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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Jan 22;67(Pt 2):o434. doi: 10.1107/S1600536811001371

4-tert-Butyl­pyridinium triiodide–4-tert-butyl­pyridine (1/1)

Hongshan He a,*, Andrew G Sykes b
PMCID: PMC3051785  PMID: 21523100

Abstract

The title compound, C9H14N+·I3 −·C9H13N, consists of monoprotonated 4-tert-butyl­pyridinium cations and triiodide anions. The triiodide ion has near-symmetric linear geometry, with bond lengths of 2.9105 (4) Å (I—I) and a bond angle of 177.55 (3)° (I—I—I). For this room-temperature structure, the butyl group on the pyridine ring is disordered and has been treated as a rigid rotator, modeled in three separate positions with 1/3, 1/3, 1/3 occupancies. The cations assemble into dimeric forms by way of N—H⋯N hydrogen bonds.

Related literature

For applications of the 4-t-butyl­pyridine and iodide/triiodide system in dye-sensitized solar cells see: Campbell et al. (2004 ▶); Lee et al. (2010 ▶); Wang et al. (2005 ▶). For related structures, see: Fialho et al. (1996 ▶); Kochel (2006 ▶).graphic file with name e-67-0o434-scheme1.jpg

Experimental

Crystal data

  • C9H14N+·I3 −·C9H13N

  • M r = 652.12

  • Tetragonal, Inline graphic

  • a = 11.6862 (4) Å

  • c = 17.1665 (13) Å

  • V = 2344.4 (2) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 4.00 mm−1

  • T = 293 K

  • 0.55 × 0.50 × 0.40 mm

Data collection

  • Bruker APEXII CCD area-detector diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.217, T max = 0.298

  • 23722 measured reflections

  • 2217 independent reflections

  • 1758 reflections with I > 2σ(I)

  • R int = 0.027

Refinement

  • R[F 2 > 2σ(F 2)] = 0.037

  • wR(F 2) = 0.090

  • S = 1.04

  • 2217 reflections

  • 119 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.80 e Å−3

  • Δρmin = −0.77 e Å−3

Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶), WinGX (Farrugia, 1999 ▶) and publCIF (Westrip, 2010 ▶).

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811001371/sj5091sup1.cif

e-67-0o434-sup1.cif (18.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001371/sj5091Isup2.hkl

e-67-0o434-Isup2.hkl (106.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
N1—H99⋯N1i 0.90 1.76 2.655 (7) 172

Symmetry code: (i) Inline graphic.

Acknowledgments

This material is based upon work supported by the National Science Foundation/EPSCoR grant No. 0903804 and by the State of South Dakota.

supplementary crystallographic information

Comment

4 - t-Butylpyridine is usually added into an iodide/triiodide electrolyte solution to enhance the photovoltaic performance of dye-sensitized solar cells. The solution is a mixture of iodide, lithium iodide, 4 - t-butylpyridine, and guanidinium thiocyanate (Campbell et al., 2004; Lee et al., 2010). Alternatively, the electrolyte can be prepared by the reaction between 2-hydroxypropionitrile and lithium iodide (Wang et al., 2005). It was proposed that triiodide was produced during the reaction; however, no direct evidence was obtained. Reported here is the structure of the resulting compound.

In the molecule of the title compound, three iodide atoms in triiodide ion are in a linear geometry (Fig. 1). The I1—I2 bond length is 2.9105 (4)Å and the I2—I1—I2 angle is 177.55 (3)°. The triiodide bond is almost parallel to the pyridyl ring. In each asymmetric unit cell, two pairs of triiodide ions are perpendicular to each other (Fig. 2 and Fig. 3). The cations assemble into dimeric forms by way of N—H···N hydrogen bonds (Fig. 4, Table 1).

Experimental

2-Hydroxypropionitrile (6.1 g) and lithium iodide (10 g) was added to a flask. The resulting mixture was heated to 120°C in a sealed high pressure tube for 30 minutes. When the temperature decreased to 70°C, silica powder with diameter 25 µm (1.3 g), 4 - t-butylpyridine (1.0 g), and ethanol (3 ml) were added. The mixture was stirred by a mechanical stirrer at 50°C for 30 minutes. Red crystals were obtained from the resulting mixture in one month.

Refinement

The hydrogen that binds to N atom is refined and other hydrogen atoms are geometrically constrained and refined in riding mode as follows: methyl d(C—H) = 0.96 Å, Uĩso~(H) = 1.5U~eq~(C); aromatic d(C—H) = 0.93 Å, Uĩso~(H) = 1.2U~eq~(C). The butyl group on the pyridine ring is disordered and has been treated as a rigid rotator, modeled in three separate positions with 1/3,1/3, and 1/3 occupancies. All atoms involved have been refined isotropically.

Figures

Fig. 1.

Fig. 1.

The molecular structure of the title compound showing 30% probability displacement ellipsoids and the atomic numbering.

Fig. 2.

Fig. 2.

Packing diagram of the title compound, viewed down the a axis.

Fig. 3.

Fig. 3.

Packing diagram of the title compound, viewed down the c axis.

Fig. 4.

Fig. 4.

Packing diagram of the title compound showing the hydrogen bonding.

Crystal data

C9H14N+·I3−·C9H13N Dx = 1.848 Mg m−3
Mr = 652.12 Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P42/n Cell parameters from 9942 reflections
Hall symbol: -P 4bc θ = 2.4–25.6°
a = 11.6862 (4) Å µ = 4.00 mm−1
c = 17.1665 (13) Å T = 293 K
V = 2344.4 (2) Å3 Block, red
Z = 4 0.55 × 0.50 × 0.40 mm
F(000) = 1232

Data collection

Bruker APEXII CCD area-detector diffractometer 2217 independent reflections
Radiation source: fine-focus sealed tube 1758 reflections with I > 2σ(I)
graphite Rint = 0.027
φ and ω scans θmax = 25.6°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2006) h = −14→14
Tmin = 0.217, Tmax = 0.298 k = −14→14
23722 measured reflections l = −20→20

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090 w = 1/[σ2(Fo2) + (0.0303P)2 + 5.5874P] where P = (Fo2 + 2Fc2)/3
S = 1.04 (Δ/σ)max < 0.001
2217 reflections Δρmax = 0.80 e Å−3
119 parameters Δρmin = −0.77 e Å−3
1 restraint Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.00208 (15)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
C1 0.0501 (4) 0.9717 (5) 0.3368 (3) 0.0641 (12)
H1 0.0502 1.0414 0.3107 0.077*
C2 0.1482 (4) 0.9081 (6) 0.3407 (3) 0.0749 (15)
H2 0.2140 0.9358 0.3169 0.090*
C3 0.0595 (5) 0.7687 (5) 0.4119 (3) 0.0694 (14)
H3 0.0625 0.6988 0.4376 0.083*
C4 −0.0414 (4) 0.8291 (4) 0.4105 (3) 0.0608 (12)
H4 −0.1055 0.8001 0.4360 0.073*
C5 −0.0485 (4) 0.9329 (4) 0.3715 (2) 0.0505 (10)
C6 −0.1613 (4) 0.9989 (4) 0.3681 (3) 0.0590 (12)
C7 −0.179 (2) 1.059 (2) 0.2943 (13) 0.099 (7)* 0.33
H7A −0.1554 1.0099 0.2521 0.148* 0.33
H7B −0.1338 1.1273 0.2937 0.148* 0.33
H7C −0.2582 1.0775 0.2886 0.148* 0.33
C8 −0.2650 (16) 0.9078 (16) 0.3731 (13) 0.077 (5)* 0.33
H8A −0.2680 0.8641 0.3258 0.116* 0.33
H8B −0.3359 0.9479 0.3801 0.116* 0.33
H8C −0.2526 0.8573 0.4164 0.116* 0.33
C9 −0.1911 (15) 1.0409 (17) 0.4482 (9) 0.051 (4)* 0.33
H9A −0.1303 1.0882 0.4675 0.076* 0.33
H9B −0.2017 0.9767 0.4823 0.076* 0.33
H9C −0.2606 1.0847 0.4459 0.076* 0.33
C7' −0.144 (2) 1.125 (2) 0.3487 (17) 0.118 (8)* 0.33
H7'1 −0.1136 1.1639 0.3933 0.177* 0.33
H7'2 −0.2159 1.1584 0.3344 0.177* 0.33
H7'3 −0.0912 1.1316 0.3060 0.177* 0.33
C8' −0.230 (2) 0.953 (2) 0.3061 (13) 0.091 (7)* 0.33
H8'1 −0.3007 0.9947 0.3031 0.136* 0.33
H8'2 −0.2453 0.8739 0.3159 0.136* 0.33
H8'3 −0.1894 0.9609 0.2577 0.136* 0.33
C9' −0.2236 (18) 0.9924 (19) 0.4480 (12) 0.085 (6)* 0.33
H9'1 −0.1681 0.9934 0.4892 0.127* 0.33
H9'2 −0.2673 0.9230 0.4507 0.127* 0.33
H9'3 −0.2739 1.0569 0.4534 0.127* 0.33
C8" −0.2550 (14) 0.9235 (14) 0.3301 (12) 0.052 (3)* 0.33
H8"1 −0.3257 0.9653 0.3282 0.078* 0.33
H8"2 −0.2653 0.8553 0.3604 0.078* 0.33
H8"3 −0.2321 0.9033 0.2782 0.078* 0.33
C7" −0.1486 (14) 1.1071 (15) 0.3079 (11) 0.057 (4)* 0.33
H7"1 −0.0932 1.1602 0.3280 0.085* 0.33
H7"2 −0.2212 1.1449 0.3027 0.085* 0.33
H7"3 −0.1240 1.0798 0.2579 0.085* 0.33
C9" −0.1668 (19) 1.0791 (19) 0.4363 (13) 0.085 (7)* 0.33
H9"1 −0.0907 1.1022 0.4504 0.127* 0.33
H9"2 −0.2021 1.0410 0.4796 0.127* 0.33
H9"3 −0.2110 1.1452 0.4224 0.127* 0.33
N1 0.1527 (4) 0.8086 (4) 0.3770 (3) 0.0699 (12)
I1 0.2500 0.2500 0.38499 (3) 0.06646 (18)
I2 0.05632 (4) 0.40649 (4) 0.38862 (3) 0.1013 (2)
H99 0.220 (6) 0.772 (11) 0.381 (5) 0.09 (4)* 0.50

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.060 (3) 0.068 (3) 0.065 (3) −0.004 (2) 0.000 (2) 0.009 (2)
C2 0.048 (3) 0.102 (4) 0.074 (4) −0.002 (3) 0.008 (3) −0.001 (3)
C3 0.067 (3) 0.068 (3) 0.073 (3) 0.013 (3) −0.004 (3) 0.008 (3)
C4 0.055 (3) 0.059 (3) 0.068 (3) 0.001 (2) 0.007 (2) 0.007 (2)
C5 0.050 (2) 0.055 (3) 0.047 (2) 0.0031 (19) −0.0037 (19) −0.0077 (19)
C6 0.057 (3) 0.060 (3) 0.061 (3) 0.014 (2) −0.006 (2) −0.010 (2)
N1 0.053 (3) 0.091 (3) 0.066 (3) 0.020 (2) −0.005 (2) −0.011 (2)
I1 0.0663 (3) 0.0676 (3) 0.0656 (3) 0.0000 (2) 0.000 0.000
I2 0.0790 (3) 0.1007 (4) 0.1243 (4) 0.0253 (2) −0.0064 (3) 0.0184 (3)

Geometric parameters (Å, °)

C1—C2 1.368 (7) C8—H8C 0.9600
C1—C5 1.375 (6) C9—H9A 0.9600
C1—H1 0.9300 C9—H9B 0.9600
C2—N1 1.320 (7) C9—H9C 0.9600
C2—H2 0.9300 C7'—H7'1 0.9600
C3—N1 1.327 (7) C7'—H7'2 0.9600
C3—C4 1.374 (7) C7'—H7'3 0.9600
C3—H3 0.9300 C8'—H8'1 0.9600
C4—C5 1.389 (6) C8'—H8'2 0.9600
C4—H4 0.9300 C8'—H8'3 0.9600
C5—C6 1.528 (6) C9'—H9'1 0.9600
C6—C8' 1.44 (2) C9'—H9'2 0.9600
C6—C7 1.46 (2) C9'—H9'3 0.9600
C6—C9" 1.50 (2) C8"—H8"1 0.9600
C6—C9 1.500 (16) C8"—H8"2 0.9600
C6—C7' 1.52 (3) C8"—H8"3 0.9600
C6—C8" 1.549 (16) C7"—H7"1 0.9600
C6—C9' 1.55 (2) C7"—H7"2 0.9600
C6—C8 1.614 (19) C7"—H7"3 0.9600
C6—C7" 1.641 (17) C9"—H9"1 0.9600
C7—H7A 0.9600 C9"—H9"2 0.9600
C7—H7B 0.9600 C9"—H9"3 0.9600
C7—H7C 0.9600 N1—H99 0.90 (2)
C8—H8A 0.9600 I1—I2i 2.9105 (4)
C8—H8B 0.9600 I1—I2 2.9105 (4)
C2—C1—C5 120.2 (5) H7A—C7—H7C 109.5
C2—C1—H1 119.9 H7B—C7—H7C 109.5
C5—C1—H1 119.9 C6—C8—H8A 109.5
N1—C2—C1 122.4 (5) C6—C8—H8B 109.5
N1—C2—H2 118.8 H8A—C8—H8B 109.5
C1—C2—H2 118.8 C6—C8—H8C 109.5
N1—C3—C4 121.1 (5) H8A—C8—H8C 109.5
N1—C3—H3 119.4 H8B—C8—H8C 109.5
C4—C3—H3 119.4 C6—C9—H9A 109.5
C3—C4—C5 120.5 (5) C6—C9—H9B 109.5
C3—C4—H4 119.7 H9A—C9—H9B 109.5
C5—C4—H4 119.7 C6—C9—H9C 109.5
C1—C5—C4 116.5 (4) H9A—C9—H9C 109.5
C1—C5—C6 122.8 (4) H9B—C9—H9C 109.5
C4—C5—C6 120.7 (4) C6—C7'—H7'1 109.5
C8'—C6—C9" 141.9 (13) C6—C7'—H7'2 109.5
C7—C6—C9" 111.9 (14) H7'1—C7'—H7'2 109.5
C8'—C6—C9 132.2 (12) C6—C7'—H7'3 109.5
C7—C6—C9 127.3 (12) H7'1—C7'—H7'3 109.5
C8'—C6—C7' 105.7 (14) H7'2—C7'—H7'3 109.5
C9"—C6—C7' 64.7 (14) C6—C8'—H8'1 109.5
C9—C6—C7' 85.2 (13) C6—C8'—H8'2 109.5
C8'—C6—C5 108.8 (9) H8'1—C8'—H8'2 109.5
C7—C6—C5 113.2 (10) C6—C8'—H8'3 109.5
C9"—C6—C5 108.8 (9) H8'1—C8'—H8'3 109.5
C9—C6—C5 109.3 (7) H8'2—C8'—H8'3 109.5
C7'—C6—C5 112.3 (11) C6—C9'—H9'1 109.5
C7—C6—C8" 78.9 (12) C6—C9'—H9'2 109.5
C9"—C6—C8" 130.8 (11) H9'1—C9'—H9'2 109.5
C9—C6—C8" 114.0 (11) C6—C9'—H9'3 109.5
C7'—C6—C8" 123.5 (13) H9'1—C9'—H9'3 109.5
C5—C6—C8" 109.8 (6) H9'2—C9'—H9'3 109.5
C8'—C6—C9' 112.1 (14) C6—C8"—H8"1 109.5
C7—C6—C9' 136.4 (12) C6—C8"—H8"2 109.5
C7'—C6—C9' 107.7 (14) H8"1—C8"—H8"2 109.5
C5—C6—C9' 110.2 (8) C6—C8"—H8"3 109.5
C8"—C6—C9' 90.7 (11) H8"1—C8"—H8"3 109.5
C7—C6—C8 104.9 (12) H8"2—C8"—H8"3 109.5
C9"—C6—C8 109.8 (12) C6—C7"—H7"1 109.5
C9—C6—C8 89.6 (11) C6—C7"—H7"2 109.5
C7'—C6—C8 138.5 (13) H7"1—C7"—H7"2 109.5
C5—C6—C8 108.2 (8) C6—C7"—H7"3 109.5
C9'—C6—C8 64.5 (11) H7"1—C7"—H7"3 109.5
C8'—C6—C7" 82.5 (11) H7"2—C7"—H7"3 109.5
C9"—C6—C7" 90.8 (11) C6—C9"—H9"1 109.5
C9—C6—C7" 110.2 (10) C6—C9"—H9"2 109.5
C5—C6—C7" 109.6 (7) H9"1—C9"—H9"2 109.5
C8"—C6—C7" 103.7 (10) C6—C9"—H9"3 109.5
C9'—C6—C7" 129.5 (10) H9"1—C9"—H9"3 109.5
C8—C6—C7" 127.6 (10) H9"2—C9"—H9"3 109.5
C6—C7—H7A 109.5 C2—N1—C3 119.3 (4)
C6—C7—H7B 109.5 C2—N1—H99 120 (9)
H7A—C7—H7B 109.5 C3—N1—H99 121 (9)
C6—C7—H7C 109.5 I2i—I1—I2 177.55 (3)

Symmetry codes: (i) −x+1/2, −y+1/2, z.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N1—H99···N1ii 0.90 1.76 2.655 (7) 172

Symmetry codes: (ii) −x+1/2, −y+3/2, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: SJ5091).

References

  1. Bruker (2006). APEX2, SAINT-NT and SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Campbell, W. M., Burrell, A. K., Officer, D. L. & Jolley, K. W. (2004). Coord. Chem. Rev. 248, 1363–1379.
  3. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  4. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  5. Fialho De Assis, E., Howie, R. A. & Wardell, J. L. (1996). Acta Cryst. C52, 955–957.
  6. Kochel, A. (2006). Acta Cryst. E62, o5605–o5606.
  7. Lee, C.-P., Chen, P.-Y., Vittala, R. & Ho, K.-C. (2010). J. Mater. Chem. 20, 2356–2361.
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  9. Wang, H., Li, H., Xue, B., Wang, Z., Meng, Q. & Chen, L. (2005). J. Am. Chem. Soc. 127, 6394–6401. [DOI] [PubMed]
  10. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811001371/sj5091sup1.cif

e-67-0o434-sup1.cif (18.3KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001371/sj5091Isup2.hkl

e-67-0o434-Isup2.hkl (106.9KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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