Abstract
Exposure of pyrimidines of DNA to ionizing radiation under aerobic conditions or oxidizing agents results in attack on the 5,6 double bond of the pyrimidine ring or on the exocyclic 5-methyl group. The primary product of oxidation of the 5,6 double bond of thymine is thymine glycol, while oxidation of the 5-methyl group yields 5-hydroxymethyluracil. Oxidation of the 5,6 double bond of cytosine yields cytosine glycol, which decomposes to 5-hydroxycytosine, 5-hydroxyuracil and uracil glycol, all of which are repaired in DNA by Escherichia coli endonuclease III. We now describe the products of oxidation of 5-methylcytosine in DNA. Poly(dG-[3H]dmC) was gamma-irradiated or oxidized with hydrogen peroxide in the presence of Fe3+ and ascorbic acid. The oxidized co-polymer was incubated with endonuclease III or 5-hydroxymethyluracil-DNA glycosylase, to determine whether repairable products were formed, or digested to 2'-deoxyribonucleosides, to determine the total complement of oxidative products. Oxidative attack on 5-methylcytosine resulted primarily in formation of thymine glycol. The radiogenic yield of thymine glycol in poly(dG-dmC) was the same as that in poly(dA-dT), demonstrating that 5-methylcytosine residues in DNA were equally susceptible to radiation-induced oxidation as were thymine residues.
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Selected References
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- Ames B. N. Endogenous oxidative DNA damage, aging, and cancer. Free Radic Res Commun. 1989;7(3-6):121–128. doi: 10.3109/10715768909087933. [DOI] [PubMed] [Google Scholar]
- Ames B. N., Shigenaga M. K., Hagen T. M. Oxidants, antioxidants, and the degenerative diseases of aging. Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):7915–7922. doi: 10.1073/pnas.90.17.7915. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Asahara H., Wistort P. M., Bank J. F., Bakerian R. H., Cunningham R. P. Purification and characterization of Escherichia coli endonuclease III from the cloned nth gene. Biochemistry. 1989 May 16;28(10):4444–4449. doi: 10.1021/bi00436a048. [DOI] [PubMed] [Google Scholar]
- Cannon-Carlson S. V., Gokhale H., Teebor G. W. Purification and characterization of 5-hydroxymethyluracil-DNA glycosylase from calf thymus. Its possible role in the maintenance of methylated cytosine residues. J Biol Chem. 1989 Aug 5;264(22):13306–13312. [PubMed] [Google Scholar]
- Doetsch P. W., Helland D. E., Haseltine W. A. Mechanism of action of a mammalian DNA repair endonuclease. Biochemistry. 1986 Apr 22;25(8):2212–2220. doi: 10.1021/bi00356a054. [DOI] [PubMed] [Google Scholar]
- Evans J., Maccabee M., Hatahet Z., Courcelle J., Bockrath R., Ide H., Wallace S. Thymine ring saturation and fragmentation products: lesion bypass, misinsertion and implications for mutagenesis. Mutat Res. 1993 May;299(3-4):147–156. doi: 10.1016/0165-1218(93)90092-r. [DOI] [PubMed] [Google Scholar]
- Feig D. I., Sowers L. C., Loeb L. A. Reverse chemical mutagenesis: identification of the mutagenic lesions resulting from reactive oxygen species-mediated damage to DNA. Proc Natl Acad Sci U S A. 1994 Jul 5;91(14):6609–6613. doi: 10.1073/pnas.91.14.6609. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Frenkel K., Cummings A., Solomon J., Cadet J., Steinberg J. J., Teebor G. W. Quantitative determination of the 5-(hydroxymethyl)uracil moiety in the DNA of gamma-irradiated cells. Biochemistry. 1985 Aug 13;24(17):4527–4533. doi: 10.1021/bi00338a007. [DOI] [PubMed] [Google Scholar]
- Frenkel K., Goldstein M. S., Duker N. J., Teebor G. W. Identification of the cis-thymine glycol moiety in oxidized deoxyribonucleic acid. Biochemistry. 1981 Feb 17;20(4):750–754. doi: 10.1021/bi00507a014. [DOI] [PubMed] [Google Scholar]
- Hatahet Z., Kow Y. W., Purmal A. A., Cunningham R. P., Wallace S. S. New substrates for old enzymes. 5-Hydroxy-2'-deoxycytidine and 5-hydroxy-2'-deoxyuridine are substrates for Escherichia coli endonuclease III and formamidopyrimidine DNA N-glycosylase, while 5-hydroxy-2'-deoxyuridine is a substrate for uracil DNA N-glycosylase. J Biol Chem. 1994 Jul 22;269(29):18814–18820. [PubMed] [Google Scholar]
- Higgins S. A., Frenkel K., Cummings A., Teebor G. W. Definitive characterization of human thymine glycol N-glycosylase activity. Biochemistry. 1987 Mar 24;26(6):1683–1688. doi: 10.1021/bi00380a029. [DOI] [PubMed] [Google Scholar]
- Krieg A. M., Yi A. K., Matson S., Waldschmidt T. J., Bishop G. A., Teasdale R., Koretzky G. A., Klinman D. M. CpG motifs in bacterial DNA trigger direct B-cell activation. Nature. 1995 Apr 6;374(6522):546–549. doi: 10.1038/374546a0. [DOI] [PubMed] [Google Scholar]
- Lemaire D. G., Ruzsicska B. P. Kinetic analysis of the deamination reactions of cyclobutane dimers of thymidylyl-3',5'-2'-deoxycytidine and 2'-deoxycytidylyl-3',5'-thymidine. Biochemistry. 1993 Mar 16;32(10):2525–2533. doi: 10.1021/bi00061a009. [DOI] [PubMed] [Google Scholar]
- Lustig M. J., Cadet J., Boorstein R. J., Teebor G. W. Synthesis of the diastereomers of thymidine glycol, determination of concentrations and rates of interconversion of their cis-trans epimers at equilibrium and demonstration of differential alkali lability within DNA. Nucleic Acids Res. 1992 Sep 25;20(18):4839–4845. doi: 10.1093/nar/20.18.4839. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rideout W. M., 3rd, Coetzee G. A., Olumi A. F., Jones P. A. 5-Methylcytosine as an endogenous mutagen in the human LDL receptor and p53 genes. Science. 1990 Sep 14;249(4974):1288–1290. doi: 10.1126/science.1697983. [DOI] [PubMed] [Google Scholar]
- Teebor G. W., Boorstein R. J., Cadet J. The repairability of oxidative free radical mediated damage to DNA: a review. Int J Radiat Biol. 1988 Aug;54(2):131–150. doi: 10.1080/09553008814551591. [DOI] [PubMed] [Google Scholar]
- Teebor G. W., Frenkel K., Goldstein M. S. Ionizing radiation and tritium transmutation both cause formation of 5-hydroxymethyl-2'-deoxyuridine in cellular DNA. Proc Natl Acad Sci U S A. 1984 Jan;81(2):318–321. doi: 10.1073/pnas.81.2.318. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wagner J. R., Hu C. C., Ames B. N. Endogenous oxidative damage of deoxycytidine in DNA. Proc Natl Acad Sci U S A. 1992 Apr 15;89(8):3380–3384. doi: 10.1073/pnas.89.8.3380. [DOI] [PMC free article] [PubMed] [Google Scholar]
