Abstract
In the title compound, [Cu(C2N3)(C10H8N2S2)]n, the CuI atoms are connected by bridging dicyanamide ligands, forming chains parallel to [100]. Each CuI atom displays a tetrahedral coordination environment, formed by one S atom and three N atoms from one 2-(pyridin-2-yldisulfanyl)pyridine and two dicyanamide ligands. The crystal structure is stabilized by C—H⋯N hydrogen bonds, forming a three-dimensional network.
Related literature
For potential applications of metal-organic frameworks, see: Eddaoudi et al. (2001 ▶). For metal-organic frameworks constructed from flexible ligands, see: Xu et al. (2009 ▶). For related structures, see: Mal et al. (2006 ▶); Schlueter et al. (2007 ▶); Sen et al. (2007 ▶).
Experimental
Crystal data
[Cu(C2N3)(C10H8N2S2)]
M r = 349.92
Triclinic,
a = 7.6294 (15) Å
b = 9.5964 (19) Å
c = 10.202 (2) Å
α = 84.19 (3)°
β = 80.63 (3)°
γ = 70.93 (3)°
V = 695.6 (2) Å3
Z = 2
Mo Kα radiation
μ = 1.87 mm−1
T = 293 K
0.20 × 0.16 × 0.12 mm
Data collection
Bruker APEXII CCD diffractometer
Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.893, T max = 1.000
6615 measured reflections
2669 independent reflections
2301 reflections with I > 2σ(I)
R int = 0.018
Refinement
R[F 2 > 2σ(F 2)] = 0.028
wR(F 2) = 0.081
S = 1.07
2669 reflections
181 parameters
H-atom parameters constrained
Δρmax = 0.39 e Å−3
Δρmin = −0.29 e Å−3
Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811002728/zq2085sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002728/zq2085Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C9—H9⋯N3i | 0.93 | 2.53 | 3.453 (3) | 171 |
Symmetry code: (i)
.
Acknowledgments
The authors are grateful for the financial support of the National Natural Science Foundation of China (Nos. 50602024, 50972060) and NUST Research Funding (No. 2010ZDJH06).
supplementary crystallographic information
Comment
Metal-organic compounds have attracted much attention because of their diverse structures (Eddaoudi et al., 2001). Flexible ligands can play different roles in constructing metal-organic frameworks (Xu et al., 2009). The title compound, {C12H8CuN5S2}n, is constructed by two kinds of flexible ligands: briding dicyanamide ligands and chelate 2-(pyridin-2-yldisulfanyl)pyridine ligands. In this paper, the crystal structure of the title compound is presented. As illustrated in Fig. 1, the Cu atoms are connected by briding dicyanamide ligands, forming a serrate chain. Each Cu atom displays a tetrahedral coordination environment, formed by one S atom and three N atoms from one 2-(pyridin-2-yldisulfanyl)pyridine and two dicyanamide ligands, where the Cu—S and average Cu—N bonds are 2.472 (1) and 1.969 Å, respectively. The crystal structure is stabilized by C—H···N hydrogen bonds [H9···N3iii = 2.53 Å, C9···N3iii = 3.453 (3) Å, and C9—H9···N3iii = 171°] between the central N atom of the dicyanamide and one H atom of a pyridine ring, forming a three-dimensional network [symmetry code: (iii) x + 1, y - 1, z].
Experimental
CuN(CN)2 (0.4 mmol) and NaN(CN)2 (1.2 mmol) were added into 2 ml DMF with thorough stir for 6 minutes. After filtration, the colorless filtrate was carefully laid on the surface with the solution of bis(2-pyridyl)disulfide (0.5 mmol) in 5 ml i-PrOH. Colorless crystals were obtained after 3 weeks.
Refinement
The H atoms were positioned geometrically and refined with a riding model, with C—H = 0.93 Å and Uiso = 1.2Ueq(C).
Figures
Fig. 1.
The molecular structure of a portion of the title compound, with atom labels and 30% probability displacement ellipsoids. All H atoms have been omitted [symmetry code: (i) x+1, y, z].
Crystal data
| [Cu(C2N3)(C10H8N2S2)] | Z = 2 |
| Mr = 349.92 | F(000) = 352 |
| Triclinic, P1 | Dx = 1.671 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.6294 (15) Å | Cell parameters from 3088 reflections |
| b = 9.5964 (19) Å | θ = 3.0–28.9° |
| c = 10.202 (2) Å | µ = 1.87 mm−1 |
| α = 84.19 (3)° | T = 293 K |
| β = 80.63 (3)° | Block, colourless |
| γ = 70.93 (3)° | 0.20 × 0.16 × 0.12 mm |
| V = 695.6 (2) Å3 |
Data collection
| Bruker APEXII CCD diffractometer | 2669 independent reflections |
| Radiation source: fine-focus sealed tube | 2301 reflections with I > 2σ(I) |
| graphite | Rint = 0.018 |
| ω scans | θmax = 26.0°, θmin = 3.1° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→9 |
| Tmin = 0.893, Tmax = 1.000 | k = −11→11 |
| 6615 measured reflections | l = −12→12 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.081 | H-atom parameters constrained |
| S = 1.07 | w = 1/[σ2(Fo2) + (0.0478P)2 + 0.0204P] where P = (Fo2 + 2Fc2)/3 |
| 2669 reflections | (Δ/σ)max < 0.001 |
| 181 parameters | Δρmax = 0.39 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cu1 | −0.03943 (3) | 0.83530 (3) | 0.16964 (3) | 0.05693 (13) | |
| S1 | −0.00326 (7) | 0.67390 (7) | 0.37486 (5) | 0.05609 (17) | |
| S2 | 0.11161 (9) | 0.47767 (7) | 0.28919 (5) | 0.06255 (18) | |
| N1 | −0.3026 (2) | 0.9293 (2) | 0.16879 (19) | 0.0580 (5) | |
| N2 | 0.1131 (2) | 0.9633 (2) | 0.17961 (19) | 0.0599 (5) | |
| N3 | −0.6377 (2) | 1.0592 (2) | 0.2077 (2) | 0.0694 (6) | |
| N4 | 0.3589 (3) | 0.6469 (2) | 0.38308 (18) | 0.0610 (5) | |
| N5 | 0.1249 (2) | 0.65814 (18) | 0.06703 (15) | 0.0464 (4) | |
| C1 | −0.4605 (3) | 0.9840 (2) | 0.1839 (2) | 0.0489 (5) | |
| C2 | 0.2361 (3) | 1.0016 (2) | 0.1905 (2) | 0.0480 (5) | |
| C3 | 0.1841 (3) | 0.7106 (2) | 0.43562 (18) | 0.0452 (4) | |
| C4 | 0.1311 (3) | 0.8103 (3) | 0.5330 (2) | 0.0612 (6) | |
| H4 | 0.0059 | 0.8499 | 0.5684 | 0.073* | |
| C5 | 0.2682 (4) | 0.8504 (3) | 0.5770 (2) | 0.0709 (7) | |
| H5 | 0.2372 | 0.9197 | 0.6414 | 0.085* | |
| C6 | 0.4516 (4) | 0.7863 (3) | 0.5242 (2) | 0.0692 (7) | |
| H6 | 0.5475 | 0.8109 | 0.5519 | 0.083* | |
| C7 | 0.4889 (3) | 0.6858 (3) | 0.4302 (2) | 0.0695 (7) | |
| H7 | 0.6136 | 0.6409 | 0.3963 | 0.083* | |
| C8 | 0.1811 (3) | 0.5212 (2) | 0.11824 (18) | 0.0462 (5) | |
| C9 | 0.2919 (4) | 0.4027 (2) | 0.0454 (2) | 0.0627 (6) | |
| H9 | 0.3245 | 0.3078 | 0.0850 | 0.075* | |
| C10 | 0.3528 (4) | 0.4264 (3) | −0.0852 (2) | 0.0681 (7) | |
| H10 | 0.4289 | 0.3484 | −0.1362 | 0.082* | |
| C11 | 0.2996 (4) | 0.5682 (3) | −0.1403 (2) | 0.0660 (6) | |
| H11 | 0.3402 | 0.5877 | −0.2292 | 0.079* | |
| C12 | 0.1868 (3) | 0.6795 (2) | −0.0633 (2) | 0.0568 (5) | |
| H12 | 0.1505 | 0.7748 | −0.1019 | 0.068* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cu1 | 0.03597 (17) | 0.0595 (2) | 0.0745 (2) | −0.01273 (13) | −0.00278 (13) | −0.01572 (14) |
| S1 | 0.0434 (3) | 0.0798 (4) | 0.0469 (3) | −0.0244 (3) | 0.0007 (2) | −0.0063 (3) |
| S2 | 0.0847 (4) | 0.0645 (4) | 0.0502 (3) | −0.0423 (3) | −0.0082 (3) | 0.0048 (3) |
| N1 | 0.0393 (10) | 0.0623 (11) | 0.0748 (12) | −0.0157 (9) | −0.0099 (8) | −0.0125 (9) |
| N2 | 0.0394 (10) | 0.0572 (11) | 0.0836 (13) | −0.0155 (9) | −0.0067 (9) | −0.0086 (10) |
| N3 | 0.0382 (10) | 0.0433 (10) | 0.1278 (17) | −0.0077 (8) | −0.0184 (10) | −0.0154 (11) |
| N4 | 0.0464 (10) | 0.0763 (13) | 0.0606 (10) | −0.0187 (9) | 0.0016 (8) | −0.0213 (10) |
| N5 | 0.0448 (9) | 0.0463 (9) | 0.0459 (9) | −0.0120 (7) | −0.0051 (7) | −0.0025 (7) |
| C1 | 0.0433 (12) | 0.0430 (10) | 0.0654 (12) | −0.0170 (9) | −0.0154 (10) | −0.0011 (9) |
| C2 | 0.0353 (10) | 0.0381 (10) | 0.0647 (12) | −0.0040 (8) | −0.0064 (9) | −0.0028 (9) |
| C3 | 0.0450 (11) | 0.0532 (11) | 0.0357 (9) | −0.0147 (9) | −0.0049 (8) | 0.0008 (9) |
| C4 | 0.0542 (13) | 0.0674 (14) | 0.0528 (11) | −0.0058 (11) | −0.0028 (10) | −0.0145 (11) |
| C5 | 0.0843 (18) | 0.0700 (15) | 0.0601 (13) | −0.0197 (14) | −0.0148 (12) | −0.0186 (12) |
| C6 | 0.0719 (16) | 0.0802 (17) | 0.0667 (14) | −0.0325 (14) | −0.0237 (13) | −0.0036 (13) |
| C7 | 0.0453 (12) | 0.0879 (18) | 0.0762 (15) | −0.0188 (12) | −0.0066 (11) | −0.0184 (14) |
| C8 | 0.0496 (11) | 0.0484 (11) | 0.0467 (10) | −0.0227 (9) | −0.0093 (9) | −0.0022 (9) |
| C9 | 0.0802 (17) | 0.0417 (11) | 0.0665 (14) | −0.0190 (11) | −0.0118 (12) | −0.0030 (11) |
| C10 | 0.0834 (18) | 0.0525 (13) | 0.0635 (14) | −0.0162 (12) | 0.0008 (12) | −0.0167 (11) |
| C11 | 0.0817 (17) | 0.0652 (15) | 0.0466 (11) | −0.0200 (13) | 0.0006 (11) | −0.0081 (11) |
| C12 | 0.0596 (13) | 0.0518 (12) | 0.0520 (11) | −0.0108 (10) | −0.0056 (10) | 0.0024 (10) |
Geometric parameters (Å, °)
| Cu1—N1 | 1.9143 (18) | C3—C4 | 1.369 (3) |
| Cu1—N2 | 1.967 (2) | C4—C5 | 1.377 (4) |
| Cu1—N5 | 2.0244 (18) | C4—H4 | 0.9300 |
| Cu1—S1 | 2.4720 (10) | C5—C6 | 1.373 (4) |
| S1—C3 | 1.792 (2) | C5—H5 | 0.9300 |
| S1—S2 | 2.0207 (11) | C6—C7 | 1.361 (4) |
| S2—C8 | 1.787 (2) | C6—H6 | 0.9300 |
| N1—C1 | 1.138 (3) | C7—H7 | 0.9300 |
| N2—C2 | 1.138 (3) | C8—C9 | 1.378 (3) |
| N3—C2i | 1.298 (3) | C9—C10 | 1.360 (3) |
| N3—C1 | 1.303 (3) | C9—H9 | 0.9300 |
| N4—C3 | 1.319 (3) | C10—C11 | 1.375 (3) |
| N4—C7 | 1.337 (3) | C10—H10 | 0.9300 |
| N5—C8 | 1.322 (3) | C11—C12 | 1.359 (3) |
| N5—C12 | 1.356 (3) | C11—H11 | 0.9300 |
| C2—N3ii | 1.298 (3) | C12—H12 | 0.9300 |
| N1—Cu1—N2 | 117.16 (8) | C6—C5—C4 | 118.9 (2) |
| N1—Cu1—N5 | 126.58 (8) | C6—C5—H5 | 120.6 |
| N2—Cu1—N5 | 107.60 (7) | C4—C5—H5 | 120.6 |
| N1—Cu1—S1 | 106.75 (7) | C7—C6—C5 | 118.1 (2) |
| N2—Cu1—S1 | 104.29 (6) | C7—C6—H6 | 121.0 |
| N5—Cu1—S1 | 87.90 (5) | C5—C6—H6 | 121.0 |
| C3—S1—S2 | 105.95 (8) | N4—C7—C6 | 124.6 (2) |
| C3—S1—Cu1 | 102.35 (7) | N4—C7—H7 | 117.7 |
| S2—S1—Cu1 | 98.20 (4) | C6—C7—H7 | 117.7 |
| C8—S2—S1 | 105.52 (8) | N5—C8—C9 | 123.48 (18) |
| C1—N1—Cu1 | 172.06 (19) | N5—C8—S2 | 121.22 (16) |
| C2—N2—Cu1 | 161.63 (17) | C9—C8—S2 | 115.29 (16) |
| C2i—N3—C1 | 120.23 (19) | C10—C9—C8 | 119.1 (2) |
| C3—N4—C7 | 115.9 (2) | C10—C9—H9 | 120.5 |
| C8—N5—C12 | 116.52 (18) | C8—C9—H9 | 120.5 |
| C8—N5—Cu1 | 124.88 (13) | C9—C10—C11 | 118.6 (2) |
| C12—N5—Cu1 | 118.59 (14) | C9—C10—H10 | 120.7 |
| N1—C1—N3 | 173.2 (2) | C11—C10—H10 | 120.7 |
| N2—C2—N3ii | 173.5 (2) | C12—C11—C10 | 119.2 (2) |
| N4—C3—C4 | 124.4 (2) | C12—C11—H11 | 120.4 |
| N4—C3—S1 | 119.92 (16) | C10—C11—H11 | 120.4 |
| C4—C3—S1 | 115.61 (16) | N5—C12—C11 | 123.1 (2) |
| C3—C4—C5 | 118.1 (2) | N5—C12—H12 | 118.5 |
| C3—C4—H4 | 120.9 | C11—C12—H12 | 118.5 |
| C5—C4—H4 | 120.9 |
Symmetry codes: (i) x−1, y, z; (ii) x+1, y, z.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C9—H9···N3iii | 0.93 | 2.53 | 3.453 (3) | 171 |
Symmetry codes: (iii) x+1, y−1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: ZQ2085).
References
- Bruker (2007). APEX2 and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
- Eddaoudi, M., Moler, D. B., Li, H. L., Chen, B. L., Reineke, T. M., O’Keeffe, M. & Yaghi, O. M. (2001). Acc. Chem. Res. 34, 319–330. [DOI] [PubMed]
- Mal, D., Tuchagues, J.-P., Chakraborty, S., Mukherjee, A. K., Sen, R. & Koner, S. (2006). Inorg. Chim. Acta, 359, 4431–4435.
- Schlueter, J. A., Manson, J. L., Hyzer, K. A. & Geiser, U. (2007). Polyhedron, 26, 2264–2272.
- Sen, S., Mitra, S., Hughes, D. L., Rosair, G. & Desplanches, C. (2007). Inorg. Chim. Acta, 360, 4085–4092.
- Sheldrick, G. M. (1996). SADABS University of Göttingen, Germany.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Xu, B., Lu, J. & Cao, R. (2009). Cryst. Growth Des. 9, 3003–3005.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811002728/zq2085sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002728/zq2085Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report

