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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Feb 2;67(Pt 3):o555. doi: 10.1107/S1600536811002881

3-(2,4-Difluoro­anilino)-9-nitro­dibenzo[b,e]oxepin-11(6H)-one

Benjamin Baur a, Dieter Schollmeyer b, Stefan Laufer a,*
PMCID: PMC3052073  PMID: 21522320

Abstract

In the title compound, C20H12F2N2O4, the two benzene rings of the tricyclic unit are oriented at a dihedral angle of 30.6 (1)°. The 2,4-difluoro­anilino residue is oriented at a dihedral angle of 68.2 (1)° with respect to the phen­oxy ring. In the crystal, N—H⋯O hydrogen bonds between the amino group and the carbonyl O atom of the oxepinone ring link the mol­ecules into infinte chains along the c axis.

Related literature

For palladium-catalysed amination reactions of aryl halides with anilines, see: Jensen et al. (2004 ▶). For p38 MAP kinase inhibitors based on dibenzo[b,e]oxepin-11(6H)-one, see: Laufer et al. (2006 ▶).graphic file with name e-67-0o555-scheme1.jpg

Experimental

Crystal data

  • C20H12F2N2O4

  • M r = 382.32

  • Orthorhombic, Inline graphic

  • a = 27.0813 (15) Å

  • b = 13.0411 (8) Å

  • c = 4.5998 (2) Å

  • V = 1624.51 (15) Å3

  • Z = 4

  • Cu Kα radiation

  • μ = 1.08 mm−1

  • T = 193 K

  • 0.47 × 0.24 × 0.12 mm

Data collection

  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: numerical (CORINC; Dräger & Gattow, 1971 ▶) T min = 0.721, T max = 0.882

  • 3417 measured reflections

  • 3010 independent reflections

  • 2924 reflections with I > 2σ(I)

  • R int = 0.051

  • 3 standard reflections every 60 min intensity decay: 3%

Refinement

  • R[F 2 > 2σ(F 2)] = 0.047

  • wR(F 2) = 0.127

  • S = 1.03

  • 3010 reflections

  • 253 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.17 e Å−3

  • Δρmin = −0.20 e Å−3

  • Absolute structure: Flack, (1983 ▶), 1270 Friedel pairs

  • Flack parameter: −0.22 (18)

Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811002881/im2261sup1.cif

e-67-0o555-sup1.cif (21.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002881/im2261Isup2.hkl

e-67-0o555-Isup2.hkl (147.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
N16—H16⋯O25i 0.95 2.32 3.236 (3) 162

Symmetry code: (i) Inline graphic.

supplementary crystallographic information

Comment

Based on dibenzo[b,e]oxepin-11(6H)-one (Laufer et al. 2006) as p38 MAP kinase inhibitors, our intent was to synthesize disubstituted oxepin derivatives. The title compound was synthesized in the course of an ongoing study to increase the solubility of the molecules. The structure of the title compound, at 193 K shows orthorhombic symmetry. The two phenyl rings of the tricyclic unit are oriented at a dihedral angle of 30.6 (1°). The 2,4-difluoroanilino residue is oriented at a dihedral angel of 68.2 (1°) towards the phenoxy ring. The crystal stucture is characterized by an intermolecular hydrogen bond N16–H···O25 (2.32 Å).

Experimental

For the preperation of the title compound a mixture of 200 mg (0.69 mmol) 3-chloro-9-nitrodibenzo[b,e]oxepin-11(6H)-one, 100 mg (0.77 mmol) 2–4-difluoroaniline, 1.00 g (3.07 mmol) Cs2CO3, 45 mg (0.10 mmol) 2-(dicyclohexylphosphino)-2`-4`-6`-triisopropylbiphenyl and 20 mg (0.09 mmol) Pd(OAc)2 in 2 ml absolute tert-butanol and 10 ml absolute 2.4-dioxane was stirred for 1 h at 284 K under an argon atmosphere. The mixture was then filtered and evaporated under reduced pressure. The residue was purified by flash chromatography (SiO2 n-hexane/ethyl acetate 2:1) to get 103 mg (0,27 mmol) of the product as a yellow solid (yield 39 %). Crystals of the title compound were obtained by slow evaporation of diethyl ether and hexane (1:1) at room temperature.

Refinement

Hydrogen atoms attached to carbons were placed at calculated positions with C—H = 0.95 Å (aromatic) or 0.98–0.99 Å (sp3 C-atom). Hydrogen atom attached to nitrogen was located in diff. Fourier maps. All H atoms were refined in the riding-model approximation with isotropic displacement parameters (set at 1.2–1.5 times of the Ueq of the parent atom). The absolute structure was determined on the basis of 1270 Friedel pairs.

Figures

Fig. 1.

Fig. 1.

View of compound I. Displacement ellipsoids are drawn at the 50% probability level.

Crystal data

C20H12F2N2O4 F(000) = 784
Mr = 382.32 Dx = 1.563 Mg m−3
Orthorhombic, Pna21 Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2c -2n Cell parameters from 25 reflections
a = 27.0813 (15) Å θ = 65–69°
b = 13.0411 (8) Å µ = 1.08 mm−1
c = 4.5998 (2) Å T = 193 K
V = 1624.51 (15) Å3 Needle, yellow
Z = 4 0.47 × 0.24 × 0.12 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 2924 reflections with I > 2σ(I)
Radiation source: rotating anode Rint = 0.051
graphite θmax = 69.8°, θmin = 3.3°
ω/2θ scans h = −33→33
Absorption correction: numerical (CORINC; Dräger & Gattow, 1971) k = −15→15
Tmin = 0.721, Tmax = 0.882 l = −5→5
3417 measured reflections 3 standard reflections every 60 min
3010 independent reflections intensity decay: 3%

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047 H-atom parameters constrained
wR(F2) = 0.127 w = 1/[σ2(Fo2) + (0.0989P)2 + 0.3414P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max = 0.023
3010 reflections Δρmax = 0.17 e Å−3
253 parameters Δρmin = −0.20 e Å−3
1 restraint Absolute structure: Flack, (1983), 1270 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: −0.22 (18)

Special details

Experimental. 1H NMR (200 MHz, DMSO-d~6~) δ in p.p.m. 5.32 (s, 2 H), 6.26 (m, 1 H), 6.65 (dd, J=8.65, 1.96 Hz, 1 H), 7.11 (m, 1 H), 7.39 (m, 2 H), 7.82 (m, 1 H), 8.02 (d, J=8.97 Hz, 1 H), 8.41 (dd, J=8.21, 2.53 Hz, 1 H), 8.52 (d, J=2.40 Hz, 1 H), 8.85 (s, NH,1 H).13C NMR (50 MHz, DMSO-d~6~) δ in p.p.m. 72.5, 102.1, 110.5, 116.5, 124.3, 127.0, 130.4, 134.1, 141.1, 142.9, 148.3, 152.9, 163.4, 185.1, C—F not detected.GC/MS, m/z (%) 382 (100, M+), 308 (12), 152 (9), 98 (7), 63 (1).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
O1 0.58864 (5) 0.24963 (11) 0.3890 (3) 0.0240 (3)
C2 0.56177 (7) 0.30020 (15) 0.5965 (4) 0.0215 (4)
C3 0.51656 (8) 0.25513 (16) 0.6587 (5) 0.0242 (4)
H3 0.5068 0.1947 0.5587 0.029*
C4 0.48548 (8) 0.29789 (17) 0.8665 (5) 0.0245 (4)
C5 0.50161 (8) 0.38484 (16) 1.0212 (5) 0.0242 (4)
H5 0.4818 0.4123 1.1728 0.029*
C6 0.54556 (8) 0.42947 (15) 0.9536 (5) 0.0234 (4)
H6 0.5556 0.4882 1.0605 0.028*
C7 0.57698 (7) 0.39218 (15) 0.7306 (4) 0.0216 (4)
C8 0.61655 (7) 0.46277 (15) 0.6377 (4) 0.0222 (4)
C9 0.65513 (7) 0.43587 (15) 0.4150 (5) 0.0215 (4)
C10 0.68194 (8) 0.51865 (17) 0.3032 (5) 0.0248 (4)
H10 0.6752 0.5865 0.3670 0.030*
C11 0.71823 (7) 0.50081 (16) 0.0997 (5) 0.0262 (5)
C12 0.73012 (8) 0.40368 (18) 0.0000 (5) 0.0275 (5)
H12 0.7551 0.3936 −0.1423 0.033*
C13 0.70420 (7) 0.32175 (17) 0.1161 (5) 0.0253 (5)
H13 0.7120 0.2541 0.0550 0.030*
C14 0.66696 (7) 0.33663 (16) 0.3204 (5) 0.0223 (4)
C15 0.64067 (7) 0.24498 (15) 0.4420 (5) 0.0253 (5)
H15A 0.6542 0.1820 0.3525 0.030*
H15B 0.6466 0.2412 0.6541 0.030*
N16 0.43947 (7) 0.25975 (16) 0.9317 (5) 0.0341 (5)
H16 0.4191 0.3040 1.0435 0.041*
C17 0.41597 (8) 0.18098 (18) 0.7713 (5) 0.0287 (5)
C18 0.37502 (8) 0.20134 (19) 0.5998 (6) 0.0352 (5)
H18 0.3631 0.2697 0.5860 0.042*
C19 0.35112 (10) 0.1240 (2) 0.4481 (7) 0.0434 (6)
H19 0.3226 0.1381 0.3345 0.052*
C20 0.36991 (10) 0.0266 (2) 0.4670 (6) 0.0407 (6)
C21 0.41046 (10) 0.00166 (19) 0.6308 (7) 0.0409 (6)
H21 0.4229 −0.0664 0.6384 0.049*
C22 0.43238 (9) 0.0805 (2) 0.7842 (6) 0.0355 (6)
F23 0.34769 (7) −0.04940 (15) 0.3148 (5) 0.0629 (6)
F24 0.47133 (6) 0.05902 (13) 0.9539 (5) 0.0558 (5)
O25 0.61751 (6) 0.55042 (11) 0.7364 (4) 0.0302 (4)
N26 0.74461 (7) 0.58919 (15) −0.0221 (5) 0.0315 (4)
O27 0.73855 (7) 0.67347 (14) 0.0898 (5) 0.0476 (5)
O28 0.77170 (7) 0.57374 (15) −0.2321 (5) 0.0434 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
O1 0.0251 (7) 0.0263 (7) 0.0205 (8) −0.0019 (5) 0.0021 (6) −0.0047 (6)
C2 0.0275 (9) 0.0227 (10) 0.0143 (9) 0.0030 (7) −0.0011 (8) 0.0020 (8)
C3 0.0306 (10) 0.0249 (10) 0.0171 (10) −0.0024 (8) −0.0015 (9) −0.0011 (8)
C4 0.0270 (10) 0.0287 (10) 0.0179 (11) −0.0006 (8) 0.0009 (8) 0.0029 (8)
C5 0.0303 (10) 0.0286 (11) 0.0137 (10) 0.0044 (8) 0.0011 (8) 0.0012 (8)
C6 0.0327 (10) 0.0243 (9) 0.0132 (10) 0.0013 (8) −0.0043 (8) 0.0005 (8)
C7 0.0253 (9) 0.0251 (10) 0.0142 (10) 0.0013 (8) −0.0036 (8) 0.0021 (8)
C8 0.0271 (9) 0.0210 (9) 0.0184 (10) 0.0019 (7) −0.0060 (8) 0.0015 (8)
C9 0.0230 (9) 0.0245 (9) 0.0170 (10) −0.0001 (8) −0.0063 (8) 0.0033 (8)
C10 0.0283 (10) 0.0227 (9) 0.0234 (11) −0.0015 (8) −0.0083 (9) 0.0037 (8)
C11 0.0246 (9) 0.0300 (11) 0.0239 (11) −0.0059 (8) −0.0052 (8) 0.0067 (9)
C12 0.0252 (9) 0.0333 (11) 0.0239 (11) −0.0003 (8) −0.0023 (9) 0.0038 (9)
C13 0.0256 (9) 0.0261 (10) 0.0241 (11) 0.0017 (8) −0.0032 (9) 0.0014 (8)
C14 0.0218 (9) 0.0249 (10) 0.0201 (10) 0.0013 (7) −0.0055 (8) 0.0019 (8)
C15 0.0266 (10) 0.0220 (10) 0.0275 (11) 0.0005 (7) 0.0022 (9) 0.0028 (9)
N16 0.0318 (9) 0.0404 (11) 0.0301 (11) −0.0050 (8) 0.0088 (9) −0.0101 (9)
C17 0.0274 (10) 0.0336 (11) 0.0250 (12) −0.0039 (8) 0.0078 (9) −0.0015 (9)
C18 0.0338 (11) 0.0355 (13) 0.0363 (14) 0.0036 (9) 0.0046 (10) −0.0016 (11)
C19 0.0371 (12) 0.0532 (15) 0.0400 (16) −0.0028 (11) −0.0025 (12) −0.0075 (13)
C20 0.0447 (14) 0.0424 (13) 0.0349 (15) −0.0147 (11) 0.0132 (11) −0.0110 (11)
C21 0.0444 (12) 0.0287 (12) 0.0495 (16) −0.0035 (10) 0.0142 (12) 0.0015 (12)
C22 0.0309 (11) 0.0381 (12) 0.0373 (14) −0.0009 (9) 0.0052 (11) 0.0077 (11)
F23 0.0677 (11) 0.0604 (11) 0.0606 (12) −0.0257 (9) 0.0120 (10) −0.0305 (10)
F24 0.0483 (9) 0.0541 (10) 0.0649 (12) 0.0051 (7) −0.0134 (9) 0.0171 (9)
O25 0.0352 (8) 0.0244 (8) 0.0311 (9) −0.0034 (6) 0.0017 (7) −0.0047 (7)
N26 0.0312 (9) 0.0318 (10) 0.0314 (11) −0.0070 (8) −0.0010 (9) 0.0060 (9)
O27 0.0584 (11) 0.0300 (9) 0.0545 (13) −0.0103 (8) 0.0147 (10) 0.0022 (8)
O28 0.0460 (9) 0.0441 (10) 0.0402 (11) −0.0120 (8) 0.0137 (9) 0.0031 (9)

Geometric parameters (Å, °)

O1—C2 1.370 (2) C12—H12 0.9500
O1—C15 1.431 (3) C13—C14 1.392 (3)
C2—C3 1.388 (3) C13—H13 0.9500
C2—C7 1.410 (3) C14—C15 1.499 (3)
C3—C4 1.390 (3) C15—H15A 0.9900
C3—H3 0.9500 C15—H15B 0.9900
C4—N16 1.375 (3) N16—C17 1.416 (3)
C4—C5 1.408 (3) N16—H16 0.9504
C5—C6 1.361 (3) C17—C18 1.387 (3)
C5—H5 0.9500 C17—C22 1.385 (3)
C6—C7 1.419 (3) C18—C19 1.387 (4)
C6—H6 0.9500 C18—H18 0.9500
C7—C8 1.476 (3) C19—C20 1.371 (4)
C8—O25 1.230 (3) C19—H19 0.9500
C8—C9 1.504 (3) C20—F23 1.355 (3)
C9—C10 1.399 (3) C20—C21 1.371 (4)
C9—C14 1.403 (3) C21—C22 1.381 (4)
C10—C11 1.377 (3) C21—H21 0.9500
C10—H10 0.9500 C22—F24 1.341 (3)
C11—C12 1.385 (3) N26—O27 1.225 (3)
C11—N26 1.467 (3) N26—O28 1.230 (3)
C12—C13 1.385 (3)
C2—O1—C15 115.13 (16) C12—C13—H13 119.3
O1—C2—C3 114.11 (19) C14—C13—H13 119.3
O1—C2—C7 123.99 (18) C13—C14—C9 120.24 (19)
C3—C2—C7 121.85 (19) C13—C14—C15 119.00 (19)
C2—C3—C4 120.4 (2) C9—C14—C15 120.75 (19)
C2—C3—H3 119.8 O1—C15—C14 111.72 (16)
C4—C3—H3 119.8 O1—C15—H15A 109.3
N16—C4—C3 123.6 (2) C14—C15—H15A 109.3
N16—C4—C5 117.53 (19) O1—C15—H15B 109.3
C3—C4—C5 118.85 (19) C14—C15—H15B 109.3
C6—C5—C4 120.02 (19) H15A—C15—H15B 107.9
C6—C5—H5 120.0 C4—N16—C17 123.8 (2)
C4—C5—H5 120.0 C4—N16—H16 115.2
C5—C6—C7 122.89 (19) C17—N16—H16 117.5
C5—C6—H6 118.6 C18—C17—C22 117.5 (2)
C7—C6—H6 118.6 C18—C17—N16 121.1 (2)
C2—C7—C6 115.63 (18) C22—C17—N16 121.3 (2)
C2—C7—C8 128.01 (18) C17—C18—C19 121.4 (2)
C6—C7—C8 115.54 (18) C17—C18—H18 119.3
O25—C8—C7 119.20 (19) C19—C18—H18 119.3
O25—C8—C9 116.95 (18) C20—C19—C18 117.9 (2)
C7—C8—C9 123.78 (18) C20—C19—H19 121.0
C10—C9—C14 118.6 (2) C18—C19—H19 121.0
C10—C9—C8 115.52 (18) F23—C20—C19 118.7 (3)
C14—C9—C8 125.81 (18) F23—C20—C21 117.8 (3)
C11—C10—C9 119.3 (2) C19—C20—C21 123.5 (2)
C11—C10—H10 120.3 C20—C21—C22 116.6 (2)
C9—C10—H10 120.3 C20—C21—H21 121.7
C10—C11—C12 123.1 (2) C22—C21—H21 121.7
C10—C11—N26 118.3 (2) F24—C22—C21 118.7 (2)
C12—C11—N26 118.6 (2) F24—C22—C17 118.3 (2)
C11—C12—C13 117.4 (2) C21—C22—C17 123.0 (2)
C11—C12—H12 121.3 O27—N26—O28 123.8 (2)
C13—C12—H12 121.3 O27—N26—C11 118.7 (2)
C12—C13—C14 121.3 (2) O28—N26—C11 117.5 (2)
C15—O1—C2—C3 −140.97 (18) C12—C13—C14—C9 −0.5 (3)
C15—O1—C2—C7 41.3 (3) C12—C13—C14—C15 −179.1 (2)
O1—C2—C3—C4 179.62 (18) C10—C9—C14—C13 −0.9 (3)
C7—C2—C3—C4 −2.6 (3) C8—C9—C14—C13 −178.83 (19)
C2—C3—C4—N16 177.5 (2) C10—C9—C14—C15 177.64 (19)
C2—C3—C4—C5 −2.8 (3) C8—C9—C14—C15 −0.3 (3)
N16—C4—C5—C6 −176.1 (2) C2—O1—C15—C14 −88.1 (2)
C3—C4—C5—C6 4.2 (3) C13—C14—C15—O1 −121.5 (2)
C4—C5—C6—C7 −0.2 (3) C9—C14—C15—O1 59.9 (3)
O1—C2—C7—C6 −176.19 (18) C3—C4—N16—C17 −8.2 (4)
C3—C2—C7—C6 6.3 (3) C5—C4—N16—C17 172.1 (2)
O1—C2—C7—C8 14.7 (3) C4—N16—C17—C18 −110.1 (3)
C3—C2—C7—C8 −162.8 (2) C4—N16—C17—C22 71.2 (3)
C5—C6—C7—C2 −4.9 (3) C22—C17—C18—C19 0.4 (4)
C5—C6—C7—C8 165.57 (19) N16—C17—C18—C19 −178.4 (2)
C2—C7—C8—O25 162.9 (2) C17—C18—C19—C20 −1.5 (4)
C6—C7—C8—O25 −6.2 (3) C18—C19—C20—F23 −178.5 (2)
C2—C7—C8—C9 −14.0 (3) C18—C19—C20—C21 1.0 (4)
C6—C7—C8—C9 176.95 (17) F23—C20—C21—C22 −179.9 (2)
O25—C8—C9—C10 −11.8 (3) C19—C20—C21—C22 0.6 (4)
C7—C8—C9—C10 165.16 (18) C20—C21—C22—F24 178.1 (2)
O25—C8—C9—C14 166.2 (2) C20—C21—C22—C17 −1.8 (4)
C7—C8—C9—C14 −16.9 (3) C18—C17—C22—F24 −178.6 (2)
C14—C9—C10—C11 1.4 (3) N16—C17—C22—F24 0.1 (3)
C8—C9—C10—C11 179.54 (17) C18—C17—C22—C21 1.3 (4)
C9—C10—C11—C12 −0.6 (3) N16—C17—C22—C21 −179.9 (2)
C9—C10—C11—N26 177.82 (18) C10—C11—N26—O27 10.3 (3)
C10—C11—C12—C13 −0.8 (3) C12—C11—N26—O27 −171.3 (2)
N26—C11—C12—C13 −179.2 (2) C10—C11—N26—O28 −169.8 (2)
C11—C12—C13—C14 1.3 (3) C12—C11—N26—O28 8.7 (3)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N16—H16···O25i 0.95 2.32 3.236 (3) 162

Symmetry codes: (i) −x+1, −y+1, z+1/2.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: IM2261).

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811002881/im2261sup1.cif

e-67-0o555-sup1.cif (21.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002881/im2261Isup2.hkl

e-67-0o555-Isup2.hkl (147.7KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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