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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2011 Apr 13;67(Pt 5):m563. doi: 10.1107/S1600536811012281

catena-Poly[[diaqua­bis­(formato-κO)nickel(II)]-μ-2,4,6-tris­(4-pyrid­yl)-1,3,5-triazine-κ2 N 2:N 4]

Miao Feng a, Hui-Juan Tian a, Huai-Feng Mi a,*, Tong-Liang Hu b
PMCID: PMC3089175  PMID: 21754294

Abstract

In the title compound, [Ni(CHO2)2(C18H12N6)(H2O)2]n, the NiII ion, lying on a crystallographic inversion center, has a distorted octa­hedral coordination comprising two water ligands, two O-atom donors from formate ligands and two N-atom donors from the 2,4,6-tris­(4-pyrid­yl)-1,3,5-triazine ligands. These ligands bridge the NiII complex units, forming zigzag chains along the c axis. Adjacent chains are linked by O—H⋯O hydrogen bonds, forming a three-dimensional supra­molecular network.

Related literature

For the structures and properties of coordination compounds with 2,4,6-tris­(4-pyrid­yl)-1,3,5-triazine as a ligand, see: Abrahams et al. (1999 ▶); Barrios et al. (2007 ▶); Batten et al. (1995 ▶); Dybtsev et al. (2004 ▶). 2~2~O ligand should bind through the O atomgraphic file with name e-67-0m563-scheme1.jpg

Experimental

Crystal data

  • [Ni(CHO2)2(C18H12N6)(H2O)2]

  • M r = 497.11

  • Monoclinic, Inline graphic

  • a = 24.725 (5) Å

  • b = 10.969 (2) Å

  • c = 7.4196 (15) Å

  • β = 90.23 (3)°

  • V = 2012.2 (7) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 1.02 mm−1

  • T = 293 K

  • 0.15 × 0.10 × 0.10 mm

Data collection

  • Rigaku SCX-mini diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.836, T max = 1.000

  • 10365 measured reflections

  • 2302 independent reflections

  • 1937 reflections with I > 2σ(I)

  • R int = 0.040

Refinement

  • R[F 2 > 2σ(F 2)] = 0.034

  • wR(F 2) = 0.078

  • S = 1.05

  • 2302 reflections

  • 153 parameters

  • H-atom parameters constrained

  • Δρmax = 0.33 e Å−3

  • Δρmin = −0.28 e Å−3

Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶).

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811012281/bq2289sup1.cif

e-67-0m563-sup1.cif (18.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811012281/bq2289Isup2.hkl

e-67-0m563-Isup2.hkl (113.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A D⋯A D—H⋯A
O3—H6⋯O2i 0.86 1.96 2.818 (2) 177
O3—H7⋯O2ii 0.83 1.95 2.777 (2) 174

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Acknowledgments

This work was supported by the National Natural Science Foundation of China [project approval No. 20974053].

supplementary crystallographic information

Comment

As an interesting polydentate nitrogen donor ligand, 2,4,6-tris(4-pyridyl)-1,3,5-triazine has attracted increasing attention in the synthesis of novel transition metal complexes with novel topology and properties (Abrahams et al., 1999; Dybtsev et al., 2004; Barrios et al., 2007; Batten et al., 1995). Our interest in 2,4,6-tris(4-pyridyl)-1,3,5-triazine transition metal complexes prompts us to report the title compound (I).

As shown in Fig. 1, in the title compound, [Ni(C18H12N6)(H2O)2(HCOO)2]n, the NiII ion, lying on a crystallographic inversion center, has a distorted octahedral coordination sphere comprising two water ligands, two O-atom donors from formate ligands and two N-atom donors from the 2,4,6-tris(4-pyridyl)-1,3,5-triazine ligands. These ligands bridge the NiII complex units to form zigzag chains along c axis (Fig. 2). Adjacent chains are linked by O—H···O hydrogen bonds (Table 1), forming a three-dimensional supramolecular network (Fig. 3).

Experimental

A mixture of Ni(HCOO)2.2H2O (0.15 mmol), 2,4,6-tris(4-pyridyl)-1,3,5-triazine (0.05 mmol), and 10 ml H2O were put in a 23-ml Teflon liner reactor and heated at 413 K in oven for 72 h. The resulting solution was slowly cooled to room temperature to yield single crystals of the title compound.

Refinement

All H atoms were positioned geometrically (C—H = 0.93 Å) and allowed to ride on their parent atoms, with Uiso(H) = 1.2Ueq(parent atom). The H atoms of the water molecules were located in Fourier difference maps and refined isotropically.

Figures

Fig. 1.

Fig. 1.

A fragment of the title compound showing the atom numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. Symmetry codes: (i) (-x, -y, -z + 1.5); (ii) (-x + 1/2, -y + 1.5, -z + 2).

Fig. 2.

Fig. 2.

A view of the title structure along the c axis, showing the zigzag chain.

Fig. 3.

Fig. 3.

The crystal packing of the title compound. O—H···O hydrogen bonds are shown as dashed lines.

Crystal data

[Ni(CHO2)2(C18H12N6)(H2O)2] F(000) = 1024
Mr = 497.11 Dx = 1.641 Mg m−3
Monoclinic, C2/c Mo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2yc Cell parameters from 9569 reflections
a = 24.725 (5) Å θ = 3.1–27.5°
b = 10.969 (2) Å µ = 1.02 mm−1
c = 7.4196 (15) Å T = 293 K
β = 90.23 (3)° Block, green
V = 2012.2 (7) Å3 0.15 × 0.10 × 0.10 mm
Z = 4

Data collection

Rigaku SCX-mini diffractometer 2302 independent reflections
Radiation source: fine-focus sealed tube 1937 reflections with I > 2σ(I)
graphite Rint = 0.040
ω scans θmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) h = −31→32
Tmin = 0.836, Tmax = 1.000 k = −14→14
10365 measured reflections l = −9→9

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078 H-atom parameters constrained
S = 1.05 w = 1/[σ2(Fo2) + (0.0334P)2 + 2.3183P] where P = (Fo2 + 2Fc2)/3
2302 reflections (Δ/σ)max = 0.001
153 parameters Δρmax = 0.33 e Å−3
0 restraints Δρmin = −0.28 e Å−3

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ni1 0.2500 0.7500 1.0000 0.01798 (11)
O1 0.22888 (6) 0.64439 (12) 0.78618 (18) 0.0263 (3)
O2 0.19168 (7) 0.61015 (14) 0.5190 (2) 0.0337 (4)
O3 0.29896 (6) 0.86926 (12) 0.85264 (19) 0.0263 (3)
H6 0.3027 0.9430 0.8884 0.039*
H7 0.3001 0.8711 0.7403 0.039*
N1 0.18044 (6) 0.86186 (14) 0.9633 (2) 0.0204 (4)
N2 0.04510 (7) 1.19452 (15) 0.8071 (2) 0.0251 (4)
N3 0.0000 1.0076 (2) 0.7500 0.0245 (5)
N4 0.0000 1.6408 (2) 0.7500 0.0428 (7)
C1 0.13264 (8) 0.81007 (18) 0.9265 (3) 0.0241 (4)
H1 0.1299 0.7257 0.9355 0.029*
C2 0.08733 (8) 0.87491 (18) 0.8760 (3) 0.0248 (4)
H2 0.0551 0.8349 0.8495 0.030*
C3 0.09060 (8) 1.00126 (18) 0.8654 (3) 0.0210 (4)
C4 0.13930 (8) 1.05662 (18) 0.9086 (3) 0.0239 (4)
H4 0.1427 1.1410 0.9053 0.029*
C5 0.18282 (8) 0.98373 (18) 0.9569 (3) 0.0240 (4)
H5 0.2154 1.0215 0.9864 0.029*
C6 0.04255 (8) 1.07256 (18) 0.8045 (3) 0.0208 (4)
C7 0.0000 1.2503 (3) 0.7500 0.0229 (6)
C8 0.0000 1.3860 (3) 0.7500 0.0252 (6)
C9 −0.04675 (9) 1.4505 (2) 0.7877 (3) 0.0327 (5)
H9 −0.0791 1.4101 0.8097 0.039*
C10 −0.04418 (10) 1.5768 (2) 0.7918 (4) 0.0400 (6)
H10 −0.0750 1.6194 0.8257 0.048*
C11 0.20837 (8) 0.67816 (19) 0.6412 (3) 0.0246 (4)
H11 0.2052 0.7617 0.6226 0.029*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ni1 0.01931 (18) 0.01621 (18) 0.01840 (18) 0.00276 (15) −0.00433 (12) −0.00092 (15)
O1 0.0344 (8) 0.0217 (7) 0.0227 (7) 0.0047 (6) −0.0086 (6) −0.0032 (6)
O2 0.0428 (9) 0.0349 (9) 0.0233 (8) 0.0010 (7) −0.0093 (7) −0.0037 (7)
O3 0.0350 (8) 0.0216 (7) 0.0224 (7) −0.0013 (6) 0.0005 (6) 0.0019 (6)
N1 0.0188 (8) 0.0193 (8) 0.0231 (8) 0.0024 (7) −0.0044 (6) 0.0001 (7)
N2 0.0212 (9) 0.0180 (8) 0.0362 (10) 0.0011 (7) −0.0062 (7) −0.0005 (7)
N3 0.0193 (12) 0.0187 (12) 0.0353 (14) 0.000 −0.0059 (10) 0.000
N4 0.0506 (19) 0.0189 (14) 0.059 (2) 0.000 −0.0079 (15) 0.000
C1 0.0238 (10) 0.0154 (10) 0.0332 (11) −0.0003 (8) −0.0034 (8) 0.0014 (8)
C2 0.0191 (10) 0.0196 (10) 0.0357 (12) −0.0029 (8) −0.0057 (8) 0.0002 (9)
C3 0.0192 (9) 0.0210 (10) 0.0226 (10) 0.0023 (8) −0.0023 (8) −0.0013 (8)
C4 0.0228 (10) 0.0159 (9) 0.0330 (11) 0.0000 (8) −0.0052 (8) −0.0007 (8)
C5 0.0181 (10) 0.0222 (10) 0.0316 (11) −0.0020 (8) −0.0050 (8) −0.0036 (9)
C6 0.0178 (9) 0.0196 (10) 0.0249 (10) 0.0007 (8) −0.0012 (8) −0.0009 (8)
C7 0.0224 (13) 0.0167 (13) 0.0297 (14) 0.000 −0.0021 (11) 0.000
C8 0.0285 (15) 0.0185 (14) 0.0284 (15) 0.000 −0.0066 (12) 0.000
C9 0.0278 (11) 0.0236 (11) 0.0466 (14) 0.0024 (9) −0.0025 (10) 0.0023 (10)
C10 0.0407 (14) 0.0256 (12) 0.0536 (16) 0.0108 (11) −0.0052 (12) −0.0010 (11)
C11 0.0275 (11) 0.0234 (10) 0.0228 (10) 0.0023 (8) −0.0015 (8) 0.0002 (8)

Geometric parameters (Å, °)

Ni1—O1i 2.0309 (14) C1—C2 1.378 (3)
Ni1—O1 2.0309 (14) C1—H1 0.9300
Ni1—O3i 2.0934 (14) C2—C3 1.391 (3)
Ni1—O3 2.0935 (14) C2—H2 0.9300
Ni1—N1 2.1293 (16) C3—C4 1.385 (3)
Ni1—N1i 2.1294 (16) C3—C6 1.491 (3)
O1—C11 1.244 (2) C4—C5 1.387 (3)
O2—C11 1.244 (2) C4—H4 0.9300
O3—H6 0.8557 C5—H5 0.9300
O3—H7 0.8343 C7—N2ii 1.339 (2)
N1—C1 1.338 (3) C7—C8 1.489 (4)
N1—C5 1.339 (3) C8—C9ii 1.385 (3)
N2—C7 1.339 (2) C8—C9 1.385 (3)
N2—C6 1.339 (3) C9—C10 1.387 (3)
N3—C6ii 1.332 (2) C9—H9 0.9300
N3—C6 1.332 (2) C10—H10 0.9300
N4—C10 1.336 (3) C11—H11 0.9300
N4—C10ii 1.336 (3)
O1i—Ni1—O1 180.0 C1—C2—H2 120.6
O1i—Ni1—O3i 95.50 (6) C3—C2—H2 120.6
O1—Ni1—O3i 84.50 (6) C4—C3—C2 118.34 (18)
O1i—Ni1—O3 84.50 (6) C4—C3—C6 122.08 (18)
O1—Ni1—O3 95.50 (6) C2—C3—C6 119.57 (18)
O3i—Ni1—O3 180.0 C3—C4—C5 118.69 (18)
O1i—Ni1—N1 88.64 (6) C3—C4—H4 120.7
O1—Ni1—N1 91.36 (6) C5—C4—H4 120.7
O3i—Ni1—N1 87.62 (6) N1—C5—C4 123.41 (18)
O3—Ni1—N1 92.38 (6) N1—C5—H5 118.3
O1i—Ni1—N1i 91.36 (6) C4—C5—H5 118.3
O1—Ni1—N1i 88.64 (6) N3—C6—N2 125.14 (19)
O3i—Ni1—N1i 92.39 (6) N3—C6—C3 116.04 (18)
O3—Ni1—N1i 87.61 (6) N2—C6—C3 118.82 (17)
N1—Ni1—N1i 180.0 N2ii—C7—N2 125.7 (3)
C11—O1—Ni1 127.47 (13) N2ii—C7—C8 117.17 (13)
Ni1—O3—H6 119.3 N2—C7—C8 117.17 (13)
Ni1—O3—H7 124.0 C9ii—C8—C9 118.5 (3)
H6—O3—H7 106.4 C9ii—C8—C7 120.74 (14)
C1—N1—C5 117.10 (16) C9—C8—C7 120.74 (14)
C1—N1—Ni1 119.57 (13) C8—C9—C10 118.5 (2)
C5—N1—Ni1 122.98 (13) C8—C9—H9 120.8
C7—N2—C6 114.35 (18) C10—C9—H9 120.8
C6ii—N3—C6 115.4 (2) N4—C10—C9 123.8 (2)
C10—N4—C10ii 116.6 (3) N4—C10—H10 118.1
N1—C1—C2 123.56 (18) C9—C10—H10 118.1
N1—C1—H1 118.2 O2—C11—O1 125.8 (2)
C2—C1—H1 118.2 O2—C11—H11 117.1
C1—C2—C3 118.84 (18) O1—C11—H11 117.1
O3i—Ni1—O1—C11 125.73 (18) C3—C4—C5—N1 0.3 (3)
O3—Ni1—O1—C11 −54.27 (18) C6ii—N3—C6—N2 −0.22 (15)
N1—Ni1—O1—C11 38.26 (18) C6ii—N3—C6—C3 −179.8 (2)
N1i—Ni1—O1—C11 −141.74 (18) C7—N2—C6—N3 0.4 (3)
O1i—Ni1—N1—C1 −137.13 (16) C7—N2—C6—C3 180.00 (15)
O1—Ni1—N1—C1 42.87 (16) C4—C3—C6—N3 173.55 (17)
O3i—Ni1—N1—C1 −41.57 (15) C2—C3—C6—N3 −5.0 (3)
O3—Ni1—N1—C1 138.43 (15) C4—C3—C6—N2 −6.1 (3)
O1i—Ni1—N1—C5 49.91 (16) C2—C3—C6—N2 175.33 (19)
O1—Ni1—N1—C5 −130.09 (16) C6—N2—C7—N2ii −0.19 (13)
O3i—Ni1—N1—C5 145.47 (16) C6—N2—C7—C8 179.82 (13)
O3—Ni1—N1—C5 −34.53 (16) N2ii—C7—C8—C9ii −145.57 (15)
C5—N1—C1—C2 2.8 (3) N2—C7—C8—C9ii 34.43 (15)
Ni1—N1—C1—C2 −170.57 (17) N2ii—C7—C8—C9 34.43 (15)
N1—C1—C2—C3 −1.2 (3) N2—C7—C8—C9 −145.57 (15)
C1—C2—C3—C4 −0.9 (3) C9ii—C8—C9—C10 −2.10 (17)
C1—C2—C3—C6 177.77 (19) C7—C8—C9—C10 177.90 (17)
C2—C3—C4—C5 1.3 (3) C10ii—N4—C10—C9 −2.33 (18)
C6—C3—C4—C5 −177.31 (19) C8—C9—C10—N4 4.5 (4)
C1—N1—C5—C4 −2.3 (3) Ni1—O1—C11—O2 −173.47 (16)
Ni1—N1—C5—C4 170.79 (16)

Symmetry codes: (i) −x+1/2, −y+3/2, −z+2; (ii) −x, y, −z+3/2.

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
O3—H6···O2iii 0.86 1.96 2.818 (2) 177
O3—H7···O2iv 0.83 1.95 2.777 (2) 174

Symmetry codes: (iii) −x+1/2, y+1/2, −z+3/2; (iv) −x+1/2, −y+3/2, −z+1.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: BQ2289).

References

  1. Abrahams, B. F., Batten, S. R., Grannas, M. J., Hamit, H., Hoskins, B. F. & Robson, R. (1999). Angew. Chem. Int. Ed. 38, 1475–1477. [DOI] [PubMed]
  2. Barrios, L. A., Ribas, J. & Aromi, G. (2007). Inorg. Chem. 46, 7154–7162. [DOI] [PubMed]
  3. Batten, S. R., Hoskins, B. F. & Robson, R. (1995). Angew. Chem. Int. Ed. 34, 820–822.
  4. Dybtsev, D. N., Chun, H. & Kim, K. (2004). Chem. Commun. pp. 1594–1595. [DOI] [PubMed]
  5. Higashi, T. (1995). ABSCOR Rigaku Corporation, Tokyo, Japan.
  6. Rigaku (1998). PROCESS-AUTO Rigaku Corporation, Tokyo, Japan.
  7. Rigaku/MSC (2002). CrystalStructure Rigaku/MSC, The Woodlands, Texas, USA.
  8. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  9. Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811012281/bq2289sup1.cif

e-67-0m563-sup1.cif (18.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536811012281/bq2289Isup2.hkl

e-67-0m563-Isup2.hkl (113.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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