Abstract
In the title complex, [CuCl2(C9H12N4)], the CuII atom exhibits a distorted square-planar coordination geometry involving two chloride ions and two N-atom donors from the bipyrazole ligand. The chelate ring including the CuII atom is essentially planar, with a maximum deviation of 0.0181 (17) Å for one of the coordinated N atoms. This plane forms a dihedral angle of 30.75 (6)° with the CuCl2 plane. In the crystal, each pair of adjacent molecules is linked into a centrosymmetric dimer by N—H⋯Cl hydrogen bonds. The crystal structure is stabilized by intermolecular C—H⋯N and C—H⋯Cl hydrogen bonds and weak slipped π–π stacking interactions between symmetry-related molecules, with an interplanar separation of 3.439 (19) Å and a centroid–centroid distance of 3.581 (19) Å.
Related literature
For the preparation of biheterocyclic complexes, see: Juanes et al. (1985 ▶); Arrieta et al. (1998 ▶); El Ghayati et al. (2010 ▶); Cohen-Fernandez et al. (1979 ▶); Tarrago et al. (1980 ▶). For applications of transition metal complexes with biheterocyclic ligands, see: Bekhit & Abdel-Aziem (2004 ▶); Benabdallah et al. (2007 ▶); Das & Mittra (1978 ▶); Sendai et al. (2000 ▶); Attayibat et al. (2006 ▶).
Experimental
Crystal data
[CuCl2(C9H12N4)]
M r = 310.67
Triclinic,
a = 8.5475 (2) Å
b = 9.3475 (3) Å
c = 9.3512 (3) Å
α = 66.379 (2)°
β = 62.876 (1)°
γ = 78.065 (2)°
V = 608.99 (3) Å3
Z = 2
Mo Kα radiation
μ = 2.21 mm−1
T = 296 K
0.26 × 0.16 × 0.08 mm
Data collection
Bruker X8 APEXII area-detector diffractometer
Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.661, T max = 0.838
19588 measured reflections
5535 independent reflections
4468 reflections with I > 2σ(I)
R int = 0.020
Refinement
R[F 2 > 2σ(F 2)] = 0.030
wR(F 2) = 0.096
S = 1.04
5535 reflections
145 parameters
H-atom parameters constrained
Δρmax = 0.78 e Å−3
Δρmin = −0.53 e Å−3
Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia,1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶).
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811004375/fj2386sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811004375/fj2386Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N4—H4⋯Cl1i | 0.86 | 2.38 | 3.1587 (12) | 150 |
| C7—H7B⋯N1ii | 0.96 | 2.61 | 3.483 (2) | 151 |
| C9—H9B⋯Cl1iii | 0.96 | 2.79 | 3.5377 (19) | 135 |
Symmetry codes: (i)
; (ii)
; (iii)
.
Acknowledgments
The authors thank the Unit of Support for Technical and Scientific Research (UATRS, CNRST) for the X-ray measurements.
supplementary crystallographic information
Comment
The 1,1'-bipyrazoles and 3,4'-bipyrazoles have been the subject of several studies (Juanes et al. (1985); Arrieta et al. (1998); El Ghayati et al. (2010). A particular interest has been brought to 1,3'-bipyrazoles which present, contrary to those cited above, a carbon– nitrogen bond between the two pyrazoles (Cohen-Fernandez et al. (1979); Tarrago et al. 1980).
The ability of biheterocycles to form biochemically interesting complexes, with transition metals has prompted several researchers to test them in some areas: medicine (Bekhit & Abdel-Aziem, (2004); Sendai et al. 2000), agriculture (Das & Mittra, 1978) corrosion (Benabdallah et al. 2007) and as extractors of metals such as Cu2+, Cd2+ and Pb2+ (Attayibat et al. 2006). To better understand the interactions between the bipyrazoles and transition metals we have chosen to study some copper complex of bipyrazole possessing a Carbone-nitrogen bond between the two pyrazolics cycles.
The title molecule is built up from two interconnected five-membered rings as schown in Fig.1. Each of the two heterocyclic rings and the linked carbon are almost planar with a maximum deviations of -0.0101 (15) Å and -0.0107 (15) Å from N1 and N3 respectively. The dihedral angle between them is about 3.80 (9)°. The CuII ion is surrounded by two nitrogen atoms belonging to the organic molecule and two chlorides which form a very distorted square planar.The values of adjacent angles around the CuII ions are in the range 78.14 (5)–98.297 (16)° and 151.99 (4)–161.72 (4)° (Table 1), which confirms the distorted square-planar geometry. The chelate ring (N1—N2—C4—N3) and the copper atom are almost planar with a maximum deviations of 0.0181 (17) Å from C4 and build dihedral angle of 30.75 (6)° with the plane through the three ions: CuII+ and two Cl-.
In the crystal, each pair of molecules linked by N4—H4···Cl1 hydrogen bonds form a dimer as schown in Fig.2 and table 2. The structure is held together by weak slipped π-π stacking between symmetry related molecules (N3—N4—C4—C5—C6 rings) with interplanar distance of 3.439 (19) Å and centroid to centroid vector of 3.581 (19) Å (Fig. 2). The crystal structure is also stabilized by an intermolecular C7—H7B···N1 and C9—H9B···Cl1 hydrogen bonds as schown in Fig.2 and Table 2.
Experimental
The title compound was synthesized by mixing a solution of bipyrazole in methanol and an aqueous solution of cupric chloride with ligand/metal ratio of 2. Heating was maintaind for few minutes.Then a pinch of NaCl was added and heating was continued until the solution became clear. After a long time, green crystals were collected and dried over P2O5.
Refinement
The C-bound H atoms were positioned geometrically [C—H = 0.93–0.96 Å] and refined using a riding model with Uiso(H) = 1.2 and 1.5 for methylene and methyl. Reflections 2–43 110, 250, 3–21, 114 and 1–31 were omitted because of the large difference between their calculated and observed intensities.
Figures
Fig. 1.
The asymmetric unit of the title compound, with the atom-labeling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented as small spheres of arbitrary radii.
Fig. 2.
Packing diagram showing hydrogen-bonded (dashed lines) complex molecules and distance between centroids.
Crystal data
| [CuCl2(C9H12N4)] | Z = 2 |
| Mr = 310.67 | F(000) = 314 |
| Triclinic, P1 | Dx = 1.694 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 8.5475 (2) Å | Cell parameters from 5535 reflections |
| b = 9.3475 (3) Å | θ = 2.9–35.5° |
| c = 9.3512 (3) Å | µ = 2.21 mm−1 |
| α = 66.379 (2)° | T = 296 K |
| β = 62.876 (1)° | Prism, clear green |
| γ = 78.065 (2)° | 0.26 × 0.16 × 0.08 mm |
| V = 608.99 (3) Å3 |
Data collection
| Bruker X8 APEXII area-detector diffractometer | 5535 independent reflections |
| Radiation source: fine-focus sealed tube | 4468 reflections with I > 2σ(I) |
| graphite | Rint = 0.020 |
| φ and ω scans | θmax = 35.5°, θmin = 2.9° |
| Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −13→13 |
| Tmin = 0.661, Tmax = 0.838 | k = −15→15 |
| 19588 measured reflections | l = −15→15 |
Refinement
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.096 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.053P)2 + 0.1288P] where P = (Fo2 + 2Fc2)/3 |
| 5535 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.78 e Å−3 |
| 0 restraints | Δρmin = −0.53 e Å−3 |
Special details
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cu1 | 0.15845 (2) | 0.378309 (18) | 0.126139 (19) | 0.03371 (6) | |
| Cl1 | 0.32602 (6) | 0.27845 (5) | −0.07595 (5) | 0.04576 (10) | |
| Cl2 | 0.17371 (7) | 0.63132 (4) | −0.04198 (5) | 0.05123 (11) | |
| N1 | 0.19189 (18) | 0.19578 (13) | 0.32890 (15) | 0.0350 (2) | |
| N2 | 0.06621 (18) | 0.19922 (13) | 0.48517 (14) | 0.0338 (2) | |
| N3 | −0.03865 (17) | 0.41525 (14) | 0.32360 (14) | 0.0341 (2) | |
| N4 | −0.16369 (17) | 0.52865 (15) | 0.34407 (15) | 0.0357 (2) | |
| H4 | −0.1782 | 0.6055 | 0.2609 | 0.043* | |
| C1 | 0.2969 (2) | 0.07094 (17) | 0.3644 (2) | 0.0415 (3) | |
| C2 | 0.2341 (3) | −0.00505 (18) | 0.5432 (2) | 0.0471 (4) | |
| H2 | 0.2824 | −0.0952 | 0.6008 | 0.056* | |
| C3 | 0.0881 (3) | 0.07866 (16) | 0.61715 (19) | 0.0406 (3) | |
| C4 | −0.05733 (19) | 0.32244 (15) | 0.48068 (15) | 0.0304 (2) | |
| C5 | −0.1967 (2) | 0.37413 (18) | 0.60475 (17) | 0.0368 (3) | |
| H5 | −0.2360 | 0.3297 | 0.7234 | 0.044* | |
| C6 | −0.26295 (19) | 0.50668 (17) | 0.51088 (18) | 0.0344 (2) | |
| C7 | −0.4133 (2) | 0.6144 (2) | 0.5670 (2) | 0.0456 (3) | |
| H7A | −0.4235 | 0.6954 | 0.4680 | 0.068* | |
| H7B | −0.3936 | 0.6602 | 0.6326 | 0.068* | |
| H7C | −0.5199 | 0.5571 | 0.6366 | 0.068* | |
| C8 | −0.0262 (4) | 0.0550 (2) | 0.8008 (2) | 0.0576 (5) | |
| H8A | −0.1176 | 0.1347 | 0.8090 | 0.086* | |
| H8B | 0.0429 | 0.0607 | 0.8553 | 0.086* | |
| H8C | −0.0779 | −0.0457 | 0.8567 | 0.086* | |
| C9 | 0.4575 (3) | 0.0306 (3) | 0.2294 (3) | 0.0605 (6) | |
| H9A | 0.4677 | 0.1029 | 0.1184 | 0.091* | |
| H9B | 0.4495 | −0.0735 | 0.2372 | 0.091* | |
| H9C | 0.5591 | 0.0362 | 0.2453 | 0.091* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cu1 | 0.04382 (11) | 0.02877 (8) | 0.02047 (8) | 0.00351 (6) | −0.00980 (7) | −0.00738 (5) |
| Cl1 | 0.0559 (2) | 0.04221 (17) | 0.02692 (14) | 0.01764 (15) | −0.01377 (14) | −0.01382 (13) |
| Cl2 | 0.0665 (3) | 0.03027 (15) | 0.03254 (17) | −0.00083 (15) | −0.00632 (17) | −0.00494 (12) |
| N1 | 0.0460 (7) | 0.0321 (5) | 0.0255 (5) | 0.0042 (4) | −0.0167 (5) | −0.0094 (4) |
| N2 | 0.0466 (7) | 0.0307 (5) | 0.0221 (4) | −0.0015 (4) | −0.0159 (4) | −0.0052 (4) |
| N3 | 0.0410 (6) | 0.0351 (5) | 0.0211 (4) | 0.0044 (4) | −0.0124 (4) | −0.0083 (4) |
| N4 | 0.0386 (6) | 0.0383 (5) | 0.0261 (5) | 0.0048 (4) | −0.0128 (4) | −0.0112 (4) |
| C1 | 0.0589 (10) | 0.0325 (6) | 0.0408 (7) | 0.0091 (6) | −0.0303 (7) | −0.0141 (5) |
| C2 | 0.0759 (12) | 0.0306 (6) | 0.0423 (8) | 0.0058 (6) | −0.0376 (8) | −0.0085 (5) |
| C3 | 0.0649 (10) | 0.0296 (5) | 0.0295 (6) | −0.0066 (6) | −0.0262 (7) | −0.0023 (5) |
| C4 | 0.0375 (6) | 0.0313 (5) | 0.0207 (5) | −0.0060 (4) | −0.0111 (4) | −0.0062 (4) |
| C5 | 0.0420 (7) | 0.0409 (6) | 0.0217 (5) | −0.0071 (5) | −0.0074 (5) | −0.0096 (5) |
| C6 | 0.0332 (6) | 0.0398 (6) | 0.0288 (6) | −0.0058 (5) | −0.0075 (5) | −0.0147 (5) |
| C7 | 0.0378 (8) | 0.0488 (8) | 0.0470 (9) | −0.0006 (6) | −0.0081 (6) | −0.0253 (7) |
| C8 | 0.0937 (16) | 0.0430 (8) | 0.0262 (6) | −0.0065 (9) | −0.0249 (8) | −0.0007 (6) |
| C9 | 0.0735 (14) | 0.0597 (11) | 0.0552 (11) | 0.0337 (10) | −0.0389 (11) | −0.0298 (9) |
Geometric parameters (Å, °)
| Cu1—N3 | 1.9496 (12) | C2—H2 | 0.9300 |
| Cu1—N1 | 2.0707 (11) | C3—C8 | 1.485 (2) |
| Cu1—Cl1 | 2.2106 (4) | C4—C5 | 1.396 (2) |
| Cu1—Cl2 | 2.2456 (4) | C5—C6 | 1.385 (2) |
| N1—C1 | 1.3436 (18) | C5—H5 | 0.9300 |
| N1—N2 | 1.3720 (17) | C6—C7 | 1.488 (2) |
| N2—C3 | 1.3552 (17) | C7—H7A | 0.9600 |
| N2—C4 | 1.3935 (18) | C7—H7B | 0.9600 |
| N3—C4 | 1.3260 (16) | C7—H7C | 0.9600 |
| N3—N4 | 1.3453 (17) | C8—H8A | 0.9600 |
| N4—C6 | 1.3431 (18) | C8—H8B | 0.9600 |
| N4—H4 | 0.8600 | C8—H8C | 0.9600 |
| C1—C2 | 1.406 (2) | C9—H9A | 0.9600 |
| C1—C9 | 1.486 (3) | C9—H9B | 0.9600 |
| C2—C3 | 1.375 (3) | C9—H9C | 0.9600 |
| N3—Cu1—N1 | 78.14 (5) | N3—C4—C5 | 111.28 (12) |
| N3—Cu1—Cl1 | 161.72 (4) | N3—C4—N2 | 114.03 (12) |
| N1—Cu1—Cl1 | 97.11 (3) | C5—C4—N2 | 134.67 (12) |
| N3—Cu1—Cl2 | 93.55 (4) | C6—C5—C4 | 104.26 (12) |
| N1—Cu1—Cl2 | 151.99 (4) | C6—C5—H5 | 127.9 |
| Cl1—Cu1—Cl2 | 98.297 (16) | C4—C5—H5 | 127.9 |
| C1—N1—N2 | 105.58 (12) | N4—C6—C5 | 107.30 (13) |
| C1—N1—Cu1 | 142.15 (11) | N4—C6—C7 | 121.67 (14) |
| N2—N1—Cu1 | 112.27 (8) | C5—C6—C7 | 131.03 (14) |
| C3—N2—N1 | 111.92 (13) | C6—C7—H7A | 109.5 |
| C3—N2—C4 | 132.08 (13) | C6—C7—H7B | 109.5 |
| N1—N2—C4 | 116.00 (10) | H7A—C7—H7B | 109.5 |
| C4—N3—N4 | 105.72 (11) | C6—C7—H7C | 109.5 |
| C4—N3—Cu1 | 119.46 (10) | H7A—C7—H7C | 109.5 |
| N4—N3—Cu1 | 134.50 (9) | H7B—C7—H7C | 109.5 |
| C6—N4—N3 | 111.41 (12) | C3—C8—H8A | 109.5 |
| C6—N4—H4 | 124.3 | C3—C8—H8B | 109.5 |
| N3—N4—H4 | 124.3 | H8A—C8—H8B | 109.5 |
| N1—C1—C2 | 109.39 (15) | C3—C8—H8C | 109.5 |
| N1—C1—C9 | 122.85 (15) | H8A—C8—H8C | 109.5 |
| C2—C1—C9 | 127.70 (14) | H8B—C8—H8C | 109.5 |
| C3—C2—C1 | 107.25 (13) | C1—C9—H9A | 109.5 |
| C3—C2—H2 | 126.4 | C1—C9—H9B | 109.5 |
| C1—C2—H2 | 126.4 | H9A—C9—H9B | 109.5 |
| N2—C3—C2 | 105.86 (14) | C1—C9—H9C | 109.5 |
| N2—C3—C8 | 123.69 (16) | H9A—C9—H9C | 109.5 |
| C2—C3—C8 | 130.41 (15) | H9B—C9—H9C | 109.5 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N4—H4···Cl1i | 0.86 | 2.38 | 3.1587 (12) | 150 |
| C7—H7B···N1ii | 0.96 | 2.61 | 3.483 (2) | 151 |
| C9—H9B···Cl1iii | 0.96 | 2.79 | 3.5377 (19) | 135 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y, −z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: FJ2386).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811004375/fj2386sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536811004375/fj2386Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report


