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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jan 22;67(Pt 2):o471. doi: 10.1107/S1600536811002303

5-Bromo-3-(4-fluoro­phenyl­sulfin­yl)-2,4,6-trimethyl-1-benzofuran

Hong Dae Choi a, Pil Ja Seo a, Byeng Wha Son b, Uk Lee b,*
PMCID: PMC3051696  PMID: 21523130

Abstract

In the title mol­ecule, C17H14BrFO2S, the 4-fluoro­phenyl ring makes a dihedral angle of 75.92 (5)° with the mean plane of the benzofuran fragment. In the crystal, mol­ecules are linked by weak inter­molecular C—H⋯O hydrogen bonds and aromatic π–π inter­actions between the benzene and the furan rings of neighbouring mol­ecules [centroid–centroid distance = 3.556 (1) Å].

Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006); Galal et al. (2009); Khan et al. (2005). For natural products with benzofuran rings, see: Akgul & Anil (2003); Soekamto et al. (2003). For our previous structural studies of related 5-bromo-3-(4-fluoro­phenyl­sulfin­yl)-2-methyl-1-benzofuran derivatives, see: Choi et al. (2010, 2011).graphic file with name e-67-0o471-scheme1.jpg

Experimental

Crystal data

  • C17H14BrFO2S

  • M r = 381.25

  • Triclinic, Inline graphic

  • a = 7.6121 (3) Å

  • b = 8.3551 (3) Å

  • c = 13.0681 (4) Å

  • α = 71.551 (2)°

  • β = 84.206 (2)°

  • γ = 74.850 (2)°

  • V = 760.86 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 2.85 mm−1

  • T = 173 K

  • 0.29 × 0.28 × 0.18 mm

Data collection

  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2009) T min = 0.621, T max = 0.746

  • 13138 measured reflections

  • 3491 independent reflections

  • 3041 reflections with I > 2σ(I)

  • R int = 0.020

Refinement

  • R[F 2 > 2σ(F 2)] = 0.026

  • wR(F 2) = 0.070

  • S = 1.03

  • 3491 reflections

  • 202 parameters

  • H-atom parameters constrained

  • Δρmax = 0.37 e Å−3

  • Δρmin = −0.36 e Å−3

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002303/su2248sup1.cif

e-67-0o471-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002303/su2248Isup2.hkl

e-67-0o471-Isup2.hkl (171.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
C14—H14⋯O2i 0.95 2.35 3.232 (2) 154

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Many compounds containing a benzofuran ring show interesting potent pharmacological properties, such as antifungal, antitumor and antiviral, and antimicrobial activities (Aslam et al., 2006; Galal et al., 2009; Khan et al., 2005). These compounds occur in a wide range of natural products (Akgul & Anil, 2003; Soekamto et al., 2003). As a part of our ongoing study of the substituent effect on the solid state structures of 5-bromo-3-(4-fluorophenylsulfinyl)-2-methyl-1-benzofuran analogues (Choi et al., 2010; 2011), we report herein on the crystal structure of the title compound.

In the title molecule (Fig. 1), the benzofuran unit is essentially planar, with a mean deviation of 0.004 (1)Å from the least-squares plane defined by the nine constituent atoms. The dihedral angle formed by the mean plane of the benzofuran fragment and the 4-fluorophenyl ring is 75.92 (5)°.

In the crystal the molecular packing (Fig. 2) is stabilized by weak intermolecular C—H···O hydrogen bonds between the 4-fluorophenyl H-atom and the oxygen of the S═O unit (Table 1; C14–H14···O2i). The crystal packing (Fig. 2) is further stabilized by aromatic π–π interactions between the benzene and furan rings of the adjacent molecules. The Cg1···Cg2ii distance of 3.556 (1)Å (Cg1 and Cg2 are the centroids of the C2-C7 benzene ring and the C1/C2/C7/O1/C8 furan ring, respectively; symmetry code: (ii) = - x + 2, - y + 1, - z + 1).

Experimental

77% 3-chloroperoxybenzoic acid (224 mg, 1.0 mmol) was added in small portions to a stirred solution of 5-bromo-3-(4-fluorophenylsulfanyl)-2,4,6-trimethyl-1-benzofuran (329 mg, 0.9 mmol) in dichloromethane (30 mL) at 273 K. After being stirred at room temperature for 4h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by column chromatography (hexane–ethyl acetate, 4:1 v/v) to afford the title compound as a colorless solid [yield 73%, m.p. 424–425 K; Rf = 0.54 (hexane–ethyl acetate, 4:1 v/v)]. Single crystals, suitable for X-ray diffraction, were prepared by slow evaporation of a solution of the title compound in acetone at room temperature.

Refinement

All the H-atoms were positioned geometrically and refined using a riding model: C–H = 0.95 Å for aryl and 0.98 Å for methyl H-atoms, with Uiso(H) =1.2Ueq(C) for aryl and 1.5Ueq(C) for methyl H-atoms.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are presented as a small spheres of arbitrary radius.

Fig. 2.

Fig. 2.

A view of the C—H···O and π–π interactions (dotted lines) in the crystal structure of the title compound [Cg1 and Cg2 are the centroids of the C2-C7 benzene ring and the C1/C2/C7/O1/C8 furan ring, respectively; Symmetry codes: (i) x - 1, y, z; (ii) - x + 2, - y + 1, - z + 1; (iii) - x + 1, - y + 1, - z + 1].

Crystal data

C17H14BrFO2S Z = 2
Mr = 381.25 F(000) = 384
Triclinic, P1 Dx = 1.664 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 7.6121 (3) Å Cell parameters from 6469 reflections
b = 8.3551 (3) Å θ = 2.7–27.4°
c = 13.0681 (4) Å µ = 2.85 mm1
α = 71.551 (2)° T = 173 K
β = 84.206 (2)° Block, colourless
γ = 74.850 (2)° 0.29 × 0.28 × 0.18 mm
V = 760.86 (5) Å3

Data collection

Bruker SMART APEXII CCD diffractometer 3491 independent reflections
Radiation source: rotating anode 3041 reflections with I > 2σ(I)
graphite multilayer Rint = 0.020
Detector resolution: 10.0 pixels mm-1 θmax = 27.6°, θmin = 1.6°
φ and ω scans h = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2009) k = −10→10
Tmin = 0.621, Tmax = 0.746 l = −16→16
13138 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026 Hydrogen site location: difference Fourier map
wR(F2) = 0.070 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0383P)2 + 0.249P] where P = (Fo2 + 2Fc2)/3
3491 reflections (Δ/σ)max = 0.001
202 parameters Δρmax = 0.37 e Å3
0 restraints Δρmin = −0.36 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.68278 (3) 0.91822 (3) 0.615760 (17) 0.04054 (8)
S1 0.95005 (6) 0.77098 (6) 0.16447 (4) 0.02943 (11)
F1 0.29820 (17) 1.33971 (15) 0.03005 (12) 0.0499 (3)
O1 0.81454 (17) 0.38324 (15) 0.38631 (10) 0.0286 (3)
O2 1.09273 (18) 0.84985 (19) 0.18473 (12) 0.0412 (3)
C1 0.8798 (2) 0.6334 (2) 0.28464 (14) 0.0245 (3)
C2 0.8185 (2) 0.6538 (2) 0.38953 (14) 0.0231 (3)
C3 0.7943 (2) 0.7847 (2) 0.43920 (15) 0.0255 (4)
C4 0.7266 (2) 0.7438 (2) 0.54461 (15) 0.0273 (4)
C5 0.6871 (2) 0.5839 (2) 0.60321 (15) 0.0290 (4)
C6 0.7165 (2) 0.4558 (2) 0.55291 (16) 0.0299 (4)
H6 0.6936 0.3450 0.5895 0.036*
C7 0.7801 (2) 0.4951 (2) 0.44808 (15) 0.0252 (4)
C8 0.8752 (2) 0.4705 (2) 0.28794 (15) 0.0267 (4)
C9 0.8414 (3) 0.9549 (2) 0.38215 (17) 0.0351 (4)
H9A 0.7298 1.0449 0.3573 0.053*
H9B 0.9218 0.9435 0.3200 0.053*
H9C 0.9035 0.9875 0.4318 0.053*
C10 0.6144 (3) 0.5493 (3) 0.71775 (17) 0.0402 (5)
H10A 0.6073 0.4276 0.7465 0.060*
H10B 0.4927 0.6256 0.7191 0.060*
H10C 0.6959 0.5720 0.7621 0.060*
C11 0.9167 (3) 0.3742 (3) 0.20722 (17) 0.0348 (4)
H11A 0.9711 0.4421 0.1423 0.052*
H11B 0.8041 0.3550 0.1884 0.052*
H11C 1.0024 0.2618 0.2376 0.052*
C12 0.7454 (2) 0.9425 (2) 0.13416 (14) 0.0257 (4)
C13 0.5734 (2) 0.9108 (2) 0.15511 (15) 0.0289 (4)
H13 0.5602 0.7970 0.1932 0.035*
C14 0.4209 (3) 1.0452 (2) 0.12041 (15) 0.0309 (4)
H14 0.3019 1.0261 0.1343 0.037*
C15 0.4475 (3) 1.2070 (2) 0.06525 (16) 0.0334 (4)
C16 0.6159 (3) 1.2419 (2) 0.04298 (16) 0.0352 (4)
H16 0.6282 1.3559 0.0044 0.042*
C17 0.7673 (3) 1.1072 (2) 0.07804 (15) 0.0304 (4)
H17 0.8858 1.1275 0.0637 0.036*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.04469 (13) 0.04331 (13) 0.03878 (13) −0.00562 (9) −0.00095 (9) −0.02358 (10)
S1 0.0305 (2) 0.0312 (2) 0.0273 (2) −0.01179 (18) 0.00611 (18) −0.00835 (18)
F1 0.0479 (7) 0.0343 (6) 0.0595 (8) −0.0004 (5) −0.0100 (6) −0.0080 (6)
O1 0.0337 (7) 0.0233 (6) 0.0299 (7) −0.0091 (5) −0.0026 (5) −0.0073 (5)
O2 0.0314 (7) 0.0458 (8) 0.0478 (9) −0.0209 (6) 0.0053 (6) −0.0088 (7)
C1 0.0236 (8) 0.0255 (8) 0.0251 (9) −0.0081 (6) −0.0015 (7) −0.0065 (7)
C2 0.0202 (8) 0.0248 (8) 0.0249 (9) −0.0072 (6) −0.0015 (7) −0.0068 (7)
C3 0.0239 (8) 0.0250 (8) 0.0288 (9) −0.0073 (7) −0.0038 (7) −0.0076 (7)
C4 0.0247 (8) 0.0307 (9) 0.0285 (9) −0.0038 (7) −0.0036 (7) −0.0132 (8)
C5 0.0228 (8) 0.0370 (9) 0.0251 (9) −0.0063 (7) −0.0024 (7) −0.0065 (8)
C6 0.0293 (9) 0.0281 (9) 0.0293 (10) −0.0095 (7) −0.0033 (8) −0.0019 (7)
C7 0.0235 (8) 0.0235 (8) 0.0285 (9) −0.0052 (6) −0.0054 (7) −0.0067 (7)
C8 0.0254 (8) 0.0273 (8) 0.0281 (9) −0.0064 (7) −0.0037 (7) −0.0083 (7)
C9 0.0463 (11) 0.0296 (9) 0.0351 (11) −0.0175 (8) 0.0016 (9) −0.0115 (8)
C10 0.0366 (10) 0.0530 (12) 0.0297 (10) −0.0125 (9) 0.0059 (9) −0.0113 (9)
C11 0.0390 (10) 0.0322 (9) 0.0369 (11) −0.0072 (8) −0.0012 (9) −0.0168 (9)
C12 0.0334 (9) 0.0271 (8) 0.0203 (8) −0.0123 (7) 0.0025 (7) −0.0092 (7)
C13 0.0365 (10) 0.0282 (9) 0.0242 (9) −0.0147 (7) 0.0005 (8) −0.0057 (7)
C14 0.0337 (9) 0.0361 (10) 0.0272 (9) −0.0138 (8) 0.0008 (8) −0.0118 (8)
C15 0.0414 (10) 0.0300 (9) 0.0292 (10) −0.0052 (8) −0.0047 (8) −0.0108 (8)
C16 0.0509 (12) 0.0249 (9) 0.0321 (10) −0.0155 (8) −0.0015 (9) −0.0065 (8)
C17 0.0394 (10) 0.0314 (9) 0.0261 (9) −0.0189 (8) 0.0031 (8) −0.0095 (8)

Geometric parameters (Å, °)

Br1—C4 1.9077 (18) C9—H9A 0.9800
S1—O2 1.4922 (14) C9—H9B 0.9800
S1—C1 1.7559 (18) C9—H9C 0.9800
S1—C12 1.7990 (18) C10—H10A 0.9800
F1—C15 1.363 (2) C10—H10B 0.9800
O1—C8 1.364 (2) C10—H10C 0.9800
O1—C7 1.379 (2) C11—H11A 0.9800
C1—C8 1.357 (2) C11—H11B 0.9800
C1—C2 1.450 (2) C11—H11C 0.9800
C2—C7 1.395 (2) C12—C17 1.384 (2)
C2—C3 1.404 (2) C12—C13 1.387 (3)
C3—C4 1.390 (3) C13—C14 1.384 (3)
C3—C9 1.499 (2) C13—H13 0.9500
C4—C5 1.406 (3) C14—C15 1.373 (3)
C5—C6 1.386 (3) C14—H14 0.9500
C5—C10 1.508 (3) C15—C16 1.371 (3)
C6—C7 1.372 (3) C16—C17 1.381 (3)
C6—H6 0.9500 C16—H16 0.9500
C8—C11 1.482 (3) C17—H17 0.9500
O2—S1—C1 111.31 (9) H9A—C9—H9C 109.5
O2—S1—C12 106.48 (8) H9B—C9—H9C 109.5
C1—S1—C12 99.80 (8) C5—C10—H10A 109.5
C8—O1—C7 106.59 (13) C5—C10—H10B 109.5
C8—C1—C2 107.38 (15) H10A—C10—H10B 109.5
C8—C1—S1 118.89 (14) C5—C10—H10C 109.5
C2—C1—S1 133.73 (13) H10A—C10—H10C 109.5
C7—C2—C3 119.38 (16) H10B—C10—H10C 109.5
C7—C2—C1 104.21 (15) C8—C11—H11A 109.5
C3—C2—C1 136.40 (16) C8—C11—H11B 109.5
C4—C3—C2 115.25 (15) H11A—C11—H11B 109.5
C4—C3—C9 122.91 (16) C8—C11—H11C 109.5
C2—C3—C9 121.84 (16) H11A—C11—H11C 109.5
C3—C4—C5 125.19 (17) H11B—C11—H11C 109.5
C3—C4—Br1 117.61 (13) C17—C12—C13 120.84 (17)
C5—C4—Br1 117.20 (14) C17—C12—S1 116.44 (14)
C6—C5—C4 118.23 (17) C13—C12—S1 122.38 (13)
C6—C5—C10 119.74 (18) C14—C13—C12 119.93 (16)
C4—C5—C10 122.03 (18) C14—C13—H13 120.0
C7—C6—C5 117.35 (17) C12—C13—H13 120.0
C7—C6—H6 121.3 C15—C14—C13 117.72 (17)
C5—C6—H6 121.3 C15—C14—H14 121.1
C6—C7—O1 124.64 (16) C13—C14—H14 121.1
C6—C7—C2 124.57 (17) F1—C15—C16 118.27 (17)
O1—C7—C2 110.78 (15) F1—C15—C14 118.11 (17)
C1—C8—O1 111.03 (16) C16—C15—C14 123.61 (18)
C1—C8—C11 133.38 (18) C15—C16—C17 118.30 (17)
O1—C8—C11 115.56 (15) C15—C16—H16 120.9
C3—C9—H9A 109.5 C17—C16—H16 120.9
C3—C9—H9B 109.5 C16—C17—C12 119.60 (17)
H9A—C9—H9B 109.5 C16—C17—H17 120.2
C3—C9—H9C 109.5 C12—C17—H17 120.2
O2—S1—C1—C8 −129.96 (14) C8—O1—C7—C2 0.00 (18)
C12—S1—C1—C8 117.93 (14) C3—C2—C7—C6 0.9 (3)
O2—S1—C1—C2 50.88 (19) C1—C2—C7—C6 −179.68 (17)
C12—S1—C1—C2 −61.23 (18) C3—C2—C7—O1 −179.17 (14)
C8—C1—C2—C7 −0.43 (18) C1—C2—C7—O1 0.26 (18)
S1—C1—C2—C7 178.79 (15) C2—C1—C8—O1 0.47 (19)
C8—C1—C2—C3 178.85 (19) S1—C1—C8—O1 −178.89 (11)
S1—C1—C2—C3 −1.9 (3) C2—C1—C8—C11 178.42 (19)
C7—C2—C3—C4 −2.0 (2) S1—C1—C8—C11 −0.9 (3)
C1—C2—C3—C4 178.83 (18) C7—O1—C8—C1 −0.30 (19)
C7—C2—C3—C9 177.13 (16) C7—O1—C8—C11 −178.65 (15)
C1—C2—C3—C9 −2.1 (3) O2—S1—C12—C17 34.56 (16)
C2—C3—C4—C5 1.8 (3) C1—S1—C12—C17 150.39 (14)
C9—C3—C4—C5 −177.33 (17) O2—S1—C12—C13 −152.09 (15)
C2—C3—C4—Br1 −178.05 (12) C1—S1—C12—C13 −36.26 (17)
C9—C3—C4—Br1 2.9 (2) C17—C12—C13—C14 −0.5 (3)
C3—C4—C5—C6 −0.3 (3) S1—C12—C13—C14 −173.54 (14)
Br1—C4—C5—C6 179.50 (13) C12—C13—C14—C15 0.3 (3)
C3—C4—C5—C10 179.78 (18) C13—C14—C15—F1 179.50 (17)
Br1—C4—C5—C10 −0.4 (2) C13—C14—C15—C16 0.0 (3)
C4—C5—C6—C7 −0.9 (3) F1—C15—C16—C17 −179.61 (17)
C10—C5—C6—C7 179.00 (17) C14—C15—C16—C17 −0.1 (3)
C5—C6—C7—O1 −179.30 (15) C15—C16—C17—C12 −0.1 (3)
C5—C6—C7—C2 0.6 (3) C13—C12—C17—C16 0.4 (3)
C8—O1—C7—C6 179.95 (17) S1—C12—C17—C16 173.82 (15)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
C14—H14···O2i 0.95 2.35 3.232 (2) 154

Symmetry codes: (i) x−1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SU2248).

References

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  2. Aslam, S. N., Stevenson, P. C., Phythian, S. J., Veitch, N. C. & Hall, D. R. (2006). Tetrahedron, 62, 4214–4226.
  3. Brandenburg, K. (1998). DIAMOND Crystal Impact GbR, Bonn, Germany.
  4. Bruker (2009). APEX2 SADABS and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  5. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010). Acta Cryst. E66, o1297. [DOI] [PMC free article] [PubMed]
  6. Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2011). Acta Cryst. E67, o351. [DOI] [PMC free article] [PubMed]
  7. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  8. Galal, S. A., Abd El-All, A. S., Abdallah, M. M. & El-Diwani, H. I. (2009). Bioorg. Med. Chem. Lett 19, 2420–2428. [DOI] [PubMed]
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  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  11. Soekamto, N. H., Achmad, S. A., Ghisalberti, E. L., Hakim, E. H. & Syah, Y. M. (2003). Phytochemistry, 64, 831–834. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002303/su2248sup1.cif

e-67-0o471-sup1.cif (19.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002303/su2248Isup2.hkl

e-67-0o471-Isup2.hkl (171.2KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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