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. 1995 Oct 11;23(19):3989–3994. doi: 10.1093/nar/23.19.3989

Synthesis and biological activities of a phosphorodithioate analog of 2',5'-oligoadenylate.

L Beigelman 1, J Matulic-Adamic 1, P Haeberli 1, N Usman 1, B Dong 1, R H Silverman 1, S Khamnei 1, P F Torrence 1
PMCID: PMC307321  PMID: 7479047

Abstract

To enhance the resistance of 2-5A (pppA2'p5'A2'p5'A) to degradation by exo- and endonucleases, a phosphorodithioate analog was synthesized using a solid-phase phosphite triester approach with N6-benzoyl-5'-O-dimethoxytrityl-3'-O-t-butyldimethylsilyladenosine 2'-[S-(beta-thiobenzoylethyl)-pyrrolidinophosphorothioamidit e]. 5'-Monophosphorylation was accomplished with 2-[2-(4,4'-dimethoxytrityloxy)-ethylsulfonyl]ethyl-(2-cyanoe thyl)-(N,N- diisopropyl)-phosphoramidite. The resulting product, p5'A2'(s2p)- 5'A2'(s2p)5'A, was approximately 10-fold less effective as an activator of purified human recombinant 2-5A-dependent RNase than was 2-5A itself. This loss of activation ability was related directly to the loss of binding ability of the phosphorodiothioate analog. As predicted, p5'A2'(s2p)5'A2' (s2p)5'A was stable to snake venom phosphodiesterase and the nucleolytic activities of both human lymphoblastoid CEM cell extracts and human serum, under conditions that led to facile degradation of parent 2-5A. This nuclease stability permitted the observation of the CEM cell extracts and human serum phosphatase activity which led to 5'-dephosphorylation of p5'A2'(s2p)5'A2'(s2p)5'A.

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Selected References

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  1. Bjergårde K., Dahl O. Solid phase synthesis of oligodeoxyribonucleoside phosphorodithioates from thiophosphoramidites. Nucleic Acids Res. 1991 Nov 11;19(21):5843–5850. doi: 10.1093/nar/19.21.5843. [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Clemens M. J., Williams B. R. Inhibition of cell-free protein synthesis by pppA2'p5'A2'p5'A: a novel oligonucleotide synthesized by interferon-treated L cell extracts. Cell. 1978 Mar;13(3):565–572. doi: 10.1016/0092-8674(78)90329-x. [DOI] [PubMed] [Google Scholar]
  3. Jamoulle J. C., Imai J., Lesiak K., Torrence P. F. Synthesis and biological activity of tubercidin analogues of ppp5'A2'p(5'A2'p)n5'A. Biochemistry. 1984 Jun 19;23(13):3063–3069. doi: 10.1021/bi00308a033. [DOI] [PubMed] [Google Scholar]
  4. Jamoulle J. C., Lesiak K., Torrence P. F. Respective role of each of the purine N7 nitrogens of 5'-O-triphosphoadenylyl(2'----5')adenylyl(2'----5')adenosine in binding to and activation of the RNase L of mouse cells. Biochemistry. 1987 Jan 27;26(2):376–383. doi: 10.1021/bi00376a007. [DOI] [PubMed] [Google Scholar]
  5. Johnston M. I., Hearl W. G. Purification and characterization of a 2'-phosphodiesterase from bovine spleen. J Biol Chem. 1987 Jun 15;262(17):8377–8382. [PubMed] [Google Scholar]
  6. Kerr I. M., Brown R. E. pppA2'p5'A2'p5'A: an inhibitor of protein synthesis synthesized with an enzyme fraction from interferon-treated cells. Proc Natl Acad Sci U S A. 1978 Jan;75(1):256–260. doi: 10.1073/pnas.75.1.256. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Kitade Y., Nakata Y., Hirota K., Maki Y., Pabuccuoglu A., Torrence P. F. 8-Methyladenosine-substituted analogues of 2-5A: synthesis and their biological activities. Nucleic Acids Res. 1991 Aug 11;19(15):4103–4108. doi: 10.1093/nar/19.15.4103. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Knight M., Wreschner D. H., Silverman R. H., Kerr I. M. Radioimmune and radiobinding assays for A2'p5'A2'p5'A, pppA2'p5'A, and related oligonucleotides. Methods Enzymol. 1981;79(Pt B):216–227. [PubMed] [Google Scholar]
  9. Lesiak K., Khamnei S., Torrence P. F. 2',5'-Oligoadenylate:antisense chimeras--synthesis and properties. Bioconjug Chem. 1993 Nov-Dec;4(6):467–472. doi: 10.1021/bc00024a008. [DOI] [PubMed] [Google Scholar]
  10. Lesiak K., Torrence P. F. Purine 8-bromination modulates the ribonuclease L binding and activation abilities of 2',5'-oligoadenylates. Possible influence of glycosyl torsion angle. J Biol Chem. 1987 Feb 15;262(5):1961–1965. [PubMed] [Google Scholar]
  11. Lesiak K., Torrence P. F. Synthesis and biological activities of oligo(8-bromoadenylates) as analogues of 5'-O-triphosphoadenylyl(2'----5')adenylyl(2'----5')adenosine. J Med Chem. 1986 Jun;29(6):1015–1022. doi: 10.1021/jm00156a020. [DOI] [PubMed] [Google Scholar]
  12. Maran A., Maitra R. K., Kumar A., Dong B., Xiao W., Li G., Williams B. R., Torrence P. F., Silverman R. H. Blockage of NF-kappa B signaling by selective ablation of an mRNA target by 2-5A antisense chimeras. Science. 1994 Aug 5;265(5173):789–792. doi: 10.1126/science.7914032. [DOI] [PubMed] [Google Scholar]
  13. Marshall W. S., Caruthers M. H. Phosphorodithioate DNA as a potential therapeutic drug. Science. 1993 Mar 12;259(5101):1564–1570. doi: 10.1126/science.7681216. [DOI] [PubMed] [Google Scholar]
  14. Pestka S., Langer J. A., Zoon K. C., Samuel C. E. Interferons and their actions. Annu Rev Biochem. 1987;56:727–777. doi: 10.1146/annurev.bi.56.070187.003455. [DOI] [PubMed] [Google Scholar]
  15. Salzberg S., Hacohen D., David S., Dovrat S., Ahwan S., Gamliel H., Birnbaum M. Involvement of interferon-system in the regulation of cell growth and differentiation. Scanning Microsc. 1990 Jun;4(2):479–489. [PubMed] [Google Scholar]
  16. Sawai H., Imai J., Lesiak K., Johnston M. I., Torrence P. F. Cordycepin analogues of 2-5A and its derivatives. Chemical synthesis and biological activity. J Biol Chem. 1983 Feb 10;258(3):1671–1677. [PubMed] [Google Scholar]
  17. Scaringe S. A., Francklyn C., Usman N. Chemical synthesis of biologically active oligoribonucleotides using beta-cyanoethyl protected ribonucleoside phosphoramidites. Nucleic Acids Res. 1990 Sep 25;18(18):5433–5441. doi: 10.1093/nar/18.18.5433. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Schmidt A., Chernajovsky Y., Shulman L., Federman P., Berissi H., Revel M. An interferon-induced phosphodiesterase degrading (2'-5') oligoisoadenylate and the C-C-A terminus of tRNA. Proc Natl Acad Sci U S A. 1979 Oct;76(10):4788–4792. doi: 10.1073/pnas.76.10.4788. [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. Sen G. C., Lengyel P. The interferon system. A bird's eye view of its biochemistry. J Biol Chem. 1992 Mar 15;267(8):5017–5020. [PubMed] [Google Scholar]
  20. Silverman R. H. Functional analysis of 2-5A-dependent RNase and 2-5a using 2',5'-oligoadenylate-cellulose. Anal Biochem. 1985 Feb 1;144(2):450–460. doi: 10.1016/0003-2697(85)90141-1. [DOI] [PubMed] [Google Scholar]
  21. Slim G., Gait M. J. Configurationally defined phosphorothioate-containing oligoribonucleotides in the study of the mechanism of cleavage of hammerhead ribozymes. Nucleic Acids Res. 1991 Mar 25;19(6):1183–1188. doi: 10.1093/nar/19.6.1183. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Sobol R. W., Charubala R., Pfleiderer W., Suhadolnik R. J. Chemical synthesis and biological characterization of phosphorothioate analogs of 2', 5'-3'-deoxyadenylate trimer. Nucleic Acids Res. 1993 May 25;21(10):2437–2443. doi: 10.1093/nar/21.10.2437. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Torrence P. F., Brozda D., Alster D., Charubala R., Pfleiderer W. Only one 3'-hydroxyl group of ppp5' A2'p5'A2'p5' A (2-5A) is required for activation of the 2-5A-dependent endonuclease. J Biol Chem. 1988 Jan 25;263(3):1131–1139. [PubMed] [Google Scholar]
  24. Torrence P. F., Maitra R. K., Lesiak K., Khamnei S., Zhou A., Silverman R. H. Targeting RNA for degradation with a (2'-5')oligoadenylate-antisense chimera. Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1300–1304. doi: 10.1073/pnas.90.4.1300. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Zhou A., Hassel B. A., Silverman R. H. Expression cloning of 2-5A-dependent RNAase: a uniquely regulated mediator of interferon action. Cell. 1993 Mar 12;72(5):753–765. doi: 10.1016/0092-8674(93)90403-d. [DOI] [PubMed] [Google Scholar]

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