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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Feb 19;67(Pt 3):o670. doi: 10.1107/S1600536811005587

2-(2-Methyl-6-phenyl-1-propyl-1,4-dihydro­pyridin-4-yl­idene)propane­dinitrile

Young Hyun Kim a, Hyung Jin Kim a,*, Enkhzul Otgonbaatar b, Chee-Hun Kwak b,*
PMCID: PMC3052154  PMID: 21522419

Abstract

In the title compound, C18H17N3, the dihedral angle between the dihydropyridine and phenyl rings is 72.57 (5)° and that between the dihydropyridine ring and malononitrile plane is 5.19 (20)°. The C—C bond lengths in the pyridine ring are considerably shorter than those of normal single bonds, indicating that electrons on the dihydropyridine ring, including the non-bonding electrons of the N atom, are delocalized on the ring.

Related literature

For the synthesis of the starting material, see: Tolmachev et al. (2006). For a related structure, see: Ha et al. (2009).graphic file with name e-67-0o670-scheme1.jpg

Experimental

Crystal data

  • C18H17N3

  • M r = 275.35

  • Monoclinic, Inline graphic

  • a = 11.5580 (7) Å

  • b = 9.9179 (6) Å

  • c = 13.9268 (7) Å

  • β = 105.707 (2)°

  • V = 1536.83 (15) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.07 mm−1

  • T = 100 K

  • 0.5 × 0.4 × 0.2 mm

Data collection

  • Rigaku R-AXIS RAPID II-S diffractometer

  • Absorption correction: multi-scan (RAPID-AUTO; Rigaku, 2008) T min = 0.966, T max = 0.986

  • 13505 measured reflections

  • 3185 independent reflections

  • 2321 reflections with I > 2σ(I)

  • R int = 0.077

Refinement

  • R[F 2 > 2σ(F 2)] = 0.049

  • wR(F 2) = 0.134

  • S = 1.07

  • 3185 reflections

  • 193 parameters

  • H-atom parameters constrained

  • Δρmax = 0.22 e Å−3

  • Δρmin = −0.20 e Å−3

Data collection: RAPID-AUTO (Rigaku, 2008); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005587/bq2278sup1.cif

e-67-0o670-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005587/bq2278Isup2.hkl

e-67-0o670-Isup2.hkl (153.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

This study was supported financially by Chonnam National University. CHK thanks the RIC, Sunchon National University, for financial support.

supplementary crystallographic information

Comment

Recently we have reported the structure of 2-(1-propyl-2,6-distyryl-1,4-pyridin-4-ylidene)malononitrile as a fluorescent dye (Ha et al., 2009). Continuing our study on the (1,4-pyridin-4-ylidene)malononitrile derivatives, the title compound was synthesized and its structure was confirmed by 1H NMR and X-ray crystal analysis.

In the title compound, C18H17N3, the dihedral angles between the central pyridine and phenyl ring is 72.57 (5)° and that between the pyridine ring and malonitrile plane (N2 C13 C12 C14 N3 plane) is 5.19 (20)°. The bond distances of C—C bonds in the pyridine ring are considerably shorter than those of normal single bonds (D(C1—C2) = D(C1—C5) = 1.413 (3) Å). These results suggest that the electrons on the pyridine ring including non-bonding electrons of N1 are delocalized on the ring (Fig. 1).

Experimental

A mixture of 2-(2-methyl-6-phenyl-4H-pyran-4-ylidene)malononitrile (1.5 g, 6.4 mmol) and n-propylamine (20 ml) was heated at 150 °C for 3 h. The mixture was cooled and concentrated under vacuum. Crude product was recrystallized from MeOH to give crystals suitable for X-ray analysis (1.20 g, 68%). Mp 166–167 °C. 1H NMR (300 MHz, CDCl3) δ 7.52–7.26 (m, 5H, Ph), 6.79 (d, 1H, J = 2.5 Hz, C—CH=C—N), 6.70 (d, 1H, J = 2.5 Hz), 3.75 (t, 2H, J = 8.1 Hz, NCH2CH2CH3), 2.50 (s, 3H, CH3), 1.52 (m, 2H, NCH2CH2CH3), 0.70 (t, 3H, J = 7.4 Hz, NCH2CH2CH3)

Refinement

H atoms were positioned geometrically and allowed to ride on their respective parent atoms [C—H = 0.93 (CH, sp2), 0.96 (CH3), 0.97Å (CH2), respectively and Uiso(H) = 1.2Ueq(C).

Figures

Fig. 1.

Fig. 1.

The structure of the title compound with displacement ellipsoids drawn at the 50% probability level for non-H atoms.

Crystal data

C18H17N3 F(000) = 584
Mr = 275.35 Z = 4
Monoclinic, P21/c Dx = 1.190 Mg m3
Hall symbol: -P 2ybc Mo Kα radiation, λ = 0.71073 Å
a = 11.5580 (7) Å Cell parameters from 15051 reflections
b = 9.9179 (6) Å θ = 27.5–3.0°
c = 13.9268 (7) Å µ = 0.07 mm1
β = 105.707 (2)° T = 100 K
V = 1536.83 (15) Å3 Block, yellow
Z = 4 0.5 × 0.4 × 0.2 mm

Data collection

Rigaku R-AXIS RAPID II-S diffractometer 3185 independent reflections
Radiation source: fine-focus sealed tube 2321 reflections with I > 2σ(I)
graphite Rint = 0.077
ω scans θmax = 26.5°, θmin = 3.0°
Absorption correction: multi-scan (RAPID-AUTO; Rigaku, 2008) h = −14→14
Tmin = 0.966, Tmax = 0.986 k = −12→12
13505 measured reflections l = −16→17

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049 H-atom parameters constrained
wR(F2) = 0.134 w = 1/[σ2(Fo2) + (0.0522P)2 + 0.3213P] where P = (Fo2 + 2Fc2)/3
S = 1.07 (Δ/σ)max < 0.001
3185 reflections Δρmax = 0.22 e Å3
193 parameters Δρmin = −0.20 e Å3
0 restraints Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.013 (3)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
C1 0.86513 (14) 0.37654 (15) 0.41005 (10) 0.0322 (4)
C2 0.94627 (14) 0.43142 (16) 0.36078 (11) 0.0350 (4)
H2 1.0277 0.4120 0.3851 0.042*
C3 0.90918 (14) 0.51234 (16) 0.27834 (11) 0.0345 (4)
C4 0.70719 (14) 0.49082 (15) 0.28609 (10) 0.0311 (4)
C5 0.74344 (14) 0.41302 (16) 0.36931 (11) 0.0332 (4)
H5 0.6864 0.3829 0.4004 0.040*
C6 0.57636 (14) 0.51915 (15) 0.24329 (11) 0.0325 (4)
C7 0.51068 (15) 0.45459 (18) 0.15657 (12) 0.0402 (4)
H7 0.5498 0.3993 0.1214 0.048*
C8 0.38795 (16) 0.4724 (2) 0.12290 (13) 0.0466 (4)
H8 0.3443 0.4281 0.0657 0.056*
C9 0.32989 (16) 0.55609 (19) 0.17404 (13) 0.0467 (5)
H9 0.2473 0.5686 0.1506 0.056*
C10 0.39303 (17) 0.62090 (19) 0.25902 (14) 0.0478 (5)
H10 0.3534 0.6773 0.2931 0.057*
C11 0.51660 (15) 0.60193 (18) 0.29407 (12) 0.0409 (4)
H11 0.5594 0.6452 0.3521 0.049*
C12 0.90262 (14) 0.28936 (16) 0.49335 (11) 0.0357 (4)
C13 0.82087 (16) 0.24072 (17) 0.54461 (12) 0.0399 (4)
C14 1.02361 (17) 0.24658 (18) 0.52802 (12) 0.0436 (4)
C15 0.74831 (15) 0.63071 (16) 0.15180 (11) 0.0366 (4)
H15A 0.6704 0.5997 0.1122 0.044*
H15B 0.8041 0.6235 0.1110 0.044*
C16 0.73834 (19) 0.77697 (18) 0.17897 (12) 0.0481 (5)
H16A 0.8174 0.8115 0.2129 0.058*
H16B 0.6877 0.7844 0.2241 0.058*
C17 0.6847 (2) 0.8605 (2) 0.08532 (15) 0.0669 (6)
H17A 0.6826 0.9537 0.1032 0.100*
H17B 0.6045 0.8298 0.0542 0.100*
H17C 0.7333 0.8503 0.0397 0.100*
C18 0.99893 (17) 0.5697 (2) 0.22903 (14) 0.0500 (5)
H18A 0.9884 0.6655 0.2224 0.075*
H18B 0.9869 0.5300 0.1642 0.075*
H18C 1.0788 0.5500 0.2690 0.075*
N1 0.78979 (11) 0.54168 (13) 0.24021 (9) 0.0320 (3)
N2 0.75433 (16) 0.20179 (18) 0.58685 (12) 0.0569 (5)
N3 1.12223 (16) 0.2122 (2) 0.55469 (12) 0.0672 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0369 (9) 0.0294 (8) 0.0286 (7) −0.0009 (7) 0.0057 (6) −0.0046 (6)
C2 0.0321 (8) 0.0349 (9) 0.0361 (8) 0.0006 (7) 0.0058 (6) −0.0010 (6)
C3 0.0334 (9) 0.0337 (9) 0.0367 (8) −0.0020 (7) 0.0100 (6) −0.0031 (6)
C4 0.0342 (9) 0.0282 (8) 0.0299 (7) −0.0015 (6) 0.0069 (6) −0.0038 (6)
C5 0.0332 (8) 0.0354 (8) 0.0303 (8) −0.0013 (7) 0.0073 (6) −0.0003 (6)
C6 0.0333 (8) 0.0324 (8) 0.0306 (7) 0.0024 (7) 0.0068 (6) 0.0039 (6)
C7 0.0382 (9) 0.0434 (10) 0.0372 (8) 0.0010 (7) 0.0070 (7) −0.0041 (7)
C8 0.0399 (10) 0.0557 (11) 0.0386 (9) −0.0008 (8) 0.0012 (7) 0.0013 (8)
C9 0.0350 (10) 0.0525 (11) 0.0496 (10) 0.0065 (8) 0.0063 (8) 0.0144 (8)
C10 0.0476 (11) 0.0480 (11) 0.0518 (10) 0.0119 (9) 0.0204 (8) 0.0050 (8)
C11 0.0431 (10) 0.0425 (10) 0.0364 (8) 0.0032 (8) 0.0097 (7) −0.0027 (7)
C12 0.0371 (9) 0.0361 (9) 0.0320 (8) 0.0022 (7) 0.0062 (6) 0.0017 (6)
C13 0.0469 (10) 0.0386 (9) 0.0326 (8) 0.0038 (8) 0.0081 (7) 0.0025 (7)
C14 0.0484 (11) 0.0502 (11) 0.0321 (8) 0.0099 (9) 0.0105 (7) 0.0071 (7)
C15 0.0431 (9) 0.0387 (9) 0.0276 (7) 0.0021 (7) 0.0091 (7) 0.0022 (6)
C16 0.0662 (13) 0.0414 (10) 0.0380 (9) 0.0068 (9) 0.0163 (8) 0.0044 (7)
C17 0.0989 (18) 0.0518 (12) 0.0534 (11) 0.0250 (12) 0.0265 (11) 0.0160 (9)
C18 0.0451 (11) 0.0524 (11) 0.0554 (11) −0.0005 (8) 0.0185 (8) 0.0122 (9)
N1 0.0356 (7) 0.0310 (7) 0.0287 (6) 0.0000 (5) 0.0075 (5) 0.0001 (5)
N2 0.0670 (11) 0.0572 (11) 0.0521 (9) 0.0020 (9) 0.0258 (9) 0.0113 (8)
N3 0.0545 (11) 0.0899 (14) 0.0562 (10) 0.0296 (10) 0.0130 (8) 0.0229 (9)

Geometric parameters (Å, °)

C1—C2 1.412 (2) C10—H10 0.9300
C1—C5 1.414 (2) C11—H11 0.9300
C1—C12 1.417 (2) C12—C13 1.414 (2)
C2—C3 1.371 (2) C12—C14 1.415 (2)
C2—H2 0.9300 C13—N2 1.154 (2)
C3—N1 1.369 (2) C14—N3 1.151 (2)
C3—C18 1.502 (2) C15—N1 1.4852 (18)
C4—C5 1.361 (2) C15—C16 1.511 (2)
C4—N1 1.3801 (19) C15—H15A 0.9700
C4—C6 1.494 (2) C15—H15B 0.9700
C5—H5 0.9300 C16—C17 1.527 (2)
C6—C11 1.384 (2) C16—H16A 0.9700
C6—C7 1.396 (2) C16—H16B 0.9700
C7—C8 1.380 (2) C17—H17A 0.9600
C7—H7 0.9300 C17—H17B 0.9600
C8—C9 1.380 (3) C17—H17C 0.9600
C8—H8 0.9300 C18—H18A 0.9600
C9—C10 1.371 (3) C18—H18B 0.9600
C9—H9 0.9300 C18—H18C 0.9600
C10—C11 1.391 (2)
C2—C1—C5 115.20 (13) C13—C12—C14 117.32 (14)
C2—C1—C12 122.45 (14) C13—C12—C1 121.55 (14)
C5—C1—C12 122.34 (14) C14—C12—C1 121.13 (15)
C3—C2—C1 122.29 (15) N2—C13—C12 179.5 (2)
C3—C2—H2 118.9 N3—C14—C12 178.88 (18)
C1—C2—H2 118.9 N1—C15—C16 113.11 (12)
N1—C3—C2 120.21 (14) N1—C15—H15A 109.0
N1—C3—C18 119.37 (14) C16—C15—H15A 109.0
C2—C3—C18 120.42 (15) N1—C15—H15B 109.0
C5—C4—N1 120.64 (14) C16—C15—H15B 109.0
C5—C4—C6 119.44 (13) H15A—C15—H15B 107.8
N1—C4—C6 119.92 (12) C15—C16—C17 110.33 (14)
C4—C5—C1 122.03 (14) C15—C16—H16A 109.6
C4—C5—H5 119.0 C17—C16—H16A 109.6
C1—C5—H5 119.0 C15—C16—H16B 109.6
C11—C6—C7 118.97 (15) C17—C16—H16B 109.6
C11—C6—C4 119.92 (14) H16A—C16—H16B 108.1
C7—C6—C4 120.90 (14) C16—C17—H17A 109.5
C8—C7—C6 120.24 (16) C16—C17—H17B 109.5
C8—C7—H7 119.9 H17A—C17—H17B 109.5
C6—C7—H7 119.9 C16—C17—H17C 109.5
C7—C8—C9 120.04 (16) H17A—C17—H17C 109.5
C7—C8—H8 120.0 H17B—C17—H17C 109.5
C9—C8—H8 120.0 C3—C18—H18A 109.5
C10—C9—C8 120.53 (17) C3—C18—H18B 109.5
C10—C9—H9 119.7 H18A—C18—H18B 109.5
C8—C9—H9 119.7 C3—C18—H18C 109.5
C9—C10—C11 119.70 (16) H18A—C18—H18C 109.5
C9—C10—H10 120.1 H18B—C18—H18C 109.5
C11—C10—H10 120.1 C3—N1—C4 119.59 (12)
C6—C11—C10 120.52 (15) C3—N1—C15 120.88 (13)
C6—C11—H11 119.7 C4—N1—C15 119.51 (13)
C10—C11—H11 119.7
C5—C1—C2—C3 −1.1 (2) C4—C6—C11—C10 −175.04 (15)
C12—C1—C2—C3 177.93 (14) C9—C10—C11—C6 0.6 (3)
C1—C2—C3—N1 −0.6 (2) C2—C1—C12—C13 176.88 (15)
C1—C2—C3—C18 179.35 (15) C5—C1—C12—C13 −4.2 (2)
N1—C4—C5—C1 −2.5 (2) C2—C1—C12—C14 −3.7 (2)
C6—C4—C5—C1 176.43 (14) C5—C1—C12—C14 175.28 (15)
C2—C1—C5—C4 2.6 (2) N1—C15—C16—C17 −174.92 (16)
C12—C1—C5—C4 −176.36 (14) C2—C3—N1—C4 0.9 (2)
C5—C4—C6—C11 69.6 (2) C18—C3—N1—C4 −179.09 (15)
N1—C4—C6—C11 −111.43 (17) C2—C3—N1—C15 179.15 (14)
C5—C4—C6—C7 −105.08 (17) C18—C3—N1—C15 −0.8 (2)
N1—C4—C6—C7 73.9 (2) C5—C4—N1—C3 0.7 (2)
C11—C6—C7—C8 −0.6 (2) C6—C4—N1—C3 −178.28 (13)
C4—C6—C7—C8 174.15 (15) C5—C4—N1—C15 −177.62 (13)
C6—C7—C8—C9 1.1 (3) C6—C4—N1—C15 3.4 (2)
C7—C8—C9—C10 −0.7 (3) C16—C15—N1—C3 −93.10 (18)
C8—C9—C10—C11 −0.1 (3) C16—C15—N1—C4 85.16 (18)
C7—C6—C11—C10 −0.2 (2)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BQ2278).

References

  1. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.
  2. Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838.
  3. Ha, K., Heo, J. & Kim, H. J. (2009). Acta Cryst. E65, o3131. [DOI] [PMC free article] [PubMed]
  4. Rigaku (2008). RAPID-AUTO Rigaku Corporation, Tokyo, Japan.
  5. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  6. Tolmachev, A. I., Kachkovskii, A. D., Kudinova, M. A., Kurdiukov, V. V., Ksenzov, S. & Schrader, S. (2006). Dyes Pigm. 74, 348–356.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811005587/bq2278sup1.cif

e-67-0o670-sup1.cif (18.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811005587/bq2278Isup2.hkl

e-67-0o670-Isup2.hkl (153.1KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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