. & Bi, F. C. (2005). J. Agric. Food Chem. 53, 38–41. [DOI] [PubMed]
- Guzeldemirci, N. U. & Kucukbasmaci, O. (2010). Eur. J. Med. Chem. 45, 63–68. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Song, X. J. & Tan, X. H. (2008). Phosphorus Sulfur Silicon Relat. Elem. 183, 1955–1965.
- Song, X. J., Tan, X. H. & Wang, Y. G. (2007). Phosphorus Sulfur Silicon Relat. Elem. 182, 1907–1913.
- Yonova, P. A. & Stoilkova, G. M. (2005). J. Plant Growth Regul. 23, 280–291.
- Zou, X. J., Lai, L. H., Jin, G. Y. & Zhang, Z. X. (2002). J. Agric. Food Chem. 50, 3757–3760. [DOI] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002479/is2664sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002479/is2664Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


