Abstract
In the title compound, C16H14N2 2+·2PF6 −, the 2,7-dimethyl-2,7-diazapyrenium (DM-diaz) cation lies on a crystallographic twofold rotation axes. The diaz groups are nearly coplanar, with a maximum deviation of 0.008 (3) Å. In the crystal, molecules are linked into a two-dimensional lamellar framework parallel to (104) through weak C—H⋯F interactions.
Related literature
For general background to 2,7-disubstituted diazapyrenium dications, see: Ashton et al. (1999 ▶); Yen et al. (2009 ▶); Steuerman et al. (2004 ▶); Lilienthal et al. (1996 ▶); Sindelar et al. (2005 ▶); Lin et al. (2006 ▶). For related structures, see: Blake et al. (1997 ▶); Dinolfo et al. (2004 ▶).
Experimental
Crystal data
C16H14N2 2+·2PF6 −
M r = 524.23
Monoclinic,
a = 6.7654 (14) Å
b = 10.653 (2) Å
c = 13.422 (3) Å
β = 91.03 (3)°
V = 967.2 (3) Å3
Z = 2
Mo Kα radiation
μ = 0.35 mm−1
T = 293 K
0.31 × 0.31 × 0.19 mm
Data collection
Rigaku R-AXIS RAPID diffractometer
Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.899, T max = 0.937
7699 measured reflections
1756 independent reflections
1439 reflections with I > 2σ(I)
R int = 0.021
Refinement
R[F 2 > 2σ(F 2)] = 0.059
wR(F 2) = 0.182
S = 1.06
1756 reflections
146 parameters
H-atom parameters constrained
Δρmax = 0.48 e Å−3
Δρmin = −0.34 e Å−3
Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811001978/bg2385sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001978/bg2385Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C6—H6⋯F2i | 0.93 | 2.48 | 3.367 (4) | 160 |
| C7—H7⋯F4ii | 0.93 | 2.51 | 3.418 (5) | 167 |
Symmetry codes: (i)
; (ii)
.
Acknowledgments
This work was supported by the fund of Zhejiang Gongshang University (No. 10–3).
supplementary crystallographic information
Comment
2,7-Disubstituted diazapyrenium dications, which combine the features of pyrene, methylviologen, and nucletic acid intercalators, are charming pi-electron deficient building blocks in supramolecular chemistry (Ashton et al., 1999; Yen et al., 2009). They have been widely used as the electron-acceptors for electron-donating units such as hydroquinones and aromatic carboxylates (Steuerman et al., 2004; Lilienthal et al., 1996). Furthermore, due to their luminescence properties, they have also been as fluorescence probes for ion detection (Sindelar et al., 2005) and neurotransmition (Lin et al., 2006). Herein, we report the crystal structure of one of these disubstituted diazapyrenium dications, the N,N'-dimethyl-2,7-diazapyrenium, C16H14N2.2PF6, (DM-diaz).
The cation lies on a crystallographic twofold rotation axes; diaz groups are nearly coplanar with a maximum deviation of 0.008 (3) Å. Unlike many structures that contain diaz (Blake et al., 1997; Dinolfo et al., 2004), Dm-diaz exhibits no face-to-face pi-pi interactions between diaz molecules in the structure. C—H···F interactions are observed between the methyl groups of the DM-diaz molecules and hexafluorophoshate counterions (Table 1), forming a two-dimensional lamellar framework parallel to (101) (Figure 2).
Experimental
A solution of 2,7-diazapyrene (0.210 g, 1.03 mmol) and iodomethane (0.568 g, 4.02 mmol) in acetonitrile (15 ml) was stirred and refluxed for 3 h. After it was cooled to room temperature, a red solid was isolated on a filter and washed with ethyl ether (30 ml). The solid was dissolved with water (75 ml) and a saturated aqueous solution of NH4PF6 (2.44 g, 15.0 mmol) was added until no further precipitate was observed. The red solid was isolated on a filter, washed with water and dried under vacuum to afford the product (0.423 g, 78.4%). Red crystals were obtained by vapor diffusion of isopropyl ether into an acetonitrile solution over a period of 5 d. 1H NMR (500 MHz, CD3CN, 295 K) δ (p.p.m.) 9.88 (4H,s), 8.85 (4H, s), 5.14 (4H, t, J = 5.2 Hz), 3.45 (4H, m), 3.45 (2H, t, J = 5.5 Hz).
Refinement
H atoms bonded to C atoms were palced in geometrically calculated positionand were refined using a riding model, with C—Haromatic = 0.93 Å, C—Hmethyl = 0.96 Å, and with Uiso(H) = 1.2 or 1.5 Ueq(C).
Figures
Fig. 1.
ORTEP view of the title compound. The dispalcement ellipsoids are drawn at 30% probability level. Symmetry code: (A) 2-x, 1-y, 1-z
Fig. 2.
The two-dimensional layer of the compound, parallel to (101).
Crystal data
| C16H14N22+·2PF6− | F(000) = 524 |
| Mr = 524.23 | Dx = 1.800 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 6424 reflections |
| a = 6.7654 (14) Å | θ = 3.0–27.5° |
| b = 10.653 (2) Å | µ = 0.35 mm−1 |
| c = 13.422 (3) Å | T = 293 K |
| β = 91.03 (3)° | Block, yellow |
| V = 967.2 (3) Å3 | 0.31 × 0.31 × 0.19 mm |
| Z = 2 |
Data collection
| Rigaku R-AXIS RAPID diffractometer | 1756 independent reflections |
| Radiation source: fine-focus sealed tube | 1439 reflections with I > 2σ(I) |
| graphite | Rint = 0.021 |
| Detector resolution: 0 pixels mm-1 | θmax = 25.4°, θmin = 3.0° |
| ω scans | h = −8→7 |
| Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −12→12 |
| Tmin = 0.899, Tmax = 0.937 | l = −16→16 |
| 7699 measured reflections |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.182 | H-atom parameters constrained |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.106P)2 + 0.7563P] where P = (Fo2 + 2Fc2)/3 |
| 1756 reflections | (Δ/σ)max < 0.001 |
| 146 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
Special details
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| P1 | 0.73691 (12) | 0.87716 (8) | 0.67479 (6) | 0.0486 (4) | |
| F1 | 0.7852 (5) | 0.9813 (3) | 0.7544 (3) | 0.1277 (13) | |
| F2 | 0.7768 (4) | 0.7779 (3) | 0.7596 (2) | 0.1015 (10) | |
| F3 | 0.5103 (3) | 0.8793 (2) | 0.7022 (2) | 0.0842 (8) | |
| F4 | 0.7012 (5) | 0.9817 (4) | 0.5943 (3) | 0.1329 (14) | |
| F5 | 0.9644 (3) | 0.8750 (3) | 0.6478 (2) | 0.0953 (10) | |
| F6 | 0.6946 (4) | 0.7712 (3) | 0.5961 (2) | 0.1071 (11) | |
| N1 | 1.1916 (4) | 0.2419 (2) | 0.61997 (19) | 0.0458 (6) | |
| C1 | 1.0682 (4) | 0.6661 (3) | 0.4751 (2) | 0.0399 (7) | |
| C2 | 1.2564 (4) | 0.6724 (3) | 0.5268 (2) | 0.0459 (7) | |
| H2 | 1.3272 | 0.7472 | 0.5275 | 0.055* | |
| C3 | 1.3308 (4) | 0.5710 (3) | 0.5740 (2) | 0.0463 (7) | |
| H3 | 1.4527 | 0.5765 | 0.6068 | 0.056* | |
| C4 | 1.2250 (4) | 0.4551 (3) | 0.5743 (2) | 0.0390 (7) | |
| C5 | 1.0387 (4) | 0.4467 (2) | 0.52485 (19) | 0.0360 (6) | |
| C6 | 1.2952 (4) | 0.3482 (3) | 0.6213 (2) | 0.0459 (7) | |
| H6 | 1.4170 | 0.3505 | 0.6545 | 0.055* | |
| C7 | 1.0142 (4) | 0.2319 (3) | 0.5739 (2) | 0.0448 (7) | |
| H7 | 0.9465 | 0.1560 | 0.5750 | 0.054* | |
| C8 | 1.2764 (7) | 0.1282 (3) | 0.6680 (3) | 0.0680 (11) | |
| H8A | 1.1728 | 0.0810 | 0.6984 | 0.102* | |
| H8C | 1.3721 | 0.1526 | 0.7180 | 0.102* | |
| H8B | 1.3392 | 0.0774 | 0.6187 | 0.102* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| P1 | 0.0456 (6) | 0.0520 (6) | 0.0482 (6) | −0.0031 (3) | −0.0017 (4) | −0.0009 (4) |
| F1 | 0.142 (3) | 0.105 (2) | 0.136 (3) | −0.007 (2) | −0.003 (2) | −0.068 (2) |
| F2 | 0.097 (2) | 0.105 (2) | 0.103 (2) | 0.0185 (16) | −0.0030 (16) | 0.0420 (17) |
| F3 | 0.0548 (14) | 0.105 (2) | 0.0938 (18) | 0.0116 (12) | 0.0153 (12) | 0.0123 (14) |
| F4 | 0.109 (2) | 0.150 (3) | 0.140 (3) | −0.012 (2) | −0.008 (2) | 0.093 (2) |
| F5 | 0.0494 (13) | 0.125 (2) | 0.112 (2) | −0.0215 (13) | 0.0103 (13) | −0.0286 (17) |
| F6 | 0.0775 (16) | 0.143 (3) | 0.101 (2) | −0.0446 (17) | 0.0222 (15) | −0.0672 (19) |
| N1 | 0.0497 (14) | 0.0464 (14) | 0.0414 (13) | 0.0030 (11) | 0.0029 (11) | 0.0041 (11) |
| C1 | 0.0359 (14) | 0.0422 (15) | 0.0418 (15) | −0.0054 (12) | 0.0052 (12) | −0.0036 (12) |
| C2 | 0.0366 (15) | 0.0449 (17) | 0.0561 (19) | −0.0096 (12) | −0.0002 (14) | −0.0050 (14) |
| C3 | 0.0322 (14) | 0.0558 (18) | 0.0509 (17) | −0.0075 (13) | −0.0040 (13) | −0.0064 (14) |
| C4 | 0.0323 (14) | 0.0464 (16) | 0.0381 (14) | −0.0014 (11) | −0.0005 (11) | −0.0040 (12) |
| C5 | 0.0325 (14) | 0.0415 (15) | 0.0341 (14) | −0.0027 (11) | 0.0043 (11) | −0.0053 (11) |
| C6 | 0.0409 (16) | 0.0567 (18) | 0.0399 (16) | 0.0017 (13) | −0.0031 (13) | −0.0028 (13) |
| C7 | 0.0461 (17) | 0.0434 (16) | 0.0451 (16) | −0.0035 (13) | 0.0076 (14) | −0.0001 (13) |
| C8 | 0.078 (3) | 0.057 (2) | 0.068 (2) | 0.0077 (18) | −0.015 (2) | 0.0186 (18) |
Geometric parameters (Å, °)
| P1—F4 | 1.567 (3) | C2—C3 | 1.346 (4) |
| P1—F6 | 1.568 (2) | C2—H2 | 0.9300 |
| P1—F1 | 1.570 (3) | C3—C4 | 1.427 (4) |
| P1—F2 | 1.574 (3) | C3—H3 | 0.9300 |
| P1—F3 | 1.583 (2) | C4—C6 | 1.382 (4) |
| P1—F5 | 1.587 (2) | C4—C5 | 1.417 (4) |
| N1—C6 | 1.332 (4) | C5—C5i | 1.413 (5) |
| N1—C7 | 1.344 (4) | C6—H6 | 0.9300 |
| N1—C8 | 1.483 (4) | C7—H7 | 0.9300 |
| C1—C7i | 1.382 (4) | C8—H8A | 0.9600 |
| C1—C5i | 1.402 (4) | C8—H8C | 0.9600 |
| C1—C2 | 1.440 (4) | C8—H8B | 0.9600 |
| F4—P1—F6 | 91.3 (2) | C1—C2—H2 | 119.7 |
| F4—P1—F1 | 89.7 (2) | C2—C3—C4 | 120.8 (3) |
| F6—P1—F1 | 178.30 (18) | C2—C3—H3 | 119.6 |
| F4—P1—F2 | 176.9 (2) | C4—C3—H3 | 119.6 |
| F6—P1—F2 | 91.8 (2) | C6—C4—C5 | 117.2 (3) |
| F1—P1—F2 | 87.2 (2) | C6—C4—C3 | 123.1 (3) |
| F4—P1—F3 | 90.70 (16) | C5—C4—C3 | 119.7 (3) |
| F6—P1—F3 | 90.07 (15) | C1i—C5—C5i | 120.2 (3) |
| F1—P1—F3 | 91.28 (17) | C1i—C5—C4 | 120.6 (3) |
| F2—P1—F3 | 89.74 (15) | C5i—C5—C4 | 119.3 (3) |
| F4—P1—F5 | 89.51 (18) | N1—C6—C4 | 121.2 (3) |
| F6—P1—F5 | 90.11 (14) | N1—C6—H6 | 119.4 |
| F1—P1—F5 | 88.54 (17) | C4—C6—H6 | 119.4 |
| F2—P1—F5 | 90.04 (17) | N1—C7—C1i | 120.4 (3) |
| F3—P1—F5 | 179.73 (16) | N1—C7—H7 | 119.8 |
| C6—N1—C7 | 122.6 (3) | C1i—C7—H7 | 119.8 |
| C6—N1—C8 | 119.3 (3) | N1—C8—H8A | 109.5 |
| C7—N1—C8 | 118.1 (3) | N1—C8—H8C | 109.5 |
| C7i—C1—C5i | 118.0 (3) | H8A—C8—H8C | 109.5 |
| C7i—C1—C2 | 122.6 (3) | N1—C8—H8B | 109.5 |
| C5i—C1—C2 | 119.4 (3) | H8A—C8—H8B | 109.5 |
| C3—C2—C1 | 120.6 (3) | H8C—C8—H8B | 109.5 |
| C3—C2—H2 | 119.7 |
Symmetry codes: (i) −x+2, −y+1, −z+1.
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C6—H6···F2ii | 0.93 | 2.48 | 3.367 (4) | 160 |
| C7—H7···F4iii | 0.93 | 2.51 | 3.418 (5) | 167 |
Symmetry codes: (ii) −x+5/2, y−1/2, −z+3/2; (iii) x, y−1, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BG2385).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811001978/bg2385sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001978/bg2385Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


